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tabnet
This commit is contained in:
@@ -231,6 +231,7 @@ Here is a list of models built on `Qlib`.
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- [GATs based on pytorch (Petar Velickovic, et al.)](qlib/contrib/model/pytorch_gats.py)
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- [SFM based on pytorch (Liheng Zhang, et al.)](qlib/contrib/model/pytorch_sfm.py)
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- [TFT based on tensorflow (Bryan Lim, et al.)](examples/benchmarks/TFT/tft.py)
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- [TabNet based on pytorch (Sercan O. Arik, et al.)](qlib/contrib/model/pytorch_tabnet.py)
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Your PR of new Quant models is highly welcomed.
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@@ -25,6 +25,7 @@ The numbers shown below demonstrate the performance of the entire `workflow` of
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| XGBoost (Tianqi Chen, et al.) | Alpha158 | 0.0481±0.00 | 0.3659±0.00| 0.0495±0.00 | 0.4033±0.00 | 0.1111±0.00 | 1.2915±0.00| -0.0893±0.00 |
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| LightGBM (Guolin Ke, et al.) | Alpha158 | 0.0475±0.00 | 0.3979±0.00| 0.0485±0.00 | 0.4123±0.00 | 0.1143±0.00 | 1.2744±0.00| -0.0800±0.00 |
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| MLP | Alpha158 | 0.0358±0.00 | 0.2738±0.03| 0.0425±0.00 | 0.3221±0.01 | 0.0836±0.02 | 1.0323±0.25| -0.1127±0.02 |
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| TabNet with pretrain (Sercan O. Arikm et al) | Alpha158 | 0.0344±0.00|0.205±0.11|0.0398±0.00 |0.3479±0.01|0.0827±0.02|1.1141±0.32 |-0.0925±0.02 |
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| TFT (Bryan Lim, et al.) | Alpha158 (with selected 20 features) | 0.0343±0.00 | 0.2071±0.02| 0.0107±0.00 | 0.0660±0.02 | 0.0623±0.02 | 0.5818±0.20| -0.1762±0.01 |
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| GRU (Kyunghyun Cho, et al.) | Alpha158 (with selected 20 features) | 0.0311±0.00 | 0.2418±0.04| 0.0425±0.00 | 0.3434±0.02 | 0.0330±0.02 | 0.4805±0.30| -0.1021±0.02 |
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| LSTM (Sepp Hochreiter, et al.) | Alpha158 (with selected 20 features) | 0.0312±0.00 | 0.2394±0.04| 0.0418±0.00 | 0.3324±0.03 | 0.0298±0.02 | 0.4198±0.33| -0.1348±0.03 |
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BIN
examples/benchmarks/TabNet/pretrain/best.model
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BIN
examples/benchmarks/TabNet/pretrain/best.model
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4
examples/benchmarks/TabNet/requirements.txt
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4
examples/benchmarks/TabNet/requirements.txt
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@@ -0,0 +1,4 @@
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pandas==1.1.2
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numpy==1.17.4
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scikit_learn==0.23.2
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torch==1.7.0
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@@ -0,0 +1,74 @@
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qlib_init:
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provider_uri: "~/.qlib/qlib_data/cn_data"
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region: cn
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market: &market csi300
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benchmark: &benchmark SH000300
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data_handler_config: &data_handler_config
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start_time: 2008-01-01
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end_time: 2020-08-01
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fit_start_time: 2008-01-01
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fit_end_time: 2014-12-31
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instruments: *market
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infer_processors:
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- class: RobustZScoreNorm
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kwargs:
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fields_group: feature
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clip_outlier: true
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- class: Fillna
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kwargs:
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fields_group: feature
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learn_processors:
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- class: DropnaLabel
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- class: CSRankNorm
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kwargs:
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fields_group: label
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label: ["Ref($close, -2) / Ref($close, -1) - 1"]
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port_analysis_config: &port_analysis_config
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strategy:
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class: TopkDropoutStrategy
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module_path: qlib.contrib.strategy.strategy
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kwargs:
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topk: 50
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n_drop: 5
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backtest:
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verbose: False
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limit_threshold: 0.095
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account: 100000000
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benchmark: *benchmark
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deal_price: close
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open_cost: 0.0005
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close_cost: 0.0015
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min_cost: 5
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task:
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model:
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class: TabNet_Model
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module_path: qlib.contrib.model.pytorch_tabnet
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kwargs:
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pretrain: True
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dataset:
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class: DatasetH
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module_path: qlib.data.dataset
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kwargs:
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handler:
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class: Alpha158
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module_path: qlib.contrib.data.handler
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kwargs: *data_handler_config
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segments:
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pretrain: [2008-01-01, 2014-12-31]
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pretrain_validation: [2015-01-01, 2020-08-01]
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train: [2008-01-01, 2014-12-31]
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valid: [2015-01-01, 2016-12-31]
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test: [2017-01-01, 2020-08-01]
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record:
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- class: SignalRecord
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module_path: qlib.workflow.record_temp
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kwargs: {}
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- class: SigAnaRecord
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module_path: qlib.workflow.record_temp
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kwargs:
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ana_long_short: False
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ann_scaler: 252
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- class: PortAnaRecord
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module_path: qlib.workflow.record_temp
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kwargs:
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config: *port_analysis_config
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616
qlib/contrib/model/pytorch_tabnet.py
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616
qlib/contrib/model/pytorch_tabnet.py
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@@ -0,0 +1,616 @@
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# Copyright (c) Microsoft Corporation.
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# Licensed under the MIT License.
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from __future__ import division
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from __future__ import print_function
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import os
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import numpy as np
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import pandas as pd
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import copy
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from sklearn.metrics import roc_auc_score, mean_squared_error
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import logging
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from ...utils import (
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unpack_archive_with_buffer,
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save_multiple_parts_file,
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create_save_path,
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drop_nan_by_y_index,
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)
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from ...log import get_module_logger, TimeInspector
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import torch
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import torch.nn as nn
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import torch.optim as optim
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import torch.nn.functional as F
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from torch.autograd import Function
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from ...model.base import Model
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from ...data.dataset import DatasetH
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from ...data.dataset.handler import DataHandlerLP
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class TabNet_Model(Model):
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def __init__(self, d_feat=158, out_dim = 64, final_out_dim = 1, batch_size = 4096, n_d=64, n_a=64, n_shared=2, n_ind=2,
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n_steps=5, n_epochs=100, pretrain_n_epochs=50, relax=1.3, vbs=2048, seed = 993, optimizer='adam', loss = 'mse',
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metric = '', early_stop = 20, GPU='1', pretrain_loss = 'custom', ps = 0.3, lr = 0.01, pretrain = True, pretrain_file = './pretrain/best.model'):
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"""
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TabNet model for Qlib
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Args:
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ps: probability to generate the bernoulli mask
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"""
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# set hyper-parameters.
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self.d_feat = d_feat
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self.out_dim = out_dim
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self.final_out_dim = final_out_dim
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self.lr = lr
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self.batch_size = batch_size
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self.optimizer = optimizer.lower()
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self.pretrain_loss = pretrain_loss
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self.seed = seed
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self.ps = ps
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self.n_epochs = n_epochs
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self.logger = get_module_logger("TabNet")
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self.pretrain_n_epochs = pretrain_n_epochs
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self.device = "cuda:%s" % (GPU) if torch.cuda.is_available() else "cpu"
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self.loss = loss
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self.metric = metric
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self.early_stop = early_stop
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self.pretrain = pretrain
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self.pretrain_file = pretrain_file
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self.logger.info(
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"TabNet:"
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"\nbatch_size : {}"
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"\nvirtual bs : {}"
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"\nGPU : {}"
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"\npretrain: {}".format(
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self.batch_size,
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vbs,
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GPU,
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pretrain
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)
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)
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np.random.seed(self.seed)
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torch.manual_seed(self.seed)
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self.tabnet_model = TabNet(inp_dim = self.d_feat, out_dim = self.out_dim, vbs = vbs, relax = relax, device = self.device).to(self.device)
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self.tabnet_decoder = TabNet_Decoder(self.out_dim, self.d_feat, n_shared, n_ind, vbs, n_steps, self.device).to(self.device)
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if optimizer.lower() == "adam":
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self.pretrain_optimizer = optim.Adam(list(self.tabnet_model.parameters())+list(self.tabnet_decoder.parameters()), lr=self.lr)
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self.train_optimizer = optim.Adam(self.tabnet_model.parameters(), lr=self.lr)
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elif optimizer.lower() == "gd":
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self.pretrain_optimizer = optim.SGD(list(self.tabnet_model.parameters())+list(self.tabnet_decoder.parameters()), lr=self.lr)
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self.train_optimizer = optim.SGD(self.tabnet_model.parameters(), lr=self.lr)
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else:
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raise NotImplementedError("optimizer {} is not supported!".format(optimizer))
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def pretrain_fn(self, dataset = DatasetH, pretrain_file = './pretrain/best.model'):
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# make a directory if pretrian director does not exist
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if pretrain_file.startswith('./pretrain') and not os.path.exists('pretrain'):
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self.logger.info("make folder to store model...")
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os.makedirs('pretrain')
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[df_train, df_valid] = dataset.prepare(
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["pretrain", "pretrain_validation"],
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col_set=["feature", "label"],
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data_key=DataHandlerLP.DK_L,
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)
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df_train.fillna(df_train.mean(), inplace = True)
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df_valid.fillna(df_valid.mean(), inplace = True)
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x_train = df_train["feature"]
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x_valid = df_valid["feature"]
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# Early stop setup
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stop_steps = 0
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train_loss = 0
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best_loss = np.inf
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for epoch_idx in range(self.pretrain_n_epochs):
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self.logger.info('epoch: %s' % (epoch_idx))
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self.logger.info("pre-training...")
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self.pretrain_epoch(x_train)
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self.logger.info("evaluating...")
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train_loss = self.pretrain_test_epoch(x_train)
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valid_loss = self.pretrain_test_epoch(x_valid)
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self.logger.info("train %.6f, valid %.6f" % (train_loss, valid_loss))
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if valid_loss < best_loss:
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self.logger.info("Save Model...")
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torch.save(self.tabnet_model.state_dict(), pretrain_file)
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best_loss = valid_loss
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else:
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stop_steps+=1
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if stop_steps >= self.early_stop:
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self.logger.info("early stop")
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break
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def fit(
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self,
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dataset: DatasetH,
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evals_result=dict(),
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verbose=True,
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save_path=None,
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):
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if(self.pretrain):
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#there is a pretrained model, load the model
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self.logger.info("Pretrain...")
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self.pretrain_fn(dataset, self.pretrain_file)
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self.logger.info("Load Pretrain model")
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self.tabnet_model.load_state_dict(torch.load(self.pretrain_file))
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#adding one more linear layer to fit the final output dimension
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self.tabnet_model = FinetuneModel(self.out_dim, self.final_out_dim, self.tabnet_model).to(self.device)
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df_train, df_valid = dataset.prepare(
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["train", "valid"],
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col_set=["feature", "label"],
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data_key=DataHandlerLP.DK_L,
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)
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df_train.fillna(df_train.mean(), inplace = True)
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x_train, y_train = df_train["feature"], df_train["label"]
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x_valid, y_valid = df_valid["feature"], df_valid["label"]
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stop_steps = 0
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train_loss = 0
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best_score = np.inf
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best_epoch = 0
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evals_result["train"] = []
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evals_result["valid"] = []
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self.logger.info("training...")
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self._fitted = True
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for epoch_idx in range(self.n_epochs):
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self.logger.info('epoch: %s' % (epoch_idx))
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self.logger.info("training...")
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self.train_epoch(x_train, y_train)
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self.logger.info("evaluating...")
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train_loss, train_score = self.test_epoch(x_train, y_train)
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valid_loss, val_score = self.test_epoch(x_valid, y_valid)
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self.logger.info("train %.6f, valid %.6f" % (train_score, val_score))
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evals_result["train"].append(train_score)
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evals_result["valid"].append(val_score)
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if val_score < best_score:
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best_score = val_score
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stop_steps = 0
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best_epoch = epoch_idx
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else:
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stop_steps += 1
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if stop_steps >= self.early_stop:
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self.logger.info("early stop")
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break
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self.logger.info("best score: %.6lf @ %d" % (best_score, best_epoch))
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def predict(self, dataset):
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if not self._fitted:
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raise ValueError("model is not fitted yet!")
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x_test = dataset.prepare("test", col_set="feature", data_key=DataHandlerLP.DK_I)
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index = x_test.index
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self.tabnet_model.eval()
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x_values = torch.from_numpy(x_test.values)
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x_values[torch.isnan(x_values)] = 0
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sample_num = x_values.shape[0]
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preds = []
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for begin in range(sample_num)[:: self.batch_size]:
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if sample_num - begin < self.batch_size:
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end = sample_num
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else:
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end = begin + self.batch_size
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x_batch = x_values[begin:end].float().to(self.device)
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priors = torch.ones(end - begin, self.d_feat).to(self.device)
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with torch.no_grad():
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pred = self.tabnet_model(x_batch, priors).detach().cpu().numpy()
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preds.append(pred)
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return pd.Series(np.concatenate(preds), index=index)
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def test_epoch(self, data_x, data_y):
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# prepare training data
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x_values = torch.from_numpy(data_x.values)
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y_values = torch.from_numpy(np.squeeze(data_y.values))
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x_values[torch.isnan(x_values)] = 0
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y_values[torch.isnan(y_values)] = 0
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self.tabnet_model.eval()
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scores = []
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losses = []
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indices = np.arange(len(x_values))
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for i in range(len(indices))[:: self.batch_size]:
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if len(indices) - i < self.batch_size:
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break
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feature = x_values[indices[i : i + self.batch_size]].float().to(self.device)
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label = y_values[indices[i : i + self.batch_size]].float().to(self.device)
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priors = torch.ones(self.batch_size, self.d_feat).to(self.device)
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pred = self.tabnet_model(feature, priors)
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loss = self.loss_fn(pred, label)
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losses.append(loss.item())
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score = self.metric_fn(pred, label)
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scores.append(score.item())
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return np.mean(losses), np.mean(scores)
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def train_epoch(self, x_train, y_train):
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x_train_values = torch.from_numpy(x_train.values)
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y_train_values = torch.from_numpy(np.squeeze(y_train.values))
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x_train_values[torch.isnan(x_train_values)] = 0
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y_train_values[torch.isnan(y_train_values)] = 0
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self.tabnet_model.train()
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indices = np.arange(len(x_train_values))
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np.random.shuffle(indices)
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for i in range(len(indices))[:: self.batch_size]:
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if len(indices) - i < self.batch_size:
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break
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feature = x_train_values[indices[i : i + self.batch_size]].float().to(self.device)
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label = y_train_values[indices[i : i + self.batch_size]].float().to(self.device)
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priors = torch.ones(self.batch_size, self.d_feat).to(self.device)
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pred = self.tabnet_model(feature, priors)
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loss = self.loss_fn(pred, label)
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self.train_optimizer.zero_grad()
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loss.backward()
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torch.nn.utils.clip_grad_value_(self.tabnet_model.parameters(), 3.0)
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self.train_optimizer.step()
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def pretrain_epoch(self, x_train):
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train_set = torch.from_numpy(x_train.values)
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train_set[torch.isnan(train_set)] = 0
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indices = np.arange(len(train_set))
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np.random.shuffle(indices)
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self.tabnet_model.train()
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self.tabnet_decoder.train()
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for i in range(len(indices))[:: self.batch_size]:
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if len(indices) - i < self.batch_size:
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break
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S_mask = torch.bernoulli(torch.empty(self.batch_size, self.d_feat).fill_(self.ps))
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x_train_values = train_set[indices[i : i + self.batch_size]] * (1-S_mask)
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y_train_values = train_set[indices[i : i + self.batch_size]] * (S_mask)
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S_mask = S_mask.to(self.device)
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feature = x_train_values.float().to(self.device)
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label = y_train_values.float().to(self.device)
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priors = 1 - S_mask
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(vec, sparse_loss) = self.tabnet_model(feature, priors)
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f = self.tabnet_decoder(vec)
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loss = self.pretrain_loss_fn(label, f, S_mask)
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self.pretrain_optimizer.zero_grad()
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loss.backward()
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self.pretrain_optimizer.step()
|
||||
|
||||
def pretrain_test_epoch(self, x_train):
|
||||
train_set = torch.from_numpy(x_train.values)
|
||||
train_set[torch.isnan(train_set)] = 0
|
||||
indices = np.arange(len(train_set))
|
||||
|
||||
self.tabnet_model.eval()
|
||||
self.tabnet_decoder.eval()
|
||||
|
||||
losses = []
|
||||
|
||||
for i in range(len(indices))[:: self.batch_size]:
|
||||
|
||||
if len(indices) - i < self.batch_size:
|
||||
break
|
||||
|
||||
S_mask = torch.bernoulli(torch.empty(self.batch_size, self.d_feat).fill_(self.ps))
|
||||
x_train_values = train_set[indices[i : i + self.batch_size]] * (1-S_mask)
|
||||
y_train_values = train_set[indices[i : i + self.batch_size]] * (S_mask)
|
||||
|
||||
feature = x_train_values.float().to(self.device)
|
||||
label = y_train_values.float().to(self.device)
|
||||
S_mask = S_mask.to(self.device)
|
||||
priors = 1-S_mask
|
||||
(vec, sparse_loss) = self.tabnet_model(feature, priors)
|
||||
f = self.tabnet_decoder(vec)
|
||||
|
||||
loss = self.pretrain_loss_fn(label, f, S_mask)
|
||||
losses.append(loss.item())
|
||||
|
||||
return np.mean(losses)
|
||||
|
||||
def pretrain_loss_fn(self, f_hat, f, S):
|
||||
"""
|
||||
Pretrain loss function defined in the original paper, read "Tabular self-supervised learning" in https://arxiv.org/pdf/1908.07442.pdf
|
||||
"""
|
||||
down_mean = torch.mean(f, dim=0)
|
||||
down = torch.sqrt(torch.sum(torch.square(f-down_mean), dim = 0))
|
||||
up = (f_hat - f)*S
|
||||
return torch.sum(torch.square(up/down))
|
||||
|
||||
def loss_fn(self, pred, label):
|
||||
mask = ~torch.isnan(label)
|
||||
if self.loss == "mse":
|
||||
return self.mse(pred[mask], label[mask])
|
||||
raise ValueError("unknown loss `%s`" % self.loss)
|
||||
|
||||
def metric_fn(self, pred, label):
|
||||
mask = torch.isfinite(label)
|
||||
if self.metric == "" or self.metric == "loss":
|
||||
return -self.loss_fn(pred[mask], label[mask])
|
||||
raise ValueError("unknown metric `%s`" % self.metric)
|
||||
|
||||
def mse(self, pred, label):
|
||||
loss = (pred - label) ** 2
|
||||
return torch.mean(loss)
|
||||
|
||||
|
||||
class FinetuneModel(nn.Module):
|
||||
"""
|
||||
FinuetuneModel for adding a layer by the end
|
||||
"""
|
||||
def __init__(self, input_dim, output_dim, trained_model):
|
||||
super().__init__()
|
||||
self.model = trained_model
|
||||
self.fc = nn.Linear(input_dim, output_dim)
|
||||
def forward(self, x, priors):
|
||||
return self.fc(self.model(x, priors)[0]).squeeze()# take the vec out
|
||||
|
||||
|
||||
class DecoderStep(nn.Module):
|
||||
def __init__(self, inp_dim, out_dim, shared, n_ind, vbs, device):
|
||||
super().__init__()
|
||||
self.fea_tran = FeatureTransformer(inp_dim, out_dim, shared, n_ind, vbs, device)
|
||||
self.fc = nn.Linear(out_dim, out_dim)
|
||||
|
||||
|
||||
def forward(self, x):
|
||||
x = self.fea_tran(x)
|
||||
return self.fc(x)
|
||||
|
||||
|
||||
|
||||
class TabNet_Decoder(nn.Module):
|
||||
def __init__(self, inp_dim, out_dim, n_shared, n_ind, vbs, n_steps, device):
|
||||
"""
|
||||
TabNet decoder that is used in pre-training
|
||||
"""
|
||||
self.out_dim = out_dim
|
||||
|
||||
super().__init__()
|
||||
if n_shared > 0:
|
||||
self.shared = nn.ModuleList()
|
||||
self.shared.append(nn.Linear(inp_dim, 2*out_dim))
|
||||
for x in range(n_shared - 1):
|
||||
self.shared.append(nn.Linear(out_dim, 2*out_dim)) # preset the linear function we will use
|
||||
else:
|
||||
self.shared=None
|
||||
self.n_steps = n_steps
|
||||
self.steps = nn.ModuleList()
|
||||
for x in range(n_steps):
|
||||
self.steps.append(DecoderStep(inp_dim, out_dim, self.shared, n_ind, vbs, device))
|
||||
|
||||
def forward(self, x):
|
||||
out = torch.zeros(x.size(0), self.out_dim).to(x.device)
|
||||
for step in self.steps:
|
||||
out += step(x)
|
||||
return out
|
||||
|
||||
|
||||
|
||||
class TabNet(nn.Module):
|
||||
def __init__(self, inp_dim=6, out_dim=6, n_d=64, n_a=64, n_shared=2, n_ind=2, n_steps=5, relax=1.2, vbs=1024, device = 'cpu'):
|
||||
"""
|
||||
TabNet AKA the original encoder
|
||||
|
||||
Args:
|
||||
n_d: dimension of the features used to calculate the final results
|
||||
n_a: dimension of the features input to the attention transformer of the next step
|
||||
n_shared: numbr of shared steps in feature transfomer(optional)
|
||||
n_ind: number of independent steps in feature transformer
|
||||
n_steps: number of steps of pass through tabbet
|
||||
relax coefficient:
|
||||
virtual batch size:
|
||||
"""
|
||||
super().__init__()
|
||||
|
||||
# set the number of shared step in feature transformer
|
||||
if n_shared > 0:
|
||||
self.shared = nn.ModuleList()
|
||||
self.shared.append(nn.Linear(inp_dim, 2 * (n_d + n_a)))
|
||||
for x in range(n_shared - 1):
|
||||
self.shared.append(nn.Linear(n_d + n_a, 2 * (n_d + n_a))) # preset the linear function we will use
|
||||
else:
|
||||
self.shared=None
|
||||
|
||||
self.first_step = FeatureTransformer(inp_dim, n_d + n_a, self.shared, n_ind, vbs, device)
|
||||
self.steps = nn.ModuleList()
|
||||
for x in range(n_steps-1):
|
||||
self.steps.append(DecisionStep(inp_dim, n_d, n_a, self.shared, n_ind, relax, vbs, device))
|
||||
self.fc = nn.Linear(n_d, out_dim)
|
||||
self.bn = nn.BatchNorm1d(inp_dim, momentum=0.01)
|
||||
self.n_d = n_d
|
||||
|
||||
def forward(self, x, priors):
|
||||
assert not torch.isnan(x).any()
|
||||
x = self.bn(x)
|
||||
x_a = self.first_step(x)[:, self.n_d:]
|
||||
sparse_loss = torch.zeros(1).to(x.device)
|
||||
out = torch.zeros(x.size(0), self.n_d).to(x.device)
|
||||
for step in self.steps:
|
||||
x_te, l = step(x, x_a, priors)
|
||||
out += F.relu(x_te[:, :self.n_d]) #split the feautre from feat_transformer
|
||||
x_a = x_te[:, self.n_d:]
|
||||
sparse_loss += l
|
||||
return self.fc(out), sparse_loss
|
||||
|
||||
|
||||
class GBN(nn.Module):
|
||||
"""
|
||||
Ghost Batch Normalization
|
||||
an efficient way of doing batch normalization
|
||||
|
||||
Args:
|
||||
vbs: virtual batch size
|
||||
"""
|
||||
def __init__(self, inp, vbs=1024, momentum=0.01):
|
||||
super().__init__()
|
||||
self.bn = nn.BatchNorm1d(inp, momentum=momentum)
|
||||
self.vbs = vbs
|
||||
|
||||
def forward(self, x):
|
||||
chunk = torch.chunk(x, x.size(0)//self.vbs,0)
|
||||
res = [self.bn(y) for y in chunk]
|
||||
return torch.cat(res, 0)
|
||||
|
||||
|
||||
class GLU(nn.Module):
|
||||
"""
|
||||
GLU block that extracts only the most essential information
|
||||
|
||||
Args:
|
||||
vbs: virtual batch size
|
||||
"""
|
||||
def __init__(self, inp_dim, out_dim, fc=None, vbs=1024):
|
||||
super().__init__()
|
||||
if fc:
|
||||
self.fc = fc
|
||||
else:
|
||||
self.fc = nn.Linear(inp_dim, out_dim*2)
|
||||
self.bn = GBN(out_dim * 2, vbs=vbs)
|
||||
self.od = out_dim
|
||||
|
||||
def forward(self, x):
|
||||
x = self.bn(self.fc(x))
|
||||
return torch.mul(x[:, :self.od], torch.sigmoid(x[:, self.od:]))
|
||||
|
||||
|
||||
class AttentionTransformer(nn.Module):
|
||||
"""
|
||||
Args:
|
||||
relax: relax coefficient. The greater it is, we can
|
||||
use the same features more. When it is set to 1
|
||||
we can use every feature only once
|
||||
"""
|
||||
def __init__(self, d_a, inp_dim, relax, vbs=1024):
|
||||
super().__init__()
|
||||
self.fc = nn.Linear(d_a, inp_dim)
|
||||
self.bn = GBN(inp_dim, vbs=vbs)
|
||||
self.r = relax
|
||||
|
||||
#a:feature from previous decision step
|
||||
def forward(self, a, priors):
|
||||
a = self.bn(self.fc(a))
|
||||
mask = SparsemaxFunction.apply(a * priors)
|
||||
priors = priors * (self.r - mask) #updating the prior
|
||||
return mask
|
||||
|
||||
|
||||
class FeatureTransformer(nn.Module):
|
||||
def __init__(self, inp_dim, out_dim, shared, n_ind, vbs, device):
|
||||
super().__init__()
|
||||
first = True
|
||||
self.shared = nn.ModuleList()
|
||||
if shared:
|
||||
self.shared.append(GLU(inp_dim, out_dim, shared[0], vbs=vbs))
|
||||
first= False
|
||||
for fc in shared[1:]:
|
||||
self.shared.append(GLU(out_dim, out_dim, fc, vbs=vbs))
|
||||
else:
|
||||
self.shared = None
|
||||
self.independ = nn.ModuleList()
|
||||
if first:
|
||||
self.independ.append(GLU(inp,out_dim,vbs=vbs))
|
||||
for x in range(first, n_ind):
|
||||
self.independ.append(GLU(out_dim,out_dim,vbs=vbs))
|
||||
self.scale = torch.sqrt(torch.tensor([.5], device=device))
|
||||
|
||||
def forward(self, x):
|
||||
if self.shared:
|
||||
x = self.shared[0](x)
|
||||
for glu in self.shared[1:]:
|
||||
x = torch.add(x, glu(x))
|
||||
x = x * self.scale
|
||||
for glu in self.independ:
|
||||
x = torch.add(x, glu(x))
|
||||
x = x * self.scale
|
||||
return x
|
||||
|
||||
|
||||
|
||||
class DecisionStep(nn.Module):
|
||||
"""
|
||||
One step for the TabNet
|
||||
"""
|
||||
def __init__(self, inp_dim, n_d, n_a, shared, n_ind, relax, vbs, device):
|
||||
super().__init__()
|
||||
self.atten_tran = AttentionTransformer(n_a, inp_dim, relax,vbs)
|
||||
self.fea_tran = FeatureTransformer(inp_dim, n_d + n_a, shared, n_ind, vbs, device)
|
||||
|
||||
def forward(self, x, a, priors):
|
||||
mask = self.atten_tran(a, priors)
|
||||
sparse_loss = ((-1)*mask*torch.log(mask+1e-10)).mean()
|
||||
x = self.fea_tran(x * mask)
|
||||
return x ,sparse_loss
|
||||
|
||||
|
||||
|
||||
def make_ix_like(input, dim=0):
|
||||
d = input.size(dim)
|
||||
rho = torch.arange(1, d + 1, device=input.device, dtype=input.dtype)
|
||||
view = [1] * input.dim()
|
||||
view[0] = -1
|
||||
return rho.view(view).transpose(0, dim)
|
||||
|
||||
class SparsemaxFunction(Function):
|
||||
"""
|
||||
SparseMax function for replacing reLU
|
||||
"""
|
||||
@staticmethod
|
||||
def forward(ctx, input, dim=-1):
|
||||
ctx.dim = dim
|
||||
max_val, _ = input.max(dim=dim, keepdim=True)
|
||||
input -= max_val # same numerical stability trick as for softmax
|
||||
tau, supp_size = SparsemaxFunction.threshold_and_support(input, dim=dim)
|
||||
output = torch.clamp(input - tau, min=0)
|
||||
ctx.save_for_backward(supp_size, output)
|
||||
return output
|
||||
|
||||
@staticmethod
|
||||
def backward(ctx, grad_output):
|
||||
supp_size, output = ctx.saved_tensors
|
||||
dim = ctx.dim
|
||||
grad_input = grad_output.clone()
|
||||
grad_input[output == 0] = 0
|
||||
|
||||
v_hat = grad_input.sum(dim=dim) / supp_size.to(output.dtype).squeeze()
|
||||
v_hat = v_hat.unsqueeze(dim)
|
||||
grad_input = torch.where(output != 0, grad_input - v_hat, grad_input)
|
||||
return grad_input, None
|
||||
|
||||
@staticmethod
|
||||
def threshold_and_support(input, dim=-1):
|
||||
input_srt, _ = torch.sort(input, descending=True, dim=dim)
|
||||
input_cumsum = input_srt.cumsum(dim) - 1
|
||||
rhos = make_ix_like(input, dim)
|
||||
support = rhos * input_srt > input_cumsum
|
||||
|
||||
support_size = support.sum(dim=dim).unsqueeze(dim)
|
||||
tau = input_cumsum.gather(dim, support_size - 1)
|
||||
tau /= support_size.to(input.dtype)
|
||||
return tau, support_size
|
||||
Reference in New Issue
Block a user