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mirror of https://github.com/microsoft/qlib.git synced 2026-06-06 05:51:17 +08:00

bug fix & use oracle transport pretrain

This commit is contained in:
Dong Zhou
2021-08-30 07:32:04 +00:00
parent 0483406c12
commit 8f4d320832
4 changed files with 375 additions and 248 deletions

View File

@@ -6,30 +6,30 @@ market: &market csi300
benchmark: &benchmark SH000300
data_handler_config: &data_handler_config
start_time: 2008-01-01
end_time: 2020-08-01
fit_start_time: 2008-01-01
fit_end_time: 2014-12-31
instruments: *market
infer_processors:
- class: FilterCol
kwargs:
fields_group: feature
col_list: ["RESI5", "WVMA5", "RSQR5", "KLEN", "RSQR10", "CORR5", "CORD5", "CORR10",
"ROC60", "RESI10", "VSTD5", "RSQR60", "CORR60", "WVMA60", "STD5",
"RSQR20", "CORD60", "CORD10", "CORR20", "KLOW"]
- class: RobustZScoreNorm
kwargs:
fields_group: feature
clip_outlier: true
- class: Fillna
kwargs:
fields_group: feature
learn_processors:
- class: CSRankNorm
kwargs:
fields_group: label
label: ["Ref($close, -2) / Ref($close, -1) - 1"]
start_time: 2008-01-01
end_time: 2020-08-01
fit_start_time: 2008-01-01
fit_end_time: 2014-12-31
instruments: *market
infer_processors:
- class: FilterCol
kwargs:
fields_group: feature
col_list: ["RESI5", "WVMA5", "RSQR5", "KLEN", "RSQR10", "CORR5", "CORD5", "CORR10",
"ROC60", "RESI10", "VSTD5", "RSQR60", "CORR60", "WVMA60", "STD5",
"RSQR20", "CORD60", "CORD10", "CORR20", "KLOW"]
- class: RobustZScoreNorm
kwargs:
fields_group: feature
clip_outlier: true
- class: Fillna
kwargs:
fields_group: feature
learn_processors:
- class: CSRankNorm
kwargs:
fields_group: label
label: ["Ref($close, -2) / Ref($close, -1) - 1"]
num_states: &num_states 3
@@ -37,7 +37,10 @@ memory_mode: &memory_mode sample
tra_config: &tra_config
num_states: *num_states
hidden_size: 16
rnn_arch: LSTM
hidden_size: 32
num_layers: 1
dropout: 0.0
tau: 1.0
src_info: LR_TPE
@@ -50,21 +53,21 @@ model_config: &model_config
dropout: 0.0
port_analysis_config: &port_analysis_config
strategy:
class: TopkDropoutStrategy
module_path: qlib.contrib.strategy.strategy
kwargs:
topk: 50
n_drop: 5
backtest:
verbose: False
limit_threshold: 0.095
account: 100000000
benchmark: *benchmark
deal_price: close
open_cost: 0.0005
close_cost: 0.0015
min_cost: 5
strategy:
class: TopkDropoutStrategy
module_path: qlib.contrib.strategy.strategy
kwargs:
topk: 50
n_drop: 5
backtest:
verbose: False
limit_threshold: 0.095
account: 100000000
benchmark: *benchmark
deal_price: close
open_cost: 0.0005
close_cost: 0.0015
min_cost: 5
task:
model:
@@ -76,13 +79,13 @@ task:
model_type: RNN
lr: 1e-3
n_epochs: 100
max_steps_per_epoch: 100
early_stop: 10
smooth_steps: 5
max_steps_per_epoch:
early_stop: 20
logdir: output/Alpha158
seed: 0
logdir:
lamb: 1.0
rho: 1.0
rho: 0.99
alpha: 0.5
transport_method: router
memory_mode: *memory_mode
eval_train: False

View File

@@ -6,24 +6,24 @@ market: &market csi300
benchmark: &benchmark SH000300
data_handler_config: &data_handler_config
start_time: 2008-01-01
end_time: 2020-08-01
fit_start_time: 2008-01-01
fit_end_time: 2014-12-31
instruments: *market
infer_processors:
- class: RobustZScoreNorm
kwargs:
fields_group: feature
clip_outlier: true
- class: Fillna
kwargs:
fields_group: feature
learn_processors:
- class: CSRankNorm
kwargs:
fields_group: label
label: ["Ref($close, -2) / Ref($close, -1) - 1"]
start_time: 2008-01-01
end_time: 2020-08-01
fit_start_time: 2008-01-01
fit_end_time: 2014-12-31
instruments: *market
infer_processors:
- class: RobustZScoreNorm
kwargs:
fields_group: feature
clip_outlier: true
- class: Fillna
kwargs:
fields_group: feature
learn_processors:
- class: CSRankNorm
kwargs:
fields_group: label
label: ["Ref($close, -2) / Ref($close, -1) - 1"]
num_states: &num_states 3
@@ -31,7 +31,10 @@ memory_mode: &memory_mode sample
tra_config: &tra_config
num_states: *num_states
hidden_size: 16
rnn_arch: LSTM
hidden_size: 32
num_layers: 1
dropout: 0.0
tau: 1.0
src_info: LR_TPE
@@ -44,21 +47,21 @@ model_config: &model_config
dropout: 0.2
port_analysis_config: &port_analysis_config
strategy:
class: TopkDropoutStrategy
module_path: qlib.contrib.strategy.strategy
kwargs:
topk: 50
n_drop: 5
backtest:
verbose: False
limit_threshold: 0.095
account: 100000000
benchmark: *benchmark
deal_price: close
open_cost: 0.0005
close_cost: 0.0015
min_cost: 5
strategy:
class: TopkDropoutStrategy
module_path: qlib.contrib.strategy.strategy
kwargs:
topk: 50
n_drop: 5
backtest:
verbose: False
limit_threshold: 0.095
account: 100000000
benchmark: *benchmark
deal_price: close
open_cost: 0.0005
close_cost: 0.0015
min_cost: 5
task:
model:
@@ -70,13 +73,13 @@ task:
model_type: RNN
lr: 1e-3
n_epochs: 100
max_steps_per_epoch: 100
early_stop: 10
smooth_steps: 5
max_steps_per_epoch:
early_stop: 20
logdir: output/Alpha158_full
seed: 0
logdir:
lamb: 1.0
rho: 1.0
rho: 0.99
alpha: 0.5
transport_method: router
memory_mode: *memory_mode
eval_train: False

View File

@@ -6,24 +6,24 @@ market: &market csi300
benchmark: &benchmark SH000300
data_handler_config: &data_handler_config
start_time: 2008-01-01
end_time: 2020-08-01
fit_start_time: 2008-01-01
fit_end_time: 2014-12-31
instruments: *market
infer_processors:
- class: RobustZScoreNorm
kwargs:
fields_group: feature
clip_outlier: true
- class: Fillna
kwargs:
fields_group: feature
learn_processors:
- class: CSRankNorm
kwargs:
fields_group: label
label: ["Ref($close, -2) / Ref($close, -1) - 1"]
start_time: 2008-01-01
end_time: 2020-08-01
fit_start_time: 2008-01-01
fit_end_time: 2014-12-31
instruments: *market
infer_processors:
- class: RobustZScoreNorm
kwargs:
fields_group: feature
clip_outlier: true
- class: Fillna
kwargs:
fields_group: feature
learn_processors:
- class: CSRankNorm
kwargs:
fields_group: label
label: ["Ref($close, -2) / Ref($close, -1) - 1"]
num_states: &num_states 3
@@ -31,7 +31,10 @@ memory_mode: &memory_mode sample
tra_config: &tra_config
num_states: *num_states
hidden_size: 16
rnn_arch: LSTM
hidden_size: 32
num_layers: 1
dropout: 0.0
tau: 1.0
src_info: LR_TPE
@@ -44,21 +47,21 @@ model_config: &model_config
dropout: 0.0
port_analysis_config: &port_analysis_config
strategy:
class: TopkDropoutStrategy
module_path: qlib.contrib.strategy.strategy
kwargs:
topk: 50
n_drop: 5
backtest:
verbose: False
limit_threshold: 0.095
account: 100000000
benchmark: *benchmark
deal_price: close
open_cost: 0.0005
close_cost: 0.0015
min_cost: 5
strategy:
class: TopkDropoutStrategy
module_path: qlib.contrib.strategy.strategy
kwargs:
topk: 50
n_drop: 5
backtest:
verbose: False
limit_threshold: 0.095
account: 100000000
benchmark: *benchmark
deal_price: close
open_cost: 0.0005
close_cost: 0.0015
min_cost: 5
task:
model:
@@ -70,13 +73,13 @@ task:
model_type: RNN
lr: 1e-3
n_epochs: 100
max_steps_per_epoch: 100
early_stop: 10
smooth_steps: 5
logdir:
max_steps_per_epoch:
early_stop: 20
logdir: output/Alpha360
seed: 0
lamb: 1.0
rho: 1.0
rho: 0.99
alpha: 0.5
transport_method: router
memory_mode: *memory_mode
eval_train: False

View File

@@ -1,6 +1,7 @@
# Copyright (c) Microsoft Corporation.
# Licensed under the MIT License.
import io
import os
import copy
import math
@@ -8,6 +9,8 @@ import json
import collections
import numpy as np
import pandas as pd
import seaborn as sns
import matplotlib.pyplot as plt
import torch
import torch.nn as nn
@@ -40,10 +43,11 @@ class TRAModel(Model):
lr (float): learning rate
n_epochs (int): number of total epochs
early_stop (int): early stop when performance not improved at this step
smooth_steps (int): number of steps for parameter smoothing
update_freq (int): gradient update frequency
max_steps_per_epoch (int): maximum number of steps in one epoch
lamb (float): regularization parameter
rho (float): exponential decay rate for `lamb`
alpha (float): fusion parameter for calculating transport loss matrix
seed (int): random seed
logdir (str): local log directory
eval_train (bool): whether evaluate train set between epochs
@@ -65,16 +69,18 @@ class TRAModel(Model):
lr=1e-3,
n_epochs=500,
early_stop=50,
smooth_steps=5,
update_freq=1,
max_steps_per_epoch=None,
lamb=0.0,
rho=0.99,
alpha=1.0,
seed=0,
logdir=None,
eval_train=False,
eval_test=False,
pretrain=False,
init_state=None,
reset_router=False,
freeze_model=False,
freeze_predictors=False,
transport_method="none",
@@ -102,16 +108,18 @@ class TRAModel(Model):
self.lr = lr
self.n_epochs = n_epochs
self.early_stop = early_stop
self.smooth_steps = smooth_steps
self.update_freq = update_freq
self.max_steps_per_epoch = max_steps_per_epoch
self.lamb = lamb
self.rho = rho
self.alpha = alpha
self.seed = seed
self.logdir = logdir
self.eval_train = eval_train
self.eval_test = eval_test
self.pretrain = pretrain
self.init_state = init_state
self.reset_router = reset_router
self.freeze_model = freeze_model
self.freeze_predictors = freeze_predictors
self.transport_method = transport_method
@@ -139,20 +147,24 @@ class TRAModel(Model):
print(self.tra)
if self.init_state:
self.logger.warninging(f"load state dict from `init_state`")
self.logger.warning(f"load state dict from `init_state`")
state_dict = torch.load(self.init_state, map_location="cpu")
self.model.load_state_dict(state_dict["model"])
try:
self.tra.load_state_dict(state_dict["tra"])
except:
self.logger.warninging("cannot load tra model, will skip")
res = load_state_dict_unsafe(self.tra, state_dict["tra"])
self.logger.warning(str(res))
if self.reset_router:
self.logger.warning(f"reset TRA.router parameters")
self.tra.fc.reset_parameters()
self.tra.router.reset_parameters()
if self.freeze_model:
self.logger.warninging(f"freeze model parameters")
self.logger.warning(f"freeze model parameters")
for param in self.model.parameters():
param.requires_grad_(False)
if self.freeze_predictors:
self.logger.warninging(f"freeze TRA.predictors parameters")
self.logger.warning(f"freeze TRA.predictors parameters")
for param in self.tra.predictors.parameters():
param.requires_grad_(False)
@@ -169,7 +181,11 @@ class TRAModel(Model):
self.model.train()
self.tra.train()
data_set.train()
self.optimizer.zero_grad()
P_all = []
prob_all = []
choice_all = []
max_steps = len(data_set)
if self.max_steps_per_epoch is not None:
if epoch == 0 and self.max_steps_per_epoch < max_steps:
@@ -184,49 +200,76 @@ class TRAModel(Model):
if cur_step > max_steps:
break
self.global_step += 1
if not is_pretrain:
self.global_step += 1
data, state, label, count = batch["data"], batch["state"], batch["label"], batch["daily_count"]
index = batch["daily_index"] if self.use_daily_transport else batch["index"]
hidden = self.model(data)
with torch.set_grad_enabled(not self.freeze_model):
hidden = self.model(data)
all_preds, choice, prob = self.tra(hidden, state)
if not is_pretrain and self.transport_method != "none":
if is_pretrain or self.transport_method != "none":
# NOTE: use oracle transport for pre-training
loss, pred, L, P = self.transport_fn(
all_preds, label, choice, prob, count, self.transport_method, training=True
all_preds,
label,
choice,
prob,
state.mean(dim=1),
count,
self.transport_method if not is_pretrain else "oracle",
self.alpha,
training=True,
)
data_set.assign_data(index, L) # save loss to memory
lamb = self.lamb * (self.rho ** self.global_step) # regularization decay
if self.use_daily_transport: # only save for daily transport
P_all.append(pd.DataFrame(P.detach().cpu().numpy(), index=index))
prob_all.append(pd.DataFrame(prob.detach().cpu().numpy(), index=index))
choice_all.append(pd.DataFrame(choice.detach().cpu().numpy(), index=index))
decay = self.rho ** (self.global_step // 100) # decay every 100 steps
lamb = 0 if is_pretrain else self.lamb * decay
reg = prob.log().mul(P).sum(dim=1).mean() # train router to predict OT assignment
if self._writer is not None:
if self._writer is not None and not is_pretrain:
self._writer.add_scalar("training/router_loss", -reg.item(), self.global_step)
self._writer.add_scalar("training/reg_loss", loss.item(), self.global_step)
self._writer.add_scalar("training/lamb", lamb, self.global_step)
prob_mean = prob.mean(axis=0).detach()
self._writer.add_scalar("training/prob_max", prob_mean.max(), self.global_step)
self._writer.add_scalar("training/prob_min", prob_mean.min(), self.global_step)
P_mean = P.mean(axis=0).detach()
self._writer.add_scalar("training/P_max", P_mean.max(), self.global_step)
self._writer.add_scalar("training/P_min", P_mean.min(), self.global_step)
if not self.use_daily_transport:
P_mean = P.mean(axis=0).detach()
self._writer.add_scalar("training/P", P_mean.max() / P_mean.min(), self.global_step)
loss = loss - lamb * reg
else:
pred = all_preds.mean(dim=1)
loss = loss_fn(pred, label)
loss.backward()
self.optimizer.step()
self.optimizer.zero_grad()
(loss / self.update_freq).backward()
if cur_step % self.update_freq == 0:
self.optimizer.step()
self.optimizer.zero_grad()
if self._writer is not None:
if self._writer is not None and not is_pretrain:
self._writer.add_scalar("training/total_loss", loss.item(), self.global_step)
total_loss += loss.item()
total_count += 1
if self.use_daily_transport and len(P_all):
P_all = pd.concat(P_all, axis=0)
prob_all = pd.concat(prob_all, axis=0)
choice_all = pd.concat(choice_all, axis=0)
P_all.index = data_set.restore_daily_index(P_all.index)
prob_all.index = P_all.index
choice_all.index = P_all.index
if not is_pretrain:
self._writer.add_image("P", plot(P_all), epoch, dataformats="HWC")
self._writer.add_image("prob", plot(prob_all), epoch, dataformats="HWC")
self._writer.add_image("choice", plot(choice_all), epoch, dataformats="HWC")
total_loss /= total_count
if self._writer is not None:
if self._writer is not None and not is_pretrain:
self._writer.add_scalar("training/loss", total_loss, epoch)
return total_loss
@@ -239,6 +282,7 @@ class TRAModel(Model):
preds = []
probs = []
P_all = []
metrics = []
for batch in tqdm(data_set):
data, state, label, count = batch["data"], batch["state"], batch["label"], batch["daily_count"]
@@ -248,11 +292,21 @@ class TRAModel(Model):
hidden = self.model(data)
all_preds, choice, prob = self.tra(hidden, state)
if not is_pretrain and self.transport_method != "none":
if is_pretrain or self.transport_method != "none":
loss, pred, L, P = self.transport_fn(
all_preds, label, choice, prob, count, self.transport_method, training=False
all_preds,
label,
choice,
prob,
state.mean(dim=1),
count,
self.transport_method if not is_pretrain else "oracle",
self.alpha,
training=False,
)
data_set.assign_data(index, L) # save loss to memory
if P is not None and return_pred:
P_all.append(pd.DataFrame(P.cpu().numpy(), index=index))
else:
pred = all_preds.mean(dim=1)
@@ -276,7 +330,7 @@ class TRAModel(Model):
"ICIR": metrics.IC.mean() / metrics.IC.std(),
}
if self._writer is not None and epoch >= 0:
if self._writer is not None and epoch >= 0 and not is_pretrain:
for key, value in metrics.items():
self._writer.add_scalar(prefix + "/" + key, value, epoch)
@@ -285,6 +339,7 @@ class TRAModel(Model):
preds.index = data_set.restore_index(preds.index)
preds.index = preds.index.swaplevel()
preds.sort_index(inplace=True)
if probs:
probs = pd.concat(probs, axis=0)
if self.use_daily_transport:
@@ -294,9 +349,18 @@ class TRAModel(Model):
probs.index = probs.index.swaplevel()
probs.sort_index(inplace=True)
return metrics, preds, probs
if len(P_all):
P_all = pd.concat(P_all, axis=0)
if self.use_daily_transport:
P_all.index = data_set.restore_daily_index(P_all.index)
else:
P_all.index = data_set.restore_index(P_all.index)
P_all.index = P_all.index.swaplevel()
P_all.sort_index(inplace=True)
def _fit(self, train_set, valid_set, test_set, evals_result, start_epoch=0, is_pretrain=True):
return metrics, preds, probs, P_all
def _fit(self, train_set, valid_set, test_set, evals_result, is_pretrain=True):
best_score = -1
best_epoch = 0
@@ -305,29 +369,18 @@ class TRAModel(Model):
"model": copy.deepcopy(self.model.state_dict()),
"tra": copy.deepcopy(self.tra.state_dict()),
}
params_list = {
"model": collections.deque(maxlen=self.smooth_steps),
"tra": collections.deque(maxlen=self.smooth_steps),
}
# train
if not is_pretrain and self.transport_method == "router":
if not is_pretrain and self.transport_method != "none":
self.logger.info("init memory...")
self.test_epoch(-1, train_set)
for epoch in range(start_epoch, start_epoch + self.n_epochs):
for epoch in range(self.n_epochs):
self.logger.info("Epoch %d:", epoch)
self.logger.info("training...")
self.train_epoch(epoch, train_set, is_pretrain=is_pretrain)
self.logger.info("evaluating...")
# average params for inference
params_list["model"].append(copy.deepcopy(self.model.state_dict()))
params_list["tra"].append(copy.deepcopy(self.tra.state_dict()))
self.model.load_state_dict(average_params(params_list["model"]))
self.tra.load_state_dict(average_params(params_list["tra"]))
# NOTE: during evaluating, the whole memory will be refreshed
if not is_pretrain and (self.transport_method == "router" or self.eval_train):
train_set.clear_memory() # NOTE: clear the shared memory
@@ -360,15 +413,11 @@ class TRAModel(Model):
self.logger.info("early stop @ %s" % epoch)
break
# restore parameters
self.model.load_state_dict(params_list["model"][-1])
self.tra.load_state_dict(params_list["tra"][-1])
self.logger.info("best score: %.6lf @ %d" % (best_score, best_epoch))
self.model.load_state_dict(best_params["model"])
self.tra.load_state_dict(best_params["tra"])
return best_score, epoch
return best_score
def fit(self, dataset, evals_result=dict()):
@@ -383,29 +432,27 @@ class TRAModel(Model):
evals_result["valid"] = []
evals_result["test"] = []
epoch = 0
if self.pretrain:
self.logger.info("pretraining...")
self.optimizer = optim.Adam(list(self.model.parameters()) + list(self.tra.parameters()), lr=self.lr)
_, epoch = self._fit(train_set, valid_set, test_set, evals_result, is_pretrain=True)
self.logger.info("reset TRA")
self.tra.reset_parameters() # reset both router and predictors
self.optimizer = optim.Adam(
list(self.model.parameters()) + list(self.tra.predictors.parameters()), lr=self.lr
)
self._fit(train_set, valid_set, test_set, evals_result, is_pretrain=True)
# reset optimizer
self.optimizer = optim.Adam(list(self.model.parameters()) + list(self.tra.parameters()), lr=self.lr)
self.logger.info("training...")
best_score, _ = self._fit(train_set, valid_set, test_set, evals_result, start_epoch=epoch, is_pretrain=False)
best_score = self._fit(train_set, valid_set, test_set, evals_result, is_pretrain=False)
self.logger.info("inference")
train_metrics, train_preds, train_probs = self.test_epoch(-1, train_set, return_pred=True)
train_metrics, train_preds, train_probs, train_P = self.test_epoch(-1, train_set, return_pred=True)
self.logger.info("train metrics: %s" % train_metrics)
valid_metrics, valid_preds, valid_probs = self.test_epoch(-1, valid_set, return_pred=True)
valid_metrics, valid_preds, valid_probs, valid_P = self.test_epoch(-1, valid_set, return_pred=True)
self.logger.info("valid metrics: %s" % valid_metrics)
test_metrics, test_preds, test_probs = self.test_epoch(-1, test_set, return_pred=True)
test_metrics, test_preds, test_probs, test_P = self.test_epoch(-1, test_set, return_pred=True)
self.logger.info("test metrics: %s" % test_metrics)
if self.logdir:
@@ -426,6 +473,11 @@ class TRAModel(Model):
valid_probs.to_pickle(self.logdir + "/valid_prob.pkl")
test_probs.to_pickle(self.logdir + "/test_prob.pkl")
if len(train_P):
train_P.to_pickle(self.logdir + "/train_P.pkl")
valid_P.to_pickle(self.logdir + "/valid_P.pkl")
test_P.to_pickle(self.logdir + "/test_P.pkl")
info = {
"config": {
"model_config": self.model_config,
@@ -434,10 +486,10 @@ class TRAModel(Model):
"lr": self.lr,
"n_epochs": self.n_epochs,
"early_stop": self.early_stop,
"smooth_steps": self.smooth_steps,
"max_steps_per_epoch": self.max_steps_per_epoch,
"lamb": self.lamb,
"rho": self.rho,
"alpha": self.alpha,
"seed": self.seed,
"logdir": self.logdir,
"pretrain": self.pretrain,
@@ -460,7 +512,7 @@ class TRAModel(Model):
test_set = dataset.prepare(segment)
metrics, preds, probs = self.test_epoch(-1, test_set, return_pred=True)
metrics, preds, _, _ = self.test_epoch(-1, test_set, return_pred=True)
self.logger.info("test metrics: %s" % metrics)
return preds
@@ -476,7 +528,7 @@ class RNN(nn.Module):
num_layers (int): number of hidden layers
rnn_arch (str): rnn architecture
use_attn (bool): whether use attention layer.
we use concat attention as https://github.com/fulifeng/Adv-AGRU/
we use concat attention as https://github.com/fulifeng/Adv-ALSTM/
dropout (float): dropout rate
"""
@@ -498,10 +550,14 @@ class RNN(nn.Module):
self.rnn_arch = rnn_arch
self.use_attn = use_attn
self.input_proj = nn.Linear(input_size, hidden_size)
if hidden_size < input_size:
# compression
self.input_proj = nn.Linear(input_size, hidden_size)
else:
self.input_proj = None
self.rnn = getattr(nn, rnn_arch)(
input_size=hidden_size,
input_size=min(input_size, hidden_size),
hidden_size=hidden_size,
num_layers=num_layers,
batch_first=True,
@@ -517,7 +573,8 @@ class RNN(nn.Module):
def forward(self, x):
x = self.input_proj(x)
if self.input_proj is not None:
x = self.input_proj(x)
rnn_out, last_out = self.rnn(x)
if self.rnn_arch == "LSTM":
@@ -617,24 +674,36 @@ class TRA(nn.Module):
src_info (str): information for the router
"""
def __init__(self, input_size, num_states=1, hidden_size=8, tau=1.0, src_info="LR_TPE"):
def __init__(
self,
input_size,
num_states=1,
hidden_size=8,
rnn_arch="GRU",
num_layers=1,
dropout=0.0,
tau=1.0,
src_info="LR_TPE",
):
super().__init__()
assert src_info in ["LR", "TPE", "LR_TPE"], "invalid `src_info`"
self.num_states = num_states
self.tau = tau
self.rnn_arch = rnn_arch
self.src_info = src_info
self.predictors = nn.Linear(input_size, num_states)
if self.num_states > 1:
if "TPE" in src_info:
self.router = nn.GRU(
self.router = getattr(nn, rnn_arch)(
input_size=num_states,
hidden_size=hidden_size,
num_layers=1,
num_layers=num_layers,
batch_first=True,
dropout=dropout,
)
self.fc = nn.Linear(hidden_size + input_size if "LR" in src_info else hidden_size, num_states)
else:
@@ -652,7 +721,10 @@ class TRA(nn.Module):
return preds, None, None
if "TPE" in self.src_info:
out = self.router(hist_loss)[0][:, -1] # TPE
out = self.router(hist_loss)[1] # TPE
if self.rnn_arch == "LSTM":
out = out[0]
out = out.mean(dim=0)
if "LR" in self.src_info:
out = torch.cat([hidden, out], dim=-1) # LR_TPE
else:
@@ -677,26 +749,6 @@ def evaluate(pred):
return {"MSE": MSE, "MAE": MAE, "IC": IC}
def average_params(params_list):
assert isinstance(params_list, (tuple, list, collections.deque))
n = len(params_list)
if n == 1:
return params_list[0]
new_params = collections.OrderedDict()
keys = None
for i, params in enumerate(params_list):
if keys is None:
keys = params.keys()
for k, v in params.items():
if k not in keys:
raise ValueError("the %d-th model has different params" % i)
if k not in new_params:
new_params[k] = v / n
else:
new_params[k] += v / n
return new_params
def shoot_infs(inp_tensor):
"""Replaces inf by maximum of tensor"""
mask_inf = torch.isinf(inp_tensor)
@@ -716,7 +768,7 @@ def shoot_infs(inp_tensor):
return inp_tensor
def sinkhorn(Q, n_iters=3, epsilon=0.01):
def sinkhorn(Q, n_iters=3, epsilon=0.1):
# epsilon should be adjusted according to logits value's scale
with torch.no_grad():
Q = torch.exp(Q / epsilon)
@@ -734,7 +786,16 @@ def loss_fn(pred, label):
return (pred[mask] - label[mask]).pow(2).mean(dim=0)
def transport_sample(all_preds, label, choice, prob, count, transport_method, training=False):
def minmax_norm(x):
xmin = x.min(dim=-1, keepdim=True).values
xmax = x.max(dim=-1, keepdim=True).values
mask = (xmin == xmax).squeeze()
x = (x - xmin) / (xmax - xmin + 1e-12)
x[mask] = 1
return x
def transport_sample(all_preds, label, choice, prob, hist_loss, count, transport_method, alpha, training=False):
"""
sample-wise transport
@@ -743,39 +804,43 @@ def transport_sample(all_preds, label, choice, prob, count, transport_method, tr
label (torch.Tensor): label, [sample]
choice (torch.Tensor): gumbel softmax choice, [sample x states]
prob (torch.Tensor): router predicted probility, [sample x states]
hist_loss (torch.Tensor): history loss matrix, [sample x states]
count (list): sample counts for each day, empty list for sample-wise transport
transport_method (str): transportation method
alpha (float): fusion parameter for calculating transport loss matrix
training (bool): indicate training or inference
"""
assert all_preds.shape == choice.shape
assert len(all_preds) == len(label)
assert transport_method in ["oracle", "router"]
all_loss = (all_preds - label[:, None]).pow(2) # [sample x states]
all_loss[torch.isnan(label)] = 0.0
all_loss = torch.zeros_like(all_preds)
mask = ~torch.isnan(label)
all_loss[mask] = (all_preds[mask] - label[mask, None]).pow(2) # [sample x states]
L = minmax_norm(all_loss.detach())
Lh = L * alpha + minmax_norm(hist_loss) * (1 - alpha) # add hist loss for transport
Lh = minmax_norm(Lh)
P = sinkhorn(-Lh)
del Lh
if transport_method == "router":
if training: # router training
if training:
pred = (all_preds * choice).sum(dim=1) # gumbel softmax
else: # router inference
else:
pred = all_preds[range(len(all_preds)), prob.argmax(dim=-1)] # argmax
elif not training: # oracle inference: always choose the model with the smallest loss
pred = all_preds[range(len(all_preds)), all_loss.argmin(dim=-1)]
else: # oracle training: pred is not needed
pred = None
else:
pred = (all_preds * P).sum(dim=1)
L = (all_loss - all_loss.min(dim=1, keepdim=True).values).detach() # normalize
P = sinkhorn(-L) if training else None # use sinkhorn to get sample assignment during training
if pred is not None: # router training/inference & oracle inference loss
if transport_method == "router":
loss = loss_fn(pred, label)
else: # oracle training loss
else:
loss = (all_loss * P).sum(dim=1).mean()
return loss, pred, L, P
def transport_daily(all_preds, label, choice, prob, count, transport_method, training=False):
def transport_daily(all_preds, label, choice, prob, hist_loss, count, transport_method, alpha, training=False):
"""
daily transport
@@ -784,8 +849,10 @@ def transport_daily(all_preds, label, choice, prob, count, transport_method, tra
label (torch.Tensor): label, [sample]
choice (torch.Tensor): gumbel softmax choice, [days x states]
prob (torch.Tensor): router predicted probility, [days x states]
hist_loss (torch.Tensor): history loss matrix, [days x states]
count (list): sample counts for each day, [days]
transport_method (str): transportation method
alpha (float): fusion parameter for calculating transport loss matrix
training (bool): indicate training or inference
"""
assert len(prob) == len(count)
@@ -793,34 +860,85 @@ def transport_daily(all_preds, label, choice, prob, count, transport_method, tra
assert transport_method in ["oracle", "router"]
all_loss = [] # loss of all predictions
pred = [] # final predictions
start = 0
for i, cnt in enumerate(count):
slc = slice(start, start + cnt) # samples from the i-th day
start += cnt
tloss = loss_fn(all_preds[slc], label[slc]) # loss of the i-th day
all_loss.append(tloss)
if transport_method == "router":
if training: # router training
tpred = all_preds[slc] @ choice[i] # gumbel softmax
else: # router inference
tpred = all_preds[slc][:, prob[i].argmax(dim=-1)] # argmax
elif not training: # oracle inference: always choose the model with the smallest loss
tpred = all_preds[slc][:, tloss.argmin(dim=-1)]
else: # oracle training: pred is not needed
tpred = None
if tpred is not None:
pred.append(tpred)
all_loss = torch.stack(all_loss, dim=0) # [days x states]
if pred:
pred = torch.cat(pred, dim=0) # [samples]
L = (all_loss - all_loss.min(dim=1, keepdim=True).values).detach() # normalize
P = sinkhorn(-L) if training else None # use sinkhorn to get sample assignment during training
L = minmax_norm(all_loss.detach())
Lh = L * alpha + minmax_norm(hist_loss) * (1 - alpha) # add hist loss for transport
Lh = minmax_norm(Lh)
P = sinkhorn(-Lh)
del Lh
if len(pred): # router training/inference & oracle inference loss
pred = []
start = 0
for i, cnt in enumerate(count):
slc = slice(start, start + cnt) # samples from the i-th day
start += cnt
if transport_method == "router":
if training:
tpred = all_preds[slc] @ choice[i] # gumbel softmax
else:
tpred = all_preds[slc][:, prob[i].argmax(dim=-1)] # argmax
else:
tpred = all_preds[slc] @ P[i]
pred.append(tpred)
pred = torch.cat(pred, dim=0) # [samples]
if transport_method == "router":
loss = loss_fn(pred, label)
else: # oracle training loss
else:
loss = (all_loss * P).sum(dim=1).mean()
return loss, pred, L, P
def load_state_dict_unsafe(model, state_dict):
"""
Load state dict to provided model while ignore exceptions.
"""
missing_keys = []
unexpected_keys = []
error_msgs = []
# copy state_dict so _load_from_state_dict can modify it
metadata = getattr(state_dict, "_metadata", None)
state_dict = state_dict.copy()
if metadata is not None:
state_dict._metadata = metadata
def load(module, prefix=""):
local_metadata = {} if metadata is None else metadata.get(prefix[:-1], {})
module._load_from_state_dict(
state_dict, prefix, local_metadata, True, missing_keys, unexpected_keys, error_msgs
)
for name, child in module._modules.items():
if child is not None:
load(child, prefix + name + ".")
load(model)
load = None # break load->load reference cycle
return {"unexpected_keys": unexpected_keys, "missing_keys": missing_keys, "error_msgs": error_msgs}
def plot(P):
assert isinstance(P, pd.DataFrame)
fig, axes = plt.subplots(1, 2, figsize=(10, 4))
P.plot.area(ax=axes[0], xlabel="")
P.idxmax(axis=1).value_counts().sort_index().plot.bar(ax=axes[1], xlabel="")
plt.tight_layout()
with io.BytesIO() as buf:
plt.savefig(buf, format="png")
buf.seek(0)
img = plt.imread(buf)
plt.close()
return np.uint8(img * 255)