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https://github.com/pgvector/pgvector.git
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Compare commits
6 Commits
v0.6.0
...
hnsw-query
| Author | SHA1 | Date | |
|---|---|---|---|
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0d8cc82908 | ||
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2716a223a6 | ||
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3697043898 | ||
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c22740962c | ||
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a55ecf3281 | ||
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fecdd5794e |
@@ -1,10 +1,14 @@
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## 0.6.1 (unreleased)
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- Fixed error with `ANALYZE` and vectors with different dimensions
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## 0.6.0 (2024-01-29)
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If upgrading with Postgres 12 or Docker, see [these notes](https://github.com/pgvector/pgvector#060).
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- Changed storage for vector from `extended` to `external`
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- Added support for parallel index builds for HNSW
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- Added validation for GUC parameters
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- Changed storage for vector from `extended` to `external`
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- Improved performance of HNSW
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- Reduced memory usage for HNSW index builds
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- Reduced WAL generation for HNSW index builds
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13
README.md
13
README.md
@@ -16,7 +16,7 @@ Plus [ACID](https://en.wikipedia.org/wiki/ACID) compliance, point-in-time recove
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### Linux and Mac
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Compile and install the extension (supports Postgres 11+)
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Compile and install the extension (supports Postgres 12+)
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```sh
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cd /tmp
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@@ -430,6 +430,15 @@ To speed up queries with an IVFFlat index, increase the number of inverted lists
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CREATE INDEX ON items USING ivfflat (embedding vector_l2_ops) WITH (lists = 1000);
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```
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## Vacuuming
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Vacuuming can take a while for HNSW indexes. Speed it up by reindexing first.
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```sql
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REINDEX INDEX CONCURRENTLY index_name;
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VACUUM table_name;
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```
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## Languages
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Use pgvector from any language with a Postgres client. You can even generate and store vectors in one language and query them in another.
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@@ -657,7 +666,7 @@ Get the [Docker image](https://hub.docker.com/r/pgvector/pgvector) with:
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docker pull pgvector/pgvector:pg16
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```
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This adds pgvector to the [Postgres image](https://hub.docker.com/_/postgres) (run it the same way).
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This adds pgvector to the [Postgres image](https://hub.docker.com/_/postgres) (replace `16` with your Postgres server version, and run it the same way).
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You can also build the image manually:
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11
src/hnsw.h
11
src/hnsw.h
@@ -362,6 +362,11 @@ typedef struct HnswVacuumState
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MemoryContext tmpCtx;
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} HnswVacuumState;
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typedef struct HnswQuery
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{
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Datum value;
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} HnswQuery;
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/* Methods */
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int HnswGetM(Relation index);
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int HnswGetEfConstruction(Relation index);
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@@ -370,14 +375,14 @@ bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * re
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Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
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void HnswInitPage(Buffer buf, Page page);
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void HnswInit(void);
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List *HnswSearchLayer(char *base, Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
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List *HnswSearchLayer(char *base, HnswQuery * q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
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HnswElement HnswGetEntryPoint(Relation index);
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void HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint);
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void *HnswAlloc(HnswAllocator * allocator, Size size);
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HnswElement HnswInitElement(char *base, ItemPointer tid, int m, double ml, int maxLevel, HnswAllocator * alloc);
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HnswElement HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno);
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void HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint, Relation index, FmgrInfo *procinfo, Oid collation, int m, int efConstruction, bool existing);
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HnswCandidate *HnswEntryCandidate(char *base, HnswElement em, Datum q, Relation rel, FmgrInfo *procinfo, Oid collation, bool loadVec);
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HnswCandidate *HnswEntryCandidate(char *base, HnswElement em, HnswQuery * q, Relation rel, FmgrInfo *procinfo, Oid collation, bool loadVec);
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void HnswUpdateMetaPage(Relation index, int updateEntry, HnswElement entryPoint, BlockNumber insertPage, ForkNumber forkNum, bool building);
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void HnswSetNeighborTuple(char *base, HnswNeighborTuple ntup, HnswElement e, int m);
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void HnswAddHeapTid(HnswElement element, ItemPointer heaptid);
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@@ -385,7 +390,7 @@ void HnswInitNeighbors(char *base, HnswElement element, int m, HnswAllocator *
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bool HnswInsertTupleOnDisk(Relation index, Datum value, Datum *values, bool *isnull, ItemPointer heap_tid, bool building);
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void HnswUpdateNeighborsOnDisk(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting, bool building);
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void HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec);
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void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec);
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void HnswLoadElement(HnswElement element, float *distance, HnswQuery * q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec);
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void HnswSetElementTuple(char *base, HnswElementTuple etup, HnswElement element);
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void HnswUpdateConnection(char *base, HnswElement element, HnswCandidate * hc, int lm, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
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void HnswLoadNeighbors(HnswElement element, Relation index, int m);
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@@ -11,7 +11,7 @@
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* Algorithm 5 from paper
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*/
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static List *
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GetScanItems(IndexScanDesc scan, Datum q)
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GetScanItems(IndexScanDesc scan, Datum value)
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{
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HnswScanOpaque so = (HnswScanOpaque) scan->opaque;
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Relation index = scan->indexRelation;
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@@ -22,6 +22,9 @@ GetScanItems(IndexScanDesc scan, Datum q)
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int m;
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HnswElement entryPoint;
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char *base = NULL;
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HnswQuery q;
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q.value = value;
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/* Get m and entry point */
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HnswGetMetaPageInfo(index, &m, &entryPoint);
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@@ -29,15 +32,15 @@ GetScanItems(IndexScanDesc scan, Datum q)
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if (entryPoint == NULL)
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return NIL;
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ep = list_make1(HnswEntryCandidate(base, entryPoint, q, index, procinfo, collation, false));
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ep = list_make1(HnswEntryCandidate(base, entryPoint, &q, index, procinfo, collation, false));
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for (int lc = entryPoint->level; lc >= 1; lc--)
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{
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w = HnswSearchLayer(base, q, ep, 1, lc, index, procinfo, collation, m, false, NULL);
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w = HnswSearchLayer(base, &q, ep, 1, lc, index, procinfo, collation, m, false, NULL);
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ep = w;
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}
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return HnswSearchLayer(base, q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
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return HnswSearchLayer(base, &q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
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}
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/*
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@@ -555,7 +555,7 @@ HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHe
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* Load an element and optionally get its distance from q
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*/
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void
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HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec)
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HnswLoadElement(HnswElement element, float *distance, HnswQuery * q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec)
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{
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Buffer buf;
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Page page;
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@@ -575,7 +575,7 @@ HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index,
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/* Calculate distance */
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if (distance != NULL)
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*distance = (float) DatumGetFloat8(FunctionCall2Coll(procinfo, collation, *q, PointerGetDatum(&etup->data)));
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*distance = (float) DatumGetFloat8(FunctionCall2Coll(procinfo, collation, q->value, PointerGetDatum(&etup->data)));
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UnlockReleaseBuffer(buf);
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}
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@@ -584,19 +584,19 @@ HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index,
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* Get the distance for a candidate
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*/
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static float
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GetCandidateDistance(char *base, HnswCandidate * hc, Datum q, FmgrInfo *procinfo, Oid collation)
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GetCandidateDistance(char *base, HnswCandidate * hc, HnswQuery * q, FmgrInfo *procinfo, Oid collation)
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{
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HnswElement hce = HnswPtrAccess(base, hc->element);
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Datum value = HnswGetValue(base, hce);
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return DatumGetFloat8(FunctionCall2Coll(procinfo, collation, q, value));
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return DatumGetFloat8(FunctionCall2Coll(procinfo, collation, q->value, value));
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}
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/*
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* Create a candidate for the entry point
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*/
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HnswCandidate *
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HnswEntryCandidate(char *base, HnswElement entryPoint, Datum q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec)
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HnswEntryCandidate(char *base, HnswElement entryPoint, HnswQuery * q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec)
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{
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HnswCandidate *hc = palloc(sizeof(HnswCandidate));
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@@ -604,7 +604,7 @@ HnswEntryCandidate(char *base, HnswElement entryPoint, Datum q, Relation index,
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if (index == NULL)
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hc->distance = GetCandidateDistance(base, hc, q, procinfo, collation);
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else
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HnswLoadElement(entryPoint, &hc->distance, &q, index, procinfo, collation, loadVec);
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HnswLoadElement(entryPoint, &hc->distance, q, index, procinfo, collation, loadVec);
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return hc;
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}
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@@ -722,7 +722,7 @@ CountElement(char *base, HnswElement skipElement, HnswCandidate * hc)
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* Algorithm 2 from paper
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*/
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List *
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HnswSearchLayer(char *base, Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement)
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HnswSearchLayer(char *base, HnswQuery * q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement)
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{
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List *w = NIL;
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pairingheap *C = pairingheap_allocate(CompareNearestCandidates, NULL);
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@@ -806,7 +806,7 @@ HnswSearchLayer(char *base, Datum q, List *ep, int ef, int lc, Relation index, F
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if (index == NULL)
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eDistance = GetCandidateDistance(base, e, q, procinfo, collation);
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else
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HnswLoadElement(eElement, &eDistance, &q, index, procinfo, collation, inserting);
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HnswLoadElement(eElement, &eDistance, q, index, procinfo, collation, inserting);
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Assert(!eElement->deleted);
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@@ -1091,7 +1091,9 @@ HnswUpdateConnection(char *base, HnswElement element, HnswCandidate * hc, int lm
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/* Load elements on insert */
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if (index != NULL)
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{
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Datum q = HnswGetValue(base, hce);
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HnswQuery q;
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q.value = HnswGetValue(base, hce);
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for (int i = 0; i < currentNeighbors->length; i++)
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{
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@@ -1101,7 +1103,7 @@ HnswUpdateConnection(char *base, HnswElement element, HnswCandidate * hc, int lm
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if (HnswPtrIsNull(base, hc3Element->value))
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HnswLoadElement(hc3Element, &hc3->distance, &q, index, procinfo, collation, true);
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else
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hc3->distance = GetCandidateDistance(base, hc3, q, procinfo, collation);
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hc3->distance = GetCandidateDistance(base, hc3, &q, procinfo, collation);
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/* Prune element if being deleted */
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if (hc3Element->heaptidsLength == 0)
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@@ -1201,9 +1203,11 @@ HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint
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List *w;
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int level = element->level;
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int entryLevel;
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Datum q = HnswGetValue(base, element);
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HnswQuery q;
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HnswElement skipElement = existing ? element : NULL;
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q.value = HnswGetValue(base, element);
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#if PG_VERSION_NUM >= 130000
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/* Precompute hash */
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if (index == NULL)
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@@ -1215,13 +1219,13 @@ HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint
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return;
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/* Get entry point and level */
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ep = list_make1(HnswEntryCandidate(base, entryPoint, q, index, procinfo, collation, true));
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ep = list_make1(HnswEntryCandidate(base, entryPoint, &q, index, procinfo, collation, true));
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entryLevel = entryPoint->level;
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/* 1st phase: greedy search to insert level */
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for (int lc = entryLevel; lc >= level + 1; lc--)
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{
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w = HnswSearchLayer(base, q, ep, 1, lc, index, procinfo, collation, m, true, skipElement);
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w = HnswSearchLayer(base, &q, ep, 1, lc, index, procinfo, collation, m, true, skipElement);
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ep = w;
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}
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@@ -1239,7 +1243,7 @@ HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint
|
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List *neighbors;
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List *lw;
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|
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w = HnswSearchLayer(base, q, ep, efConstruction, lc, index, procinfo, collation, m, true, skipElement);
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w = HnswSearchLayer(base, &q, ep, efConstruction, lc, index, procinfo, collation, m, true, skipElement);
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|
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/* Elements being deleted or skipped can help with search */
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/* but should be removed before selecting neighbors */
|
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|
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30
src/vector.c
30
src/vector.c
@@ -866,9 +866,10 @@ vector_mul(PG_FUNCTION_ARGS)
|
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int
|
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vector_cmp_internal(Vector * a, Vector * b)
|
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{
|
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CheckDims(a, b);
|
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int dim = Min(a->dim, b->dim);
|
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|
||||
for (int i = 0; i < a->dim; i++)
|
||||
/* Check values before dimensions to be consistent with Postgres arrays */
|
||||
for (int i = 0; i < dim; i++)
|
||||
{
|
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if (a->x[i] < b->x[i])
|
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return -1;
|
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@@ -876,6 +877,13 @@ vector_cmp_internal(Vector * a, Vector * b)
|
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if (a->x[i] > b->x[i])
|
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return 1;
|
||||
}
|
||||
|
||||
if (a->dim < b->dim)
|
||||
return -1;
|
||||
|
||||
if (a->dim > b->dim)
|
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return 1;
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
@@ -889,6 +897,9 @@ vector_lt(PG_FUNCTION_ARGS)
|
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Vector *a = PG_GETARG_VECTOR_P(0);
|
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Vector *b = PG_GETARG_VECTOR_P(1);
|
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|
||||
/* TODO Remove in 0.7.0 */
|
||||
CheckDims(a, b);
|
||||
|
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PG_RETURN_BOOL(vector_cmp_internal(a, b) < 0);
|
||||
}
|
||||
|
||||
@@ -902,6 +913,9 @@ vector_le(PG_FUNCTION_ARGS)
|
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Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
/* TODO Remove in 0.7.0 */
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) <= 0);
|
||||
}
|
||||
|
||||
@@ -915,6 +929,9 @@ vector_eq(PG_FUNCTION_ARGS)
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
/* TODO Remove in 0.7.0 */
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) == 0);
|
||||
}
|
||||
|
||||
@@ -928,6 +945,9 @@ vector_ne(PG_FUNCTION_ARGS)
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
/* TODO Remove in 0.7.0 */
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) != 0);
|
||||
}
|
||||
|
||||
@@ -941,6 +961,9 @@ vector_ge(PG_FUNCTION_ARGS)
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
/* TODO Remove in 0.7.0 */
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) >= 0);
|
||||
}
|
||||
|
||||
@@ -954,6 +977,9 @@ vector_gt(PG_FUNCTION_ARGS)
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
|
||||
/* TODO Remove in 0.7.0 */
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) > 0);
|
||||
}
|
||||
|
||||
|
||||
@@ -24,6 +24,56 @@ SELECT '[1e37]'::vector * '[1e37]';
|
||||
ERROR: value out of range: overflow
|
||||
SELECT '[1e-37]'::vector * '[1e-37]';
|
||||
ERROR: value out of range: underflow
|
||||
SELECT '[1,2,3]'::vector = '[1,2,3]';
|
||||
?column?
|
||||
----------
|
||||
t
|
||||
(1 row)
|
||||
|
||||
SELECT '[1,2,3]'::vector = '[1,2]';
|
||||
ERROR: different vector dimensions 3 and 2
|
||||
SELECT vector_cmp('[1,2,3]', '[1,2,3]');
|
||||
vector_cmp
|
||||
------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT vector_cmp('[1,2,3]', '[0,0,0]');
|
||||
vector_cmp
|
||||
------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT vector_cmp('[0,0,0]', '[1,2,3]');
|
||||
vector_cmp
|
||||
------------
|
||||
-1
|
||||
(1 row)
|
||||
|
||||
SELECT vector_cmp('[1,2]', '[1,2,3]');
|
||||
vector_cmp
|
||||
------------
|
||||
-1
|
||||
(1 row)
|
||||
|
||||
SELECT vector_cmp('[1,2,3]', '[1,2]');
|
||||
vector_cmp
|
||||
------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT vector_cmp('[1,2]', '[2,3,4]');
|
||||
vector_cmp
|
||||
------------
|
||||
-1
|
||||
(1 row)
|
||||
|
||||
SELECT vector_cmp('[2,3]', '[1,2,3]');
|
||||
vector_cmp
|
||||
------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT vector_dims('[1,2,3]');
|
||||
vector_dims
|
||||
-------------
|
||||
|
||||
@@ -6,6 +6,17 @@ SELECT '[1,2,3]'::vector * '[4,5,6]';
|
||||
SELECT '[1e37]'::vector * '[1e37]';
|
||||
SELECT '[1e-37]'::vector * '[1e-37]';
|
||||
|
||||
SELECT '[1,2,3]'::vector = '[1,2,3]';
|
||||
SELECT '[1,2,3]'::vector = '[1,2]';
|
||||
|
||||
SELECT vector_cmp('[1,2,3]', '[1,2,3]');
|
||||
SELECT vector_cmp('[1,2,3]', '[0,0,0]');
|
||||
SELECT vector_cmp('[0,0,0]', '[1,2,3]');
|
||||
SELECT vector_cmp('[1,2]', '[1,2,3]');
|
||||
SELECT vector_cmp('[1,2,3]', '[1,2]');
|
||||
SELECT vector_cmp('[1,2]', '[2,3,4]');
|
||||
SELECT vector_cmp('[2,3]', '[1,2,3]');
|
||||
|
||||
SELECT vector_dims('[1,2,3]');
|
||||
|
||||
SELECT round(vector_norm('[1,1]')::numeric, 5);
|
||||
|
||||
Reference in New Issue
Block a user