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48 Commits

Author SHA1 Message Date
Andrew Kane
c207a2d50e Reduced lock contention with parallel HNSW index builds 2024-03-11 19:50:48 -07:00
Andrew Kane
569fd36396 Improved performance of parallel HNSW index builds 2024-03-11 18:32:39 -07:00
Andrew Kane
62350b1589 Added note about IVFFlat results [skip ci] 2024-03-06 00:29:55 -08:00
Andrew Kane
dd57309281 Added section about HNSW results - #480 [skip ci] 2024-03-06 00:27:50 -08:00
Andrew Kane
c6ddf62a29 Version bump to 0.6.1 [skip ci] 2024-03-04 10:27:59 -08:00
Andrew Kane
801be04d8b Updated CI [skip ci] 2024-03-02 17:06:11 -08:00
Andrew Kane
587e9ba97c Added link to bulk loading example [skip ci] 2024-02-29 21:25:11 -08:00
Andrew Kane
d57047a935 Moved COPY example and added FORMAT [skip ci] 2024-02-29 20:35:01 -08:00
oneturkmen
f1db1f17e3 Update README.md (#472) 2024-02-29 20:27:53 -08:00
Andrew Kane
2f48c0fac4 Updated changelog [skip ci] 2024-02-29 18:10:19 -08:00
Andrew Kane
84a8aa8176 Added note about HNSW build time [skip ci] 2024-02-29 16:25:58 -08:00
Andrew Kane
f64ebbef50 Added OPTFLAGS to readme [skip ci] 2024-02-29 16:15:22 -08:00
Andrew Kane
ac8156509b Updated vector operators for <= and >= 2024-02-29 15:43:29 -08:00
Andrew Kane
82bf69b479 Fixed vector subtraction being marked as commutative - fixes #475 2024-02-29 14:36:18 -08:00
Andrew Kane
4be2f57916 Updated license year [skip ci] 2024-02-29 13:44:58 -08:00
Andrew Kane
91e3d2905f Fixed sort function for Postgres 12 2024-02-28 16:26:41 -08:00
Andrew Kane
fe2406564f Replaced pairing heap with array in SelectNeighbors - closes #447
Co-authored-by: Heikki Linnakangas <heikki.linnakangas@iki.fi>
2024-02-28 15:47:26 -08:00
Andrew Kane
fa52511eaa Fixed closer caching for Postgres 12 2024-02-28 15:44:38 -08:00
Andrew Kane
447ef4d27a Specify Postgres version for Valgrind [skip ci] 2024-02-28 14:16:48 -08:00
Andrew Kane
b36cd22ccc Enable assertions on CI 2024-02-28 14:15:34 -08:00
Andrew Kane
b447ae4989 Avoid base address for relptr for Postgres < 14.5 2024-02-28 14:10:14 -08:00
Andrew Kane
efed873a3e Revert "Replaced pairing heap with array in SelectNeighbors - closes #447"
This reverts commit 14b278dec9.
2024-02-28 11:33:14 -08:00
Andrew Kane
14b278dec9 Replaced pairing heap with array in SelectNeighbors - closes #447
Co-authored-by: Heikki Linnakangas <heikki.linnakangas@iki.fi>
2024-02-28 11:25:12 -08:00
Andrew Kane
133a728e48 Updated changelog [skip ci] 2024-02-20 16:38:05 -08:00
Andrew Kane
ca10cbaa7d Revert "Remove offsethash"
This reverts commit 1cbd204f52.
2024-02-20 16:07:32 -08:00
Andrew Kane
eb29019a14 Revert "Eliminate a few HnswPtrAccess invocations"
This reverts commit 334c386a45.
2024-02-20 16:07:21 -08:00
Heikki Linnakangas
334c386a45 Eliminate a few HnswPtrAccess invocations
HnswPtrAccess() is pretty cheap, but it stills seems worthwhile to
avoid repeated calls in the hot paths when it can be easily avoided.
2024-02-19 14:13:18 +02:00
Heikki Linnakangas
1cbd204f52 Remove offsethash
The original motivation was to eliminate the superfluous HnswPtrAccess
call from AddToVisited. The caller has to call HnswPtrAccess() anyway,
so it makes sense to pass the HnswElement rather than HnswElementPtr
to AddToVisited(). But then I realized that we can use the
pointer-variant even with shared memory, because the visited-hash is
backend-private, and the addresses where the elements are mapped to in
shared memory are stable within the backend.
2024-02-19 14:12:26 +02:00
Andrew Kane
5ba62fca84 Fixed crash with shared_preload_libraries - fixes #460 2024-02-14 17:13:30 -08:00
Andrew Kane
22cb2a3fe7 Simplified Docker tasks [skip ci] 2024-02-07 12:03:33 -08:00
Andrew Kane
72b144906a Added Valgrind to CI 2024-02-07 09:43:01 -08:00
Andrew Kane
a618c1bc78 Updated port name [skip ci] 2024-02-06 12:43:20 -08:00
Andrew Kane
f43cd0ed98 Improved type [skip ci] 2024-02-05 19:38:52 -08:00
Andrew Kane
51df640961 Added instructions for pkg [skip ci] 2024-02-05 17:01:36 -08:00
Andrew Kane
2716a223a6 Fixed error with ANALYZE and vectors with different dimensions - fixes #451 2024-02-02 10:47:48 -08:00
Andrew Kane
3697043898 Added note about vacuuming - closes #450 [skip ci] 2024-01-31 14:35:27 -08:00
Andrew Kane
c22740962c Added note for Docker [skip ci] 2024-01-29 15:33:29 -08:00
Andrew Kane
a55ecf3281 Updated changelog [skip ci] 2024-01-29 11:20:33 -08:00
Andrew Kane
fecdd5794e Updated readme [skip ci] 2024-01-29 10:57:54 -08:00
Andrew Kane
281d4fcf60 Version bump to 0.6.0 [skip ci] 2024-01-29 10:54:44 -08:00
Andrew Kane
5b43aaad5a Removed unneeded item ids 2024-01-28 23:14:52 -08:00
Andrew Kane
797ce8034c Ran pgindent [skip ci] 2024-01-28 23:03:48 -08:00
Andrew Kane
cad9e22d9a Updated variable name to be consistent with CreateGraphPages [skip ci] 2024-01-28 23:02:13 -08:00
Andrew Kane
a7d43904f7 Zero memory for each element 2024-01-28 23:00:39 -08:00
Andrew Kane
ded649891b DRY HNSW tuple alloc size [skip ci] 2024-01-28 22:58:38 -08:00
Heikki Linnakangas
2d092016fc Remove unnecessary PageIndexTupleOverwrite calls that caused UB (#438)
These places called PageIndexTupleOverwrite(), with the new tuple
pointing directly to the original page. The PageIndexTupleOverwrite()
call is unnecessary in these cases, as we have already modified the
tuple on the page directly. Moreover, PageIndexTupleOverWrite() will
call memcpy with same src and dst arguments, which is undefined
behavior.

It's OK to modify the pages on disk directly, and we don't need
critical sections, because we either use the generic xlog functions
which create a temporary copy of the page, or we are building a new
index so if we crash the whole index is invisible and will be dropped
anyway.
2024-01-28 22:52:56 -08:00
Andrew Kane
86b31fdf96 Revert "Update neighbor tuples in-place for HNSW index build"
This reverts commit 270dd8189a.
2024-01-28 22:18:22 -08:00
Andrew Kane
5023269f0d Updated changelog [skip ci] 2024-01-28 21:42:30 -08:00
20 changed files with 298 additions and 125 deletions

View File

@@ -28,7 +28,7 @@ jobs:
dev-files: true
- run: make
env:
PG_CFLAGS: -Wall -Wextra -Werror -Wno-unused-parameter -Wno-sign-compare
PG_CFLAGS: -DUSE_ASSERT_CHECKING -Wall -Wextra -Werror -Wno-unused-parameter -Wno-sign-compare
- run: |
export PG_CONFIG=`which pg_config`
sudo --preserve-env=PG_CONFIG make install
@@ -49,7 +49,7 @@ jobs:
postgres-version: 14
- run: make
env:
PG_CFLAGS: -Wall -Wextra -Werror -Wno-unused-parameter
PG_CFLAGS: -DUSE_ASSERT_CHECKING -Wall -Wextra -Werror -Wno-unused-parameter
- run: make install
- run: make installcheck
- if: ${{ failure() }}
@@ -60,7 +60,9 @@ jobs:
wget -q https://github.com/postgres/postgres/archive/refs/tags/REL_14_10.tar.gz
tar xf REL_14_10.tar.gz
- run: make prove_installcheck PROVE_FLAGS="-I ./postgres-REL_14_10/src/test/perl" PERL5LIB="/Users/runner/perl5/lib/perl5"
- run: make clean && /usr/local/opt/llvm@15/bin/scan-build --status-bugs make PG_CFLAGS="-DUSE_ASSERT_CHECKING"
- run: make clean && /usr/local/opt/llvm@15/bin/scan-build --status-bugs make
env:
PG_CFLAGS: -DUSE_ASSERT_CHECKING
windows:
runs-on: windows-latest
if: ${{ !startsWith(github.ref_name, 'mac') }}
@@ -97,4 +99,15 @@ jobs:
sudo -u postgres make installcheck
sudo -u postgres make prove_installcheck
env:
PG_CFLAGS: -Wall -Wextra -Werror -Wno-unused-parameter -Wno-sign-compare
PG_CFLAGS: -DUSE_ASSERT_CHECKING -Wall -Wextra -Werror -Wno-unused-parameter -Wno-sign-compare
valgrind:
if: ${{ !startsWith(github.ref_name, 'mac') && !startsWith(github.ref_name, 'windows') }}
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: ankane/setup-postgres-valgrind@v1
with:
postgres-version: 16
- run: make
- run: sudo --preserve-env=PG_CONFIG make install
- run: make installcheck

View File

@@ -1,11 +1,21 @@
## 0.6.0 (unreleased)
## 0.6.2 (unreleased)
If upgrading with Postgres 12 or Docker, see [these notes](https://github.com/pgvector/pgvector#060-unreleased).
- Reduced lock contention with parallel HNSW index builds
## 0.6.1 (2024-03-04)
- Fixed error with `ANALYZE` and vectors with different dimensions
- Fixed error with `shared_preload_libraries`
- Fixed vector subtraction being marked as commutative
## 0.6.0 (2024-01-29)
If upgrading with Postgres 12 or Docker, see [these notes](https://github.com/pgvector/pgvector#060).
- Changed storage for vector from `extended` to `external`
- Improved performance of HNSW
- Added support for parallel index builds for HNSW
- Added validation for GUC parameters
- Changed storage for vector from `extended` to `external`
- Improved performance of HNSW
- Reduced memory usage for HNSW index builds
- Reduced WAL generation for HNSW index builds
- Fixed error with logical replication

View File

@@ -1,4 +1,4 @@
ARG PG_MAJOR=15
ARG PG_MAJOR=16
FROM postgres:$PG_MAJOR
ARG PG_MAJOR

View File

@@ -1,4 +1,4 @@
Portions Copyright (c) 1996-2023, PostgreSQL Global Development Group
Portions Copyright (c) 1996-2024, PostgreSQL Global Development Group
Portions Copyright (c) 1994, The Regents of the University of California

View File

@@ -2,7 +2,7 @@
"name": "vector",
"abstract": "Open-source vector similarity search for Postgres",
"description": "Supports L2 distance, inner product, and cosine distance",
"version": "0.5.1",
"version": "0.6.1",
"maintainer": [
"Andrew Kane <andrew@ankane.org>"
],
@@ -20,7 +20,7 @@
"vector": {
"file": "sql/vector.sql",
"docfile": "README.md",
"version": "0.5.1",
"version": "0.6.1",
"abstract": "Open-source vector similarity search for Postgres"
}
},

View File

@@ -1,5 +1,5 @@
EXTENSION = vector
EXTVERSION = 0.5.1
EXTVERSION = 0.6.1
MODULE_big = vector
DATA = $(wildcard sql/*--*.sql)
@@ -71,11 +71,9 @@ PG_MAJOR ?= 16
.PHONY: docker
docker:
docker build --pull --no-cache --build-arg PG_MAJOR=$(PG_MAJOR) -t pgvector/pgvector:pg$(PG_MAJOR) .
docker build --build-arg PG_MAJOR=$(PG_MAJOR) -t pgvector/pgvector:$(EXTVERSION)-pg$(PG_MAJOR) .
docker build --pull --no-cache --build-arg PG_MAJOR=$(PG_MAJOR) -t pgvector/pgvector:pg$(PG_MAJOR) -t pgvector/pgvector:$(EXTVERSION)-pg$(PG_MAJOR) .
.PHONY: docker-release
docker-release:
docker buildx build --push --pull --no-cache --platform linux/amd64,linux/arm64 --build-arg PG_MAJOR=$(PG_MAJOR) -t pgvector/pgvector:pg$(PG_MAJOR) .
docker buildx build --push --platform linux/amd64,linux/arm64 --build-arg PG_MAJOR=$(PG_MAJOR) -t pgvector/pgvector:$(EXTVERSION)-pg$(PG_MAJOR) .
docker buildx build --push --pull --no-cache --platform linux/amd64,linux/arm64 --build-arg PG_MAJOR=$(PG_MAJOR) -t pgvector/pgvector:pg$(PG_MAJOR) -t pgvector/pgvector:$(EXTVERSION)-pg$(PG_MAJOR) .

View File

@@ -1,5 +1,5 @@
EXTENSION = vector
EXTVERSION = 0.5.1
EXTVERSION = 0.6.1
OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\vector.obj
HEADERS = src\vector.h

View File

@@ -16,11 +16,11 @@ Plus [ACID](https://en.wikipedia.org/wiki/ACID) compliance, point-in-time recove
### Linux and Mac
Compile and install the extension (supports Postgres 11+)
Compile and install the extension (supports Postgres 12+)
```sh
cd /tmp
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
git clone --branch v0.6.1 https://github.com/pgvector/pgvector.git
cd pgvector
make
make install # may need sudo
@@ -28,7 +28,7 @@ make install # may need sudo
See the [installation notes](#installation-notes) if you run into issues
You can also install it with [Docker](#docker), [Homebrew](#homebrew), [PGXN](#pgxn), [APT](#apt), [Yum](#yum), or [conda-forge](#conda-forge), and it comes preinstalled with [Postgres.app](#postgresapp) and many [hosted providers](#hosted-postgres). There are also instructions for [GitHub Actions](https://github.com/pgvector/setup-pgvector).
You can also install it with [Docker](#docker), [Homebrew](#homebrew), [PGXN](#pgxn), [APT](#apt), [Yum](#yum), [pkg](#pkg), or [conda-forge](#conda-forge), and it comes preinstalled with [Postgres.app](#postgresapp) and many [hosted providers](#hosted-postgres). There are also instructions for [GitHub Actions](https://github.com/pgvector/setup-pgvector).
### Windows
@@ -44,7 +44,7 @@ Then use `nmake` to build:
```cmd
set "PGROOT=C:\Program Files\PostgreSQL\16"
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
git clone --branch v0.6.1 https://github.com/pgvector/pgvector.git
cd pgvector
nmake /F Makefile.win
nmake /F Makefile.win install
@@ -102,6 +102,12 @@ Insert vectors
INSERT INTO items (embedding) VALUES ('[1,2,3]'), ('[4,5,6]');
```
Or load vectors in bulk using `COPY` ([example](https://github.com/pgvector/pgvector-python/blob/master/examples/bulk_loading.py))
```sql
COPY items (embedding) FROM STDIN WITH (FORMAT BINARY);
```
Upsert vectors
```sql
@@ -264,7 +270,9 @@ HINT: Increase maintenance_work_mem to speed up builds.
Note: Do not set `maintenance_work_mem` so high that it exhausts the memory on the server
Starting with 0.6.0 [unreleased], you can also speed up index creation by increasing the number of parallel workers (2 by default)
Like other index types, its faster to create an index after loading your initial data
Starting with 0.6.0, you can also speed up index creation by increasing the number of parallel workers (2 by default)
```sql
SET max_parallel_maintenance_workers = 7; -- plus leader
@@ -430,6 +438,15 @@ To speed up queries with an IVFFlat index, increase the number of inverted lists
CREATE INDEX ON items USING ivfflat (embedding vector_l2_ops) WITH (lists = 1000);
```
## Vacuuming
Vacuuming can take a while for HNSW indexes. Speed it up by reindexing first.
```sql
REINDEX INDEX CONCURRENTLY index_name;
VACUUM table_name;
```
## Languages
Use pgvector from any language with a Postgres client. You can even generate and store vectors in one language and query them in another.
@@ -564,6 +581,10 @@ or choose to store vectors inline:
ALTER TABLE items ALTER COLUMN embedding SET STORAGE PLAIN;
```
#### Why are there less results for a query after adding an HNSW index?
Results are limited by the size of the dynamic candidate list (`hnsw.ef_search`). There may be even less results due to dead tuples or filtering conditions in the query. We recommend setting `hnsw.ef_search` to at least twice the `LIMIT` of the query. If you need more than 500 results, use an IVFFlat index instead.
#### Why are there less results for a query after adding an IVFFlat index?
The index was likely created with too little data for the number of lists. Drop the index until the table has more data.
@@ -572,6 +593,8 @@ The index was likely created with too little data for the number of lists. Drop
DROP INDEX index_name;
```
Results can also be limited by the number of probes (`ivfflat.probes`).
## Reference
### Vector Type
@@ -647,24 +670,32 @@ Note: Replace `16` with your Postgres server version
If compilation fails and the output includes `warning: no such sysroot directory` on Mac, reinstall Xcode Command Line Tools.
### Portability
To compile for portability, use:
```sh
make OPTFLAGS=""
```
## Additional Installation Methods
### Docker
Get the [Docker image](https://hub.docker.com/r/ankane/pgvector) with:
Get the [Docker image](https://hub.docker.com/r/pgvector/pgvector) with:
```sh
docker pull ankane/pgvector
docker pull pgvector/pgvector:pg16
```
This adds pgvector to the [Postgres image](https://hub.docker.com/_/postgres) (run it the same way).
This adds pgvector to the [Postgres image](https://hub.docker.com/_/postgres) (replace `16` with your Postgres server version, and run it the same way).
You can also build the image manually:
```sh
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
git clone --branch v0.6.1 https://github.com/pgvector/pgvector.git
cd pgvector
docker build --build-arg PG_MAJOR=15 -t myuser/pgvector .
docker build --build-arg PG_MAJOR=16 -t myuser/pgvector .
```
### Homebrew
@@ -707,6 +738,21 @@ sudo dnf install pgvector_16
Note: Replace `16` with your Postgres server version
### pkg
Install the FreeBSD package with:
```sh
pkg install postgresql15-pg_vector
```
or the port with:
```sh
cd /usr/ports/databases/pgvector
make install
```
### conda-forge
With Conda Postgres, install from [conda-forge](https://anaconda.org/conda-forge/pgvector) with:
@@ -741,7 +787,7 @@ SELECT extversion FROM pg_extension WHERE extname = 'vector';
## Upgrade Notes
### 0.6.0 [unreleased]
### 0.6.0
#### Postgres 12

View File

@@ -0,0 +1,16 @@
-- complain if script is sourced in psql, rather than via CREATE EXTENSION
\echo Use "ALTER EXTENSION vector UPDATE TO '0.6.1'" to load this file. \quit
DROP OPERATOR - (vector, vector);
CREATE OPERATOR - (
LEFTARG = vector, RIGHTARG = vector, PROCEDURE = vector_sub
);
ALTER OPERATOR <= (vector, vector) SET (
RESTRICT = scalarlesel, JOIN = scalarlejoinsel
);
ALTER OPERATOR >= (vector, vector) SET (
RESTRICT = scalargesel, JOIN = scalargejoinsel
);

View File

@@ -180,8 +180,7 @@ CREATE OPERATOR + (
);
CREATE OPERATOR - (
LEFTARG = vector, RIGHTARG = vector, PROCEDURE = vector_sub,
COMMUTATOR = -
LEFTARG = vector, RIGHTARG = vector, PROCEDURE = vector_sub
);
CREATE OPERATOR * (
@@ -195,11 +194,10 @@ CREATE OPERATOR < (
RESTRICT = scalarltsel, JOIN = scalarltjoinsel
);
-- should use scalarlesel and scalarlejoinsel, but not supported in Postgres < 11
CREATE OPERATOR <= (
LEFTARG = vector, RIGHTARG = vector, PROCEDURE = vector_le,
COMMUTATOR = >= , NEGATOR = > ,
RESTRICT = scalarltsel, JOIN = scalarltjoinsel
RESTRICT = scalarlesel, JOIN = scalarlejoinsel
);
CREATE OPERATOR = (
@@ -214,11 +212,10 @@ CREATE OPERATOR <> (
RESTRICT = eqsel, JOIN = eqjoinsel
);
-- should use scalargesel and scalargejoinsel, but not supported in Postgres < 11
CREATE OPERATOR >= (
LEFTARG = vector, RIGHTARG = vector, PROCEDURE = vector_ge,
COMMUTATOR = <= , NEGATOR = < ,
RESTRICT = scalargtsel, JOIN = scalargtjoinsel
RESTRICT = scalargesel, JOIN = scalargejoinsel
);
CREATE OPERATOR > (

View File

@@ -8,6 +8,7 @@
#include "commands/progress.h"
#include "commands/vacuum.h"
#include "hnsw.h"
#include "miscadmin.h"
#include "utils/guc.h"
#include "utils/selfuncs.h"
@@ -28,7 +29,7 @@ static relopt_kind hnsw_relopt_kind;
* this grows bigger, we should use a shmem_request_hook and
* RequestAddinShmemSpace() to pre-reserve space for this.
*/
static void
void
HnswInitLockTranche(void)
{
int *tranche_ids;
@@ -53,7 +54,8 @@ HnswInitLockTranche(void)
void
HnswInit(void)
{
HnswInitLockTranche();
if (!process_shared_preload_libraries_in_progress)
HnswInitLockTranche();
hnsw_relopt_kind = add_reloption_kind();
add_int_reloption(hnsw_relopt_kind, "m", "Max number of connections",

View File

@@ -60,6 +60,7 @@
#define PROGRESS_HNSW_PHASE_LOAD 2
#define HNSW_MAX_SIZE (BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - sizeof(ItemIdData))
#define HNSW_TUPLE_ALLOC_SIZE BLCKSZ
#define HNSW_ELEMENT_TUPLE_SIZE(size) MAXALIGN(offsetof(HnswElementTupleData, data) + (size))
#define HNSW_NEIGHBOR_TUPLE_SIZE(level, m) MAXALIGN(offsetof(HnswNeighborTupleData, indextids) + ((level) + 2) * (m) * sizeof(ItemPointerData))
@@ -79,7 +80,7 @@
#if PG_VERSION_NUM < 130000
#define list_delete_last(list) list_truncate(list, list_length(list) - 1)
#define list_sort(list, cmp) list_qsort(list, cmp)
#define list_sort(list, cmp) ((list) = list_qsort(list, cmp))
#endif
#define HnswIsElementTuple(tup) ((tup)->type == HNSW_ELEMENT_TUPLE_TYPE)
@@ -184,6 +185,7 @@ typedef struct HnswGraph
/* Entry state */
LWLock entryLock;
LWLock entryWaitLock;
HnswElementPtr entryPoint;
/* Allocations state */
@@ -354,6 +356,7 @@ typedef struct HnswVacuumState
/* Variables */
struct tidhash_hash *deleted;
BufferAccessStrategy bas;
HnswNeighborTuple ntup;
HnswElementData highestPoint;
/* Memory */
@@ -387,6 +390,7 @@ void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation i
void HnswSetElementTuple(char *base, HnswElementTuple etup, HnswElement element);
void HnswUpdateConnection(char *base, HnswElement element, HnswCandidate * hc, int lm, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
void HnswLoadNeighbors(HnswElement element, Relation index, int m);
void HnswInitLockTranche(void);
PGDLLEXPORT void HnswParallelBuildMain(dsm_segment *seg, shm_toc *toc);
/* Index access methods */

View File

@@ -148,7 +148,6 @@ CreateGraphPages(HnswBuildState * buildstate)
{
Relation index = buildstate->index;
ForkNumber forkNum = buildstate->forkNum;
Size etupAllocSize;
Size maxSize;
HnswElementTuple etup;
HnswNeighborTuple ntup;
@@ -160,12 +159,11 @@ CreateGraphPages(HnswBuildState * buildstate)
char *base = buildstate->hnswarea;
/* Calculate sizes */
etupAllocSize = BLCKSZ;
maxSize = HNSW_MAX_SIZE;
/* Allocate once */
etup = palloc0(etupAllocSize);
ntup = palloc0(BLCKSZ);
etup = palloc0(HNSW_TUPLE_ALLOC_SIZE);
ntup = palloc0(HNSW_TUPLE_ALLOC_SIZE);
/* Prepare first page */
buf = HnswNewBuffer(index, forkNum);
@@ -178,13 +176,13 @@ CreateGraphPages(HnswBuildState * buildstate)
Size etupSize;
Size ntupSize;
Size combinedSize;
void *valuePtr = HnswPtrAccess(base, element->value);
Pointer valuePtr = HnswPtrAccess(base, element->value);
/* Update iterator */
iter = element->next;
/* Zero memory for each element */
MemSet(etup, 0, etupAllocSize);
MemSet(etup, 0, HNSW_TUPLE_ALLOC_SIZE);
/* Calculate sizes */
etupSize = HNSW_ELEMENT_TUPLE_SIZE(VARSIZE_ANY(valuePtr));
@@ -192,7 +190,7 @@ CreateGraphPages(HnswBuildState * buildstate)
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
/* Initial size check */
if (etupSize > etupAllocSize)
if (etupSize > HNSW_TUPLE_ALLOC_SIZE)
elog(ERROR, "index tuple too large");
HnswSetElementTuple(base, etup, element);
@@ -254,38 +252,43 @@ WriteNeighborTuples(HnswBuildState * buildstate)
int m = buildstate->m;
HnswElementPtr iter = buildstate->graph->head;
char *base = buildstate->hnswarea;
HnswNeighborTuple ntup;
/* Allocate once */
ntup = palloc0(HNSW_TUPLE_ALLOC_SIZE);
while (!HnswPtrIsNull(base, iter))
{
HnswElement e = HnswPtrAccess(base, iter);
HnswElement element = HnswPtrAccess(base, iter);
Buffer buf;
Page page;
ItemId itemid;
HnswNeighborTuple ntup;
Size ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, m);
/* Update iterator */
iter = e->next;
iter = element->next;
/* Zero memory for each element */
MemSet(ntup, 0, HNSW_TUPLE_ALLOC_SIZE);
/* Can take a while, so ensure we can interrupt */
/* Needs to be called when no buffer locks are held */
CHECK_FOR_INTERRUPTS();
buf = ReadBufferExtended(index, forkNum, e->neighborPage, RBM_NORMAL, NULL);
buf = ReadBufferExtended(index, forkNum, element->neighborPage, RBM_NORMAL, NULL);
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
page = BufferGetPage(buf);
itemid = PageGetItemId(page, e->neighborOffno);
ntup = (HnswNeighborTuple) PageGetItem(page, itemid);
/* Check expected size */
Assert(ItemIdGetLength(itemid) == HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m));
HnswSetNeighborTuple(base, ntup, element, m);
/* Update page in-place */
HnswSetNeighborTuple(base, ntup, e, m);
if (!PageIndexTupleOverwrite(page, element->neighborOffno, (Item) ntup, ntupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */
MarkBufferDirty(buf);
UnlockReleaseBuffer(buf);
}
pfree(ntup);
}
/*
@@ -428,10 +431,15 @@ InsertTupleInMemory(HnswBuildState * buildstate, HnswElement element)
HnswGraph *graph = buildstate->graph;
HnswElement entryPoint;
LWLock *entryLock = &graph->entryLock;
LWLock *entryWaitLock = &graph->entryWaitLock;
int efConstruction = buildstate->efConstruction;
int m = buildstate->m;
char *base = buildstate->hnswarea;
/* Wait if another process needs exclusive lock */
if (LWLockAcquireOrWait(entryWaitLock, LW_EXCLUSIVE))
LWLockRelease(entryWaitLock);
/* Get entry point */
LWLockAcquire(entryLock, LW_SHARED);
entryPoint = HnswPtrAccess(base, graph->entryPoint);
@@ -443,7 +451,9 @@ InsertTupleInMemory(HnswBuildState * buildstate, HnswElement element)
LWLockRelease(entryLock);
/* Get exclusive lock */
LWLockAcquire(entryWaitLock, LW_EXCLUSIVE);
LWLockAcquire(entryLock, LW_EXCLUSIVE);
LWLockRelease(entryWaitLock);
/* Get latest entry point after lock is acquired */
entryPoint = HnswPtrAccess(base, graph->entryPoint);
@@ -598,6 +608,9 @@ BuildCallback(Relation index, CALLBACK_ITEM_POINTER, Datum *values,
static void
InitGraph(HnswGraph * graph, char *base, long memoryTotal)
{
/* Initialize the lock tranche if needed */
HnswInitLockTranche();
HnswPtrStore(base, graph->head, (HnswElement) NULL);
HnswPtrStore(base, graph->entryPoint, (HnswElement) NULL);
graph->memoryUsed = 0;
@@ -606,6 +619,7 @@ InitGraph(HnswGraph * graph, char *base, long memoryTotal)
graph->indtuples = 0;
SpinLockInit(&graph->lock);
LWLockInitialize(&graph->entryLock, hnsw_lock_tranche_id);
LWLockInitialize(&graph->entryWaitLock, hnsw_lock_tranche_id);
LWLockInitialize(&graph->allocatorLock, hnsw_lock_tranche_id);
LWLockInitialize(&graph->flushLock, hnsw_lock_tranche_id);
}
@@ -971,6 +985,14 @@ HnswBeginParallel(HnswBuildState * buildstate, bool isconcurrent, int request)
/* Report less than allocated so never fails */
InitGraph(&hnswshared->graphData, hnswarea, esthnswarea - 1024 * 1024);
/*
* Avoid base address for relptr for Postgres < 14.5
* https://github.com/postgres/postgres/commit/7201cd18627afc64850537806da7f22150d1a83b
*/
#if PG_VERSION_NUM < 140005
hnswshared->graphData.memoryUsed += MAXALIGN(1);
#endif
shm_toc_insert(pcxt->toc, PARALLEL_KEY_HNSW_SHARED, hnswshared);
shm_toc_insert(pcxt->toc, PARALLEL_KEY_HNSW_AREA, hnswarea);

View File

@@ -355,9 +355,7 @@ HnswUpdateNeighborsOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, Hns
Buffer buf;
Page page;
GenericXLogState *state;
ItemId itemid;
HnswNeighborTuple ntup;
Size ntupSize;
int idx = -1;
int startIdx;
HnswElement neighborElement = HnswPtrAccess(base, hc->element);
@@ -396,9 +394,7 @@ HnswUpdateNeighborsOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, Hns
}
/* Get tuple */
itemid = PageGetItemId(page, offno);
ntup = (HnswNeighborTuple) PageGetItem(page, itemid);
ntupSize = ItemIdGetLength(itemid);
ntup = (HnswNeighborTuple) PageGetItem(page, PageGetItemId(page, offno));
/* Calculate index for update */
startIdx = (neighborElement->level - lc) * m;
@@ -427,13 +423,9 @@ HnswUpdateNeighborsOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, Hns
{
ItemPointer indextid = &ntup->indextids[idx];
/* Update neighbor */
/* Update neighbor on the buffer */
ItemPointerSet(indextid, e->blkno, e->offno);
/* Overwrite tuple */
if (!PageIndexTupleOverwrite(page, offno, (Item) ntup, ntupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */
if (building)
MarkBufferDirty(buf);
@@ -457,9 +449,7 @@ AddDuplicateOnDisk(Relation index, HnswElement element, HnswElement dup, bool bu
Buffer buf;
Page page;
GenericXLogState *state;
ItemId itemid;
HnswElementTuple etup;
Size etupSize;
int i;
/* Read page */
@@ -477,9 +467,7 @@ AddDuplicateOnDisk(Relation index, HnswElement element, HnswElement dup, bool bu
}
/* Find space */
itemid = PageGetItemId(page, dup->offno);
etup = (HnswElementTuple) PageGetItem(page, itemid);
etupSize = ItemIdGetLength(itemid);
etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, dup->offno));
for (i = 0; i < HNSW_HEAPTIDS; i++)
{
if (!ItemPointerIsValid(&etup->heaptids[i]))
@@ -495,13 +483,9 @@ AddDuplicateOnDisk(Relation index, HnswElement element, HnswElement dup, bool bu
return false;
}
/* Add heap TID */
/* Add heap TID, modifying the tuple on the page directly */
etup->heaptids[i] = element->heaptids[0];
/* Overwrite tuple */
if (!PageIndexTupleOverwrite(page, dup->offno, (Item) etup, etupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */
if (building)
MarkBufferDirty(buf);

View File

@@ -860,12 +860,15 @@ HnswSearchLayer(char *base, Datum q, List *ep, int ef, int lc, Relation index, F
static int
#if PG_VERSION_NUM >= 130000
CompareCandidateDistances(const ListCell *a, const ListCell *b)
{
HnswCandidate *hca = lfirst(a);
HnswCandidate *hcb = lfirst(b);
#else
CompareCandidateDistances(const void *a, const void *b)
#endif
{
HnswCandidate *hca = lfirst((ListCell *) a);
HnswCandidate *hcb = lfirst((ListCell *) b);
HnswCandidate *hca = lfirst(*(ListCell **) a);
HnswCandidate *hcb = lfirst(*(ListCell **) b);
#endif
if (hca->distance < hcb->distance)
return 1;
@@ -888,12 +891,15 @@ CompareCandidateDistances(const void *a, const void *b)
static int
#if PG_VERSION_NUM >= 130000
CompareCandidateDistancesOffset(const ListCell *a, const ListCell *b)
{
HnswCandidate *hca = lfirst(a);
HnswCandidate *hcb = lfirst(b);
#else
CompareCandidateDistancesOffset(const void *a, const void *b)
#endif
{
HnswCandidate *hca = lfirst((ListCell *) a);
HnswCandidate *hcb = lfirst((ListCell *) b);
HnswCandidate *hca = lfirst(*(ListCell **) a);
HnswCandidate *hcb = lfirst(*(ListCell **) b);
#endif
if (hca->distance < hcb->distance)
return 1;
@@ -952,7 +958,9 @@ SelectNeighbors(char *base, List *c, int lm, int lc, FmgrInfo *procinfo, Oid col
{
List *r = NIL;
List *w = list_copy(c);
pairingheap *wd;
HnswCandidate **wd;
int wdlen = 0;
int wdoff = 0;
HnswNeighborArray *neighbors = HnswGetNeighbors(base, e2, lc);
bool mustCalculate = !neighbors->closerSet;
List *added = NIL;
@@ -961,7 +969,7 @@ SelectNeighbors(char *base, List *c, int lm, int lc, FmgrInfo *procinfo, Oid col
if (list_length(w) <= lm)
return w;
wd = pairingheap_allocate(CompareNearestCandidates, NULL);
wd = palloc(sizeof(HnswCandidate *) * list_length(w));
/* Ensure order of candidates is deterministic for closer caching */
if (sortCandidates)
@@ -1027,21 +1035,21 @@ SelectNeighbors(char *base, List *c, int lm, int lc, FmgrInfo *procinfo, Oid col
if (e->closer)
r = lappend(r, e);
else
pairingheap_add(wd, &(CreatePairingHeapNode(e)->ph_node));
wd[wdlen++] = e;
}
/* Cached value can only be used in future if sorted deterministically */
neighbors->closerSet = sortCandidates;
/* Keep pruned connections */
while (!pairingheap_is_empty(wd) && list_length(r) < lm)
r = lappend(r, ((HnswPairingHeapNode *) pairingheap_remove_first(wd))->inner);
while (wdoff < wdlen && list_length(r) < lm)
r = lappend(r, wd[wdoff++]);
/* Return pruned for update connections */
if (pruned != NULL)
{
if (!pairingheap_is_empty(wd))
*pruned = ((HnswPairingHeapNode *) pairingheap_first(wd))->inner;
if (wdoff < wdlen)
*pruned = wd[wdoff];
else
*pruned = linitial(w);
}

View File

@@ -60,8 +60,7 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
/* Iterate over nodes */
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
{
ItemId itemid = PageGetItemId(page, offno);
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, itemid);
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, offno));
int idx = 0;
bool itemUpdated = false;
@@ -92,15 +91,10 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
if (itemUpdated)
{
Size etupSize = ItemIdGetLength(itemid);
/* Mark rest as invalid */
for (int i = idx; i < HNSW_HEAPTIDS; i++)
ItemPointerSetInvalid(&etup->heaptids[i]);
if (!PageIndexTupleOverwrite(page, offno, (Item) etup, etupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
updated = true;
}
}
@@ -198,8 +192,8 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
FmgrInfo *procinfo = vacuumstate->procinfo;
Oid collation = vacuumstate->collation;
BufferAccessStrategy bas = vacuumstate->bas;
ItemId itemid;
HnswNeighborTuple ntup;
HnswNeighborTuple ntup = vacuumstate->ntup;
Size ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, m);
char *base = NULL;
/* Skip if element is entry point */
@@ -213,23 +207,23 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
/* Find neighbors for element, skipping itself */
HnswFindElementNeighbors(base, element, entryPoint, index, procinfo, collation, m, efConstruction, true);
/* Zero memory for each element */
MemSet(ntup, 0, HNSW_TUPLE_ALLOC_SIZE);
/* Update neighbor tuple */
/* Do this before getting page to minimize locking */
HnswSetNeighborTuple(base, ntup, element, m);
/* Get neighbor page */
buf = ReadBufferExtended(index, MAIN_FORKNUM, element->neighborPage, RBM_NORMAL, bas);
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
state = GenericXLogStart(index);
page = GenericXLogRegisterBuffer(state, buf, 0);
/* Get neighbor tuple */
itemid = PageGetItemId(page, element->neighborOffno);
ntup = (HnswNeighborTuple) PageGetItem(page, itemid);
/* Check expected size */
if (ItemIdGetLength(itemid) != HNSW_NEIGHBOR_TUPLE_SIZE(element->level, m))
/* Overwrite tuple */
if (!PageIndexTupleOverwrite(page, element->neighborOffno, (Item) ntup, ntupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Update page in-place */
HnswSetNeighborTuple(base, ntup, element, m);
/* Commit */
GenericXLogFinish(state);
UnlockReleaseBuffer(buf);
@@ -482,11 +476,8 @@ MarkDeleted(HnswVacuumState * vacuumstate)
/* Update element and neighbors together */
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
{
ItemId itemid = PageGetItemId(page, offno);
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, itemid);
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, offno));
HnswNeighborTuple ntup;
Size etupSize;
Size ntupSize;
Buffer nbuf;
Page npage;
BlockNumber neighborPage;
@@ -510,10 +501,6 @@ MarkDeleted(HnswVacuumState * vacuumstate)
if (ItemPointerIsValid(&etup->heaptids[0]))
continue;
/* Calculate sizes */
etupSize = ItemIdGetLength(itemid);
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(etup->level, vacuumstate->m);
/* Get neighbor page */
neighborPage = ItemPointerGetBlockNumber(&etup->neighbortid);
neighborOffno = ItemPointerGetOffsetNumber(&etup->neighbortid);
@@ -540,13 +527,10 @@ MarkDeleted(HnswVacuumState * vacuumstate)
for (int i = 0; i < ntup->count; i++)
ItemPointerSetInvalid(&ntup->indextids[i]);
/* Overwrite element tuple */
if (!PageIndexTupleOverwrite(page, offno, (Item) etup, etupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Overwrite neighbor tuple */
if (!PageIndexTupleOverwrite(npage, neighborOffno, (Item) ntup, ntupSize))
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/*
* We modified the tuples in place, no need to call
* PageIndexTupleOverwrite
*/
/* Commit */
GenericXLogFinish(state);
@@ -591,6 +575,7 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
vacuumstate->bas = GetAccessStrategy(BAS_BULKREAD);
vacuumstate->procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
vacuumstate->collation = index->rd_indcollation[0];
vacuumstate->ntup = palloc0(HNSW_TUPLE_ALLOC_SIZE);
vacuumstate->tmpCtx = AllocSetContextCreate(CurrentMemoryContext,
"Hnsw vacuum temporary context",
ALLOCSET_DEFAULT_SIZES);
@@ -610,6 +595,7 @@ FreeVacuumState(HnswVacuumState * vacuumstate)
{
tidhash_destroy(vacuumstate->deleted);
FreeAccessStrategy(vacuumstate->bas);
pfree(vacuumstate->ntup);
MemoryContextDelete(vacuumstate->tmpCtx);
}

View File

@@ -866,9 +866,10 @@ vector_mul(PG_FUNCTION_ARGS)
int
vector_cmp_internal(Vector * a, Vector * b)
{
CheckDims(a, b);
int dim = Min(a->dim, b->dim);
for (int i = 0; i < a->dim; i++)
/* Check values before dimensions to be consistent with Postgres arrays */
for (int i = 0; i < dim; i++)
{
if (a->x[i] < b->x[i])
return -1;
@@ -876,6 +877,13 @@ vector_cmp_internal(Vector * a, Vector * b)
if (a->x[i] > b->x[i])
return 1;
}
if (a->dim < b->dim)
return -1;
if (a->dim > b->dim)
return 1;
return 0;
}
@@ -889,6 +897,9 @@ vector_lt(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) < 0);
}
@@ -902,6 +913,9 @@ vector_le(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) <= 0);
}
@@ -915,6 +929,9 @@ vector_eq(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) == 0);
}
@@ -928,6 +945,9 @@ vector_ne(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) != 0);
}
@@ -941,6 +961,9 @@ vector_ge(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) >= 0);
}
@@ -954,6 +977,9 @@ vector_gt(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) > 0);
}

View File

@@ -24,6 +24,56 @@ SELECT '[1e37]'::vector * '[1e37]';
ERROR: value out of range: overflow
SELECT '[1e-37]'::vector * '[1e-37]';
ERROR: value out of range: underflow
SELECT '[1,2,3]'::vector = '[1,2,3]';
?column?
----------
t
(1 row)
SELECT '[1,2,3]'::vector = '[1,2]';
ERROR: different vector dimensions 3 and 2
SELECT vector_cmp('[1,2,3]', '[1,2,3]');
vector_cmp
------------
0
(1 row)
SELECT vector_cmp('[1,2,3]', '[0,0,0]');
vector_cmp
------------
1
(1 row)
SELECT vector_cmp('[0,0,0]', '[1,2,3]');
vector_cmp
------------
-1
(1 row)
SELECT vector_cmp('[1,2]', '[1,2,3]');
vector_cmp
------------
-1
(1 row)
SELECT vector_cmp('[1,2,3]', '[1,2]');
vector_cmp
------------
1
(1 row)
SELECT vector_cmp('[1,2]', '[2,3,4]');
vector_cmp
------------
-1
(1 row)
SELECT vector_cmp('[2,3]', '[1,2,3]');
vector_cmp
------------
1
(1 row)
SELECT vector_dims('[1,2,3]');
vector_dims
-------------

View File

@@ -6,6 +6,17 @@ SELECT '[1,2,3]'::vector * '[4,5,6]';
SELECT '[1e37]'::vector * '[1e37]';
SELECT '[1e-37]'::vector * '[1e-37]';
SELECT '[1,2,3]'::vector = '[1,2,3]';
SELECT '[1,2,3]'::vector = '[1,2]';
SELECT vector_cmp('[1,2,3]', '[1,2,3]');
SELECT vector_cmp('[1,2,3]', '[0,0,0]');
SELECT vector_cmp('[0,0,0]', '[1,2,3]');
SELECT vector_cmp('[1,2]', '[1,2,3]');
SELECT vector_cmp('[1,2,3]', '[1,2]');
SELECT vector_cmp('[1,2]', '[2,3,4]');
SELECT vector_cmp('[2,3]', '[1,2,3]');
SELECT vector_dims('[1,2,3]');
SELECT round(vector_norm('[1,1]')::numeric, 5);

View File

@@ -1,4 +1,4 @@
comment = 'vector data type and ivfflat and hnsw access methods'
default_version = '0.5.1'
default_version = '0.6.1'
module_pathname = '$libdir/vector'
relocatable = true