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2
.github/workflows/build.yml
vendored
2
.github/workflows/build.yml
vendored
@@ -62,7 +62,7 @@ jobs:
|
||||
wget -q https://github.com/postgres/postgres/archive/refs/tags/REL_14_5.tar.gz
|
||||
tar xf REL_14_5.tar.gz
|
||||
- run: make prove_installcheck PROVE_FLAGS="-I ./postgres-REL_14_5/src/test/perl" PERL5LIB="/Users/runner/perl5/lib/perl5"
|
||||
- run: make clean && /usr/local/opt/llvm@15/bin/scan-build --status-bugs make
|
||||
- run: make clean && /usr/local/opt/llvm@15/bin/scan-build --status-bugs make PG_CFLAGS="-DUSE_ASSERT_CHECKING"
|
||||
windows:
|
||||
runs-on: windows-latest
|
||||
if: ${{ !startsWith(github.ref_name, 'mac') }}
|
||||
|
||||
@@ -1,6 +1,10 @@
|
||||
## 0.6.0 (unreleased)
|
||||
## 0.5.2 (unreleased)
|
||||
|
||||
- Added support for sparse vectors
|
||||
- Improved performance of HNSW
|
||||
- Added support for parallel index builds for HNSW
|
||||
- Reduced memory usage for HNSW index builds
|
||||
- Reduced WAL generation for HNSW index builds
|
||||
- Fixed `invalid memory alloc request size` error with HNSW index build
|
||||
|
||||
## 0.5.1 (2023-10-10)
|
||||
|
||||
|
||||
4
Makefile
4
Makefile
@@ -3,8 +3,8 @@ EXTVERSION = 0.5.1
|
||||
|
||||
MODULE_big = vector
|
||||
DATA = $(wildcard sql/*--*.sql)
|
||||
OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/svector.o src/vector.o
|
||||
HEADERS = src/svector.h src/vector.h
|
||||
OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/vector.o
|
||||
HEADERS = src/vector.h
|
||||
|
||||
TESTS = $(wildcard test/sql/*.sql)
|
||||
REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS))
|
||||
|
||||
@@ -1,8 +1,8 @@
|
||||
EXTENSION = vector
|
||||
EXTVERSION = 0.5.1
|
||||
|
||||
OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\svector.obj src\vector.obj
|
||||
HEADERS = src\svector.h src\vector.h
|
||||
OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\vector.obj
|
||||
HEADERS = src\vector.h
|
||||
|
||||
REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged
|
||||
REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)
|
||||
|
||||
213
README.md
213
README.md
@@ -10,7 +10,7 @@ Store your vectors with the rest of your data. Supports:
|
||||
|
||||
Plus [ACID](https://en.wikipedia.org/wiki/ACID) compliance, point-in-time recovery, JOINs, and all of the other [great features](https://www.postgresql.org/about/) of Postgres
|
||||
|
||||
[](https://github.com/pgvector/pgvector/actions)
|
||||
[](https://github.com/pgvector/pgvector/actions)
|
||||
|
||||
## Installation
|
||||
|
||||
@@ -161,8 +161,97 @@ You can add an index to use approximate nearest neighbor search, which trades so
|
||||
|
||||
Supported index types are:
|
||||
|
||||
- [IVFFlat](#ivfflat)
|
||||
- [HNSW](#hnsw) - added in 0.5.0
|
||||
- [IVFFlat](#ivfflat)
|
||||
|
||||
## HNSW
|
||||
|
||||
An HNSW index creates a multilayer graph. It has better query performance than IVFFlat (in terms of speed-recall tradeoff), but has slower build times and uses more memory. Also, an index can be created without any data in the table since there isn’t a training step like IVFFlat.
|
||||
|
||||
Add an index for each distance function you want to use.
|
||||
|
||||
L2 distance
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops);
|
||||
```
|
||||
|
||||
Inner product
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON items USING hnsw (embedding vector_ip_ops);
|
||||
```
|
||||
|
||||
Cosine distance
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON items USING hnsw (embedding vector_cosine_ops);
|
||||
```
|
||||
|
||||
Vectors with up to 2,000 dimensions can be indexed.
|
||||
|
||||
### Index Options
|
||||
|
||||
Specify HNSW parameters
|
||||
|
||||
- `m` - the max number of connections per layer (16 by default)
|
||||
- `ef_construction` - the size of the dynamic candidate list for constructing the graph (64 by default)
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops) WITH (m = 16, ef_construction = 64);
|
||||
```
|
||||
|
||||
A higher value of `ef_construction` provides better recall at the cost of index build time / insert speed.
|
||||
|
||||
### Query Options
|
||||
|
||||
Specify the size of the dynamic candidate list for search (40 by default)
|
||||
|
||||
```sql
|
||||
SET hnsw.ef_search = 100;
|
||||
```
|
||||
|
||||
A higher value provides better recall at the cost of speed.
|
||||
|
||||
Use `SET LOCAL` inside a transaction to set it for a single query
|
||||
|
||||
```sql
|
||||
BEGIN;
|
||||
SET LOCAL hnsw.ef_search = 100;
|
||||
SELECT ...
|
||||
COMMIT;
|
||||
```
|
||||
|
||||
### Index Build Time
|
||||
|
||||
Indexes build significantly faster when the graph fits into `maintenance_work_mem`
|
||||
|
||||
```sql
|
||||
SET maintenance_work_mem = '8GB';
|
||||
```
|
||||
|
||||
A notice is shown when the graph no longer fits
|
||||
|
||||
```text
|
||||
NOTICE: hnsw graph no longer fits into maintenance_work_mem after 100000 tuples
|
||||
DETAIL: Building will take significantly more time.
|
||||
HINT: Increase maintenance_work_mem to speed up builds.
|
||||
```
|
||||
|
||||
Note: Do not set `maintenance_work_mem` so high that it exhausts the memory on the server
|
||||
|
||||
### Indexing Progress
|
||||
|
||||
Check [indexing progress](https://www.postgresql.org/docs/current/progress-reporting.html#CREATE-INDEX-PROGRESS-REPORTING) with Postgres 12+
|
||||
|
||||
```sql
|
||||
SELECT phase, round(100.0 * blocks_done / nullif(blocks_total, 0), 1) AS "%" FROM pg_stat_progress_create_index;
|
||||
```
|
||||
|
||||
The phases for HNSW are:
|
||||
|
||||
1. `initializing`
|
||||
2. `loading tuples`
|
||||
|
||||
## IVFFlat
|
||||
|
||||
@@ -232,75 +321,6 @@ The phases for IVFFlat are:
|
||||
|
||||
Note: `%` is only populated during the `loading tuples` phase
|
||||
|
||||
## HNSW
|
||||
|
||||
An HNSW index creates a multilayer graph. It has slower build times and uses more memory than IVFFlat, but has better query performance (in terms of speed-recall tradeoff). There’s no training step like IVFFlat, so the index can be created without any data in the table.
|
||||
|
||||
Add an index for each distance function you want to use.
|
||||
|
||||
L2 distance
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops);
|
||||
```
|
||||
|
||||
Inner product
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON items USING hnsw (embedding vector_ip_ops);
|
||||
```
|
||||
|
||||
Cosine distance
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON items USING hnsw (embedding vector_cosine_ops);
|
||||
```
|
||||
|
||||
Vectors with up to 2,000 dimensions can be indexed.
|
||||
|
||||
### Index Options
|
||||
|
||||
Specify HNSW parameters
|
||||
|
||||
- `m` - the max number of connections per layer (16 by default)
|
||||
- `ef_construction` - the size of the dynamic candidate list for constructing the graph (64 by default)
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops) WITH (m = 16, ef_construction = 64);
|
||||
```
|
||||
|
||||
### Query Options
|
||||
|
||||
Specify the size of the dynamic candidate list for search (40 by default)
|
||||
|
||||
```sql
|
||||
SET hnsw.ef_search = 100;
|
||||
```
|
||||
|
||||
A higher value provides better recall at the cost of speed.
|
||||
|
||||
Use `SET LOCAL` inside a transaction to set it for a single query
|
||||
|
||||
```sql
|
||||
BEGIN;
|
||||
SET LOCAL hnsw.ef_search = 100;
|
||||
SELECT ...
|
||||
COMMIT;
|
||||
```
|
||||
|
||||
### Indexing Progress
|
||||
|
||||
Check [indexing progress](https://www.postgresql.org/docs/current/progress-reporting.html#CREATE-INDEX-PROGRESS-REPORTING) with Postgres 12+
|
||||
|
||||
```sql
|
||||
SELECT phase, round(100.0 * blocks_done / nullif(blocks_total, 0), 1) AS "%" FROM pg_stat_progress_create_index;
|
||||
```
|
||||
|
||||
The phases for HNSW are:
|
||||
|
||||
1. `initializing`
|
||||
2. `loading tuples`
|
||||
|
||||
## Filtering
|
||||
|
||||
There are a few ways to index nearest neighbor queries with a `WHERE` clause
|
||||
@@ -318,8 +338,7 @@ CREATE INDEX ON items (category_id);
|
||||
Or a [partial index](https://www.postgresql.org/docs/current/indexes-partial.html) on the vector column for approximate search
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON items USING ivfflat (embedding vector_l2_ops) WITH (lists = 100)
|
||||
WHERE (category_id = 123);
|
||||
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops) WHERE (category_id = 123);
|
||||
```
|
||||
|
||||
Use [partitioning](https://www.postgresql.org/docs/current/ddl-partitioning.html) for approximate search on many different values of the `WHERE` columns
|
||||
@@ -369,26 +388,6 @@ To speed up queries with an IVFFlat index, increase the number of inverted lists
|
||||
CREATE INDEX ON items USING ivfflat (embedding vector_l2_ops) WITH (lists = 1000);
|
||||
```
|
||||
|
||||
## Sparse Vectors
|
||||
|
||||
Create a sparse vector column with 10 dimensions
|
||||
|
||||
```sql
|
||||
CREATE TABLE items (id bigserial PRIMARY KEY, embedding svector(10));
|
||||
```
|
||||
|
||||
Insert vectors
|
||||
|
||||
```sql
|
||||
INSERT INTO items (embedding) VALUES ('(0,1),(1,2),(2,3)|10|'), ('(0,4),(1,5),(4,6)|10|');
|
||||
```
|
||||
|
||||
Get the nearest neighbors by L2 distance
|
||||
|
||||
```sql
|
||||
SELECT * FROM items ORDER BY embedding <-> '(0,3),(1,1),(2,2)|10|' LIMIT 5;
|
||||
```
|
||||
|
||||
## Languages
|
||||
|
||||
Use pgvector from any language with a Postgres client. You can even generate and store vectors in one language and query them in another.
|
||||
@@ -397,7 +396,7 @@ Language | Libraries / Examples
|
||||
--- | ---
|
||||
C | [pgvector-c](https://github.com/pgvector/pgvector-c)
|
||||
C++ | [pgvector-cpp](https://github.com/pgvector/pgvector-cpp)
|
||||
C# | [pgvector-dotnet](https://github.com/pgvector/pgvector-dotnet)
|
||||
C#, F#, Visual Basic | [pgvector-dotnet](https://github.com/pgvector/pgvector-dotnet)
|
||||
Crystal | [pgvector-crystal](https://github.com/pgvector/pgvector-crystal)
|
||||
Dart | [pgvector-dart](https://github.com/pgvector/pgvector-dart)
|
||||
Elixir | [pgvector-elixir](https://github.com/pgvector/pgvector-elixir)
|
||||
@@ -406,8 +405,10 @@ Haskell | [pgvector-haskell](https://github.com/pgvector/pgvector-haskell)
|
||||
Java, Kotlin, Groovy, Scala | [pgvector-java](https://github.com/pgvector/pgvector-java)
|
||||
JavaScript, TypeScript | [pgvector-node](https://github.com/pgvector/pgvector-node)
|
||||
Julia | [pgvector-julia](https://github.com/pgvector/pgvector-julia)
|
||||
Lisp | [pgvector-lisp](https://github.com/pgvector/pgvector-lisp)
|
||||
Lua | [pgvector-lua](https://github.com/pgvector/pgvector-lua)
|
||||
Nim | [pgvector-nim](https://github.com/pgvector/pgvector-nim)
|
||||
OCaml | [pgvector-ocaml](https://github.com/pgvector/pgvector-ocaml)
|
||||
Perl | [pgvector-perl](https://github.com/pgvector/pgvector-perl)
|
||||
PHP | [pgvector-php](https://github.com/pgvector/pgvector-php)
|
||||
Python | [pgvector-python](https://github.com/pgvector/pgvector-python)
|
||||
@@ -480,6 +481,14 @@ and query with:
|
||||
SELECT * FROM items ORDER BY embedding::vector(3) <-> '[3,1,2]' LIMIT 5;
|
||||
```
|
||||
|
||||
#### Do indexes need to fit into memory?
|
||||
|
||||
No, but like other index types, you’ll likely see better performance if they do. You can get the size of an index with:
|
||||
|
||||
```sql
|
||||
SELECT pg_size_pretty(pg_relation_size('index_name'));
|
||||
```
|
||||
|
||||
## Troubleshooting
|
||||
|
||||
#### Why isn’t a query using an index?
|
||||
@@ -579,10 +588,10 @@ If compilation fails with `fatal error: postgres.h: No such file or directory`,
|
||||
For Ubuntu and Debian, use:
|
||||
|
||||
```sh
|
||||
sudo apt install postgresql-server-dev-15
|
||||
sudo apt install postgresql-server-dev-16
|
||||
```
|
||||
|
||||
Note: Replace `15` with your Postgres server version
|
||||
Note: Replace `16` with your Postgres server version
|
||||
|
||||
### Windows
|
||||
|
||||
@@ -597,7 +606,7 @@ Note: The exact path will vary depending on your Visual Studio version and editi
|
||||
Then use `nmake` to build:
|
||||
|
||||
```cmd
|
||||
set "PGROOT=C:\Program Files\PostgreSQL\15"
|
||||
set "PGROOT=C:\Program Files\PostgreSQL\16"
|
||||
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
|
||||
cd pgvector
|
||||
nmake /F Makefile.win
|
||||
@@ -647,22 +656,22 @@ pgxn install vector
|
||||
Debian and Ubuntu packages are available from the [PostgreSQL APT Repository](https://wiki.postgresql.org/wiki/Apt). Follow the [setup instructions](https://wiki.postgresql.org/wiki/Apt#Quickstart) and run:
|
||||
|
||||
```sh
|
||||
sudo apt install postgresql-15-pgvector
|
||||
sudo apt install postgresql-16-pgvector
|
||||
```
|
||||
|
||||
Note: Replace `15` with your Postgres server version
|
||||
Note: Replace `16` with your Postgres server version
|
||||
|
||||
### Yum
|
||||
|
||||
RPM packages are available from the [PostgreSQL Yum Repository](https://yum.postgresql.org/). Follow the [setup instructions](https://www.postgresql.org/download/linux/redhat/) for your distribution and run:
|
||||
|
||||
```sh
|
||||
sudo yum install pgvector_15
|
||||
sudo yum install pgvector_16
|
||||
# or
|
||||
sudo dnf install pgvector_15
|
||||
sudo dnf install pgvector_16
|
||||
```
|
||||
|
||||
Note: Replace `15` with your Postgres server version
|
||||
Note: Replace `16` with your Postgres server version
|
||||
|
||||
### conda-forge
|
||||
|
||||
|
||||
@@ -1,79 +0,0 @@
|
||||
-- complain if script is sourced in psql, rather than via CREATE EXTENSION
|
||||
\echo Use "ALTER EXTENSION vector UPDATE TO '0.6.0'" to load this file. \quit
|
||||
|
||||
CREATE TYPE svector;
|
||||
|
||||
CREATE FUNCTION svector_in(cstring, oid, integer) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_out(svector) RETURNS cstring
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_typmod_in(cstring[]) RETURNS integer
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_recv(internal, oid, integer) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_send(svector) RETURNS bytea
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE TYPE svector (
|
||||
INPUT = svector_in,
|
||||
OUTPUT = svector_out,
|
||||
TYPMOD_IN = svector_typmod_in,
|
||||
RECEIVE = svector_recv,
|
||||
SEND = svector_send,
|
||||
STORAGE = external
|
||||
);
|
||||
|
||||
CREATE FUNCTION l2_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION inner_product(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION cosine_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION jaccard_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_jaccard_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_l2_squared_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_negative_inner_product(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector(svector, integer, boolean) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION vector_to_svector(vector, integer, boolean) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_to_vector(svector, integer, boolean) RETURNS vector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE CAST (svector AS svector)
|
||||
WITH FUNCTION svector(svector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
CREATE CAST (svector AS vector)
|
||||
WITH FUNCTION svector_to_vector(svector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
CREATE CAST (vector AS svector)
|
||||
WITH FUNCTION vector_to_svector(vector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
CREATE OPERATOR <-> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = l2_distance,
|
||||
COMMUTATOR = '<->'
|
||||
);
|
||||
|
||||
CREATE OPERATOR <#> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = svector_negative_inner_product,
|
||||
COMMUTATOR = '<#>'
|
||||
);
|
||||
|
||||
CREATE OPERATOR <=> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = cosine_distance,
|
||||
COMMUTATOR = '<=>'
|
||||
);
|
||||
@@ -290,92 +290,3 @@ CREATE OPERATOR CLASS vector_cosine_ops
|
||||
OPERATOR 1 <=> (vector, vector) FOR ORDER BY float_ops,
|
||||
FUNCTION 1 vector_negative_inner_product(vector, vector),
|
||||
FUNCTION 2 vector_norm(vector);
|
||||
|
||||
--- svector type
|
||||
|
||||
CREATE TYPE svector;
|
||||
|
||||
CREATE FUNCTION svector_in(cstring, oid, integer) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_out(svector) RETURNS cstring
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_typmod_in(cstring[]) RETURNS integer
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_recv(internal, oid, integer) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_send(svector) RETURNS bytea
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE TYPE svector (
|
||||
INPUT = svector_in,
|
||||
OUTPUT = svector_out,
|
||||
TYPMOD_IN = svector_typmod_in,
|
||||
RECEIVE = svector_recv,
|
||||
SEND = svector_send,
|
||||
STORAGE = external
|
||||
);
|
||||
|
||||
-- svector functions
|
||||
|
||||
CREATE FUNCTION l2_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION inner_product(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION cosine_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION jaccard_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_jaccard_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
-- svector private functions
|
||||
|
||||
CREATE FUNCTION svector_l2_squared_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_negative_inner_product(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
-- svector cast functions
|
||||
|
||||
CREATE FUNCTION svector(svector, integer, boolean) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION vector_to_svector(vector, integer, boolean) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_to_vector(svector, integer, boolean) RETURNS vector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
-- svector casts
|
||||
|
||||
CREATE CAST (svector AS svector)
|
||||
WITH FUNCTION svector(svector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
CREATE CAST (svector AS vector)
|
||||
WITH FUNCTION svector_to_vector(svector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
CREATE CAST (vector AS svector)
|
||||
WITH FUNCTION vector_to_svector(vector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
-- svector operators
|
||||
|
||||
CREATE OPERATOR <-> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = l2_distance,
|
||||
COMMUTATOR = '<->'
|
||||
);
|
||||
|
||||
CREATE OPERATOR <#> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = svector_negative_inner_product,
|
||||
COMMUTATOR = '<#>'
|
||||
);
|
||||
|
||||
CREATE OPERATOR <=> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = cosine_distance,
|
||||
COMMUTATOR = '<=>'
|
||||
);
|
||||
|
||||
31
src/hnsw.c
31
src/hnsw.c
@@ -14,14 +14,45 @@
|
||||
#endif
|
||||
|
||||
int hnsw_ef_search;
|
||||
int hnsw_lock_tranche_id;
|
||||
static relopt_kind hnsw_relopt_kind;
|
||||
|
||||
/*
|
||||
* Assign a tranche ID for our LWLocks. This only needs to be done by one
|
||||
* backend, as the tranche ID is remembered in shared memory.
|
||||
*
|
||||
* This shared memory area is very small, so we just allocate it from the
|
||||
* "slop" that PostgreSQL reserves for small allocations like this. If
|
||||
* this grows bigger, we should use a shmem_request_hook and
|
||||
* RequestAddinShmemSpace() to pre-reserve space for this.
|
||||
*/
|
||||
static void
|
||||
HnswInitLockTranche(void)
|
||||
{
|
||||
int *tranche_ids;
|
||||
bool found;
|
||||
|
||||
LWLockAcquire(AddinShmemInitLock, LW_EXCLUSIVE);
|
||||
tranche_ids = ShmemInitStruct("hnsw LWLock ids",
|
||||
sizeof(int) * 1,
|
||||
&found);
|
||||
if (!found)
|
||||
tranche_ids[0] = LWLockNewTrancheId();
|
||||
hnsw_lock_tranche_id = tranche_ids[0];
|
||||
LWLockRelease(AddinShmemInitLock);
|
||||
|
||||
/* Per-backend registration of the tranche ID */
|
||||
LWLockRegisterTranche(hnsw_lock_tranche_id, "HnswBuild");
|
||||
}
|
||||
|
||||
/*
|
||||
* Initialize index options and variables
|
||||
*/
|
||||
void
|
||||
HnswInit(void)
|
||||
{
|
||||
HnswInitLockTranche();
|
||||
|
||||
hnsw_relopt_kind = add_reloption_kind();
|
||||
add_int_reloption(hnsw_relopt_kind, "m", "Max number of connections",
|
||||
HNSW_DEFAULT_M, HNSW_MIN_M, HNSW_MAX_M
|
||||
|
||||
214
src/hnsw.h
214
src/hnsw.h
@@ -4,9 +4,11 @@
|
||||
#include "postgres.h"
|
||||
|
||||
#include "access/generic_xlog.h"
|
||||
#include "access/parallel.h"
|
||||
#include "access/reloptions.h"
|
||||
#include "nodes/execnodes.h"
|
||||
#include "port.h" /* for random() */
|
||||
#include "utils/relptr.h"
|
||||
#include "utils/sampling.h"
|
||||
#include "vector.h"
|
||||
|
||||
@@ -14,6 +16,10 @@
|
||||
#error "Requires PostgreSQL 11+"
|
||||
#endif
|
||||
|
||||
#if PG_VERSION_NUM < 120000
|
||||
#include "access/relscan.h"
|
||||
#endif
|
||||
|
||||
#define HNSW_MAX_DIM 2000
|
||||
|
||||
/* Support functions */
|
||||
@@ -59,7 +65,7 @@
|
||||
|
||||
#define HNSW_MAX_SIZE (BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - sizeof(ItemIdData))
|
||||
|
||||
#define HNSW_ELEMENT_TUPLE_SIZE(_dim) MAXALIGN(offsetof(HnswElementTupleData, vec) + VECTOR_SIZE(_dim))
|
||||
#define HNSW_ELEMENT_TUPLE_SIZE(size) MAXALIGN(offsetof(HnswElementTupleData, data) + (size))
|
||||
#define HNSW_NEIGHBOR_TUPLE_SIZE(level, m) MAXALIGN(offsetof(HnswNeighborTupleData, indextids) + ((level) + 2) * (m) * sizeof(ItemPointerData))
|
||||
|
||||
#define HnswPageGetOpaque(page) ((HnswPageOpaque) PageGetSpecialPointer(page))
|
||||
@@ -67,8 +73,10 @@
|
||||
|
||||
#if PG_VERSION_NUM >= 150000
|
||||
#define RandomDouble() pg_prng_double(&pg_global_prng_state)
|
||||
#define SeedRandom(seed) pg_prng_seed(&pg_global_prng_state, seed)
|
||||
#else
|
||||
#define RandomDouble() (((double) random()) / MAX_RANDOM_VALUE)
|
||||
#define SeedRandom(seed) srandom(seed)
|
||||
#endif
|
||||
|
||||
#if PG_VERSION_NUM < 130000
|
||||
@@ -86,31 +94,64 @@
|
||||
#define HnswGetMl(m) (1 / log(m))
|
||||
|
||||
/* Ensure fits on page and in uint8 */
|
||||
#define HnswGetMaxLevel(m) Min(((BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - offsetof(HnswNeighborTupleData, indextids) - sizeof(ItemIdData)) / (sizeof(ItemPointerData)) / m) - 2, 255)
|
||||
#define HnswGetMaxLevel(m) Min(((BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - offsetof(HnswNeighborTupleData, indextids) - sizeof(ItemIdData)) / (sizeof(ItemPointerData)) / (m)) - 2, 255)
|
||||
|
||||
#define HnswGetValue(base, element) PointerGetDatum(HnswPtrAccess(base, (element)->value))
|
||||
|
||||
#if PG_VERSION_NUM < 140005
|
||||
#define relptr_offset(rp) ((rp).relptr_off - 1)
|
||||
#endif
|
||||
|
||||
/* Pointer macros */
|
||||
#define HnswPtrAccess(base, hp) ((base) == NULL ? (hp).ptr : relptr_access(base, (hp).relptr))
|
||||
#define HnswPtrStore(base, hp, value) ((base) == NULL ? (void) ((hp).ptr = (value)) : (void) relptr_store(base, (hp).relptr, value))
|
||||
#define HnswPtrIsNull(base, hp) ((base) == NULL ? (hp).ptr == NULL : relptr_is_null((hp).relptr))
|
||||
#define HnswPtrEqual(base, hp1, hp2) ((base) == NULL ? (hp1).ptr == (hp2).ptr : relptr_offset((hp1).relptr) == relptr_offset((hp2).relptr))
|
||||
|
||||
/* For code paths dedicated to each type */
|
||||
#define HnswPtrPointer(hp) (hp).ptr
|
||||
#define HnswPtrOffset(hp) relptr_offset((hp).relptr)
|
||||
|
||||
/* Variables */
|
||||
extern int hnsw_ef_search;
|
||||
extern int hnsw_lock_tranche_id;
|
||||
|
||||
typedef struct HnswElementData HnswElementData;
|
||||
typedef struct HnswNeighborArray HnswNeighborArray;
|
||||
|
||||
#define HnswPtrDeclare(type, relptrtype, ptrtype) \
|
||||
relptr_declare(type, relptrtype); \
|
||||
typedef union { type *ptr; relptrtype relptr; } ptrtype;
|
||||
|
||||
/* Pointers that can be absolute or relative */
|
||||
/* Use char for DatumPtr so works with Pointer */
|
||||
HnswPtrDeclare(HnswElementData, HnswElementRelptr, HnswElementPtr);
|
||||
HnswPtrDeclare(HnswNeighborArray, HnswNeighborArrayRelptr, HnswNeighborArrayPtr);
|
||||
HnswPtrDeclare(HnswNeighborArrayPtr, HnswNeighborsRelptr, HnswNeighborsPtr);
|
||||
HnswPtrDeclare(char, DatumRelptr, DatumPtr);
|
||||
|
||||
typedef struct HnswElementData
|
||||
{
|
||||
List *heaptids;
|
||||
HnswElementPtr next;
|
||||
ItemPointerData heaptids[HNSW_HEAPTIDS];
|
||||
uint8 heaptidsLength;
|
||||
uint8 level;
|
||||
uint8 deleted;
|
||||
HnswNeighborArray *neighbors;
|
||||
uint32 hash;
|
||||
HnswNeighborsPtr neighbors;
|
||||
BlockNumber blkno;
|
||||
OffsetNumber offno;
|
||||
OffsetNumber neighborOffno;
|
||||
BlockNumber neighborPage;
|
||||
Vector *vec;
|
||||
DatumPtr value;
|
||||
LWLock lock;
|
||||
} HnswElementData;
|
||||
|
||||
typedef HnswElementData * HnswElement;
|
||||
|
||||
typedef struct HnswCandidate
|
||||
{
|
||||
HnswElement element;
|
||||
HnswElementPtr element;
|
||||
float distance;
|
||||
bool closer;
|
||||
} HnswCandidate;
|
||||
@@ -119,7 +160,7 @@ typedef struct HnswNeighborArray
|
||||
{
|
||||
int length;
|
||||
bool closerSet;
|
||||
HnswCandidate *items;
|
||||
HnswCandidate items[FLEXIBLE_ARRAY_MEMBER];
|
||||
} HnswNeighborArray;
|
||||
|
||||
typedef struct HnswPairingHeapNode
|
||||
@@ -136,6 +177,70 @@ typedef struct HnswOptions
|
||||
int efConstruction; /* size of dynamic candidate list */
|
||||
} HnswOptions;
|
||||
|
||||
typedef struct HnswGraph
|
||||
{
|
||||
/* Graph state */
|
||||
slock_t lock;
|
||||
HnswElementPtr head;
|
||||
double indtuples;
|
||||
|
||||
/* Entry state */
|
||||
LWLock entryLock;
|
||||
HnswElementPtr entryPoint;
|
||||
|
||||
/* Allocations state */
|
||||
LWLock allocatorLock;
|
||||
long memoryUsed;
|
||||
long memoryTotal;
|
||||
|
||||
/* Flushed state */
|
||||
LWLock flushLock;
|
||||
bool flushed;
|
||||
} HnswGraph;
|
||||
|
||||
typedef struct HnswShared
|
||||
{
|
||||
/* Immutable state */
|
||||
Oid heaprelid;
|
||||
Oid indexrelid;
|
||||
bool isconcurrent;
|
||||
|
||||
/* Worker progress */
|
||||
ConditionVariable workersdonecv;
|
||||
|
||||
/* Mutex for mutable state */
|
||||
slock_t mutex;
|
||||
|
||||
/* Mutable state */
|
||||
int nparticipantsdone;
|
||||
double reltuples;
|
||||
HnswGraph graphData;
|
||||
|
||||
#if PG_VERSION_NUM < 120000
|
||||
ParallelHeapScanDescData heapdesc; /* must come last */
|
||||
#endif
|
||||
} HnswShared;
|
||||
|
||||
#if PG_VERSION_NUM >= 120000
|
||||
#define ParallelTableScanFromHnswShared(shared) \
|
||||
(ParallelTableScanDesc) ((char *) (shared) + BUFFERALIGN(sizeof(HnswShared)))
|
||||
#endif
|
||||
|
||||
typedef struct HnswLeader
|
||||
{
|
||||
ParallelContext *pcxt;
|
||||
int nparticipanttuplesorts;
|
||||
HnswShared *hnswshared;
|
||||
Snapshot snapshot;
|
||||
char *hnswarea;
|
||||
} HnswLeader;
|
||||
|
||||
typedef struct HnswAllocator
|
||||
{
|
||||
void *(*alloc) (Size size, void *state);
|
||||
void *state;
|
||||
} HnswAllocator;
|
||||
|
||||
typedef struct HnswBuildState
|
||||
{
|
||||
/* Info */
|
||||
@@ -159,16 +264,21 @@ typedef struct HnswBuildState
|
||||
Oid collation;
|
||||
|
||||
/* Variables */
|
||||
List *elements;
|
||||
HnswElement entryPoint;
|
||||
HnswGraph graphData;
|
||||
HnswGraph *graph;
|
||||
double ml;
|
||||
int maxLevel;
|
||||
double maxInMemoryElements;
|
||||
bool flushed;
|
||||
Vector *normvec;
|
||||
|
||||
/* Memory */
|
||||
MemoryContext graphCtx;
|
||||
MemoryContext tmpCtx;
|
||||
HnswAllocator allocator;
|
||||
|
||||
/* Parallel builds */
|
||||
HnswLeader *hnswleader;
|
||||
HnswShared *hnswshared;
|
||||
char *hnswarea;
|
||||
} HnswBuildState;
|
||||
|
||||
typedef struct HnswMetaPageData
|
||||
@@ -204,7 +314,7 @@ typedef struct HnswElementTupleData
|
||||
ItemPointerData heaptids[HNSW_HEAPTIDS];
|
||||
ItemPointerData neighbortid;
|
||||
uint16 unused2;
|
||||
Vector vec;
|
||||
Vector data;
|
||||
} HnswElementTupleData;
|
||||
|
||||
typedef HnswElementTupleData * HnswElementTuple;
|
||||
@@ -250,7 +360,7 @@ typedef struct HnswVacuumState
|
||||
Oid collation;
|
||||
|
||||
/* Variables */
|
||||
HTAB *deleted;
|
||||
struct tidhash_hash *deleted;
|
||||
BufferAccessStrategy bas;
|
||||
HnswNeighborTuple ntup;
|
||||
HnswElementData highestPoint;
|
||||
@@ -264,31 +374,29 @@ int HnswGetM(Relation index);
|
||||
int HnswGetEfConstruction(Relation index);
|
||||
FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum);
|
||||
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
||||
void HnswCommitBuffer(Buffer buf, GenericXLogState *state);
|
||||
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
|
||||
void HnswInitPage(Buffer buf, Page page);
|
||||
void HnswInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogState **state);
|
||||
void HnswInit(void);
|
||||
List *HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
|
||||
List *HnswSearchLayer(char *base, Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
|
||||
HnswElement HnswGetEntryPoint(Relation index);
|
||||
void HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint);
|
||||
HnswElement HnswInitElement(ItemPointer tid, int m, double ml, int maxLevel);
|
||||
void HnswFreeElement(HnswElement element);
|
||||
void *HnswAlloc(HnswAllocator * allocator, Size size);
|
||||
HnswElement HnswInitElement(char *base, ItemPointer tid, int m, double ml, int maxLevel, HnswAllocator * alloc);
|
||||
HnswElement HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno);
|
||||
void HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, FmgrInfo *procinfo, Oid collation, int m, int efConstruction, bool existing);
|
||||
HnswElement HnswFindDuplicate(HnswElement e);
|
||||
HnswCandidate *HnswEntryCandidate(HnswElement em, Datum q, Relation rel, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
||||
void HnswUpdateMetaPage(Relation index, int updateEntry, HnswElement entryPoint, BlockNumber insertPage, ForkNumber forkNum);
|
||||
void HnswSetNeighborTuple(HnswNeighborTuple ntup, HnswElement e, int m);
|
||||
void HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint, Relation index, FmgrInfo *procinfo, Oid collation, int m, int efConstruction, bool existing);
|
||||
HnswCandidate *HnswEntryCandidate(char *base, HnswElement em, Datum q, Relation rel, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
||||
void HnswUpdateMetaPage(Relation index, int updateEntry, HnswElement entryPoint, BlockNumber insertPage, ForkNumber forkNum, bool building);
|
||||
void HnswSetNeighborTuple(char *base, HnswNeighborTuple ntup, HnswElement e, int m);
|
||||
void HnswAddHeapTid(HnswElement element, ItemPointer heaptid);
|
||||
void HnswInitNeighbors(HnswElement element, int m);
|
||||
bool HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel);
|
||||
void HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting);
|
||||
void HnswInitNeighbors(char *base, HnswElement element, int m, HnswAllocator * alloc);
|
||||
bool HnswInsertTupleOnDisk(Relation index, Datum value, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel, bool building);
|
||||
void HnswUpdateNeighborsOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting, bool building);
|
||||
void HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec);
|
||||
void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
||||
void HnswSetElementTuple(HnswElementTuple etup, HnswElement element);
|
||||
void HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
|
||||
void HnswSetElementTuple(char *base, HnswElementTuple etup, HnswElement element);
|
||||
void HnswUpdateConnection(char *base, HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
|
||||
void HnswLoadNeighbors(HnswElement element, Relation index, int m);
|
||||
PGDLLEXPORT void HnswParallelBuildMain(dsm_segment *seg, shm_toc *toc);
|
||||
|
||||
/* Index access methods */
|
||||
IndexBuildResult *hnswbuild(Relation heap, Relation index, IndexInfo *indexInfo);
|
||||
@@ -306,4 +414,54 @@ void hnswrescan(IndexScanDesc scan, ScanKey keys, int nkeys, ScanKey orderbys,
|
||||
bool hnswgettuple(IndexScanDesc scan, ScanDirection dir);
|
||||
void hnswendscan(IndexScanDesc scan);
|
||||
|
||||
static inline HnswNeighborArray *
|
||||
HnswGetNeighbors(char *base, HnswElement element, int lc)
|
||||
{
|
||||
HnswNeighborArrayPtr *neighborList = HnswPtrAccess(base, element->neighbors);
|
||||
|
||||
Assert(element->level >= lc);
|
||||
|
||||
return HnswPtrAccess(base, neighborList[lc]);
|
||||
}
|
||||
|
||||
/* Hash tables */
|
||||
typedef struct TidHashEntry
|
||||
{
|
||||
ItemPointerData tid;
|
||||
char status;
|
||||
} TidHashEntry;
|
||||
|
||||
#define SH_PREFIX tidhash
|
||||
#define SH_ELEMENT_TYPE TidHashEntry
|
||||
#define SH_KEY_TYPE ItemPointerData
|
||||
#define SH_SCOPE extern
|
||||
#define SH_DECLARE
|
||||
#include "lib/simplehash.h"
|
||||
|
||||
typedef struct PointerHashEntry
|
||||
{
|
||||
uintptr_t ptr;
|
||||
char status;
|
||||
} PointerHashEntry;
|
||||
|
||||
#define SH_PREFIX pointerhash
|
||||
#define SH_ELEMENT_TYPE PointerHashEntry
|
||||
#define SH_KEY_TYPE uintptr_t
|
||||
#define SH_SCOPE extern
|
||||
#define SH_DECLARE
|
||||
#include "lib/simplehash.h"
|
||||
|
||||
typedef struct OffsetHashEntry
|
||||
{
|
||||
Size offset;
|
||||
char status;
|
||||
} OffsetHashEntry;
|
||||
|
||||
#define SH_PREFIX offsethash
|
||||
#define SH_ELEMENT_TYPE OffsetHashEntry
|
||||
#define SH_KEY_TYPE Size
|
||||
#define SH_SCOPE extern
|
||||
#define SH_DECLARE
|
||||
#include "lib/simplehash.h"
|
||||
|
||||
#endif
|
||||
|
||||
965
src/hnswbuild.c
965
src/hnswbuild.c
File diff suppressed because it is too large
Load Diff
248
src/hnswinsert.c
248
src/hnswinsert.c
@@ -5,6 +5,7 @@
|
||||
#include "hnsw.h"
|
||||
#include "storage/bufmgr.h"
|
||||
#include "storage/lmgr.h"
|
||||
#include "utils/datum.h"
|
||||
#include "utils/memutils.h"
|
||||
|
||||
/*
|
||||
@@ -92,7 +93,7 @@ HnswFreeOffset(Relation index, Buffer buf, Page page, HnswElement element, Size
|
||||
* Add a new page
|
||||
*/
|
||||
static void
|
||||
HnswInsertAppendPage(Relation index, Buffer *nbuf, Page *npage, GenericXLogState *state, Page page)
|
||||
HnswInsertAppendPage(Relation index, Buffer *nbuf, Page *npage, GenericXLogState *state, Page page, bool building)
|
||||
{
|
||||
/* Add a new page */
|
||||
LockRelationForExtension(index, ExclusiveLock);
|
||||
@@ -100,7 +101,11 @@ HnswInsertAppendPage(Relation index, Buffer *nbuf, Page *npage, GenericXLogState
|
||||
UnlockRelationForExtension(index, ExclusiveLock);
|
||||
|
||||
/* Init new page */
|
||||
*npage = GenericXLogRegisterBuffer(state, *nbuf, GENERIC_XLOG_FULL_IMAGE);
|
||||
if (building)
|
||||
*npage = BufferGetPage(*nbuf);
|
||||
else
|
||||
*npage = GenericXLogRegisterBuffer(state, *nbuf, GENERIC_XLOG_FULL_IMAGE);
|
||||
|
||||
HnswInitPage(*nbuf, *npage);
|
||||
|
||||
/* Update previous buffer */
|
||||
@@ -111,7 +116,7 @@ HnswInsertAppendPage(Relation index, Buffer *nbuf, Page *npage, GenericXLogState
|
||||
* Add to element and neighbor pages
|
||||
*/
|
||||
static void
|
||||
WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPage, BlockNumber *updatedInsertPage)
|
||||
AddElementOnDisk(Relation index, HnswElement e, int m, BlockNumber insertPage, BlockNumber *updatedInsertPage, bool building)
|
||||
{
|
||||
Buffer buf;
|
||||
Page page;
|
||||
@@ -123,16 +128,16 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
Size minCombinedSize;
|
||||
HnswElementTuple etup;
|
||||
BlockNumber currentPage = insertPage;
|
||||
int dimensions = e->vec->dim;
|
||||
HnswNeighborTuple ntup;
|
||||
Buffer nbuf;
|
||||
Page npage;
|
||||
OffsetNumber freeOffno = InvalidOffsetNumber;
|
||||
OffsetNumber freeNeighborOffno = InvalidOffsetNumber;
|
||||
BlockNumber newInsertPage = InvalidBlockNumber;
|
||||
char *base = NULL;
|
||||
|
||||
/* Calculate sizes */
|
||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions);
|
||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(VARSIZE_ANY(HnswPtrAccess(base, e->value)));
|
||||
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m);
|
||||
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
|
||||
maxSize = HNSW_MAX_SIZE;
|
||||
@@ -140,11 +145,11 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
|
||||
/* Prepare element tuple */
|
||||
etup = palloc0(etupSize);
|
||||
HnswSetElementTuple(etup, e);
|
||||
HnswSetElementTuple(base, etup, e);
|
||||
|
||||
/* Prepare neighbor tuple */
|
||||
ntup = palloc0(ntupSize);
|
||||
HnswSetNeighborTuple(ntup, e, m);
|
||||
HnswSetNeighborTuple(base, ntup, e, m);
|
||||
|
||||
/* Find a page (or two if needed) to insert the tuples */
|
||||
for (;;)
|
||||
@@ -152,8 +157,16 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
buf = ReadBuffer(index, currentPage);
|
||||
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
||||
|
||||
state = GenericXLogStart(index);
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
if (building)
|
||||
{
|
||||
state = NULL;
|
||||
page = BufferGetPage(buf);
|
||||
}
|
||||
else
|
||||
{
|
||||
state = GenericXLogStart(index);
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
}
|
||||
|
||||
/* Keep track of first page where element at level 0 can fit */
|
||||
if (!BlockNumberIsValid(newInsertPage) && PageGetFreeSpace(page) >= minCombinedSize)
|
||||
@@ -173,7 +186,12 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
if (HnswFreeOffset(index, buf, page, e, ntupSize, &nbuf, &npage, &freeOffno, &freeNeighborOffno, &newInsertPage))
|
||||
{
|
||||
if (nbuf != buf)
|
||||
npage = GenericXLogRegisterBuffer(state, nbuf, 0);
|
||||
{
|
||||
if (building)
|
||||
npage = BufferGetPage(nbuf);
|
||||
else
|
||||
npage = GenericXLogRegisterBuffer(state, nbuf, 0);
|
||||
}
|
||||
|
||||
break;
|
||||
}
|
||||
@@ -182,7 +200,7 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
/* Skip if both tuples can fit on the same page */
|
||||
if (combinedSize > maxSize && PageGetFreeSpace(page) >= etupSize && !BlockNumberIsValid(HnswPageGetOpaque(page)->nextblkno))
|
||||
{
|
||||
HnswInsertAppendPage(index, &nbuf, &npage, state, page);
|
||||
HnswInsertAppendPage(index, &nbuf, &npage, state, page, building);
|
||||
break;
|
||||
}
|
||||
|
||||
@@ -191,7 +209,8 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
if (BlockNumberIsValid(currentPage))
|
||||
{
|
||||
/* Move to next page */
|
||||
GenericXLogAbort(state);
|
||||
if (!building)
|
||||
GenericXLogAbort(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
}
|
||||
else
|
||||
@@ -199,22 +218,33 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
Buffer newbuf;
|
||||
Page newpage;
|
||||
|
||||
HnswInsertAppendPage(index, &newbuf, &newpage, state, page);
|
||||
HnswInsertAppendPage(index, &newbuf, &newpage, state, page, building);
|
||||
|
||||
/* Commit */
|
||||
GenericXLogFinish(state);
|
||||
if (building)
|
||||
MarkBufferDirty(buf);
|
||||
else
|
||||
GenericXLogFinish(state);
|
||||
|
||||
/* Unlock previous buffer */
|
||||
UnlockReleaseBuffer(buf);
|
||||
|
||||
/* Prepare new buffer */
|
||||
state = GenericXLogStart(index);
|
||||
buf = newbuf;
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
if (building)
|
||||
{
|
||||
state = NULL;
|
||||
page = BufferGetPage(buf);
|
||||
}
|
||||
else
|
||||
{
|
||||
state = GenericXLogStart(index);
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
}
|
||||
|
||||
/* Create new page for neighbors if needed */
|
||||
if (PageGetFreeSpace(page) < combinedSize)
|
||||
HnswInsertAppendPage(index, &nbuf, &npage, state, page);
|
||||
HnswInsertAppendPage(index, &nbuf, &npage, state, page, building);
|
||||
else
|
||||
{
|
||||
nbuf = buf;
|
||||
@@ -268,7 +298,14 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
}
|
||||
|
||||
/* Commit */
|
||||
GenericXLogFinish(state);
|
||||
if (building)
|
||||
{
|
||||
MarkBufferDirty(buf);
|
||||
if (nbuf != buf)
|
||||
MarkBufferDirty(nbuf);
|
||||
}
|
||||
else
|
||||
GenericXLogFinish(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
if (nbuf != buf)
|
||||
UnlockReleaseBuffer(nbuf);
|
||||
@@ -302,12 +339,14 @@ ConnectionExists(HnswElement e, HnswNeighborTuple ntup, int startIdx, int lm)
|
||||
* Update neighbors
|
||||
*/
|
||||
void
|
||||
HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting)
|
||||
HnswUpdateNeighborsOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting, bool building)
|
||||
{
|
||||
char *base = NULL;
|
||||
|
||||
for (int lc = e->level; lc >= 0; lc--)
|
||||
{
|
||||
int lm = HnswGetLayerM(m, lc);
|
||||
HnswNeighborArray *neighbors = &e->neighbors[lc];
|
||||
HnswNeighborArray *neighbors = HnswGetNeighbors(base, e, lc);
|
||||
|
||||
for (int i = 0; i < neighbors->length; i++)
|
||||
{
|
||||
@@ -320,11 +359,12 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
||||
Size ntupSize;
|
||||
int idx = -1;
|
||||
int startIdx;
|
||||
OffsetNumber offno = hc->element->neighborOffno;
|
||||
HnswElement neighborElement = HnswPtrAccess(base, hc->element);
|
||||
OffsetNumber offno = neighborElement->neighborOffno;
|
||||
|
||||
/* Get latest neighbors since they may have changed */
|
||||
/* Do not lock yet since selecting neighbors can take time */
|
||||
HnswLoadNeighbors(hc->element, index, m);
|
||||
HnswLoadNeighbors(neighborElement, index, m);
|
||||
|
||||
/*
|
||||
* Could improve performance for vacuuming by checking neighbors
|
||||
@@ -334,17 +374,25 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
||||
*/
|
||||
|
||||
/* Select neighbors */
|
||||
HnswUpdateConnection(e, hc, lm, lc, &idx, index, procinfo, collation);
|
||||
HnswUpdateConnection(NULL, e, hc, lm, lc, &idx, index, procinfo, collation);
|
||||
|
||||
/* New element was not selected as a neighbor */
|
||||
if (idx == -1)
|
||||
continue;
|
||||
|
||||
/* Register page */
|
||||
buf = ReadBuffer(index, hc->element->neighborPage);
|
||||
buf = ReadBuffer(index, neighborElement->neighborPage);
|
||||
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
||||
state = GenericXLogStart(index);
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
if (building)
|
||||
{
|
||||
state = NULL;
|
||||
page = BufferGetPage(buf);
|
||||
}
|
||||
else
|
||||
{
|
||||
state = GenericXLogStart(index);
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
}
|
||||
|
||||
/* Get tuple */
|
||||
itemid = PageGetItemId(page, offno);
|
||||
@@ -352,7 +400,7 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
||||
ntupSize = ItemIdGetLength(itemid);
|
||||
|
||||
/* Calculate index for update */
|
||||
startIdx = (hc->element->level - lc) * m;
|
||||
startIdx = (neighborElement->level - lc) * m;
|
||||
|
||||
/* Check for existing connection */
|
||||
if (checkExisting && ConnectionExists(e, ntup, startIdx, lm))
|
||||
@@ -386,9 +434,12 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||
|
||||
/* Commit */
|
||||
GenericXLogFinish(state);
|
||||
if (building)
|
||||
MarkBufferDirty(buf);
|
||||
else
|
||||
GenericXLogFinish(state);
|
||||
}
|
||||
else
|
||||
else if (!building)
|
||||
GenericXLogAbort(state);
|
||||
|
||||
UnlockReleaseBuffer(buf);
|
||||
@@ -400,23 +451,34 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
||||
* Add a heap TID to an existing element
|
||||
*/
|
||||
static bool
|
||||
HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
|
||||
AddDuplicateOnDisk(Relation index, HnswElement element, HnswElement dup, bool building)
|
||||
{
|
||||
Buffer buf;
|
||||
Page page;
|
||||
GenericXLogState *state;
|
||||
Size etupSize = HNSW_ELEMENT_TUPLE_SIZE(dup->vec->dim);
|
||||
ItemId itemid;
|
||||
HnswElementTuple etup;
|
||||
Size etupSize;
|
||||
int i;
|
||||
|
||||
/* Read page */
|
||||
buf = ReadBuffer(index, dup->blkno);
|
||||
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
||||
state = GenericXLogStart(index);
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
if (building)
|
||||
{
|
||||
state = NULL;
|
||||
page = BufferGetPage(buf);
|
||||
}
|
||||
else
|
||||
{
|
||||
state = GenericXLogStart(index);
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
}
|
||||
|
||||
/* Find space */
|
||||
etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, dup->offno));
|
||||
itemid = PageGetItemId(page, dup->offno);
|
||||
etup = (HnswElementTuple) PageGetItem(page, itemid);
|
||||
etupSize = ItemIdGetLength(itemid);
|
||||
for (i = 0; i < HNSW_HEAPTIDS; i++)
|
||||
{
|
||||
if (!ItemPointerIsValid(&etup->heaptids[i]))
|
||||
@@ -426,82 +488,97 @@ HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
|
||||
/* Either being deleted or we lost our chance to another backend */
|
||||
if (i == 0 || i == HNSW_HEAPTIDS)
|
||||
{
|
||||
GenericXLogAbort(state);
|
||||
if (!building)
|
||||
GenericXLogAbort(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
return false;
|
||||
}
|
||||
|
||||
/* Add heap TID */
|
||||
etup->heaptids[i] = *((ItemPointer) linitial(element->heaptids));
|
||||
etup->heaptids[i] = element->heaptids[0];
|
||||
|
||||
/* Overwrite tuple */
|
||||
if (!PageIndexTupleOverwrite(page, dup->offno, (Item) etup, etupSize))
|
||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||
|
||||
/* Commit */
|
||||
GenericXLogFinish(state);
|
||||
if (building)
|
||||
MarkBufferDirty(buf);
|
||||
else
|
||||
GenericXLogFinish(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
|
||||
return true;
|
||||
}
|
||||
|
||||
/*
|
||||
* Write changes to disk
|
||||
* Find duplicate element
|
||||
*/
|
||||
static bool
|
||||
FindDuplicateOnDisk(Relation index, HnswElement element, bool building)
|
||||
{
|
||||
char *base = NULL;
|
||||
HnswNeighborArray *neighbors = HnswGetNeighbors(base, element, 0);
|
||||
Datum value = HnswGetValue(base, element);
|
||||
|
||||
for (int i = 0; i < neighbors->length; i++)
|
||||
{
|
||||
HnswCandidate *neighbor = &neighbors->items[i];
|
||||
HnswElement neighborElement = HnswPtrAccess(base, neighbor->element);
|
||||
Datum neighborValue = HnswGetValue(base, neighborElement);
|
||||
|
||||
/* Exit early since ordered by distance */
|
||||
if (!datumIsEqual(value, neighborValue, false, -1))
|
||||
return false;
|
||||
|
||||
if (AddDuplicateOnDisk(index, element, neighborElement, building))
|
||||
return true;
|
||||
}
|
||||
|
||||
return false;
|
||||
}
|
||||
|
||||
/*
|
||||
* Update graph on disk
|
||||
*/
|
||||
static void
|
||||
WriteElement(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement element, int m, int efConstruction, HnswElement dup, HnswElement entryPoint)
|
||||
UpdateGraphOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement element, int m, int efConstruction, HnswElement entryPoint, bool building)
|
||||
{
|
||||
BlockNumber newInsertPage = InvalidBlockNumber;
|
||||
|
||||
/* Try to add to existing page */
|
||||
if (dup != NULL)
|
||||
{
|
||||
if (HnswAddDuplicate(index, element, dup))
|
||||
return;
|
||||
}
|
||||
/* Look for duplicate */
|
||||
if (FindDuplicateOnDisk(index, element, building))
|
||||
return;
|
||||
|
||||
/* Write element and neighbor tuples */
|
||||
WriteNewElementPages(index, element, m, GetInsertPage(index), &newInsertPage);
|
||||
/* Add element */
|
||||
AddElementOnDisk(index, element, m, GetInsertPage(index), &newInsertPage, building);
|
||||
|
||||
/* Update insert page if needed */
|
||||
if (BlockNumberIsValid(newInsertPage))
|
||||
HnswUpdateMetaPage(index, 0, NULL, newInsertPage, MAIN_FORKNUM);
|
||||
HnswUpdateMetaPage(index, 0, NULL, newInsertPage, MAIN_FORKNUM, building);
|
||||
|
||||
/* Update neighbors */
|
||||
HnswUpdateNeighborPages(index, procinfo, collation, element, m, false);
|
||||
HnswUpdateNeighborsOnDisk(index, procinfo, collation, element, m, false, building);
|
||||
|
||||
/* Update metapage if needed */
|
||||
/* Update entry point if needed */
|
||||
if (entryPoint == NULL || element->level > entryPoint->level)
|
||||
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_GREATER, element, InvalidBlockNumber, MAIN_FORKNUM);
|
||||
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_GREATER, element, InvalidBlockNumber, MAIN_FORKNUM, building);
|
||||
}
|
||||
|
||||
/*
|
||||
* Insert a tuple into the index
|
||||
*/
|
||||
bool
|
||||
HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel)
|
||||
HnswInsertTupleOnDisk(Relation index, Datum value, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel, bool building)
|
||||
{
|
||||
Datum value;
|
||||
FmgrInfo *normprocinfo;
|
||||
HnswElement entryPoint;
|
||||
HnswElement element;
|
||||
int m;
|
||||
int efConstruction = HnswGetEfConstruction(index);
|
||||
FmgrInfo *procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||
Oid collation = index->rd_indcollation[0];
|
||||
HnswElement dup;
|
||||
LOCKMODE lockmode = ShareLock;
|
||||
|
||||
/* Detoast once for all calls */
|
||||
value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
|
||||
|
||||
/* Normalize if needed */
|
||||
normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC);
|
||||
if (normprocinfo != NULL)
|
||||
{
|
||||
if (!HnswNormValue(normprocinfo, collation, &value, NULL))
|
||||
return false;
|
||||
}
|
||||
char *base = NULL;
|
||||
|
||||
/*
|
||||
* Get a shared lock. This allows vacuum to ensure no in-flight inserts
|
||||
@@ -514,8 +591,8 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
||||
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
||||
|
||||
/* Create an element */
|
||||
element = HnswInitElement(heap_tid, m, HnswGetMl(m), HnswGetMaxLevel(m));
|
||||
element->vec = DatumGetVector(value);
|
||||
element = HnswInitElement(base, heap_tid, m, HnswGetMl(m), HnswGetMaxLevel(m), NULL);
|
||||
HnswPtrStore(base, element->value, DatumGetPointer(value));
|
||||
|
||||
/* Prevent concurrent inserts when likely updating entry point */
|
||||
if (entryPoint == NULL || element->level > entryPoint->level)
|
||||
@@ -531,14 +608,11 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
||||
entryPoint = HnswGetEntryPoint(index);
|
||||
}
|
||||
|
||||
/* Insert element in graph */
|
||||
HnswInsertElement(element, entryPoint, index, procinfo, collation, m, efConstruction, false);
|
||||
/* Find neighbors for element */
|
||||
HnswFindElementNeighbors(base, element, entryPoint, index, procinfo, collation, m, efConstruction, false);
|
||||
|
||||
/* Look for duplicate */
|
||||
dup = HnswFindDuplicate(element);
|
||||
|
||||
/* Write to disk */
|
||||
WriteElement(index, procinfo, collation, element, m, efConstruction, dup, entryPoint);
|
||||
/* Update graph on disk */
|
||||
UpdateGraphOnDisk(index, procinfo, collation, element, m, efConstruction, entryPoint, building);
|
||||
|
||||
/* Release lock */
|
||||
UnlockPage(index, HNSW_UPDATE_LOCK, lockmode);
|
||||
@@ -546,6 +620,30 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
||||
return true;
|
||||
}
|
||||
|
||||
/*
|
||||
* Insert a tuple into the index
|
||||
*/
|
||||
static void
|
||||
HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel)
|
||||
{
|
||||
Datum value;
|
||||
FmgrInfo *normprocinfo;
|
||||
Oid collation = index->rd_indcollation[0];
|
||||
|
||||
/* Detoast once for all calls */
|
||||
value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
|
||||
|
||||
/* Normalize if needed */
|
||||
normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC);
|
||||
if (normprocinfo != NULL)
|
||||
{
|
||||
if (!HnswNormValue(normprocinfo, collation, &value, NULL))
|
||||
return;
|
||||
}
|
||||
|
||||
HnswInsertTupleOnDisk(index, value, values, isnull, heap_tid, heapRel, false);
|
||||
}
|
||||
|
||||
/*
|
||||
* Insert a tuple into the index
|
||||
*/
|
||||
|
||||
@@ -21,6 +21,7 @@ GetScanItems(IndexScanDesc scan, Datum q)
|
||||
List *w;
|
||||
int m;
|
||||
HnswElement entryPoint;
|
||||
char *base = NULL;
|
||||
|
||||
/* Get m and entry point */
|
||||
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
||||
@@ -28,15 +29,15 @@ GetScanItems(IndexScanDesc scan, Datum q)
|
||||
if (entryPoint == NULL)
|
||||
return NIL;
|
||||
|
||||
ep = list_make1(HnswEntryCandidate(entryPoint, q, index, procinfo, collation, false));
|
||||
ep = list_make1(HnswEntryCandidate(base, entryPoint, q, index, procinfo, collation, false));
|
||||
|
||||
for (int lc = entryPoint->level; lc >= 1; lc--)
|
||||
{
|
||||
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, m, false, NULL);
|
||||
w = HnswSearchLayer(base, q, ep, 1, lc, index, procinfo, collation, m, false, NULL);
|
||||
ep = w;
|
||||
}
|
||||
|
||||
return HnswSearchLayer(q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
|
||||
return HnswSearchLayer(base, q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -184,19 +185,19 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
|
||||
|
||||
while (list_length(so->w) > 0)
|
||||
{
|
||||
char *base = NULL;
|
||||
HnswCandidate *hc = llast(so->w);
|
||||
HnswElement element = HnswPtrAccess(base, hc->element);
|
||||
ItemPointer heaptid;
|
||||
|
||||
/* Move to next element if no valid heap TIDs */
|
||||
if (list_length(hc->element->heaptids) == 0)
|
||||
if (element->heaptidsLength == 0)
|
||||
{
|
||||
so->w = list_delete_last(so->w);
|
||||
continue;
|
||||
}
|
||||
|
||||
heaptid = llast(hc->element->heaptids);
|
||||
|
||||
hc->element->heaptids = list_delete_last(hc->element->heaptids);
|
||||
heaptid = &element->heaptids[--element->heaptidsLength];
|
||||
|
||||
MemoryContextSwitchTo(oldCtx);
|
||||
|
||||
|
||||
586
src/hnswutils.c
586
src/hnswutils.c
File diff suppressed because it is too large
Load Diff
@@ -12,12 +12,9 @@
|
||||
* Check if deleted list contains an index TID
|
||||
*/
|
||||
static bool
|
||||
DeletedContains(HTAB *deleted, ItemPointer indextid)
|
||||
DeletedContains(tidhash_hash * deleted, ItemPointer indextid)
|
||||
{
|
||||
bool found;
|
||||
|
||||
hash_search(deleted, indextid, HASH_FIND, &found);
|
||||
return found;
|
||||
return tidhash_lookup(deleted, *indextid) != NULL;
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -62,7 +59,8 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
|
||||
/* Iterate over nodes */
|
||||
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||
{
|
||||
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, offno));
|
||||
ItemId itemid = PageGetItemId(page, offno);
|
||||
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, itemid);
|
||||
int idx = 0;
|
||||
bool itemUpdated = false;
|
||||
|
||||
@@ -93,7 +91,7 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
|
||||
|
||||
if (itemUpdated)
|
||||
{
|
||||
Size etupSize = HNSW_ELEMENT_TUPLE_SIZE(etup->vec.dim);
|
||||
Size etupSize = ItemIdGetLength(itemid);
|
||||
|
||||
/* Mark rest as invalid */
|
||||
for (int i = idx; i < HNSW_HEAPTIDS; i++)
|
||||
@@ -109,11 +107,13 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
|
||||
if (!ItemPointerIsValid(&etup->heaptids[0]))
|
||||
{
|
||||
ItemPointerData ip;
|
||||
bool found;
|
||||
|
||||
/* Add to deleted list */
|
||||
ItemPointerSet(&ip, blkno, offno);
|
||||
|
||||
(void) hash_search(vacuumstate->deleted, &ip, HASH_ENTER, NULL);
|
||||
tidhash_insert(vacuumstate->deleted, ip, &found);
|
||||
Assert(!found);
|
||||
}
|
||||
else if (etup->level > highestLevel && !(entryPoint != NULL && blkno == entryPoint->blkno && offno == entryPoint->offno))
|
||||
{
|
||||
@@ -199,21 +199,22 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
|
||||
BufferAccessStrategy bas = vacuumstate->bas;
|
||||
HnswNeighborTuple ntup = vacuumstate->ntup;
|
||||
Size ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, m);
|
||||
char *base = NULL;
|
||||
|
||||
/* Skip if element is entry point */
|
||||
if (entryPoint != NULL && element->blkno == entryPoint->blkno && element->offno == entryPoint->offno)
|
||||
return;
|
||||
|
||||
/* Init fields */
|
||||
HnswInitNeighbors(element, m);
|
||||
element->heaptids = NIL;
|
||||
HnswInitNeighbors(base, element, m, NULL);
|
||||
element->heaptidsLength = 0;
|
||||
|
||||
/* Add element to graph, skipping itself */
|
||||
HnswInsertElement(element, entryPoint, index, procinfo, collation, m, efConstruction, true);
|
||||
/* Find neighbors for element, skipping itself */
|
||||
HnswFindElementNeighbors(base, element, entryPoint, index, procinfo, collation, m, efConstruction, true);
|
||||
|
||||
/* Update neighbor tuple */
|
||||
/* Do this before getting page to minimize locking */
|
||||
HnswSetNeighborTuple(ntup, element, m);
|
||||
HnswSetNeighborTuple(base, ntup, element, m);
|
||||
|
||||
/* Get neighbor page */
|
||||
buf = ReadBufferExtended(index, MAIN_FORKNUM, element->neighborPage, RBM_NORMAL, bas);
|
||||
@@ -230,7 +231,7 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
|
||||
UnlockReleaseBuffer(buf);
|
||||
|
||||
/* Update neighbors */
|
||||
HnswUpdateNeighborPages(index, procinfo, collation, element, m, true);
|
||||
HnswUpdateNeighborsOnDisk(index, procinfo, collation, element, m, true, false);
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -286,7 +287,7 @@ RepairGraphEntryPoint(HnswVacuumState * vacuumstate)
|
||||
* point is outdated and empty, the entry point will be empty
|
||||
* until an element is repaired.
|
||||
*/
|
||||
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_ALWAYS, highestPoint, InvalidBlockNumber, MAIN_FORKNUM);
|
||||
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_ALWAYS, highestPoint, InvalidBlockNumber, MAIN_FORKNUM, false);
|
||||
}
|
||||
else
|
||||
{
|
||||
@@ -301,7 +302,7 @@ RepairGraphEntryPoint(HnswVacuumState * vacuumstate)
|
||||
{
|
||||
/* Reset neighbors from previous update */
|
||||
if (highestPoint != NULL)
|
||||
highestPoint->neighbors = NULL;
|
||||
HnswPtrStore((char *) NULL, highestPoint->neighbors, (HnswNeighborArrayPtr *) NULL);
|
||||
|
||||
RepairGraphElement(vacuumstate, entryPoint, highestPoint);
|
||||
}
|
||||
@@ -419,7 +420,7 @@ RepairGraph(HnswVacuumState * vacuumstate)
|
||||
* was replaced and highest point was outdated.
|
||||
*/
|
||||
if (entryPoint == NULL || element->level > entryPoint->level)
|
||||
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_GREATER, element, InvalidBlockNumber, MAIN_FORKNUM);
|
||||
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_GREATER, element, InvalidBlockNumber, MAIN_FORKNUM, false);
|
||||
|
||||
/* Release lock */
|
||||
UnlockPage(index, HNSW_UPDATE_LOCK, lockmode);
|
||||
@@ -477,7 +478,8 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
||||
/* Update element and neighbors together */
|
||||
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||
{
|
||||
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, offno));
|
||||
ItemId itemid = PageGetItemId(page, offno);
|
||||
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, itemid);
|
||||
HnswNeighborTuple ntup;
|
||||
Size etupSize;
|
||||
Size ntupSize;
|
||||
@@ -505,7 +507,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
||||
continue;
|
||||
|
||||
/* Calculate sizes */
|
||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(etup->vec.dim);
|
||||
etupSize = ItemIdGetLength(itemid);
|
||||
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(etup->level, vacuumstate->m);
|
||||
|
||||
/* Get neighbor page */
|
||||
@@ -528,7 +530,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
||||
|
||||
/* Overwrite element */
|
||||
etup->deleted = 1;
|
||||
MemSet(&etup->vec.x, 0, etup->vec.dim * sizeof(float));
|
||||
MemSet(&etup->data, 0, VARSIZE_ANY(&etup->data));
|
||||
|
||||
/* Overwrite neighbors */
|
||||
for (int i = 0; i < ntup->count; i++)
|
||||
@@ -563,7 +565,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
||||
}
|
||||
|
||||
/* Update insert page last, after everything has been marked as deleted */
|
||||
HnswUpdateMetaPage(index, 0, NULL, insertPage, MAIN_FORKNUM);
|
||||
HnswUpdateMetaPage(index, 0, NULL, insertPage, MAIN_FORKNUM, false);
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -573,7 +575,6 @@ static void
|
||||
InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkDeleteResult *stats, IndexBulkDeleteCallback callback, void *callback_state)
|
||||
{
|
||||
Relation index = info->index;
|
||||
HASHCTL hash_ctl;
|
||||
|
||||
if (stats == NULL)
|
||||
stats = (IndexBulkDeleteResult *) palloc0(sizeof(IndexBulkDeleteResult));
|
||||
@@ -595,10 +596,7 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
|
||||
HnswGetMetaPageInfo(index, &vacuumstate->m, NULL);
|
||||
|
||||
/* Create hash table */
|
||||
hash_ctl.keysize = sizeof(ItemPointerData);
|
||||
hash_ctl.entrysize = sizeof(ItemPointerData);
|
||||
hash_ctl.hcxt = CurrentMemoryContext;
|
||||
vacuumstate->deleted = hash_create("hnswbulkdelete indextids", 256, &hash_ctl, HASH_ELEM | HASH_BLOBS | HASH_CONTEXT);
|
||||
vacuumstate->deleted = tidhash_create(CurrentMemoryContext, 256, NULL);
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -607,7 +605,7 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
|
||||
static void
|
||||
FreeVacuumState(HnswVacuumState * vacuumstate)
|
||||
{
|
||||
hash_destroy(vacuumstate->deleted);
|
||||
tidhash_destroy(vacuumstate->deleted);
|
||||
FreeAccessStrategy(vacuumstate->bas);
|
||||
pfree(vacuumstate->ntup);
|
||||
MemoryContextDelete(vacuumstate->tmpCtx);
|
||||
|
||||
@@ -543,10 +543,10 @@ CreateListPages(Relation index, VectorArray centers, int dimensions,
|
||||
pfree(list);
|
||||
}
|
||||
|
||||
#ifdef IVFFLAT_KMEANS_DEBUG
|
||||
/*
|
||||
* Print k-means metrics
|
||||
*/
|
||||
#ifdef IVFFLAT_KMEANS_DEBUG
|
||||
static void
|
||||
PrintKmeansMetrics(IvfflatBuildState * buildstate)
|
||||
{
|
||||
|
||||
@@ -6,6 +6,10 @@
|
||||
#include "ivfflat.h"
|
||||
#include "miscadmin.h"
|
||||
|
||||
#ifdef IVFFLAT_MEMORY
|
||||
#include "utils/memutils.h"
|
||||
#endif
|
||||
|
||||
/*
|
||||
* Initialize with kmeans++
|
||||
*
|
||||
@@ -151,6 +155,23 @@ QuickCenters(Relation index, VectorArray samples, VectorArray centers)
|
||||
}
|
||||
}
|
||||
|
||||
#ifdef IVFFLAT_MEMORY
|
||||
/*
|
||||
* Show memory usage
|
||||
*/
|
||||
static void
|
||||
ShowMemoryUsage(Size estimatedSize)
|
||||
{
|
||||
#if PG_VERSION_NUM >= 130000
|
||||
elog(INFO, "total memory: %zu MB",
|
||||
MemoryContextMemAllocated(CurrentMemoryContext, true) / (1024 * 1024));
|
||||
#else
|
||||
MemoryContextStats(CurrentMemoryContext);
|
||||
#endif
|
||||
elog(INFO, "estimated memory: %zu MB", estimatedSize / (1024 * 1024));
|
||||
}
|
||||
#endif
|
||||
|
||||
/*
|
||||
* Use Elkan for performance. This requires distance function to satisfy triangle inequality.
|
||||
*
|
||||
@@ -231,6 +252,10 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
vec->dim = dimensions;
|
||||
}
|
||||
|
||||
#ifdef IVFFLAT_MEMORY
|
||||
ShowMemoryUsage(totalSize);
|
||||
#endif
|
||||
|
||||
/* Pick initial centers */
|
||||
InitCenters(index, samples, centers, lowerBound);
|
||||
|
||||
|
||||
705
src/svector.c
705
src/svector.c
@@ -1,705 +0,0 @@
|
||||
#include "postgres.h"
|
||||
|
||||
#include <math.h>
|
||||
|
||||
#include "fmgr.h"
|
||||
#include "libpq/pqformat.h"
|
||||
#include "svector.h"
|
||||
#include "utils/array.h"
|
||||
#include "vector.h"
|
||||
|
||||
#if PG_VERSION_NUM >= 120000
|
||||
#include "common/shortest_dec.h"
|
||||
#include "utils/float.h"
|
||||
#else
|
||||
#include <float.h>
|
||||
#include "utils/builtins.h"
|
||||
#endif
|
||||
|
||||
/*
|
||||
* Ensure same dimensions
|
||||
*/
|
||||
static inline void
|
||||
CheckDims(SVector * a, SVector * b)
|
||||
{
|
||||
if (a->dim != b->dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("different svector dimensions %d and %d", a->dim, b->dim)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure expected dimensions
|
||||
*/
|
||||
static inline void
|
||||
CheckExpectedDim(int32 typmod, int dim)
|
||||
{
|
||||
if (typmod != -1 && typmod != dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("expected %d dimensions, not %d", typmod, dim)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure valid dimensions
|
||||
*/
|
||||
static inline void
|
||||
CheckDim(int dim)
|
||||
{
|
||||
if (dim < 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("svector must have at least 1 dimension")));
|
||||
|
||||
if (dim > SVECTOR_MAX_DIM)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
|
||||
errmsg("svector cannot have more than %d dimensions", SVECTOR_MAX_DIM)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure valid nnz
|
||||
*/
|
||||
static inline void
|
||||
CheckNnz(int nnz, int dim)
|
||||
{
|
||||
if (nnz < 0)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("svector must have at least one element")));
|
||||
|
||||
if (nnz > dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
|
||||
errmsg("svector cannot have more elements than dimensions")));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure valid index
|
||||
*/
|
||||
static inline void
|
||||
CheckIndex(int32 *indices, int i, int dim)
|
||||
{
|
||||
int32 index = indices[i];
|
||||
|
||||
if (index < 0)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("index must not be negative")));
|
||||
|
||||
if (index >= dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("index must be less than dimensions")));
|
||||
|
||||
if (i > 0)
|
||||
{
|
||||
if (index < indices[i - 1])
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("indexes must be in ascending order")));
|
||||
|
||||
if (index == indices[i - 1])
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("indexes must not contain duplicates")));
|
||||
}
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure finite element
|
||||
*/
|
||||
static inline void
|
||||
CheckElement(float value)
|
||||
{
|
||||
if (isnan(value))
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("NaN not allowed in svector")));
|
||||
|
||||
if (isinf(value))
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("infinite value not allowed in svector")));
|
||||
}
|
||||
|
||||
/*
|
||||
* Allocate and initialize a new sparse vector
|
||||
*/
|
||||
SVector *
|
||||
InitSVector(int dim, int nnz)
|
||||
{
|
||||
SVector *result;
|
||||
int size;
|
||||
|
||||
size = SVECTOR_SIZE(nnz);
|
||||
result = (SVector *) palloc0(size);
|
||||
SET_VARSIZE(result, size);
|
||||
result->dim = dim;
|
||||
result->nnz = nnz;
|
||||
|
||||
return result;
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert textual representation to internal representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_in);
|
||||
Datum
|
||||
svector_in(PG_FUNCTION_ARGS)
|
||||
{
|
||||
char *str = PG_GETARG_CSTRING(0);
|
||||
int32 typmod = PG_GETARG_INT32(2);
|
||||
int dim;
|
||||
char *pt;
|
||||
SVector *result;
|
||||
float *rvalues;
|
||||
char *lit = pstrdup(str);
|
||||
int n;
|
||||
int32 *indices;
|
||||
float *values;
|
||||
int index;
|
||||
float value;
|
||||
int maxNnz;
|
||||
int nnz = 0;
|
||||
|
||||
/* TODO Improve code and checks after deciding on format */
|
||||
|
||||
maxNnz = 1;
|
||||
pt = str;
|
||||
while (*pt != '\0')
|
||||
{
|
||||
if (*pt == ',')
|
||||
maxNnz++;
|
||||
|
||||
pt++;
|
||||
}
|
||||
maxNnz /= 2;
|
||||
|
||||
indices = palloc(maxNnz * sizeof(int32));
|
||||
values = palloc(maxNnz * sizeof(float));
|
||||
|
||||
while (sscanf(str, "(%d,%f)%n", &index, &value, &n) == 2)
|
||||
{
|
||||
/* TODO Better error */
|
||||
if (nnz == maxNnz)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("ran out of buffer: \"%s\"", lit)));
|
||||
|
||||
/* TODO Decide whether to store zero values */
|
||||
indices[nnz] = index;
|
||||
values[nnz] = value;
|
||||
nnz++;
|
||||
|
||||
str += n;
|
||||
|
||||
if (*str == ',')
|
||||
str++;
|
||||
else if (*str == '|')
|
||||
break;
|
||||
else
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("malformed svector literal: \"%s\"", lit)));
|
||||
}
|
||||
|
||||
if (sscanf(str, "|%d|%n", &dim, &n) != 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("malformed svector literal: \"%s\"", lit)));
|
||||
|
||||
str += n;
|
||||
|
||||
if (*str != '\0')
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("malformed svector literal: \"%s\"", lit),
|
||||
errdetail("Junk after closing pipe.")));
|
||||
|
||||
pfree(lit);
|
||||
|
||||
CheckDim(dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
result = InitSVector(dim, nnz);
|
||||
rvalues = SVECTOR_VALUES(result);
|
||||
for (int i = 0; i < nnz; i++)
|
||||
{
|
||||
result->indices[i] = indices[i];
|
||||
rvalues[i] = values[i];
|
||||
|
||||
CheckIndex(result->indices, i, dim);
|
||||
CheckElement(rvalues[i]);
|
||||
}
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert internal representation to textual representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_out);
|
||||
Datum
|
||||
svector_out(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svector = PG_GETARG_SVECTOR_P(0);
|
||||
float *values = SVECTOR_VALUES(svector);
|
||||
char *buf;
|
||||
char *ptr;
|
||||
int n;
|
||||
|
||||
/* TODO Improve code after deciding on format */
|
||||
|
||||
#if PG_VERSION_NUM < 120000
|
||||
int ndig = FLT_DIG + extra_float_digits;
|
||||
|
||||
if (ndig < 1)
|
||||
ndig = 1;
|
||||
|
||||
#define FLOAT_SHORTEST_DECIMAL_LEN (ndig + 10)
|
||||
#endif
|
||||
|
||||
/* TODO Move */
|
||||
#define APPEND_CHAR(ptr, ch) (*(ptr)++ = (ch))
|
||||
|
||||
/* TODO Improve */
|
||||
buf = (char *) palloc((FLOAT_SHORTEST_DECIMAL_LEN + 20) * svector->nnz + 20);
|
||||
ptr = buf;
|
||||
|
||||
for (int i = 0; i < svector->nnz; i++)
|
||||
{
|
||||
if (i > 0)
|
||||
APPEND_CHAR(ptr, ',');
|
||||
|
||||
n = sprintf(ptr, "(%d,", svector->indices[i]);
|
||||
ptr += n;
|
||||
|
||||
#if PG_VERSION_NUM >= 120000
|
||||
n = float_to_shortest_decimal_bufn(values[i], ptr);
|
||||
#else
|
||||
n = sprintf(ptr, "%.*g", ndig, values[i]);
|
||||
#endif
|
||||
ptr += n;
|
||||
|
||||
APPEND_CHAR(ptr, ')');
|
||||
}
|
||||
|
||||
n = sprintf(ptr, "|%d|", svector->dim);
|
||||
ptr += n;
|
||||
|
||||
APPEND_CHAR(ptr, '\0');
|
||||
|
||||
PG_FREE_IF_COPY(svector, 0);
|
||||
PG_RETURN_CSTRING(buf);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert type modifier
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_typmod_in);
|
||||
Datum
|
||||
svector_typmod_in(PG_FUNCTION_ARGS)
|
||||
{
|
||||
ArrayType *ta = PG_GETARG_ARRAYTYPE_P(0);
|
||||
int32 *tl;
|
||||
int n;
|
||||
|
||||
tl = ArrayGetIntegerTypmods(ta, &n);
|
||||
|
||||
if (n != 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
|
||||
errmsg("invalid type modifier")));
|
||||
|
||||
if (*tl < 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
|
||||
errmsg("dimensions for type svector must be at least 1")));
|
||||
|
||||
if (*tl > SVECTOR_MAX_DIM)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
|
||||
errmsg("dimensions for type svector cannot exceed %d", SVECTOR_MAX_DIM)));
|
||||
|
||||
PG_RETURN_INT32(*tl);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert external binary representation to internal representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_recv);
|
||||
Datum
|
||||
svector_recv(PG_FUNCTION_ARGS)
|
||||
{
|
||||
StringInfo buf = (StringInfo) PG_GETARG_POINTER(0);
|
||||
int32 typmod = PG_GETARG_INT32(2);
|
||||
SVector *result;
|
||||
int32 dim;
|
||||
int32 nnz;
|
||||
int32 unused;
|
||||
float *values;
|
||||
|
||||
dim = pq_getmsgint(buf, sizeof(int32));
|
||||
nnz = pq_getmsgint(buf, sizeof(int32));
|
||||
unused = pq_getmsgint(buf, sizeof(int32));
|
||||
|
||||
CheckDim(dim);
|
||||
CheckNnz(nnz, dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
if (unused != 0)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("expected unused to be 0, not %d", unused)));
|
||||
|
||||
result = InitSVector(dim, nnz);
|
||||
values = SVECTOR_VALUES(result);
|
||||
|
||||
for (int i = 0; i < nnz; i++)
|
||||
{
|
||||
result->indices[i] = pq_getmsgint(buf, sizeof(int32));
|
||||
CheckIndex(result->indices, i, dim);
|
||||
}
|
||||
|
||||
for (int i = 0; i < nnz; i++)
|
||||
{
|
||||
values[i] = pq_getmsgfloat4(buf);
|
||||
CheckElement(values[i]);
|
||||
}
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert internal representation to the external binary representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_send);
|
||||
Datum
|
||||
svector_send(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svec = PG_GETARG_SVECTOR_P(0);
|
||||
float *values = SVECTOR_VALUES(svec);
|
||||
StringInfoData buf;
|
||||
|
||||
pq_begintypsend(&buf);
|
||||
pq_sendint(&buf, svec->dim, sizeof(int32));
|
||||
pq_sendint(&buf, svec->nnz, sizeof(int32));
|
||||
pq_sendint(&buf, svec->unused, sizeof(int32));
|
||||
for (int i = 0; i < svec->nnz; i++)
|
||||
pq_sendint(&buf, svec->indices[i], sizeof(int32));
|
||||
for (int i = 0; i < svec->nnz; i++)
|
||||
pq_sendfloat4(&buf, values[i]);
|
||||
|
||||
PG_RETURN_BYTEA_P(pq_endtypsend(&buf));
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert sparse vector to sparse vector
|
||||
* This is needed to check the type modifier
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector);
|
||||
Datum
|
||||
svector(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svec = PG_GETARG_SVECTOR_P(0);
|
||||
int32 typmod = PG_GETARG_INT32(1);
|
||||
|
||||
CheckExpectedDim(typmod, svec->dim);
|
||||
|
||||
PG_RETURN_POINTER(svec);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert dense vector to sparse vector
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_to_svector);
|
||||
Datum
|
||||
vector_to_svector(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *vec = PG_GETARG_VECTOR_P(0);
|
||||
int32 typmod = PG_GETARG_INT32(1);
|
||||
SVector *result;
|
||||
int dim = vec->dim;
|
||||
int nnz = 0;
|
||||
float *values;
|
||||
int j = 0;
|
||||
|
||||
CheckDim(dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
for (int i = 0; i < dim; i++)
|
||||
{
|
||||
if (vec->x[i] != 0)
|
||||
nnz++;
|
||||
}
|
||||
|
||||
result = InitSVector(dim, nnz);
|
||||
values = SVECTOR_VALUES(result);
|
||||
for (int i = 0; i < dim; i++)
|
||||
{
|
||||
if (vec->x[i] != 0)
|
||||
{
|
||||
/* Safety check */
|
||||
if (j == nnz)
|
||||
elog(ERROR, "safety check failed");
|
||||
|
||||
result->indices[j] = i;
|
||||
values[j] = vec->x[i];
|
||||
j++;
|
||||
}
|
||||
}
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the L2 squared distance between sparse vectors
|
||||
*/
|
||||
static double
|
||||
l2_distance_squared_internal(SVector * a, SVector * b)
|
||||
{
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
double distance = 0.0;
|
||||
int bpos = 0;
|
||||
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
{
|
||||
int ai = a->indices[i];
|
||||
int bi = -1;
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
{
|
||||
bi = b->indices[j];
|
||||
|
||||
if (ai == bi)
|
||||
{
|
||||
double diff = ax[i] - bx[j];
|
||||
|
||||
distance += diff * diff;
|
||||
}
|
||||
else if (ai > bi)
|
||||
distance += bx[j] * bx[j];
|
||||
|
||||
/* Update start for next iteration */
|
||||
if (ai >= bi)
|
||||
bpos = j + 1;
|
||||
|
||||
/* Found or passed it */
|
||||
if (bi >= ai)
|
||||
break;
|
||||
}
|
||||
|
||||
if (ai != bi)
|
||||
distance += ax[i] * ax[i];
|
||||
}
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
distance += bx[j] * bx[j];
|
||||
|
||||
return distance;
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the L2 distance between sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_l2_distance);
|
||||
Datum
|
||||
svector_l2_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(sqrt(l2_distance_squared_internal(a, b)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the L2 squared distance between sparse vectors
|
||||
* This saves a sqrt calculation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_l2_squared_distance);
|
||||
Datum
|
||||
svector_l2_squared_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(l2_distance_squared_internal(a, b));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the inner product of two sparse vectors
|
||||
*/
|
||||
static double
|
||||
inner_product_internal(SVector * a, SVector * b)
|
||||
{
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
double distance = 0.0;
|
||||
int bpos = 0;
|
||||
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
{
|
||||
int ai = a->indices[i];
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
{
|
||||
int bi = b->indices[j];
|
||||
|
||||
/* Only update when the same index */
|
||||
if (ai == bi)
|
||||
distance += ax[i] * bx[j];
|
||||
|
||||
/* Update start for next iteration */
|
||||
if (ai >= bi)
|
||||
bpos = j + 1;
|
||||
|
||||
/* Found or passed it */
|
||||
if (bi >= ai)
|
||||
break;
|
||||
}
|
||||
}
|
||||
|
||||
return distance;
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the inner product of two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_inner_product);
|
||||
Datum
|
||||
svector_inner_product(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(inner_product_internal(a, b));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the negative inner product of two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_negative_inner_product);
|
||||
Datum
|
||||
svector_negative_inner_product(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(-inner_product_internal(a, b));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the cosine distance between two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_cosine_distance);
|
||||
Datum
|
||||
svector_cosine_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
float norma = 0.0;
|
||||
float normb = 0.0;
|
||||
double similarity;
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
similarity = inner_product_internal(a, b);
|
||||
|
||||
/* Auto-vectorized */
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
norma += ax[i] * ax[i];
|
||||
|
||||
/* Auto-vectorized */
|
||||
for (int i = 0; i < b->nnz; i++)
|
||||
normb += bx[i] * bx[i];
|
||||
|
||||
/* Use sqrt(a * b) over sqrt(a) * sqrt(b) */
|
||||
similarity /= sqrt((double) norma * (double) normb);
|
||||
|
||||
#ifdef _MSC_VER
|
||||
/* /fp:fast may not propagate NaN */
|
||||
if (isnan(similarity))
|
||||
PG_RETURN_FLOAT8(NAN);
|
||||
#endif
|
||||
|
||||
/* Keep in range */
|
||||
if (similarity > 1)
|
||||
similarity = 1.0;
|
||||
else if (similarity < -1)
|
||||
similarity = -1.0;
|
||||
|
||||
PG_RETURN_FLOAT8(1.0 - similarity);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the weighted Jaccard distance between two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_jaccard_distance);
|
||||
Datum
|
||||
svector_jaccard_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
double num = 0.0;
|
||||
double denom = 0.0;
|
||||
int bpos = 0;
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
/*
|
||||
* Weighted Jaccard distance is not defined for vectors with negative
|
||||
* values. Could check and return NaN if minimal impact on performance.
|
||||
*/
|
||||
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
{
|
||||
int ai = a->indices[i];
|
||||
int bi = -1;
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
{
|
||||
bi = b->indices[j];
|
||||
|
||||
if (ai == bi)
|
||||
{
|
||||
num += ax[i] < bx[j] ? ax[i] : bx[j];
|
||||
denom += ax[i] > bx[j] ? ax[i] : bx[j];
|
||||
}
|
||||
else if (ai > bi)
|
||||
denom += bx[j];
|
||||
|
||||
/* Update start for next iteration */
|
||||
if (ai >= bi)
|
||||
bpos = j + 1;
|
||||
|
||||
/* Found or passed it */
|
||||
if (bi >= ai)
|
||||
break;
|
||||
}
|
||||
|
||||
if (ai != bi)
|
||||
denom += ax[i];
|
||||
}
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
denom += bx[j];
|
||||
|
||||
if (denom > 0)
|
||||
PG_RETURN_FLOAT8(1.0 - (num / denom));
|
||||
else
|
||||
PG_RETURN_FLOAT8(NAN);
|
||||
}
|
||||
@@ -1,23 +0,0 @@
|
||||
#ifndef SVECTOR_H
|
||||
#define SVECTOR_H
|
||||
|
||||
#define SVECTOR_MAX_DIM 100000
|
||||
|
||||
#define SVECTOR_SIZE(_nnz) (offsetof(SVector, indices) + (_nnz) * sizeof(int32) + (_nnz * sizeof(float)))
|
||||
#define SVECTOR_VALUES(x) ((float *) (((char *) (x)) + offsetof(SVector, indices) + (x)->nnz * sizeof(int32)))
|
||||
#define DatumGetSVector(x) ((SVector *) PG_DETOAST_DATUM(x))
|
||||
#define PG_GETARG_SVECTOR_P(x) DatumGetSVector(PG_GETARG_DATUM(x))
|
||||
#define PG_RETURN_SVECTOR_P(x) PG_RETURN_POINTER(x)
|
||||
|
||||
typedef struct SVector
|
||||
{
|
||||
int32 vl_len_; /* varlena header (do not touch directly!) */
|
||||
int32 dim; /* number of dimensions */
|
||||
int32 nnz;
|
||||
int32 unused;
|
||||
int32 indices[FLEXIBLE_ARRAY_MEMBER];
|
||||
} SVector;
|
||||
|
||||
SVector *InitSVector(int dim, int nnz);
|
||||
|
||||
#endif
|
||||
54
src/vector.c
54
src/vector.c
@@ -9,7 +9,6 @@
|
||||
#include "lib/stringinfo.h"
|
||||
#include "libpq/pqformat.h"
|
||||
#include "port.h" /* for strtof() */
|
||||
#include "svector.h"
|
||||
#include "utils/array.h"
|
||||
#include "utils/builtins.h"
|
||||
#include "utils/lsyscache.h"
|
||||
@@ -725,7 +724,7 @@ vector_spherical_distance(PG_FUNCTION_ARGS)
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the L1 distance between vectors
|
||||
* Get the L1 distance between two vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(l1_distance);
|
||||
Datum
|
||||
@@ -904,8 +903,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_lt);
|
||||
Datum
|
||||
vector_lt(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) < 0);
|
||||
}
|
||||
@@ -917,8 +916,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_le);
|
||||
Datum
|
||||
vector_le(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) <= 0);
|
||||
}
|
||||
@@ -930,8 +929,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_eq);
|
||||
Datum
|
||||
vector_eq(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) == 0);
|
||||
}
|
||||
@@ -943,8 +942,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_ne);
|
||||
Datum
|
||||
vector_ne(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) != 0);
|
||||
}
|
||||
@@ -956,8 +955,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_ge);
|
||||
Datum
|
||||
vector_ge(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) >= 0);
|
||||
}
|
||||
@@ -969,8 +968,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_gt);
|
||||
Datum
|
||||
vector_gt(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) > 0);
|
||||
}
|
||||
@@ -982,8 +981,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_cmp);
|
||||
Datum
|
||||
vector_cmp(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
PG_RETURN_INT32(vector_cmp_internal(a, b));
|
||||
}
|
||||
@@ -1152,26 +1151,3 @@ vector_avg(PG_FUNCTION_ARGS)
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert sparse vector to dense vector
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_to_vector);
|
||||
Datum
|
||||
svector_to_vector(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svec = PG_GETARG_SVECTOR_P(0);
|
||||
int32 typmod = PG_GETARG_INT32(1);
|
||||
Vector *result;
|
||||
int dim = svec->dim;
|
||||
float *values = SVECTOR_VALUES(svec);
|
||||
|
||||
CheckDim(dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
result = InitVector(dim);
|
||||
for (int i = 0; i < svec->nnz; i++)
|
||||
result->x[svec->indices[i]] = values[i];
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
@@ -54,85 +54,85 @@ SELECT vector_norm('[3e37,4e37]')::real;
|
||||
5e+37
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('[0,0]'::vector, '[3,4]');
|
||||
SELECT l2_distance('[0,0]', '[3,4]');
|
||||
l2_distance
|
||||
-------------
|
||||
5
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('[0,0]'::vector, '[0,1]');
|
||||
SELECT l2_distance('[0,0]', '[0,1]');
|
||||
l2_distance
|
||||
-------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('[1,2]'::vector, '[3]');
|
||||
SELECT l2_distance('[1,2]', '[3]');
|
||||
ERROR: different vector dimensions 2 and 1
|
||||
SELECT l2_distance('[3e38]'::vector, '[-3e38]');
|
||||
SELECT l2_distance('[3e38]', '[-3e38]');
|
||||
l2_distance
|
||||
-------------
|
||||
Infinity
|
||||
(1 row)
|
||||
|
||||
SELECT inner_product('[1,2]'::vector, '[3,4]');
|
||||
SELECT inner_product('[1,2]', '[3,4]');
|
||||
inner_product
|
||||
---------------
|
||||
11
|
||||
(1 row)
|
||||
|
||||
SELECT inner_product('[1,2]'::vector, '[3]');
|
||||
SELECT inner_product('[1,2]', '[3]');
|
||||
ERROR: different vector dimensions 2 and 1
|
||||
SELECT inner_product('[3e38]'::vector, '[3e38]');
|
||||
SELECT inner_product('[3e38]', '[3e38]');
|
||||
inner_product
|
||||
---------------
|
||||
Infinity
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,2]'::vector, '[2,4]');
|
||||
SELECT cosine_distance('[1,2]', '[2,4]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,2]'::vector, '[0,0]');
|
||||
SELECT cosine_distance('[1,2]', '[0,0]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1,1]');
|
||||
SELECT cosine_distance('[1,1]', '[1,1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,0]'::vector, '[0,2]');
|
||||
SELECT cosine_distance('[1,0]', '[0,2]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1,-1]');
|
||||
SELECT cosine_distance('[1,1]', '[-1,-1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
2
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,2]'::vector, '[3]');
|
||||
SELECT cosine_distance('[1,2]', '[3]');
|
||||
ERROR: different vector dimensions 2 and 1
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]');
|
||||
SELECT cosine_distance('[1,1]', '[1.1,1.1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]');
|
||||
SELECT cosine_distance('[1,1]', '[-1.1,-1.1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
2
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[3e38]'::vector, '[3e38]');
|
||||
SELECT cosine_distance('[3e38]', '[3e38]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
|
||||
@@ -1,140 +0,0 @@
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector;
|
||||
svector
|
||||
--------------------
|
||||
(0,1.5),(2,3.5)|5|
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector;
|
||||
vector
|
||||
-----------------
|
||||
[1.5,0,3.5,0,0]
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(5);
|
||||
vector
|
||||
-----------------
|
||||
[1.5,0,3.5,0,0]
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(4);
|
||||
ERROR: expected 4 dimensions, not 5
|
||||
SELECT '[0,1.5,0,3.5,0]'::vector::svector;
|
||||
svector
|
||||
--------------------
|
||||
(1,1.5),(3,3.5)|5|
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,0),(1,1),(2,0)|3|'::svector;
|
||||
svector
|
||||
----------------------
|
||||
(0,0),(1,1),(2,0)|3|
|
||||
(1 row)
|
||||
|
||||
SELECT '|5|'::svector;
|
||||
svector
|
||||
---------
|
||||
|5|
|
||||
(1 row)
|
||||
|
||||
SELECT '|-1|'::svector;
|
||||
ERROR: svector must have at least 1 dimension
|
||||
LINE 1: SELECT '|-1|'::svector;
|
||||
^
|
||||
SELECT '|100001|'::svector;
|
||||
ERROR: svector cannot have more than 100000 dimensions
|
||||
LINE 1: SELECT '|100001|'::svector;
|
||||
^
|
||||
SELECT '|16001|'::svector::vector;
|
||||
ERROR: vector cannot have more than 16000 dimensions
|
||||
SELECT '(-1,1)|1|'::svector;
|
||||
ERROR: index must not be negative
|
||||
LINE 1: SELECT '(-1,1)|1|'::svector;
|
||||
^
|
||||
SELECT '(1,1)|1|'::svector;
|
||||
ERROR: index must be less than dimensions
|
||||
LINE 1: SELECT '(1,1)|1|'::svector;
|
||||
^
|
||||
SELECT '|1|'::svector(2);
|
||||
ERROR: expected 2 dimensions, not 1
|
||||
SELECT l2_distance('|2|'::svector, '(0,3),(1,4)|2|');
|
||||
l2_distance
|
||||
-------------
|
||||
5
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('|2|'::svector, '(1,1)|2|');
|
||||
l2_distance
|
||||
-------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT '|2|'::svector <-> '(0,3),(1,4)|2|';
|
||||
?column?
|
||||
----------
|
||||
5
|
||||
(1 row)
|
||||
|
||||
SELECT inner_product('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
inner_product
|
||||
---------------
|
||||
10
|
||||
(1 row)
|
||||
|
||||
SELECT svector_negative_inner_product('(0,1),(1,2)|2|', '(0,2),(1,4)|2|');
|
||||
svector_negative_inner_product
|
||||
--------------------------------
|
||||
-10
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,1)|2|'::svector, '(0,-1),(1,-1)|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
2
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(1,2)|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('|1|'::svector, '|1|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(0,1)|3|');
|
||||
ERROR: different svector dimensions 2 and 3
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|2|');
|
||||
jaccard_distance
|
||||
------------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT jaccard_distance('(0,1)|2|', '(1,1)|2|');
|
||||
jaccard_distance
|
||||
------------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT jaccard_distance('|1|', '|1|');
|
||||
jaccard_distance
|
||||
------------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|3|');
|
||||
ERROR: different svector dimensions 2 and 3
|
||||
@@ -13,24 +13,24 @@ SELECT vector_norm('[3,4]');
|
||||
SELECT vector_norm('[0,1]');
|
||||
SELECT vector_norm('[3e37,4e37]')::real;
|
||||
|
||||
SELECT l2_distance('[0,0]'::vector, '[3,4]');
|
||||
SELECT l2_distance('[0,0]'::vector, '[0,1]');
|
||||
SELECT l2_distance('[1,2]'::vector, '[3]');
|
||||
SELECT l2_distance('[3e38]'::vector, '[-3e38]');
|
||||
SELECT l2_distance('[0,0]', '[3,4]');
|
||||
SELECT l2_distance('[0,0]', '[0,1]');
|
||||
SELECT l2_distance('[1,2]', '[3]');
|
||||
SELECT l2_distance('[3e38]', '[-3e38]');
|
||||
|
||||
SELECT inner_product('[1,2]'::vector, '[3,4]');
|
||||
SELECT inner_product('[1,2]'::vector, '[3]');
|
||||
SELECT inner_product('[3e38]'::vector, '[3e38]');
|
||||
SELECT inner_product('[1,2]', '[3,4]');
|
||||
SELECT inner_product('[1,2]', '[3]');
|
||||
SELECT inner_product('[3e38]', '[3e38]');
|
||||
|
||||
SELECT cosine_distance('[1,2]'::vector, '[2,4]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[0,0]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1,1]');
|
||||
SELECT cosine_distance('[1,0]'::vector, '[0,2]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1,-1]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[3]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]');
|
||||
SELECT cosine_distance('[3e38]'::vector, '[3e38]');
|
||||
SELECT cosine_distance('[1,2]', '[2,4]');
|
||||
SELECT cosine_distance('[1,2]', '[0,0]');
|
||||
SELECT cosine_distance('[1,1]', '[1,1]');
|
||||
SELECT cosine_distance('[1,0]', '[0,2]');
|
||||
SELECT cosine_distance('[1,1]', '[-1,-1]');
|
||||
SELECT cosine_distance('[1,2]', '[3]');
|
||||
SELECT cosine_distance('[1,1]', '[1.1,1.1]');
|
||||
SELECT cosine_distance('[1,1]', '[-1.1,-1.1]');
|
||||
SELECT cosine_distance('[3e38]', '[3e38]');
|
||||
|
||||
SELECT l1_distance('[0,0]', '[3,4]');
|
||||
SELECT l1_distance('[0,0]', '[0,1]');
|
||||
|
||||
@@ -1,36 +0,0 @@
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector;
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector;
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(5);
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(4);
|
||||
SELECT '[0,1.5,0,3.5,0]'::vector::svector;
|
||||
|
||||
SELECT '(0,0),(1,1),(2,0)|3|'::svector;
|
||||
|
||||
SELECT '|5|'::svector;
|
||||
SELECT '|-1|'::svector;
|
||||
SELECT '|100001|'::svector;
|
||||
SELECT '|16001|'::svector::vector;
|
||||
|
||||
SELECT '(-1,1)|1|'::svector;
|
||||
SELECT '(1,1)|1|'::svector;
|
||||
|
||||
SELECT '|1|'::svector(2);
|
||||
|
||||
SELECT l2_distance('|2|'::svector, '(0,3),(1,4)|2|');
|
||||
SELECT l2_distance('|2|'::svector, '(1,1)|2|');
|
||||
SELECT '|2|'::svector <-> '(0,3),(1,4)|2|';
|
||||
|
||||
SELECT inner_product('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
SELECT svector_negative_inner_product('(0,1),(1,2)|2|', '(0,2),(1,4)|2|');
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '|2|');
|
||||
SELECT cosine_distance('(0,1),(1,1)|2|'::svector, '(0,-1),(1,-1)|2|');
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(1,2)|2|');
|
||||
SELECT cosine_distance('|1|'::svector, '|1|');
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(0,1)|3|');
|
||||
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|2|');
|
||||
SELECT jaccard_distance('(0,1)|2|', '(1,1)|2|');
|
||||
SELECT jaccard_distance('|1|', '|1|');
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|3|');
|
||||
@@ -83,11 +83,46 @@ for my $i (0 .. $#operators)
|
||||
push(@expected, $res);
|
||||
}
|
||||
|
||||
# Add index
|
||||
$node->safe_psql("postgres", "CREATE INDEX ON tst USING hnsw (v $opclass);");
|
||||
# Build index serially
|
||||
$node->safe_psql("postgres", qq(
|
||||
SET max_parallel_maintenance_workers = 0;
|
||||
CREATE INDEX idx ON tst USING hnsw (v $opclass);
|
||||
));
|
||||
|
||||
# Test approximate results
|
||||
my $min = $operator eq "<#>" ? 0.80 : 0.99;
|
||||
test_recall($min, $operator);
|
||||
|
||||
$node->safe_psql("postgres", "DROP INDEX idx;");
|
||||
|
||||
# Build index in parallel in memory
|
||||
my ($ret, $stdout, $stderr) = $node->psql("postgres", qq(
|
||||
SET client_min_messages = DEBUG;
|
||||
SET min_parallel_table_scan_size = 1;
|
||||
CREATE INDEX idx ON tst USING hnsw (v $opclass);
|
||||
));
|
||||
is($ret, 0, $stderr);
|
||||
like($stderr, qr/using \d+ parallel workers/);
|
||||
|
||||
# Test approximate results
|
||||
test_recall($min, $operator);
|
||||
|
||||
$node->safe_psql("postgres", "DROP INDEX idx;");
|
||||
|
||||
# Build index in parallel on disk
|
||||
# Set parallel_workers on table to use workers with low maintenance_work_mem
|
||||
($ret, $stdout, $stderr) = $node->psql("postgres", qq(
|
||||
ALTER TABLE tst SET (parallel_workers = 2);
|
||||
SET client_min_messages = DEBUG;
|
||||
SET maintenance_work_mem = '4MB';
|
||||
CREATE INDEX idx ON tst USING hnsw (v $opclass);
|
||||
ALTER TABLE tst RESET (parallel_workers);
|
||||
));
|
||||
is($ret, 0, $stderr);
|
||||
like($stderr, qr/using \d+ parallel workers/);
|
||||
like($stderr, qr/hnsw graph no longer fits into maintenance_work_mem/);
|
||||
|
||||
$node->safe_psql("postgres", "DROP INDEX idx;");
|
||||
}
|
||||
|
||||
done_testing();
|
||||
|
||||
Reference in New Issue
Block a user