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20 Commits

Author SHA1 Message Date
Andrew Kane
dbc56491f4 Added filtering for text columns 2024-02-13 13:14:13 -08:00
Andrew Kane
f712847781 Added duplicate checking for index tuples [skip ci] 2024-02-07 13:56:41 -08:00
Andrew Kane
e3c33c9ba2 Set eMatches 2024-02-05 21:50:59 -08:00
Andrew Kane
48ba549a0a Fixed Postgres 12 2024-02-05 21:43:49 -08:00
Andrew Kane
a8fdffc9a2 Added support for inline filtering with HNSW 2024-02-05 21:40:20 -08:00
Andrew Kane
51df640961 Added instructions for pkg [skip ci] 2024-02-05 17:01:36 -08:00
Andrew Kane
2716a223a6 Fixed error with ANALYZE and vectors with different dimensions - fixes #451 2024-02-02 10:47:48 -08:00
Andrew Kane
3697043898 Added note about vacuuming - closes #450 [skip ci] 2024-01-31 14:35:27 -08:00
Andrew Kane
c22740962c Added note for Docker [skip ci] 2024-01-29 15:33:29 -08:00
Andrew Kane
a55ecf3281 Updated changelog [skip ci] 2024-01-29 11:20:33 -08:00
Andrew Kane
fecdd5794e Updated readme [skip ci] 2024-01-29 10:57:54 -08:00
Andrew Kane
281d4fcf60 Version bump to 0.6.0 [skip ci] 2024-01-29 10:54:44 -08:00
Andrew Kane
5b43aaad5a Removed unneeded item ids 2024-01-28 23:14:52 -08:00
Andrew Kane
797ce8034c Ran pgindent [skip ci] 2024-01-28 23:03:48 -08:00
Andrew Kane
cad9e22d9a Updated variable name to be consistent with CreateGraphPages [skip ci] 2024-01-28 23:02:13 -08:00
Andrew Kane
a7d43904f7 Zero memory for each element 2024-01-28 23:00:39 -08:00
Andrew Kane
ded649891b DRY HNSW tuple alloc size [skip ci] 2024-01-28 22:58:38 -08:00
Heikki Linnakangas
2d092016fc Remove unnecessary PageIndexTupleOverwrite calls that caused UB (#438)
These places called PageIndexTupleOverwrite(), with the new tuple
pointing directly to the original page. The PageIndexTupleOverwrite()
call is unnecessary in these cases, as we have already modified the
tuple on the page directly. Moreover, PageIndexTupleOverWrite() will
call memcpy with same src and dst arguments, which is undefined
behavior.

It's OK to modify the pages on disk directly, and we don't need
critical sections, because we either use the generic xlog functions
which create a temporary copy of the page, or we are building a new
index so if we crash the whole index is invisible and will be dropped
anyway.
2024-01-28 22:52:56 -08:00
Andrew Kane
86b31fdf96 Revert "Update neighbor tuples in-place for HNSW index build"
This reverts commit 270dd8189a.
2024-01-28 22:18:22 -08:00
Andrew Kane
5023269f0d Updated changelog [skip ci] 2024-01-28 21:42:30 -08:00
20 changed files with 591 additions and 140 deletions

View File

@@ -1,11 +1,19 @@
## 0.6.0 (unreleased)
## 0.7.0 (unreleased)
If upgrading with Postgres 12 or Docker, see [these notes](https://github.com/pgvector/pgvector#060-unreleased).
- Added support for inline filtering with HNSW
## 0.6.1 (unreleased)
- Fixed error with `ANALYZE` and vectors with different dimensions
## 0.6.0 (2024-01-29)
If upgrading with Postgres 12 or Docker, see [these notes](https://github.com/pgvector/pgvector#060).
- Changed storage for vector from `extended` to `external`
- Improved performance of HNSW
- Added support for parallel index builds for HNSW
- Added validation for GUC parameters
- Changed storage for vector from `extended` to `external`
- Improved performance of HNSW
- Reduced memory usage for HNSW index builds
- Reduced WAL generation for HNSW index builds
- Fixed error with logical replication

View File

@@ -1,4 +1,4 @@
ARG PG_MAJOR=15
ARG PG_MAJOR=16
FROM postgres:$PG_MAJOR
ARG PG_MAJOR

View File

@@ -2,7 +2,7 @@
"name": "vector",
"abstract": "Open-source vector similarity search for Postgres",
"description": "Supports L2 distance, inner product, and cosine distance",
"version": "0.5.1",
"version": "0.6.0",
"maintainer": [
"Andrew Kane <andrew@ankane.org>"
],
@@ -20,7 +20,7 @@
"vector": {
"file": "sql/vector.sql",
"docfile": "README.md",
"version": "0.5.1",
"version": "0.6.0",
"abstract": "Open-source vector similarity search for Postgres"
}
},

View File

@@ -1,5 +1,5 @@
EXTENSION = vector
EXTVERSION = 0.5.1
EXTVERSION = 0.6.0
MODULE_big = vector
DATA = $(wildcard sql/*--*.sql)

View File

@@ -1,5 +1,5 @@
EXTENSION = vector
EXTVERSION = 0.5.1
EXTVERSION = 0.6.0
OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\vector.obj
HEADERS = src\vector.h

View File

@@ -16,11 +16,11 @@ Plus [ACID](https://en.wikipedia.org/wiki/ACID) compliance, point-in-time recove
### Linux and Mac
Compile and install the extension (supports Postgres 11+)
Compile and install the extension (supports Postgres 12+)
```sh
cd /tmp
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
git clone --branch v0.6.0 https://github.com/pgvector/pgvector.git
cd pgvector
make
make install # may need sudo
@@ -28,7 +28,7 @@ make install # may need sudo
See the [installation notes](#installation-notes) if you run into issues
You can also install it with [Docker](#docker), [Homebrew](#homebrew), [PGXN](#pgxn), [APT](#apt), [Yum](#yum), or [conda-forge](#conda-forge), and it comes preinstalled with [Postgres.app](#postgresapp) and many [hosted providers](#hosted-postgres). There are also instructions for [GitHub Actions](https://github.com/pgvector/setup-pgvector).
You can also install it with [Docker](#docker), [Homebrew](#homebrew), [PGXN](#pgxn), [APT](#apt), [Yum](#yum), [pkg](#pkg), or [conda-forge](#conda-forge), and it comes preinstalled with [Postgres.app](#postgresapp) and many [hosted providers](#hosted-postgres). There are also instructions for [GitHub Actions](https://github.com/pgvector/setup-pgvector).
### Windows
@@ -44,7 +44,7 @@ Then use `nmake` to build:
```cmd
set "PGROOT=C:\Program Files\PostgreSQL\16"
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
git clone --branch v0.6.0 https://github.com/pgvector/pgvector.git
cd pgvector
nmake /F Makefile.win
nmake /F Makefile.win install
@@ -264,7 +264,7 @@ HINT: Increase maintenance_work_mem to speed up builds.
Note: Do not set `maintenance_work_mem` so high that it exhausts the memory on the server
Starting with 0.6.0 [unreleased], you can also speed up index creation by increasing the number of parallel workers (2 by default)
Starting with 0.6.0, you can also speed up index creation by increasing the number of parallel workers (2 by default)
```sql
SET max_parallel_maintenance_workers = 7; -- plus leader
@@ -377,6 +377,12 @@ Create an index on one [or more](https://www.postgresql.org/docs/current/indexes
CREATE INDEX ON items (category_id);
```
Or a composite HNSW index for approximate search (added in 0.7.0)
```sql
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops, category_id);
```
Or a [partial index](https://www.postgresql.org/docs/current/indexes-partial.html) on the vector column for approximate search
```sql
@@ -430,6 +436,15 @@ To speed up queries with an IVFFlat index, increase the number of inverted lists
CREATE INDEX ON items USING ivfflat (embedding vector_l2_ops) WITH (lists = 1000);
```
## Vacuuming
Vacuuming can take a while for HNSW indexes. Speed it up by reindexing first.
```sql
REINDEX INDEX CONCURRENTLY index_name;
VACUUM table_name;
```
## Languages
Use pgvector from any language with a Postgres client. You can even generate and store vectors in one language and query them in another.
@@ -651,20 +666,20 @@ If compilation fails and the output includes `warning: no such sysroot directory
### Docker
Get the [Docker image](https://hub.docker.com/r/ankane/pgvector) with:
Get the [Docker image](https://hub.docker.com/r/pgvector/pgvector) with:
```sh
docker pull ankane/pgvector
docker pull pgvector/pgvector:pg16
```
This adds pgvector to the [Postgres image](https://hub.docker.com/_/postgres) (run it the same way).
This adds pgvector to the [Postgres image](https://hub.docker.com/_/postgres) (replace `16` with your Postgres server version, and run it the same way).
You can also build the image manually:
```sh
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
git clone --branch v0.6.0 https://github.com/pgvector/pgvector.git
cd pgvector
docker build --build-arg PG_MAJOR=15 -t myuser/pgvector .
docker build --build-arg PG_MAJOR=16 -t myuser/pgvector .
```
### Homebrew
@@ -707,6 +722,21 @@ sudo dnf install pgvector_16
Note: Replace `16` with your Postgres server version
### pkg
Install the FreeBSD package with:
```sh
pkg install postgresql15-pg_vector
```
or the port with:
```sh
cd /usr/ports/databases/pg_vector
make install
```
### conda-forge
With Conda Postgres, install from [conda-forge](https://anaconda.org/conda-forge/pgvector) with:
@@ -741,7 +771,7 @@ SELECT extversion FROM pg_extension WHERE extname = 'vector';
## Upgrade Notes
### 0.6.0 [unreleased]
### 0.6.0
#### Postgres 12

View File

@@ -0,0 +1,10 @@
-- complain if script is sourced in psql, rather than via CREATE EXTENSION
\echo Use "ALTER EXTENSION vector UPDATE TO '0.7.0'" to load this file. \quit
CREATE OPERATOR CLASS vector_integer_ops
DEFAULT FOR TYPE integer USING hnsw AS
OPERATOR 2 = (integer, integer);
CREATE OPERATOR CLASS vector_text_ops
DEFAULT FOR TYPE text USING hnsw AS
OPERATOR 2 = (text, text);

View File

@@ -290,3 +290,13 @@ CREATE OPERATOR CLASS vector_cosine_ops
OPERATOR 1 <=> (vector, vector) FOR ORDER BY float_ops,
FUNCTION 1 vector_negative_inner_product(vector, vector),
FUNCTION 2 vector_norm(vector);
-- hnsw attributes
CREATE OPERATOR CLASS vector_integer_ops
DEFAULT FOR TYPE integer USING hnsw AS
OPERATOR 2 = (integer, integer);
CREATE OPERATOR CLASS vector_text_ops
DEFAULT FOR TYPE text USING hnsw AS
OPERATOR 2 = (text, text);

View File

@@ -200,7 +200,7 @@ hnswhandler(PG_FUNCTION_ARGS)
amroutine->amcanorderbyop = true;
amroutine->amcanbackward = false; /* can change direction mid-scan */
amroutine->amcanunique = false;
amroutine->amcanmulticol = false;
amroutine->amcanmulticol = true;
amroutine->amoptionalkey = true;
amroutine->amsearcharray = false;
amroutine->amsearchnulls = false;

View File

@@ -60,6 +60,7 @@
#define PROGRESS_HNSW_PHASE_LOAD 2
#define HNSW_MAX_SIZE (BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - sizeof(ItemIdData))
#define HNSW_TUPLE_ALLOC_SIZE BLCKSZ
#define HNSW_ELEMENT_TUPLE_SIZE(size) MAXALIGN(offsetof(HnswElementTupleData, data) + (size))
#define HNSW_NEIGHBOR_TUPLE_SIZE(level, m) MAXALIGN(offsetof(HnswNeighborTupleData, indextids) + ((level) + 2) * (m) * sizeof(ItemPointerData))
@@ -127,6 +128,7 @@ HnswPtrDeclare(HnswElementData, HnswElementRelptr, HnswElementPtr);
HnswPtrDeclare(HnswNeighborArray, HnswNeighborArrayRelptr, HnswNeighborArrayPtr);
HnswPtrDeclare(HnswNeighborArrayPtr, HnswNeighborsRelptr, HnswNeighborsPtr);
HnswPtrDeclare(char, DatumRelptr, DatumPtr);
HnswPtrDeclare(IndexTupleData, IndexTupleRelptr, IndexTuplePtr);
typedef struct HnswElementData
{
@@ -142,6 +144,7 @@ typedef struct HnswElementData
OffsetNumber neighborOffno;
BlockNumber neighborPage;
DatumPtr value;
IndexTuplePtr itup;
LWLock lock;
} HnswElementData;
@@ -354,6 +357,7 @@ typedef struct HnswVacuumState
/* Variables */
struct tidhash_hash *deleted;
BufferAccessStrategy bas;
HnswNeighborTuple ntup;
HnswElementData highestPoint;
/* Memory */
@@ -368,7 +372,7 @@ bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * re
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
void HnswInitPage(Buffer buf, Page page);
void HnswInit(void);
List *HnswSearchLayer(char *base, Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
List *HnswSearchLayer(char *base, Datum q, IndexScanDesc scan, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
HnswElement HnswGetEntryPoint(Relation index);
void HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint);
void *HnswAlloc(HnswAllocator * allocator, Size size);
@@ -382,11 +386,14 @@ void HnswAddHeapTid(HnswElement element, ItemPointer heaptid);
void HnswInitNeighbors(char *base, HnswElement element, int m, HnswAllocator * alloc);
bool HnswInsertTupleOnDisk(Relation index, Datum value, Datum *values, bool *isnull, ItemPointer heap_tid, bool building);
void HnswUpdateNeighborsOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting, bool building);
void HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec);
void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec);
void HnswSetElementTuple(char *base, HnswElementTuple etup, HnswElement element);
void HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec, Relation index);
void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec, IndexScanDesc scan, bool *matches);
void HnswSetElementTuple(char *base, HnswElementTuple etup, HnswElement element, bool useIndexTuple);
void HnswUpdateConnection(char *base, HnswElement element, HnswCandidate * hc, int lm, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
void HnswLoadNeighbors(HnswElement element, Relation index, int m);
TupleDesc HnswTupleDesc(Relation index);
IndexTuple HnswFormIndexTuple(Relation index, TupleDesc tupdesc, Datum value, Datum *values, bool *isnull);
bool HnswElementIsDuplicate(char *base, HnswElement a, HnswElement b, Relation index);
PGDLLEXPORT void HnswParallelBuildMain(dsm_segment *seg, shm_toc *toc);
/* Index access methods */

View File

@@ -148,7 +148,6 @@ CreateGraphPages(HnswBuildState * buildstate)
{
Relation index = buildstate->index;
ForkNumber forkNum = buildstate->forkNum;
Size etupAllocSize;
Size maxSize;
HnswElementTuple etup;
HnswNeighborTuple ntup;
@@ -158,14 +157,14 @@ CreateGraphPages(HnswBuildState * buildstate)
Page page;
HnswElementPtr iter = buildstate->graph->head;
char *base = buildstate->hnswarea;
bool useIndexTuple = IndexRelationGetNumberOfAttributes(index) > 1;
/* Calculate sizes */
etupAllocSize = BLCKSZ;
maxSize = HNSW_MAX_SIZE;
/* Allocate once */
etup = palloc0(etupAllocSize);
ntup = palloc0(BLCKSZ);
etup = palloc0(HNSW_TUPLE_ALLOC_SIZE);
ntup = palloc0(HNSW_TUPLE_ALLOC_SIZE);
/* Prepare first page */
buf = HnswNewBuffer(index, forkNum);
@@ -178,24 +177,25 @@ CreateGraphPages(HnswBuildState * buildstate)
Size etupSize;
Size ntupSize;
Size combinedSize;
void *valuePtr = HnswPtrAccess(base, element->value);
Pointer valuePtr = HnswPtrAccess(base, element->value);
IndexTuple itup = HnswPtrAccess(base, element->itup);
/* Update iterator */
iter = element->next;
/* Zero memory for each element */
MemSet(etup, 0, etupAllocSize);
MemSet(etup, 0, HNSW_TUPLE_ALLOC_SIZE);
/* Calculate sizes */
etupSize = HNSW_ELEMENT_TUPLE_SIZE(VARSIZE_ANY(valuePtr));
etupSize = HNSW_ELEMENT_TUPLE_SIZE(useIndexTuple ? IndexTupleSize(itup) : VARSIZE_ANY(valuePtr));
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, buildstate->m);
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
/* Initial size check */
if (etupSize > etupAllocSize)
if (etupSize > HNSW_TUPLE_ALLOC_SIZE)
elog(ERROR, "index tuple too large");
HnswSetElementTuple(base, etup, element);
HnswSetElementTuple(base, etup, element, useIndexTuple);
/* Keep element and neighbors on the same page if possible */
if (PageGetFreeSpace(page) < etupSize || (combinedSize <= maxSize && PageGetFreeSpace(page) < combinedSize))
@@ -254,38 +254,43 @@ WriteNeighborTuples(HnswBuildState * buildstate)
int m = buildstate->m;
HnswElementPtr iter = buildstate->graph->head;
char *base = buildstate->hnswarea;
HnswNeighborTuple ntup;
/* Allocate once */
ntup = palloc0(HNSW_TUPLE_ALLOC_SIZE);
while (!HnswPtrIsNull(base, iter))
{
HnswElement e = HnswPtrAccess(base, iter);
HnswElement element = HnswPtrAccess(base, iter);
Buffer buf;
Page page;
ItemId itemid;
HnswNeighborTuple ntup;
Size ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, m);
/* Update iterator */
iter = e->next;
iter = element->next;
/* Zero memory for each element */
MemSet(ntup, 0, HNSW_TUPLE_ALLOC_SIZE);
/* Can take a while, so ensure we can interrupt */
/* Needs to be called when no buffer locks are held */
CHECK_FOR_INTERRUPTS();
buf = ReadBufferExtended(index, forkNum, e->neighborPage, RBM_NORMAL, NULL);
buf = ReadBufferExtended(index, forkNum, element->neighborPage, RBM_NORMAL, NULL);
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
page = BufferGetPage(buf);
itemid = PageGetItemId(page, e->neighborOffno);
ntup = (HnswNeighborTuple) PageGetItem(page, itemid);
/* Check expected size */
Assert(ItemIdGetLength(itemid) == HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m));
HnswSetNeighborTuple(base, ntup, element, m);
/* Update page in-place */
HnswSetNeighborTuple(base, ntup, e, m);
if (!PageIndexTupleOverwrite(page, element->neighborOffno, (Item) ntup, ntupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */
MarkBufferDirty(buf);
UnlockReleaseBuffer(buf);
}
pfree(ntup);
}
/*
@@ -331,19 +336,17 @@ AddDuplicateInMemory(HnswElement element, HnswElement dup)
* Find duplicate element
*/
static bool
FindDuplicateInMemory(char *base, HnswElement element)
FindDuplicateInMemory(char *base, HnswElement element, Relation index)
{
HnswNeighborArray *neighbors = HnswGetNeighbors(base, element, 0);
Datum value = HnswGetValue(base, element);
for (int i = 0; i < neighbors->length; i++)
{
HnswCandidate *neighbor = &neighbors->items[i];
HnswElement neighborElement = HnswPtrAccess(base, neighbor->element);
Datum neighborValue = HnswGetValue(base, neighborElement);
/* Exit early since ordered by distance */
if (!datumIsEqual(value, neighborValue, false, -1))
if (!HnswElementIsDuplicate(base, element, neighborElement, index))
return false;
/* Check for space */
@@ -403,7 +406,7 @@ UpdateGraphInMemory(FmgrInfo *procinfo, Oid collation, HnswElement element, int
char *base = buildstate->hnswarea;
/* Look for duplicate */
if (FindDuplicateInMemory(base, element))
if (FindDuplicateInMemory(base, element, buildstate->index))
return;
/* Add element */
@@ -468,10 +471,14 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heaptid, Hn
HnswGraph *graph = buildstate->graph;
HnswElement element;
HnswAllocator *allocator = &buildstate->allocator;
Size valueSize;
IndexTuple itup;
Size itupSize;
IndexTuple itupPtr;
Pointer valuePtr;
LWLock *flushLock = &graph->flushLock;
char *base = buildstate->hnswarea;
TupleDesc tupdesc = HnswTupleDesc(index);
bool unused;
/* Detoast once for all calls */
Datum value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
@@ -484,7 +491,8 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heaptid, Hn
}
/* Get datum size */
valueSize = VARSIZE_ANY(DatumGetPointer(value));
itup = HnswFormIndexTuple(index, tupdesc, value, values, isnull);
itupSize = IndexTupleSize(itup);
/* Ensure graph not flushed when inserting */
LWLockAcquire(flushLock, LW_SHARED);
@@ -531,7 +539,7 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heaptid, Hn
/* Ok, we can proceed to allocate the element */
element = HnswInitElement(base, heaptid, buildstate->m, buildstate->ml, buildstate->maxLevel, allocator);
valuePtr = HnswAlloc(allocator, valueSize);
itupPtr = HnswAlloc(allocator, itupSize);
/*
* We have now allocated the space needed for the element, so we don't
@@ -540,8 +548,10 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heaptid, Hn
*/
LWLockRelease(&graph->allocatorLock);
/* Copy the datum */
memcpy(valuePtr, DatumGetPointer(value), valueSize);
/* Copy the index tuple */
memcpy(itupPtr, itup, itupSize);
HnswPtrStore(base, element->itup, itupPtr);
valuePtr = DatumGetPointer(index_getattr(itupPtr, 1, tupdesc, &unused));
HnswPtrStore(base, element->value, valuePtr);
/* Create a lock for the element */
@@ -666,6 +676,19 @@ InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, Index
buildstate->efConstruction = HnswGetEfConstruction(index);
buildstate->dimensions = TupleDescAttr(index->rd_att, 0)->atttypmod;
/* For now */
if (IndexRelationGetNumberOfKeyAttributes(index) > 2)
elog(ERROR, "index cannot have more than two columns");
if (!OidIsValid(index_getprocid(index, 1, HNSW_DISTANCE_PROC)))
elog(ERROR, "first column must be a vector");
for (int i = 1; i < IndexRelationGetNumberOfKeyAttributes(index); i++)
{
if (OidIsValid(index_getprocid(index, i + 1, HNSW_DISTANCE_PROC)))
elog(ERROR, "column %d cannot be a vector", i + 1);
}
/* Require column to have dimensions to be indexed */
if (buildstate->dimensions < 0)
elog(ERROR, "column does not have dimensions");

View File

@@ -136,9 +136,12 @@ AddElementOnDisk(Relation index, HnswElement e, int m, BlockNumber insertPage, B
OffsetNumber freeNeighborOffno = InvalidOffsetNumber;
BlockNumber newInsertPage = InvalidBlockNumber;
char *base = NULL;
bool useIndexTuple = IndexRelationGetNumberOfAttributes(index) > 1;
Pointer valuePtr = HnswPtrAccess(base, e->value);
IndexTuple itup = HnswPtrAccess(base, e->itup);
/* Calculate sizes */
etupSize = HNSW_ELEMENT_TUPLE_SIZE(VARSIZE_ANY(HnswPtrAccess(base, e->value)));
etupSize = HNSW_ELEMENT_TUPLE_SIZE(useIndexTuple ? IndexTupleSize(itup) : VARSIZE_ANY(valuePtr));
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m);
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
maxSize = HNSW_MAX_SIZE;
@@ -146,7 +149,7 @@ AddElementOnDisk(Relation index, HnswElement e, int m, BlockNumber insertPage, B
/* Prepare element tuple */
etup = palloc0(etupSize);
HnswSetElementTuple(base, etup, e);
HnswSetElementTuple(base, etup, e, useIndexTuple);
/* Prepare neighbor tuple */
ntup = palloc0(ntupSize);
@@ -355,9 +358,7 @@ HnswUpdateNeighborsOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, Hns
Buffer buf;
Page page;
GenericXLogState *state;
ItemId itemid;
HnswNeighborTuple ntup;
Size ntupSize;
int idx = -1;
int startIdx;
HnswElement neighborElement = HnswPtrAccess(base, hc->element);
@@ -396,9 +397,7 @@ HnswUpdateNeighborsOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, Hns
}
/* Get tuple */
itemid = PageGetItemId(page, offno);
ntup = (HnswNeighborTuple) PageGetItem(page, itemid);
ntupSize = ItemIdGetLength(itemid);
ntup = (HnswNeighborTuple) PageGetItem(page, PageGetItemId(page, offno));
/* Calculate index for update */
startIdx = (neighborElement->level - lc) * m;
@@ -427,13 +426,9 @@ HnswUpdateNeighborsOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, Hns
{
ItemPointer indextid = &ntup->indextids[idx];
/* Update neighbor */
/* Update neighbor on the buffer */
ItemPointerSet(indextid, e->blkno, e->offno);
/* Overwrite tuple */
if (!PageIndexTupleOverwrite(page, offno, (Item) ntup, ntupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */
if (building)
MarkBufferDirty(buf);
@@ -457,9 +452,7 @@ AddDuplicateOnDisk(Relation index, HnswElement element, HnswElement dup, bool bu
Buffer buf;
Page page;
GenericXLogState *state;
ItemId itemid;
HnswElementTuple etup;
Size etupSize;
int i;
/* Read page */
@@ -477,9 +470,7 @@ AddDuplicateOnDisk(Relation index, HnswElement element, HnswElement dup, bool bu
}
/* Find space */
itemid = PageGetItemId(page, dup->offno);
etup = (HnswElementTuple) PageGetItem(page, itemid);
etupSize = ItemIdGetLength(itemid);
etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, dup->offno));
for (i = 0; i < HNSW_HEAPTIDS; i++)
{
if (!ItemPointerIsValid(&etup->heaptids[i]))
@@ -495,13 +486,9 @@ AddDuplicateOnDisk(Relation index, HnswElement element, HnswElement dup, bool bu
return false;
}
/* Add heap TID */
/* Add heap TID, modifying the tuple on the page directly */
etup->heaptids[i] = element->heaptids[0];
/* Overwrite tuple */
if (!PageIndexTupleOverwrite(page, dup->offno, (Item) etup, etupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */
if (building)
MarkBufferDirty(buf);
@@ -520,16 +507,14 @@ FindDuplicateOnDisk(Relation index, HnswElement element, bool building)
{
char *base = NULL;
HnswNeighborArray *neighbors = HnswGetNeighbors(base, element, 0);
Datum value = HnswGetValue(base, element);
for (int i = 0; i < neighbors->length; i++)
{
HnswCandidate *neighbor = &neighbors->items[i];
HnswElement neighborElement = HnswPtrAccess(base, neighbor->element);
Datum neighborValue = HnswGetValue(base, neighborElement);
/* Exit early since ordered by distance */
if (!datumIsEqual(value, neighborValue, false, -1))
if (!HnswElementIsDuplicate(base, element, neighborElement, index))
return false;
if (AddDuplicateOnDisk(index, element, neighborElement, building))
@@ -580,6 +565,10 @@ HnswInsertTupleOnDisk(Relation index, Datum value, Datum *values, bool *isnull,
Oid collation = index->rd_indcollation[0];
LOCKMODE lockmode = ShareLock;
char *base = NULL;
TupleDesc tupdesc = HnswTupleDesc(index);
bool unused;
IndexTuple itup;
Pointer valuePtr;
/*
* Get a shared lock. This allows vacuum to ensure no in-flight inserts
@@ -593,7 +582,10 @@ HnswInsertTupleOnDisk(Relation index, Datum value, Datum *values, bool *isnull,
/* Create an element */
element = HnswInitElement(base, heap_tid, m, HnswGetMl(m), HnswGetMaxLevel(m), NULL);
HnswPtrStore(base, element->value, DatumGetPointer(value));
itup = HnswFormIndexTuple(index, tupdesc, value, values, isnull);
HnswPtrStore(base, element->itup, itup);
valuePtr = DatumGetPointer(index_getattr(itup, 1, tupdesc, &unused));
HnswPtrStore(base, element->value, valuePtr);
/* Prevent concurrent inserts when likely updating entry point */
if (entryPoint == NULL || element->level > entryPoint->level)

View File

@@ -33,11 +33,12 @@ GetScanItems(IndexScanDesc scan, Datum q)
for (int lc = entryPoint->level; lc >= 1; lc--)
{
w = HnswSearchLayer(base, q, ep, 1, lc, index, procinfo, collation, m, false, NULL);
w = HnswSearchLayer(base, q, NULL, ep, 1, lc, index, procinfo, collation, m, false, NULL);
ep = w;
}
return HnswSearchLayer(base, q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
/* Only pass scan to check matches for layer 0 */
return HnswSearchLayer(base, q, scan, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
}
/*
@@ -202,7 +203,7 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
MemoryContextSwitchTo(oldCtx);
scan->xs_heaptid = *heaptid;
scan->xs_recheck = false;
scan->xs_recheck = scan->numberOfKeys > 0;
scan->xs_recheckorderby = false;
return true;
}

View File

@@ -3,6 +3,7 @@
#include <math.h>
#include "access/generic_xlog.h"
#include "access/relscan.h"
#include "hnsw.h"
#include "lib/pairingheap.h"
#include "storage/bufmgr.h"
@@ -11,6 +12,10 @@
#include "utils/rel.h"
#include "vector.h"
#if PG_VERSION_NUM < 130000
#define TYPSTORAGE_PLAIN 'p'
#endif
#if PG_VERSION_NUM >= 130000
#include "common/hashfn.h"
#else
@@ -295,6 +300,82 @@ HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno)
return element;
}
/*
* Get the tuple descriptor
*/
TupleDesc
HnswTupleDesc(Relation index)
{
TupleDesc tupdesc = CreateTupleDescCopyConstr(RelationGetDescr(index));
/* Prevent compression */
TupleDescAttr(tupdesc, 0)->attstorage = TYPSTORAGE_PLAIN;
return tupdesc;
}
/*
* Form an index tuple
*/
IndexTuple
HnswFormIndexTuple(Relation index, TupleDesc tupdesc, Datum value, Datum *values, bool *isnull)
{
Size size = sizeof(Datum) * IndexRelationGetNumberOfAttributes(index);
Datum *newValues = palloc(size);
memcpy(newValues, values, size);
newValues[0] = value;
return index_form_tuple(tupdesc, newValues, isnull);
}
/*
* Check if elements are duplicates
*/
bool
HnswElementIsDuplicate(char *base, HnswElement a, HnswElement b, Relation index)
{
if (IndexRelationGetNumberOfAttributes(index) == 1)
{
Datum value = HnswGetValue(base, a);
Datum value2 = HnswGetValue(base, b);
return datumIsEqual(value, value2, false, -1);
}
else
{
TupleDesc tupdesc = RelationGetDescr(index);
IndexTuple itup = HnswPtrAccess(base, a->itup);
IndexTuple itup2 = HnswPtrAccess(base, b->itup);
for (int i = 0; i < tupdesc->natts; i++)
{
Datum value;
Datum value2;
bool isnull;
bool isnull2;
value = index_getattr(itup, i + 1, tupdesc, &isnull);
value2 = index_getattr(itup2, i + 1, tupdesc, &isnull2);
if (isnull || isnull2)
{
if (isnull != isnull2)
return false;
}
else
{
Form_pg_attribute att = TupleDescAttr(tupdesc, i);
if (!datumIsEqual(value, value2, att->attbyval, att->attlen))
return false;
}
}
return true;
}
}
/*
* Get the metapage info
*/
@@ -404,10 +485,8 @@ HnswUpdateMetaPage(Relation index, int updateEntry, HnswElement entryPoint, Bloc
* Set element tuple, except for neighbor info
*/
void
HnswSetElementTuple(char *base, HnswElementTuple etup, HnswElement element)
HnswSetElementTuple(char *base, HnswElementTuple etup, HnswElement element, bool useIndexTuple)
{
Pointer valuePtr = HnswPtrAccess(base, element->value);
etup->type = HNSW_ELEMENT_TUPLE_TYPE;
etup->level = element->level;
etup->deleted = 0;
@@ -418,7 +497,19 @@ HnswSetElementTuple(char *base, HnswElementTuple etup, HnswElement element)
else
ItemPointerSetInvalid(&etup->heaptids[i]);
}
memcpy(&etup->data, valuePtr, VARSIZE_ANY(valuePtr));
if (useIndexTuple)
{
IndexTuple itup = HnswPtrAccess(base, element->itup);
memcpy(&etup->data, itup, IndexTupleSize(itup));
}
else
{
Pointer valuePtr = HnswPtrAccess(base, element->value);
memcpy(&etup->data, valuePtr, VARSIZE_ANY(valuePtr));
}
}
/*
@@ -522,7 +613,7 @@ HnswLoadNeighbors(HnswElement element, Relation index, int m)
* Load an element from a tuple
*/
void
HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec)
HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec, Relation index)
{
element->level = etup->level;
element->deleted = etup->deleted;
@@ -545,17 +636,64 @@ HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHe
if (loadVec)
{
char *base = NULL;
Datum value = datumCopy(PointerGetDatum(&etup->data), false, -1);
HnswPtrStore(base, element->value, DatumGetPointer(value));
if (IndexRelationGetNumberOfAttributes(index) > 1)
{
TupleDesc tupdesc = RelationGetDescr(index);
bool unused;
IndexTuple itup = CopyIndexTuple((IndexTuple) &etup->data);
Datum value = index_getattr(itup, 1, tupdesc, &unused);
HnswPtrStore(base, element->itup, itup);
HnswPtrStore(base, element->value, DatumGetPointer(value));
}
else
{
Datum value = datumCopy(PointerGetDatum(&etup->data), false, -1);
HnswPtrStore(base, element->value, DatumGetPointer(value));
}
}
}
/*
* Check if an element matches
*/
static bool
HnswCheckMatches(Relation index, HnswElementTuple etup, IndexScanDesc scan)
{
if (scan == NULL)
return true;
for (int i = 0; i < scan->numberOfKeys; i++)
{
IndexTuple itup = (IndexTuple) &etup->data;
TupleDesc tupdesc = RelationGetDescr(index);
ScanKey key = &scan->keyData[i];
bool isnull;
Datum value = index_getattr(itup, key->sk_attno, tupdesc, &isnull);
bool attnull = key->sk_flags & SK_ISNULL;
if (isnull || attnull)
{
if (isnull != attnull)
return false;
}
else
{
if (!DatumGetBool(FunctionCall2Coll(&key->sk_func, key->sk_collation, value, key->sk_argument)))
return false;
}
}
return true;
}
/*
* Load an element and optionally get its distance from q
*/
void
HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec)
HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec, IndexScanDesc scan, bool *matches)
{
Buffer buf;
Page page;
@@ -571,11 +709,29 @@ HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index,
Assert(HnswIsElementTuple(etup));
/* Load element */
HnswLoadElementFromTuple(element, etup, true, loadVec);
HnswLoadElementFromTuple(element, etup, true, loadVec, index);
/* Calculate distance */
if (distance != NULL)
*distance = (float) DatumGetFloat8(FunctionCall2Coll(procinfo, collation, *q, PointerGetDatum(&etup->data)));
{
Datum value;
if (IndexRelationGetNumberOfAttributes(index) > 1)
{
IndexTuple itup = (IndexTuple) &etup->data;
TupleDesc tupdesc = RelationGetDescr(index);
bool unused;
value = index_getattr(itup, 1, tupdesc, &unused);
}
else
value = PointerGetDatum(&etup->data);
*distance = (float) DatumGetFloat8(FunctionCall2Coll(procinfo, collation, *q, value));
}
if (matches != NULL)
*matches = HnswCheckMatches(index, etup, scan);
UnlockReleaseBuffer(buf);
}
@@ -604,7 +760,7 @@ HnswEntryCandidate(char *base, HnswElement entryPoint, Datum q, Relation index,
if (index == NULL)
hc->distance = GetCandidateDistance(base, hc, q, procinfo, collation);
else
HnswLoadElement(entryPoint, &hc->distance, &q, index, procinfo, collation, loadVec);
HnswLoadElement(entryPoint, &hc->distance, &q, index, procinfo, collation, loadVec, NULL, NULL);
return hc;
}
@@ -722,12 +878,14 @@ CountElement(char *base, HnswElement skipElement, HnswCandidate * hc)
* Algorithm 2 from paper
*/
List *
HnswSearchLayer(char *base, Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement)
HnswSearchLayer(char *base, Datum q, IndexScanDesc scan, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement)
{
List *w = NIL;
pairingheap *C = pairingheap_allocate(CompareNearestCandidates, NULL);
pairingheap *W = pairingheap_allocate(CompareFurthestCandidates, NULL);
int wlen = 0;
uint64 additional = 0;
uint64 maxAdditional = (scan != NULL && scan->numberOfKeys > 0) ? 100 * ef : 0;
visited_hash v;
ListCell *lc2;
HnswNeighborArray *neighborhoodData = NULL;
@@ -799,14 +957,18 @@ HnswSearchLayer(char *base, Datum q, List *ep, int ef, int lc, Relation index, F
if (!visited)
{
float eDistance;
bool eMatches;
HnswElement eElement = HnswPtrAccess(base, e->element);
f = ((HnswPairingHeapNode *) pairingheap_first(W))->inner;
if (index == NULL)
{
eDistance = GetCandidateDistance(base, e, q, procinfo, collation);
eMatches = true;
}
else
HnswLoadElement(eElement, &eDistance, &q, index, procinfo, collation, inserting);
HnswLoadElement(eElement, &eDistance, &q, index, procinfo, collation, inserting, scan, &eMatches);
Assert(!eElement->deleted);
@@ -825,6 +987,16 @@ HnswSearchLayer(char *base, Datum q, List *ep, int ef, int lc, Relation index, F
pairingheap_add(C, &(CreatePairingHeapNode(ec)->ph_node));
pairingheap_add(W, &(CreatePairingHeapNode(ec)->ph_node));
/*
* Do not count elements that do not match filter towards
* ef
*/
if (!eMatches)
{
if ((++additional) <= maxAdditional)
continue;
}
/*
* Do not count elements being deleted towards ef when
* vacuuming. It would be ideal to do this for inserts as
@@ -1099,7 +1271,7 @@ HnswUpdateConnection(char *base, HnswElement element, HnswCandidate * hc, int lm
HnswElement hc3Element = HnswPtrAccess(base, hc3->element);
if (HnswPtrIsNull(base, hc3Element->value))
HnswLoadElement(hc3Element, &hc3->distance, &q, index, procinfo, collation, true);
HnswLoadElement(hc3Element, &hc3->distance, &q, index, procinfo, collation, true, NULL, NULL);
else
hc3->distance = GetCandidateDistance(base, hc3, q, procinfo, collation);
@@ -1221,7 +1393,7 @@ HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint
/* 1st phase: greedy search to insert level */
for (int lc = entryLevel; lc >= level + 1; lc--)
{
w = HnswSearchLayer(base, q, ep, 1, lc, index, procinfo, collation, m, true, skipElement);
w = HnswSearchLayer(base, q, NULL, ep, 1, lc, index, procinfo, collation, m, true, skipElement);
ep = w;
}
@@ -1239,7 +1411,7 @@ HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint
List *neighbors;
List *lw;
w = HnswSearchLayer(base, q, ep, efConstruction, lc, index, procinfo, collation, m, true, skipElement);
w = HnswSearchLayer(base, q, NULL, ep, efConstruction, lc, index, procinfo, collation, m, true, skipElement);
/* Elements being deleted or skipped can help with search */
/* but should be removed before selecting neighbors */

View File

@@ -60,8 +60,7 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
/* Iterate over nodes */
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
{
ItemId itemid = PageGetItemId(page, offno);
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, itemid);
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, offno));
int idx = 0;
bool itemUpdated = false;
@@ -92,15 +91,10 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
if (itemUpdated)
{
Size etupSize = ItemIdGetLength(itemid);
/* Mark rest as invalid */
for (int i = idx; i < HNSW_HEAPTIDS; i++)
ItemPointerSetInvalid(&etup->heaptids[i]);
if (!PageIndexTupleOverwrite(page, offno, (Item) etup, etupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
updated = true;
}
}
@@ -198,8 +192,8 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
FmgrInfo *procinfo = vacuumstate->procinfo;
Oid collation = vacuumstate->collation;
BufferAccessStrategy bas = vacuumstate->bas;
ItemId itemid;
HnswNeighborTuple ntup;
HnswNeighborTuple ntup = vacuumstate->ntup;
Size ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, m);
char *base = NULL;
/* Skip if element is entry point */
@@ -213,23 +207,23 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
/* Find neighbors for element, skipping itself */
HnswFindElementNeighbors(base, element, entryPoint, index, procinfo, collation, m, efConstruction, true);
/* Zero memory for each element */
MemSet(ntup, 0, HNSW_TUPLE_ALLOC_SIZE);
/* Update neighbor tuple */
/* Do this before getting page to minimize locking */
HnswSetNeighborTuple(base, ntup, element, m);
/* Get neighbor page */
buf = ReadBufferExtended(index, MAIN_FORKNUM, element->neighborPage, RBM_NORMAL, bas);
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
state = GenericXLogStart(index);
page = GenericXLogRegisterBuffer(state, buf, 0);
/* Get neighbor tuple */
itemid = PageGetItemId(page, element->neighborOffno);
ntup = (HnswNeighborTuple) PageGetItem(page, itemid);
/* Check expected size */
if (ItemIdGetLength(itemid) != HNSW_NEIGHBOR_TUPLE_SIZE(element->level, m))
/* Overwrite tuple */
if (!PageIndexTupleOverwrite(page, element->neighborOffno, (Item) ntup, ntupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Update page in-place */
HnswSetNeighborTuple(base, ntup, element, m);
/* Commit */
GenericXLogFinish(state);
UnlockReleaseBuffer(buf);
@@ -262,7 +256,7 @@ RepairGraphEntryPoint(HnswVacuumState * vacuumstate)
LockPage(index, HNSW_UPDATE_LOCK, ShareLock);
/* Load element */
HnswLoadElement(highestPoint, NULL, NULL, index, vacuumstate->procinfo, vacuumstate->collation, true);
HnswLoadElement(highestPoint, NULL, NULL, index, vacuumstate->procinfo, vacuumstate->collation, true, NULL, NULL);
/* Repair if needed */
if (NeedsUpdated(vacuumstate, highestPoint))
@@ -300,7 +294,7 @@ RepairGraphEntryPoint(HnswVacuumState * vacuumstate)
* is outdated, this can remove connections at higher levels in
* the graph until they are repaired, but this should be fine.
*/
HnswLoadElement(entryPoint, NULL, NULL, index, vacuumstate->procinfo, vacuumstate->collation, true);
HnswLoadElement(entryPoint, NULL, NULL, index, vacuumstate->procinfo, vacuumstate->collation, true, NULL, NULL);
if (NeedsUpdated(vacuumstate, entryPoint))
{
@@ -376,7 +370,7 @@ RepairGraph(HnswVacuumState * vacuumstate)
/* Create an element */
element = HnswInitElementFromBlock(blkno, offno);
HnswLoadElementFromTuple(element, etup, false, true);
HnswLoadElementFromTuple(element, etup, false, true, index);
elements = lappend(elements, element);
}
@@ -446,6 +440,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
BlockNumber insertPage = InvalidBlockNumber;
Relation index = vacuumstate->index;
BufferAccessStrategy bas = vacuumstate->bas;
bool useIndexTuple = IndexRelationGetNumberOfAttributes(index);
/*
* Wait for index scans to complete. Scans before this point may contain
@@ -482,11 +477,8 @@ MarkDeleted(HnswVacuumState * vacuumstate)
/* Update element and neighbors together */
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
{
ItemId itemid = PageGetItemId(page, offno);
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, itemid);
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, offno));
HnswNeighborTuple ntup;
Size etupSize;
Size ntupSize;
Buffer nbuf;
Page npage;
BlockNumber neighborPage;
@@ -510,10 +502,6 @@ MarkDeleted(HnswVacuumState * vacuumstate)
if (ItemPointerIsValid(&etup->heaptids[0]))
continue;
/* Calculate sizes */
etupSize = ItemIdGetLength(itemid);
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(etup->level, vacuumstate->m);
/* Get neighbor page */
neighborPage = ItemPointerGetBlockNumber(&etup->neighbortid);
neighborOffno = ItemPointerGetOffsetNumber(&etup->neighbortid);
@@ -534,19 +522,27 @@ MarkDeleted(HnswVacuumState * vacuumstate)
/* Overwrite element */
etup->deleted = 1;
MemSet(&etup->data, 0, VARSIZE_ANY(&etup->data));
if (useIndexTuple)
{
IndexTuple itup = (IndexTuple) &etup->data;
MemSet(itup, 0, IndexTupleSize(itup));
}
else
{
Vector *vec = (Vector *) (&etup->data);
MemSet(vec, 0, VARSIZE_ANY(vec));
}
/* Overwrite neighbors */
for (int i = 0; i < ntup->count; i++)
ItemPointerSetInvalid(&ntup->indextids[i]);
/* Overwrite element tuple */
if (!PageIndexTupleOverwrite(page, offno, (Item) etup, etupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Overwrite neighbor tuple */
if (!PageIndexTupleOverwrite(npage, neighborOffno, (Item) ntup, ntupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/*
* We modified the tuples in place, no need to call
* PageIndexTupleOverwrite
*/
/* Commit */
GenericXLogFinish(state);
@@ -591,6 +587,7 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
vacuumstate->bas = GetAccessStrategy(BAS_BULKREAD);
vacuumstate->procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
vacuumstate->collation = index->rd_indcollation[0];
vacuumstate->ntup = palloc0(HNSW_TUPLE_ALLOC_SIZE);
vacuumstate->tmpCtx = AllocSetContextCreate(CurrentMemoryContext,
"Hnsw vacuum temporary context",
ALLOCSET_DEFAULT_SIZES);
@@ -610,6 +607,7 @@ FreeVacuumState(HnswVacuumState * vacuumstate)
{
tidhash_destroy(vacuumstate->deleted);
FreeAccessStrategy(vacuumstate->bas);
pfree(vacuumstate->ntup);
MemoryContextDelete(vacuumstate->tmpCtx);
}

View File

@@ -866,9 +866,10 @@ vector_mul(PG_FUNCTION_ARGS)
int
vector_cmp_internal(Vector * a, Vector * b)
{
CheckDims(a, b);
int dim = Min(a->dim, b->dim);
for (int i = 0; i < a->dim; i++)
/* Check values before dimensions to be consistent with Postgres arrays */
for (int i = 0; i < dim; i++)
{
if (a->x[i] < b->x[i])
return -1;
@@ -876,6 +877,13 @@ vector_cmp_internal(Vector * a, Vector * b)
if (a->x[i] > b->x[i])
return 1;
}
if (a->dim < b->dim)
return -1;
if (a->dim > b->dim)
return 1;
return 0;
}
@@ -889,6 +897,9 @@ vector_lt(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) < 0);
}
@@ -902,6 +913,9 @@ vector_le(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) <= 0);
}
@@ -915,6 +929,9 @@ vector_eq(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) == 0);
}
@@ -928,6 +945,9 @@ vector_ne(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) != 0);
}
@@ -941,6 +961,9 @@ vector_ge(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) >= 0);
}
@@ -954,6 +977,9 @@ vector_gt(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) > 0);
}

View File

@@ -24,6 +24,56 @@ SELECT '[1e37]'::vector * '[1e37]';
ERROR: value out of range: overflow
SELECT '[1e-37]'::vector * '[1e-37]';
ERROR: value out of range: underflow
SELECT '[1,2,3]'::vector = '[1,2,3]';
?column?
----------
t
(1 row)
SELECT '[1,2,3]'::vector = '[1,2]';
ERROR: different vector dimensions 3 and 2
SELECT vector_cmp('[1,2,3]', '[1,2,3]');
vector_cmp
------------
0
(1 row)
SELECT vector_cmp('[1,2,3]', '[0,0,0]');
vector_cmp
------------
1
(1 row)
SELECT vector_cmp('[0,0,0]', '[1,2,3]');
vector_cmp
------------
-1
(1 row)
SELECT vector_cmp('[1,2]', '[1,2,3]');
vector_cmp
------------
-1
(1 row)
SELECT vector_cmp('[1,2,3]', '[1,2]');
vector_cmp
------------
1
(1 row)
SELECT vector_cmp('[1,2]', '[2,3,4]');
vector_cmp
------------
-1
(1 row)
SELECT vector_cmp('[2,3]', '[1,2,3]');
vector_cmp
------------
1
(1 row)
SELECT vector_dims('[1,2,3]');
vector_dims
-------------

View File

@@ -6,6 +6,17 @@ SELECT '[1,2,3]'::vector * '[4,5,6]';
SELECT '[1e37]'::vector * '[1e37]';
SELECT '[1e-37]'::vector * '[1e-37]';
SELECT '[1,2,3]'::vector = '[1,2,3]';
SELECT '[1,2,3]'::vector = '[1,2]';
SELECT vector_cmp('[1,2,3]', '[1,2,3]');
SELECT vector_cmp('[1,2,3]', '[0,0,0]');
SELECT vector_cmp('[0,0,0]', '[1,2,3]');
SELECT vector_cmp('[1,2]', '[1,2,3]');
SELECT vector_cmp('[1,2,3]', '[1,2]');
SELECT vector_cmp('[1,2]', '[2,3,4]');
SELECT vector_cmp('[2,3]', '[1,2,3]');
SELECT vector_dims('[1,2,3]');
SELECT round(vector_norm('[1,1]')::numeric, 5);

View File

@@ -0,0 +1,113 @@
use strict;
use warnings;
use PostgresNode;
use TestLib;
use Test::More;
my $node;
my @queries = ();
my @cs = ();
my @expected;
my $limit = 20;
my $dim = 3;
my $array_sql = join(",", ('random()') x $dim);
my $nc = 50;
sub test_recall
{
my ($min, $operator) = @_;
my $correct = 0;
my $total = 0;
my $explain = $node->safe_psql("postgres", qq(
SET enable_seqscan = off;
EXPLAIN ANALYZE SELECT i FROM tst WHERE c = '$cs[0]' ORDER BY v $operator '$queries[0]' LIMIT $limit;
));
like($explain, qr/Index Cond/);
for my $i (0 .. $#queries)
{
my $actual = $node->safe_psql("postgres", qq(
SET enable_seqscan = off;
SELECT i FROM tst WHERE c = '$cs[$i]' ORDER BY v $operator '$queries[$i]' LIMIT $limit;
));
my @actual_ids = split("\n", $actual);
my %actual_set = map { $_ => 1 } @actual_ids;
is(scalar(@actual_ids), $limit);
my @expected_ids = split("\n", $expected[$i]);
foreach (@expected_ids)
{
if (exists($actual_set{$_}))
{
$correct++;
}
$total++;
}
}
cmp_ok($correct / $total, ">=", $min, $operator);
}
# Initialize node
$node = get_new_node('node');
$node->init;
$node->start;
# Create table
$node->safe_psql("postgres", "CREATE EXTENSION vector;");
$node->safe_psql("postgres", "CREATE TABLE tst (i int4, v vector($dim), c text);");
$node->safe_psql("postgres",
"INSERT INTO tst SELECT i, ARRAY[$array_sql], i % $nc FROM generate_series(1, 10000) i;"
);
$node->safe_psql("postgres", "CREATE INDEX ON tst USING hnsw (v vector_l2_ops, c);");
$node->safe_psql("postgres",
"INSERT INTO tst SELECT i, ARRAY[$array_sql], (i % $nc)::text FROM generate_series(1, 10000) i;"
);
# Generate queries
for (1 .. 20)
{
my @r = ();
for (1 .. $dim)
{
push(@r, rand());
}
push(@queries, "[" . join(",", @r) . "]");
push(@cs, int(rand() * $nc));
}
# Get exact results
@expected = ();
for my $i (0 .. $#queries)
{
my $res = $node->safe_psql("postgres", qq(
SET enable_indexscan = off;
SELECT i FROM tst WHERE c = '$cs[$i]' ORDER BY v <-> '$queries[$i]' LIMIT $limit;
));
push(@expected, $res);
}
# Test recall
test_recall(0.99, '<->');
# Test vacuum
$node->safe_psql("postgres", "DELETE FROM tst WHERE c > '5';");
$node->safe_psql("postgres", "VACUUM tst;");
# Test columns
my ($ret, $stdout, $stderr) = $node->psql("postgres", "CREATE INDEX ON tst USING hnsw (c);");
like($stderr, qr/first column must be a vector/);
($ret, $stdout, $stderr) = $node->psql("postgres", "CREATE INDEX ON tst USING hnsw (c, v vector_l2_ops);");
like($stderr, qr/first column must be a vector/);
($ret, $stdout, $stderr) = $node->psql("postgres", "CREATE INDEX ON tst USING hnsw (v vector_l2_ops, c, c);");
like($stderr, qr/index cannot have more than two columns/);
($ret, $stdout, $stderr) = $node->psql("postgres", "CREATE INDEX ON tst USING hnsw (v vector_l2_ops, v vector_l2_ops);");
like($stderr, qr/column 2 cannot be a vector/);
done_testing();

View File

@@ -1,4 +1,4 @@
comment = 'vector data type and ivfflat and hnsw access methods'
default_version = '0.5.1'
default_version = '0.6.0'
module_pathname = '$libdir/vector'
relocatable = true