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8
.github/workflows/build.yml
vendored
8
.github/workflows/build.yml
vendored
@@ -8,6 +8,8 @@ jobs:
|
||||
fail-fast: false
|
||||
matrix:
|
||||
include:
|
||||
- postgres: 17
|
||||
os: ubuntu-22.04
|
||||
- postgres: 16
|
||||
os: ubuntu-22.04
|
||||
- postgres: 15
|
||||
@@ -21,7 +23,7 @@ jobs:
|
||||
- postgres: 11
|
||||
os: ubuntu-20.04
|
||||
steps:
|
||||
- uses: actions/checkout@v3
|
||||
- uses: actions/checkout@v4
|
||||
- uses: ankane/setup-postgres@v1
|
||||
with:
|
||||
postgres-version: ${{ matrix.postgres }}
|
||||
@@ -43,7 +45,7 @@ jobs:
|
||||
runs-on: macos-latest
|
||||
if: ${{ !startsWith(github.ref_name, 'windows') }}
|
||||
steps:
|
||||
- uses: actions/checkout@v3
|
||||
- uses: actions/checkout@v4
|
||||
- uses: ankane/setup-postgres@v1
|
||||
with:
|
||||
postgres-version: 14
|
||||
@@ -65,7 +67,7 @@ jobs:
|
||||
runs-on: windows-latest
|
||||
if: ${{ !startsWith(github.ref_name, 'mac') }}
|
||||
steps:
|
||||
- uses: actions/checkout@v3
|
||||
- uses: actions/checkout@v4
|
||||
- uses: ankane/setup-postgres@v1
|
||||
with:
|
||||
postgres-version: 14
|
||||
|
||||
13
CHANGELOG.md
13
CHANGELOG.md
@@ -1,13 +1,22 @@
|
||||
## 0.6.0 (unreleased)
|
||||
|
||||
- Added support for sparse vectors
|
||||
|
||||
## 0.5.1 (2023-10-10)
|
||||
|
||||
- Improved performance of HNSW index builds
|
||||
- Added check for MVCC-compliant snapshot for index scans
|
||||
|
||||
## 0.5.0 (2023-08-28)
|
||||
|
||||
- Added HNSW index type
|
||||
- Added support for parallel index builds
|
||||
- Added support for parallel index builds for IVFFlat
|
||||
- Added `l1_distance` function
|
||||
- Added element-wise multiplication for vectors
|
||||
- Added `sum` aggregate
|
||||
- Improved performance of distance functions
|
||||
- Fixed out of range results for cosine distance
|
||||
- Fixed results for NULL and NaN distances
|
||||
- Fixed results for NULL and NaN distances for IVFFlat
|
||||
|
||||
## 0.4.4 (2023-06-12)
|
||||
|
||||
|
||||
@@ -2,7 +2,7 @@
|
||||
"name": "vector",
|
||||
"abstract": "Open-source vector similarity search for Postgres",
|
||||
"description": "Supports L2 distance, inner product, and cosine distance",
|
||||
"version": "0.5.0",
|
||||
"version": "0.5.1",
|
||||
"maintainer": [
|
||||
"Andrew Kane <andrew@ankane.org>"
|
||||
],
|
||||
@@ -20,7 +20,7 @@
|
||||
"vector": {
|
||||
"file": "sql/vector.sql",
|
||||
"docfile": "README.md",
|
||||
"version": "0.5.0",
|
||||
"version": "0.5.1",
|
||||
"abstract": "Open-source vector similarity search for Postgres"
|
||||
}
|
||||
},
|
||||
|
||||
8
Makefile
8
Makefile
@@ -1,14 +1,14 @@
|
||||
EXTENSION = vector
|
||||
EXTVERSION = 0.5.0
|
||||
EXTVERSION = 0.5.1
|
||||
|
||||
MODULE_big = vector
|
||||
DATA = $(wildcard sql/*--*.sql)
|
||||
OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/vector.o
|
||||
HEADERS = src/vector.h
|
||||
OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/svector.o src/vector.o
|
||||
HEADERS = src/svector.h src/vector.h
|
||||
|
||||
TESTS = $(wildcard test/sql/*.sql)
|
||||
REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS))
|
||||
REGRESS_OPTS = --inputdir=test --load-extension=vector
|
||||
REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)
|
||||
|
||||
OPTFLAGS = -march=native
|
||||
|
||||
|
||||
10
Makefile.win
10
Makefile.win
@@ -1,11 +1,11 @@
|
||||
EXTENSION = vector
|
||||
EXTVERSION = 0.5.0
|
||||
EXTVERSION = 0.5.1
|
||||
|
||||
OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\vector.obj
|
||||
HEADERS = src\vector.h
|
||||
OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\svector.obj src\vector.obj
|
||||
HEADERS = src\svector.h src\vector.h
|
||||
|
||||
REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged
|
||||
REGRESS_OPTS = --inputdir=test --load-extension=vector
|
||||
REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)
|
||||
|
||||
# For /arch flags
|
||||
# https://learn.microsoft.com/en-us/cpp/build/reference/arch-minimum-cpu-architecture
|
||||
@@ -56,7 +56,7 @@ install:
|
||||
copy $(EXTENSION).control "$(SHAREDIR)\extension"
|
||||
copy sql\$(EXTENSION)--*.sql "$(SHAREDIR)\extension"
|
||||
mkdir "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
|
||||
copy $(HEADERS) "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
|
||||
for %f in ($(HEADERS)) do copy %f "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
|
||||
|
||||
installcheck:
|
||||
"$(BINDIR)\pg_regress" --bindir="$(BINDIR)" $(REGRESS_OPTS) $(REGRESS)
|
||||
|
||||
129
README.md
129
README.md
@@ -18,7 +18,7 @@ Compile and install the extension (supports Postgres 11+)
|
||||
|
||||
```sh
|
||||
cd /tmp
|
||||
git clone --branch v0.5.0 https://github.com/pgvector/pgvector.git
|
||||
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
|
||||
cd pgvector
|
||||
make
|
||||
make install # may need sudo
|
||||
@@ -26,7 +26,7 @@ make install # may need sudo
|
||||
|
||||
See the [installation notes](#installation-notes) if you run into issues
|
||||
|
||||
You can also install it with [Docker](#docker), [Homebrew](#homebrew), [PGXN](#pgxn), [APT](#apt), [Yum](#yum), or [conda-forge](#conda-forge), and it comes preinstalled with [Postgres.app](#postgresapp) and many [hosted providers](#hosted-postgres)
|
||||
You can also install it with [Docker](#docker), [Homebrew](#homebrew), [PGXN](#pgxn), [APT](#apt), [Yum](#yum), or [conda-forge](#conda-forge), and it comes preinstalled with [Postgres.app](#postgresapp) and many [hosted providers](#hosted-postgres). There are also instructions for [GitHub Actions](https://github.com/pgvector/setup-pgvector).
|
||||
|
||||
## Getting Started
|
||||
|
||||
@@ -162,7 +162,7 @@ You can add an index to use approximate nearest neighbor search, which trades so
|
||||
Supported index types are:
|
||||
|
||||
- [IVFFlat](#ivfflat)
|
||||
- [HNSW](#hnsw) - *added in 0.5.0*
|
||||
- [HNSW](#hnsw) - added in 0.5.0
|
||||
|
||||
## IVFFlat
|
||||
|
||||
@@ -215,6 +215,23 @@ SELECT ...
|
||||
COMMIT;
|
||||
```
|
||||
|
||||
### Indexing Progress
|
||||
|
||||
Check [indexing progress](https://www.postgresql.org/docs/current/progress-reporting.html#CREATE-INDEX-PROGRESS-REPORTING) with Postgres 12+
|
||||
|
||||
```sql
|
||||
SELECT phase, round(100.0 * tuples_done / nullif(tuples_total, 0), 1) AS "%" FROM pg_stat_progress_create_index;
|
||||
```
|
||||
|
||||
The phases for IVFFlat are:
|
||||
|
||||
1. `initializing`
|
||||
2. `performing k-means`
|
||||
3. `assigning tuples`
|
||||
4. `loading tuples`
|
||||
|
||||
Note: `%` is only populated during the `loading tuples` phase
|
||||
|
||||
## HNSW
|
||||
|
||||
An HNSW index creates a multilayer graph. It has slower build times and uses more memory than IVFFlat, but has better query performance (in terms of speed-recall tradeoff). There’s no training step like IVFFlat, so the index can be created without any data in the table.
|
||||
@@ -271,22 +288,18 @@ SELECT ...
|
||||
COMMIT;
|
||||
```
|
||||
|
||||
## Indexing Progress
|
||||
### Indexing Progress
|
||||
|
||||
Check [indexing progress](https://www.postgresql.org/docs/current/progress-reporting.html#CREATE-INDEX-PROGRESS-REPORTING) with Postgres 12+
|
||||
|
||||
```sql
|
||||
SELECT phase, tuples_done, tuples_total FROM pg_stat_progress_create_index;
|
||||
SELECT phase, round(100.0 * blocks_done / nullif(blocks_total, 0), 1) AS "%" FROM pg_stat_progress_create_index;
|
||||
```
|
||||
|
||||
The phases are:
|
||||
The phases for HNSW are:
|
||||
|
||||
1. `initializing`
|
||||
2. `performing k-means` (IVFFlat only)
|
||||
3. `assigning tuples` (IVFFlat only)
|
||||
4. `loading tuples`
|
||||
|
||||
Note: `tuples_done` and `tuples_total` are only populated during the `loading tuples` phase
|
||||
2. `loading tuples`
|
||||
|
||||
## Filtering
|
||||
|
||||
@@ -317,13 +330,15 @@ CREATE TABLE items (embedding vector(3), category_id int) PARTITION BY LIST(cate
|
||||
|
||||
## Hybrid Search
|
||||
|
||||
Use together with Postgres [full-text search](https://www.postgresql.org/docs/current/textsearch-intro.html) for hybrid search ([Python example](https://github.com/pgvector/pgvector-python/blob/master/examples/hybrid_search.py)).
|
||||
Use together with Postgres [full-text search](https://www.postgresql.org/docs/current/textsearch-intro.html) for hybrid search.
|
||||
|
||||
```sql
|
||||
SELECT id, content FROM items, plainto_tsquery('hello search') query
|
||||
WHERE textsearch @@ query ORDER BY ts_rank_cd(textsearch, query) DESC LIMIT 5;
|
||||
```
|
||||
|
||||
You can use [Reciprocal Rank Fusion](https://github.com/pgvector/pgvector-python/blob/master/examples/hybrid_search_rrf.py) or a [cross-encoder](https://github.com/pgvector/pgvector-python/blob/master/examples/hybrid_search.py) to combine results.
|
||||
|
||||
## Performance
|
||||
|
||||
Use `EXPLAIN ANALYZE` to debug performance.
|
||||
@@ -354,12 +369,33 @@ To speed up queries with an IVFFlat index, increase the number of inverted lists
|
||||
CREATE INDEX ON items USING ivfflat (embedding vector_l2_ops) WITH (lists = 1000);
|
||||
```
|
||||
|
||||
## Sparse Vectors
|
||||
|
||||
Create a sparse vector column with 10 dimensions
|
||||
|
||||
```sql
|
||||
CREATE TABLE items (id bigserial PRIMARY KEY, embedding svector(10));
|
||||
```
|
||||
|
||||
Insert vectors
|
||||
|
||||
```sql
|
||||
INSERT INTO items (embedding) VALUES ('(0,1),(1,2),(2,3)|10|'), ('(0,4),(1,5),(4,6)|10|');
|
||||
```
|
||||
|
||||
Get the nearest neighbors by L2 distance
|
||||
|
||||
```sql
|
||||
SELECT * FROM items ORDER BY embedding <-> '(0,3),(1,1),(2,2)|10|' LIMIT 5;
|
||||
```
|
||||
|
||||
## Languages
|
||||
|
||||
Use pgvector from any language with a Postgres client. You can even generate and store vectors in one language and query them in another.
|
||||
|
||||
Language | Libraries / Examples
|
||||
--- | ---
|
||||
C | [pgvector-c](https://github.com/pgvector/pgvector-c)
|
||||
C++ | [pgvector-cpp](https://github.com/pgvector/pgvector-cpp)
|
||||
C# | [pgvector-dotnet](https://github.com/pgvector/pgvector-dotnet)
|
||||
Crystal | [pgvector-crystal](https://github.com/pgvector/pgvector-crystal)
|
||||
@@ -367,10 +403,11 @@ Dart | [pgvector-dart](https://github.com/pgvector/pgvector-dart)
|
||||
Elixir | [pgvector-elixir](https://github.com/pgvector/pgvector-elixir)
|
||||
Go | [pgvector-go](https://github.com/pgvector/pgvector-go)
|
||||
Haskell | [pgvector-haskell](https://github.com/pgvector/pgvector-haskell)
|
||||
Java, Scala | [pgvector-java](https://github.com/pgvector/pgvector-java)
|
||||
Java, Kotlin, Groovy, Scala | [pgvector-java](https://github.com/pgvector/pgvector-java)
|
||||
JavaScript, TypeScript | [pgvector-node](https://github.com/pgvector/pgvector-node)
|
||||
Julia | [pgvector-julia](https://github.com/pgvector/pgvector-julia)
|
||||
Lua | [pgvector-lua](https://github.com/pgvector/pgvector-lua)
|
||||
Node.js | [pgvector-node](https://github.com/pgvector/pgvector-node)
|
||||
Nim | [pgvector-nim](https://github.com/pgvector/pgvector-nim)
|
||||
Perl | [pgvector-perl](https://github.com/pgvector/pgvector-perl)
|
||||
PHP | [pgvector-php](https://github.com/pgvector/pgvector-php)
|
||||
Python | [pgvector-python](https://github.com/pgvector/pgvector-python)
|
||||
@@ -378,6 +415,7 @@ R | [pgvector-r](https://github.com/pgvector/pgvector-r)
|
||||
Ruby | [pgvector-ruby](https://github.com/pgvector/pgvector-ruby), [Neighbor](https://github.com/ankane/neighbor)
|
||||
Rust | [pgvector-rust](https://github.com/pgvector/pgvector-rust)
|
||||
Swift | [pgvector-swift](https://github.com/pgvector/pgvector-swift)
|
||||
Zig | [pgvector-zig](https://github.com/pgvector/pgvector-zig)
|
||||
|
||||
## Frequently Asked Questions
|
||||
|
||||
@@ -393,6 +431,55 @@ Yes, pgvector uses the write-ahead log (WAL), which allows for replication and p
|
||||
|
||||
You’ll need to use [dimensionality reduction](https://en.wikipedia.org/wiki/Dimensionality_reduction) at the moment.
|
||||
|
||||
#### Can I store vectors with different dimensions in the same column?
|
||||
|
||||
You can use `vector` as the type (instead of `vector(3)`).
|
||||
|
||||
```sql
|
||||
CREATE TABLE embeddings (model_id bigint, item_id bigint, embedding vector, PRIMARY KEY (model_id, item_id));
|
||||
```
|
||||
|
||||
However, you can only create indexes on rows with the same number of dimensions (using [expression](https://www.postgresql.org/docs/current/indexes-expressional.html) and [partial](https://www.postgresql.org/docs/current/indexes-partial.html) indexing):
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON embeddings USING hnsw ((embedding::vector(3)) vector_l2_ops) WHERE (model_id = 123);
|
||||
```
|
||||
|
||||
and query with:
|
||||
|
||||
```sql
|
||||
SELECT * FROM embeddings WHERE model_id = 123 ORDER BY embedding::vector(3) <-> '[3,1,2]' LIMIT 5;
|
||||
```
|
||||
|
||||
#### Can I store vectors with more precision?
|
||||
|
||||
You can use the `double precision[]` or `numeric[]` type to store vectors with more precision.
|
||||
|
||||
```sql
|
||||
CREATE TABLE items (id bigserial PRIMARY KEY, embedding double precision[]);
|
||||
|
||||
-- use {} instead of [] for Postgres arrays
|
||||
INSERT INTO items (embedding) VALUES ('{1,2,3}'), ('{4,5,6}');
|
||||
```
|
||||
|
||||
Optionally, add a [check constraint](https://www.postgresql.org/docs/current/ddl-constraints.html) to ensure data can be converted to the `vector` type and has the expected dimensions.
|
||||
|
||||
```sql
|
||||
ALTER TABLE items ADD CHECK (vector_dims(embedding::vector) = 3);
|
||||
```
|
||||
|
||||
Use [expression indexing](https://www.postgresql.org/docs/current/indexes-expressional.html) to index (at a lower precision):
|
||||
|
||||
```sql
|
||||
CREATE INDEX ON items USING hnsw ((embedding::vector(3)) vector_l2_ops);
|
||||
```
|
||||
|
||||
and query with:
|
||||
|
||||
```sql
|
||||
SELECT * FROM items ORDER BY embedding::vector(3) <-> '[3,1,2]' LIMIT 5;
|
||||
```
|
||||
|
||||
## Troubleshooting
|
||||
|
||||
#### Why isn’t a query using an index?
|
||||
@@ -406,6 +493,8 @@ SELECT ...
|
||||
COMMIT;
|
||||
```
|
||||
|
||||
Also, if the table is small, a table scan may be faster.
|
||||
|
||||
#### Why isn’t a query using a parallel table scan?
|
||||
|
||||
The planner doesn’t consider [out-of-line storage](https://www.postgresql.org/docs/current/storage-toast.html) in cost estimates, which can make a serial scan look cheaper. You can reduce the cost of a parallel scan for a query with:
|
||||
@@ -509,7 +598,7 @@ Then use `nmake` to build:
|
||||
|
||||
```cmd
|
||||
set "PGROOT=C:\Program Files\PostgreSQL\15"
|
||||
git clone --branch v0.5.0 https://github.com/pgvector/pgvector.git
|
||||
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
|
||||
cd pgvector
|
||||
nmake /F Makefile.win
|
||||
nmake /F Makefile.win install
|
||||
@@ -530,7 +619,7 @@ This adds pgvector to the [Postgres image](https://hub.docker.com/_/postgres) (r
|
||||
You can also build the image manually:
|
||||
|
||||
```sh
|
||||
git clone --branch v0.5.0 https://github.com/pgvector/pgvector.git
|
||||
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
|
||||
cd pgvector
|
||||
docker build --build-arg PG_MAJOR=15 -t myuser/pgvector .
|
||||
```
|
||||
@@ -595,12 +684,18 @@ pgvector is available on [these providers](https://github.com/pgvector/pgvector/
|
||||
|
||||
## Upgrading
|
||||
|
||||
Install the latest version and run:
|
||||
[Install](#installation) the latest version (use the same method as the original installation). Then in each database you want to upgrade, run:
|
||||
|
||||
```sql
|
||||
ALTER EXTENSION vector UPDATE;
|
||||
```
|
||||
|
||||
You can check the version in the current database with:
|
||||
|
||||
```sql
|
||||
SELECT extversion FROM pg_extension WHERE extname = 'vector';
|
||||
```
|
||||
|
||||
## Upgrade Notes
|
||||
|
||||
### 0.4.0
|
||||
|
||||
2
sql/vector--0.5.0--0.5.1.sql
Normal file
2
sql/vector--0.5.0--0.5.1.sql
Normal file
@@ -0,0 +1,2 @@
|
||||
-- complain if script is sourced in psql, rather than via CREATE EXTENSION
|
||||
\echo Use "ALTER EXTENSION vector UPDATE TO '0.5.1'" to load this file. \quit
|
||||
79
sql/vector--0.5.1--0.6.0.sql
Normal file
79
sql/vector--0.5.1--0.6.0.sql
Normal file
@@ -0,0 +1,79 @@
|
||||
-- complain if script is sourced in psql, rather than via CREATE EXTENSION
|
||||
\echo Use "ALTER EXTENSION vector UPDATE TO '0.6.0'" to load this file. \quit
|
||||
|
||||
CREATE TYPE svector;
|
||||
|
||||
CREATE FUNCTION svector_in(cstring, oid, integer) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_out(svector) RETURNS cstring
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_typmod_in(cstring[]) RETURNS integer
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_recv(internal, oid, integer) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_send(svector) RETURNS bytea
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE TYPE svector (
|
||||
INPUT = svector_in,
|
||||
OUTPUT = svector_out,
|
||||
TYPMOD_IN = svector_typmod_in,
|
||||
RECEIVE = svector_recv,
|
||||
SEND = svector_send,
|
||||
STORAGE = external
|
||||
);
|
||||
|
||||
CREATE FUNCTION l2_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION inner_product(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION cosine_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION jaccard_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_jaccard_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_l2_squared_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_negative_inner_product(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector(svector, integer, boolean) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION vector_to_svector(vector, integer, boolean) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_to_vector(svector, integer, boolean) RETURNS vector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE CAST (svector AS svector)
|
||||
WITH FUNCTION svector(svector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
CREATE CAST (svector AS vector)
|
||||
WITH FUNCTION svector_to_vector(svector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
CREATE CAST (vector AS svector)
|
||||
WITH FUNCTION vector_to_svector(vector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
CREATE OPERATOR <-> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = l2_distance,
|
||||
COMMUTATOR = '<->'
|
||||
);
|
||||
|
||||
CREATE OPERATOR <#> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = svector_negative_inner_product,
|
||||
COMMUTATOR = '<#>'
|
||||
);
|
||||
|
||||
CREATE OPERATOR <=> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = cosine_distance,
|
||||
COMMUTATOR = '<=>'
|
||||
);
|
||||
@@ -290,3 +290,92 @@ CREATE OPERATOR CLASS vector_cosine_ops
|
||||
OPERATOR 1 <=> (vector, vector) FOR ORDER BY float_ops,
|
||||
FUNCTION 1 vector_negative_inner_product(vector, vector),
|
||||
FUNCTION 2 vector_norm(vector);
|
||||
|
||||
--- svector type
|
||||
|
||||
CREATE TYPE svector;
|
||||
|
||||
CREATE FUNCTION svector_in(cstring, oid, integer) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_out(svector) RETURNS cstring
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_typmod_in(cstring[]) RETURNS integer
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_recv(internal, oid, integer) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_send(svector) RETURNS bytea
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE TYPE svector (
|
||||
INPUT = svector_in,
|
||||
OUTPUT = svector_out,
|
||||
TYPMOD_IN = svector_typmod_in,
|
||||
RECEIVE = svector_recv,
|
||||
SEND = svector_send,
|
||||
STORAGE = external
|
||||
);
|
||||
|
||||
-- svector functions
|
||||
|
||||
CREATE FUNCTION l2_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION inner_product(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION cosine_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION jaccard_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME', 'svector_jaccard_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
-- svector private functions
|
||||
|
||||
CREATE FUNCTION svector_l2_squared_distance(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_negative_inner_product(svector, svector) RETURNS float8
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
-- svector cast functions
|
||||
|
||||
CREATE FUNCTION svector(svector, integer, boolean) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION vector_to_svector(vector, integer, boolean) RETURNS svector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_to_vector(svector, integer, boolean) RETURNS vector
|
||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
-- svector casts
|
||||
|
||||
CREATE CAST (svector AS svector)
|
||||
WITH FUNCTION svector(svector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
CREATE CAST (svector AS vector)
|
||||
WITH FUNCTION svector_to_vector(svector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
CREATE CAST (vector AS svector)
|
||||
WITH FUNCTION vector_to_svector(vector, integer, boolean) AS IMPLICIT;
|
||||
|
||||
-- svector operators
|
||||
|
||||
CREATE OPERATOR <-> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = l2_distance,
|
||||
COMMUTATOR = '<->'
|
||||
);
|
||||
|
||||
CREATE OPERATOR <#> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = svector_negative_inner_product,
|
||||
COMMUTATOR = '<#>'
|
||||
);
|
||||
|
||||
CREATE OPERATOR <=> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = cosine_distance,
|
||||
COMMUTATOR = '<=>'
|
||||
);
|
||||
|
||||
@@ -91,7 +91,7 @@ hnswcostestimate(PlannerInfo *root, IndexPath *path, double loop_count,
|
||||
MemSet(&costs, 0, sizeof(costs));
|
||||
|
||||
index = index_open(path->indexinfo->indexoid, NoLock);
|
||||
m = HnswGetM(index);
|
||||
HnswGetMetaPageInfo(index, &m, NULL);
|
||||
index_close(index, NoLock);
|
||||
|
||||
/* Approximate entry level */
|
||||
@@ -196,7 +196,7 @@ hnswhandler(PG_FUNCTION_ARGS)
|
||||
amroutine->aminsert = hnswinsert;
|
||||
amroutine->ambulkdelete = hnswbulkdelete;
|
||||
amroutine->amvacuumcleanup = hnswvacuumcleanup;
|
||||
amroutine->amcanreturn = NULL; /* tuple not included in heapsort */
|
||||
amroutine->amcanreturn = NULL;
|
||||
amroutine->amcostestimate = hnswcostestimate;
|
||||
amroutine->amoptions = hnswoptions;
|
||||
amroutine->amproperty = NULL; /* TODO AMPROP_DISTANCE_ORDERABLE */
|
||||
|
||||
12
src/hnsw.h
12
src/hnsw.h
@@ -57,6 +57,8 @@
|
||||
/* PROGRESS_CREATEIDX_SUBPHASE_INITIALIZE is 1 */
|
||||
#define PROGRESS_HNSW_PHASE_LOAD 2
|
||||
|
||||
#define HNSW_MAX_SIZE (BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - sizeof(ItemIdData))
|
||||
|
||||
#define HNSW_ELEMENT_TUPLE_SIZE(_dim) MAXALIGN(offsetof(HnswElementTupleData, vec) + VECTOR_SIZE(_dim))
|
||||
#define HNSW_NEIGHBOR_TUPLE_SIZE(level, m) MAXALIGN(offsetof(HnswNeighborTupleData, indextids) + ((level) + 2) * (m) * sizeof(ItemPointerData))
|
||||
|
||||
@@ -110,11 +112,13 @@ typedef struct HnswCandidate
|
||||
{
|
||||
HnswElement element;
|
||||
float distance;
|
||||
bool closer;
|
||||
} HnswCandidate;
|
||||
|
||||
typedef struct HnswNeighborArray
|
||||
{
|
||||
int length;
|
||||
bool closerSet;
|
||||
HnswCandidate *items;
|
||||
} HnswNeighborArray;
|
||||
|
||||
@@ -218,7 +222,6 @@ typedef HnswNeighborTupleData * HnswNeighborTuple;
|
||||
typedef struct HnswScanOpaqueData
|
||||
{
|
||||
bool first;
|
||||
Buffer buf;
|
||||
List *w;
|
||||
MemoryContext tmpCtx;
|
||||
|
||||
@@ -259,15 +262,16 @@ typedef struct HnswVacuumState
|
||||
/* Methods */
|
||||
int HnswGetM(Relation index);
|
||||
int HnswGetEfConstruction(Relation index);
|
||||
FmgrInfo *HnswOptionalProcInfo(Relation rel, uint16 procnum);
|
||||
FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum);
|
||||
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
||||
void HnswCommitBuffer(Buffer buf, GenericXLogState *state);
|
||||
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
|
||||
void HnswInitPage(Buffer buf, Page page);
|
||||
void HnswInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogState **state);
|
||||
void HnswInit(void);
|
||||
List *HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, bool inserting, HnswElement skipElement);
|
||||
List *HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
|
||||
HnswElement HnswGetEntryPoint(Relation index);
|
||||
void HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint);
|
||||
HnswElement HnswInitElement(ItemPointer tid, int m, double ml, int maxLevel);
|
||||
void HnswFreeElement(HnswElement element);
|
||||
HnswElement HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno);
|
||||
@@ -284,7 +288,7 @@ void HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool
|
||||
void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
||||
void HnswSetElementTuple(HnswElementTuple etup, HnswElement element);
|
||||
void HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
|
||||
void HnswLoadNeighbors(HnswElement element, Relation index);
|
||||
void HnswLoadNeighbors(HnswElement element, Relation index, int m);
|
||||
|
||||
/* Index access methods */
|
||||
IndexBuildResult *hnswbuild(Relation heap, Relation index, IndexInfo *indexInfo);
|
||||
|
||||
@@ -81,7 +81,6 @@ HnswBuildAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **
|
||||
HnswPageGetOpaque(*page)->nextblkno = BufferGetBlockNumber(newbuf);
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(*buf);
|
||||
GenericXLogFinish(*state);
|
||||
UnlockReleaseBuffer(*buf);
|
||||
|
||||
@@ -118,12 +117,12 @@ CreateElementPages(HnswBuildState * buildstate)
|
||||
ListCell *lc;
|
||||
|
||||
/* Calculate sizes */
|
||||
maxSize = BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData));
|
||||
maxSize = HNSW_MAX_SIZE;
|
||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions);
|
||||
|
||||
/* Allocate once */
|
||||
etup = palloc0(etupSize);
|
||||
ntup = palloc0(maxSize);
|
||||
ntup = palloc0(BLCKSZ);
|
||||
|
||||
/* Prepare first page */
|
||||
buf = HnswNewBuffer(index, forkNum);
|
||||
@@ -179,7 +178,6 @@ CreateElementPages(HnswBuildState * buildstate)
|
||||
insertPage = BufferGetBlockNumber(buf);
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
|
||||
@@ -227,7 +225,6 @@ CreateNeighborPages(HnswBuildState * buildstate)
|
||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
}
|
||||
|
||||
@@ -135,7 +135,7 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions);
|
||||
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m);
|
||||
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
|
||||
maxSize = BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData));
|
||||
maxSize = HNSW_MAX_SIZE;
|
||||
minCombinedSize = etupSize + HNSW_NEIGHBOR_TUPLE_SIZE(0, m) + sizeof(ItemIdData);
|
||||
|
||||
/* Prepare element tuple */
|
||||
@@ -202,8 +202,6 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
HnswInsertAppendPage(index, &newbuf, &newpage, state, page);
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(newbuf);
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
|
||||
/* Unlock previous buffer */
|
||||
@@ -270,9 +268,6 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
}
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(buf);
|
||||
if (nbuf != buf)
|
||||
MarkBufferDirty(nbuf);
|
||||
GenericXLogFinish(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
if (nbuf != buf)
|
||||
@@ -329,7 +324,7 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
||||
|
||||
/* Get latest neighbors since they may have changed */
|
||||
/* Do not lock yet since selecting neighbors can take time */
|
||||
HnswLoadNeighbors(hc->element, index);
|
||||
HnswLoadNeighbors(hc->element, index, m);
|
||||
|
||||
/*
|
||||
* Could improve performance for vacuuming by checking neighbors
|
||||
@@ -391,7 +386,6 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
}
|
||||
else
|
||||
@@ -445,7 +439,6 @@ HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
|
||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
|
||||
@@ -492,9 +485,8 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
||||
FmgrInfo *normprocinfo;
|
||||
HnswElement entryPoint;
|
||||
HnswElement element;
|
||||
int m = HnswGetM(index);
|
||||
int m;
|
||||
int efConstruction = HnswGetEfConstruction(index);
|
||||
double ml = HnswGetMl(m);
|
||||
FmgrInfo *procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||
Oid collation = index->rd_indcollation[0];
|
||||
HnswElement dup;
|
||||
@@ -511,10 +503,6 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
||||
return false;
|
||||
}
|
||||
|
||||
/* Create an element */
|
||||
element = HnswInitElement(heap_tid, m, ml, HnswGetMaxLevel(m));
|
||||
element->vec = DatumGetVector(value);
|
||||
|
||||
/*
|
||||
* Get a shared lock. This allows vacuum to ensure no in-flight inserts
|
||||
* before repairing graph. Use a page lock so it does not interfere with
|
||||
@@ -522,8 +510,12 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
||||
*/
|
||||
LockPage(index, HNSW_UPDATE_LOCK, lockmode);
|
||||
|
||||
/* Get entry point */
|
||||
entryPoint = HnswGetEntryPoint(index);
|
||||
/* Get m and entry point */
|
||||
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
||||
|
||||
/* Create an element */
|
||||
element = HnswInitElement(heap_tid, m, HnswGetMl(m), HnswGetMaxLevel(m));
|
||||
element->vec = DatumGetVector(value);
|
||||
|
||||
/* Prevent concurrent inserts when likely updating entry point */
|
||||
if (entryPoint == NULL || element->level > entryPoint->level)
|
||||
|
||||
@@ -19,7 +19,11 @@ GetScanItems(IndexScanDesc scan, Datum q)
|
||||
Oid collation = so->collation;
|
||||
List *ep;
|
||||
List *w;
|
||||
HnswElement entryPoint = HnswGetEntryPoint(index);
|
||||
int m;
|
||||
HnswElement entryPoint;
|
||||
|
||||
/* Get m and entry point */
|
||||
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
||||
|
||||
if (entryPoint == NULL)
|
||||
return NIL;
|
||||
@@ -28,11 +32,11 @@ GetScanItems(IndexScanDesc scan, Datum q)
|
||||
|
||||
for (int lc = entryPoint->level; lc >= 1; lc--)
|
||||
{
|
||||
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, false, NULL);
|
||||
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, m, false, NULL);
|
||||
ep = w;
|
||||
}
|
||||
|
||||
return HnswSearchLayer(q, ep, hnsw_ef_search, 0, index, procinfo, collation, false, NULL);
|
||||
return HnswSearchLayer(q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -58,6 +62,33 @@ GetDimensions(Relation index)
|
||||
return dimensions;
|
||||
}
|
||||
|
||||
/*
|
||||
* Get scan value
|
||||
*/
|
||||
static Datum
|
||||
GetScanValue(IndexScanDesc scan)
|
||||
{
|
||||
HnswScanOpaque so = (HnswScanOpaque) scan->opaque;
|
||||
Datum value;
|
||||
|
||||
if (scan->orderByData->sk_flags & SK_ISNULL)
|
||||
value = PointerGetDatum(InitVector(GetDimensions(scan->indexRelation)));
|
||||
else
|
||||
{
|
||||
value = scan->orderByData->sk_argument;
|
||||
|
||||
/* Value should not be compressed or toasted */
|
||||
Assert(!VARATT_IS_COMPRESSED(DatumGetPointer(value)));
|
||||
Assert(!VARATT_IS_EXTENDED(DatumGetPointer(value)));
|
||||
|
||||
/* Fine if normalization fails */
|
||||
if (so->normprocinfo != NULL)
|
||||
HnswNormValue(so->normprocinfo, so->collation, &value, NULL);
|
||||
}
|
||||
|
||||
return value;
|
||||
}
|
||||
|
||||
/*
|
||||
* Prepare for an index scan
|
||||
*/
|
||||
@@ -70,7 +101,6 @@ hnswbeginscan(Relation index, int nkeys, int norderbys)
|
||||
scan = RelationGetIndexScan(index, nkeys, norderbys);
|
||||
|
||||
so = (HnswScanOpaque) palloc(sizeof(HnswScanOpaqueData));
|
||||
so->buf = InvalidBuffer;
|
||||
so->first = true;
|
||||
so->tmpCtx = AllocSetContextCreate(CurrentMemoryContext,
|
||||
"Hnsw scan temporary context",
|
||||
@@ -130,20 +160,13 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
|
||||
if (scan->orderByData == NULL)
|
||||
elog(ERROR, "cannot scan hnsw index without order");
|
||||
|
||||
if (scan->orderByData->sk_flags & SK_ISNULL)
|
||||
value = PointerGetDatum(InitVector(GetDimensions(scan->indexRelation)));
|
||||
else
|
||||
{
|
||||
value = scan->orderByData->sk_argument;
|
||||
/* Requires MVCC-compliant snapshot as not able to maintain a pin */
|
||||
/* https://www.postgresql.org/docs/current/index-locking.html */
|
||||
if (!IsMVCCSnapshot(scan->xs_snapshot))
|
||||
elog(ERROR, "non-MVCC snapshots are not supported with hnsw");
|
||||
|
||||
/* Value should not be compressed or toasted */
|
||||
Assert(!VARATT_IS_COMPRESSED(DatumGetPointer(value)));
|
||||
Assert(!VARATT_IS_EXTENDED(DatumGetPointer(value)));
|
||||
|
||||
/* Fine if normalization fails */
|
||||
if (so->normprocinfo != NULL)
|
||||
HnswNormValue(so->normprocinfo, so->collation, &value, NULL);
|
||||
}
|
||||
/* Get scan value */
|
||||
value = GetScanValue(scan);
|
||||
|
||||
/*
|
||||
* Get a shared lock. This allows vacuum to ensure no in-flight scans
|
||||
@@ -162,40 +185,27 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
|
||||
while (list_length(so->w) > 0)
|
||||
{
|
||||
HnswCandidate *hc = llast(so->w);
|
||||
ItemPointer tid;
|
||||
BlockNumber indexblkno;
|
||||
ItemPointer heaptid;
|
||||
|
||||
/* Move to next element if no valid heap tids */
|
||||
/* Move to next element if no valid heap TIDs */
|
||||
if (list_length(hc->element->heaptids) == 0)
|
||||
{
|
||||
so->w = list_delete_last(so->w);
|
||||
continue;
|
||||
}
|
||||
|
||||
tid = llast(hc->element->heaptids);
|
||||
indexblkno = hc->element->blkno;
|
||||
heaptid = llast(hc->element->heaptids);
|
||||
|
||||
hc->element->heaptids = list_delete_last(hc->element->heaptids);
|
||||
|
||||
MemoryContextSwitchTo(oldCtx);
|
||||
|
||||
#if PG_VERSION_NUM >= 120000
|
||||
scan->xs_heaptid = *tid;
|
||||
scan->xs_heaptid = *heaptid;
|
||||
#else
|
||||
scan->xs_ctup.t_self = *tid;
|
||||
scan->xs_ctup.t_self = *heaptid;
|
||||
#endif
|
||||
|
||||
if (BufferIsValid(so->buf))
|
||||
ReleaseBuffer(so->buf);
|
||||
|
||||
/*
|
||||
* An index scan must maintain a pin on the index page holding the
|
||||
* item last returned by amgettuple
|
||||
*
|
||||
* https://www.postgresql.org/docs/current/index-locking.html
|
||||
*/
|
||||
so->buf = ReadBuffer(scan->indexRelation, indexblkno);
|
||||
|
||||
scan->xs_recheckorderby = false;
|
||||
return true;
|
||||
}
|
||||
@@ -212,10 +222,6 @@ hnswendscan(IndexScanDesc scan)
|
||||
{
|
||||
HnswScanOpaque so = (HnswScanOpaque) scan->opaque;
|
||||
|
||||
/* Release pin */
|
||||
if (BufferIsValid(so->buf))
|
||||
ReleaseBuffer(so->buf);
|
||||
|
||||
MemoryContextDelete(so->tmpCtx);
|
||||
|
||||
pfree(so);
|
||||
|
||||
182
src/hnswutils.c
182
src/hnswutils.c
@@ -38,12 +38,12 @@ HnswGetEfConstruction(Relation index)
|
||||
* Get proc
|
||||
*/
|
||||
FmgrInfo *
|
||||
HnswOptionalProcInfo(Relation rel, uint16 procnum)
|
||||
HnswOptionalProcInfo(Relation index, uint16 procnum)
|
||||
{
|
||||
if (!OidIsValid(index_getprocid(rel, 1, procnum)))
|
||||
if (!OidIsValid(index_getprocid(index, 1, procnum)))
|
||||
return NULL;
|
||||
|
||||
return index_getprocinfo(rel, 1, procnum);
|
||||
return index_getprocinfo(index, 1, procnum);
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -117,7 +117,6 @@ HnswInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogState *
|
||||
void
|
||||
HnswCommitBuffer(Buffer buf, GenericXLogState *state)
|
||||
{
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
}
|
||||
@@ -140,9 +139,21 @@ HnswInitNeighbors(HnswElement element, int m)
|
||||
a = &element->neighbors[lc];
|
||||
a->length = 0;
|
||||
a->items = palloc(sizeof(HnswCandidate) * lm);
|
||||
a->closerSet = false;
|
||||
}
|
||||
}
|
||||
|
||||
/*
|
||||
* Free neighbors
|
||||
*/
|
||||
static void
|
||||
HnswFreeNeighbors(HnswElement element)
|
||||
{
|
||||
for (int lc = 0; lc <= element->level; lc++)
|
||||
pfree(element->neighbors[lc].items);
|
||||
pfree(element->neighbors);
|
||||
}
|
||||
|
||||
/*
|
||||
* Allocate an element
|
||||
*/
|
||||
@@ -174,10 +185,8 @@ HnswInitElement(ItemPointer heaptid, int m, double ml, int maxLevel)
|
||||
void
|
||||
HnswFreeElement(HnswElement element)
|
||||
{
|
||||
HnswFreeNeighbors(element);
|
||||
list_free_deep(element->heaptids);
|
||||
for (int lc = 0; lc <= element->level; lc++)
|
||||
pfree(element->neighbors[lc].items);
|
||||
pfree(element->neighbors);
|
||||
pfree(element->vec);
|
||||
pfree(element);
|
||||
}
|
||||
@@ -210,25 +219,43 @@ HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno)
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the entry point
|
||||
* Get the metapage info
|
||||
*/
|
||||
HnswElement
|
||||
HnswGetEntryPoint(Relation index)
|
||||
void
|
||||
HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint)
|
||||
{
|
||||
Buffer buf;
|
||||
Page page;
|
||||
HnswMetaPage metap;
|
||||
HnswElement entryPoint = NULL;
|
||||
|
||||
buf = ReadBuffer(index, HNSW_METAPAGE_BLKNO);
|
||||
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
||||
page = BufferGetPage(buf);
|
||||
metap = HnswPageGetMeta(page);
|
||||
|
||||
if (BlockNumberIsValid(metap->entryBlkno))
|
||||
entryPoint = HnswInitElementFromBlock(metap->entryBlkno, metap->entryOffno);
|
||||
if (m != NULL)
|
||||
*m = metap->m;
|
||||
|
||||
if (entryPoint != NULL)
|
||||
{
|
||||
if (BlockNumberIsValid(metap->entryBlkno))
|
||||
*entryPoint = HnswInitElementFromBlock(metap->entryBlkno, metap->entryOffno);
|
||||
else
|
||||
*entryPoint = NULL;
|
||||
}
|
||||
|
||||
UnlockReleaseBuffer(buf);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the entry point
|
||||
*/
|
||||
HnswElement
|
||||
HnswGetEntryPoint(Relation index)
|
||||
{
|
||||
HnswElement entryPoint;
|
||||
|
||||
HnswGetMetaPageInfo(index, NULL, &entryPoint);
|
||||
|
||||
return entryPoint;
|
||||
}
|
||||
@@ -337,10 +364,9 @@ HnswSetNeighborTuple(HnswNeighborTuple ntup, HnswElement e, int m)
|
||||
* Load neighbors from page
|
||||
*/
|
||||
static void
|
||||
LoadNeighborsFromPage(HnswElement element, Relation index, Page page)
|
||||
LoadNeighborsFromPage(HnswElement element, Relation index, Page page, int m)
|
||||
{
|
||||
HnswNeighborTuple ntup = (HnswNeighborTuple) PageGetItem(page, PageGetItemId(page, element->neighborOffno));
|
||||
int m = HnswGetM(index);
|
||||
int neighborCount = (element->level + 2) * m;
|
||||
|
||||
Assert(HnswIsNeighborTuple(ntup));
|
||||
@@ -381,7 +407,7 @@ LoadNeighborsFromPage(HnswElement element, Relation index, Page page)
|
||||
* Load neighbors
|
||||
*/
|
||||
void
|
||||
HnswLoadNeighbors(HnswElement element, Relation index)
|
||||
HnswLoadNeighbors(HnswElement element, Relation index, int m)
|
||||
{
|
||||
Buffer buf;
|
||||
Page page;
|
||||
@@ -390,7 +416,7 @@ HnswLoadNeighbors(HnswElement element, Relation index)
|
||||
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
||||
page = BufferGetPage(buf);
|
||||
|
||||
LoadNeighborsFromPage(element, index, page);
|
||||
LoadNeighborsFromPage(element, index, page, m);
|
||||
|
||||
UnlockReleaseBuffer(buf);
|
||||
}
|
||||
@@ -543,7 +569,7 @@ AddToVisited(HTAB *v, HnswCandidate * hc, Relation index, bool *found)
|
||||
* Algorithm 2 from paper
|
||||
*/
|
||||
List *
|
||||
HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, bool inserting, HnswElement skipElement)
|
||||
HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement)
|
||||
{
|
||||
ListCell *lc2;
|
||||
|
||||
@@ -598,7 +624,7 @@ HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *pro
|
||||
break;
|
||||
|
||||
if (c->element->neighbors == NULL)
|
||||
HnswLoadNeighbors(c->element, index);
|
||||
HnswLoadNeighbors(c->element, index, m);
|
||||
|
||||
/* Get the neighborhood at layer lc */
|
||||
neighborhood = &c->element->neighbors[lc];
|
||||
@@ -667,6 +693,34 @@ HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *pro
|
||||
return w;
|
||||
}
|
||||
|
||||
/*
|
||||
* Compare candidate distances
|
||||
*/
|
||||
static int
|
||||
#if PG_VERSION_NUM >= 130000
|
||||
CompareCandidateDistances(const ListCell *a, const ListCell *b)
|
||||
#else
|
||||
CompareCandidateDistances(const void *a, const void *b)
|
||||
#endif
|
||||
{
|
||||
HnswCandidate *hca = lfirst((ListCell *) a);
|
||||
HnswCandidate *hcb = lfirst((ListCell *) b);
|
||||
|
||||
if (hca->distance < hcb->distance)
|
||||
return 1;
|
||||
|
||||
if (hca->distance > hcb->distance)
|
||||
return -1;
|
||||
|
||||
if (hca->element < hcb->element)
|
||||
return 1;
|
||||
|
||||
if (hca->element > hcb->element)
|
||||
return -1;
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
/*
|
||||
* Calculate the distance between elements
|
||||
*/
|
||||
@@ -723,33 +777,77 @@ CheckElementCloser(HnswCandidate * e, List *r, int lc, FmgrInfo *procinfo, Oid c
|
||||
* Algorithm 4 from paper
|
||||
*/
|
||||
static List *
|
||||
SelectNeighbors(List *c, int m, int lc, FmgrInfo *procinfo, Oid collation, HnswCandidate * *pruned)
|
||||
SelectNeighbors(List *c, int m, int lc, FmgrInfo *procinfo, Oid collation, HnswElement e2, HnswCandidate * newCandidate, HnswCandidate * *pruned, bool sortCandidates)
|
||||
{
|
||||
List *r = NIL;
|
||||
List *w = list_copy(c);
|
||||
pairingheap *wd;
|
||||
bool mustCalculate = !e2->neighbors[lc].closerSet;
|
||||
List *added = NIL;
|
||||
bool removedAny = false;
|
||||
|
||||
if (list_length(w) <= m)
|
||||
return w;
|
||||
|
||||
wd = pairingheap_allocate(CompareNearestCandidates, NULL);
|
||||
|
||||
/* Ensure order of candidates is deterministic for closer caching */
|
||||
if (sortCandidates)
|
||||
list_sort(w, CompareCandidateDistances);
|
||||
|
||||
while (list_length(w) > 0 && list_length(r) < m)
|
||||
{
|
||||
/* Assumes w is already ordered desc */
|
||||
HnswCandidate *e = llast(w);
|
||||
bool closer;
|
||||
|
||||
w = list_delete_last(w);
|
||||
|
||||
closer = CheckElementCloser(e, r, lc, procinfo, collation);
|
||||
/* Use previous state of r and wd to skip work when possible */
|
||||
if (mustCalculate)
|
||||
e->closer = CheckElementCloser(e, r, lc, procinfo, collation);
|
||||
else if (list_length(added) > 0)
|
||||
{
|
||||
/*
|
||||
* If the current candidate was closer, we only need to compare it
|
||||
* with the other candidates that we have added.
|
||||
*/
|
||||
if (e->closer)
|
||||
{
|
||||
e->closer = CheckElementCloser(e, added, lc, procinfo, collation);
|
||||
|
||||
if (closer)
|
||||
if (!e->closer)
|
||||
removedAny = true;
|
||||
}
|
||||
else
|
||||
{
|
||||
/*
|
||||
* If we have removed any candidates from closer, a candidate
|
||||
* that was not closer earlier might now be.
|
||||
*/
|
||||
if (removedAny)
|
||||
{
|
||||
e->closer = CheckElementCloser(e, r, lc, procinfo, collation);
|
||||
if (e->closer)
|
||||
added = lappend(added, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
else if (e == newCandidate)
|
||||
{
|
||||
e->closer = CheckElementCloser(e, r, lc, procinfo, collation);
|
||||
if (e->closer)
|
||||
added = lappend(added, e);
|
||||
}
|
||||
|
||||
if (e->closer)
|
||||
r = lappend(r, e);
|
||||
else
|
||||
pairingheap_add(wd, &(CreatePairingHeapNode(e)->ph_node));
|
||||
}
|
||||
|
||||
/* Cached value can only be used in future if sorted deterministically */
|
||||
e2->neighbors[lc].closerSet = sortCandidates;
|
||||
|
||||
/* Keep pruned connections */
|
||||
while (!pairingheap_is_empty(wd) && list_length(r) < m)
|
||||
r = lappend(r, ((HnswPairingHeapNode *) pairingheap_remove_first(wd))->inner);
|
||||
@@ -803,28 +901,6 @@ AddConnections(HnswElement element, List *neighbors, int m, int lc)
|
||||
a->items[a->length++] = *((HnswCandidate *) lfirst(lc2));
|
||||
}
|
||||
|
||||
/*
|
||||
* Compare candidate distances
|
||||
*/
|
||||
static int
|
||||
#if PG_VERSION_NUM >= 130000
|
||||
CompareCandidateDistances(const ListCell *a, const ListCell *b)
|
||||
#else
|
||||
CompareCandidateDistances(const void *a, const void *b)
|
||||
#endif
|
||||
{
|
||||
HnswCandidate *hca = lfirst((ListCell *) a);
|
||||
HnswCandidate *hcb = lfirst((ListCell *) b);
|
||||
|
||||
if (hca->distance < hcb->distance)
|
||||
return 1;
|
||||
|
||||
if (hca->distance > hcb->distance)
|
||||
return -1;
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
/*
|
||||
* Update connections
|
||||
*/
|
||||
@@ -878,13 +954,12 @@ HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int
|
||||
{
|
||||
List *c = NIL;
|
||||
|
||||
/* Add and sort candidates */
|
||||
/* Add candidates */
|
||||
for (int i = 0; i < currentNeighbors->length; i++)
|
||||
c = lappend(c, ¤tNeighbors->items[i]);
|
||||
c = lappend(c, &hc2);
|
||||
list_sort(c, CompareCandidateDistances);
|
||||
|
||||
SelectNeighbors(c, m, lc, procinfo, collation, &pruned);
|
||||
SelectNeighbors(c, m, lc, procinfo, collation, hc->element, &hc2, &pruned, true);
|
||||
|
||||
/* Should not happen */
|
||||
if (pruned == NULL)
|
||||
@@ -956,7 +1031,7 @@ HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, F
|
||||
/* 1st phase: greedy search to insert level */
|
||||
for (int lc = entryLevel; lc >= level + 1; lc--)
|
||||
{
|
||||
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, true, skipElement);
|
||||
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, m, true, skipElement);
|
||||
ep = w;
|
||||
}
|
||||
|
||||
@@ -974,7 +1049,7 @@ HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, F
|
||||
List *neighbors;
|
||||
List *lw;
|
||||
|
||||
w = HnswSearchLayer(q, ep, efConstruction, lc, index, procinfo, collation, true, skipElement);
|
||||
w = HnswSearchLayer(q, ep, efConstruction, lc, index, procinfo, collation, m, true, skipElement);
|
||||
|
||||
/* Elements being deleted or skipped can help with search */
|
||||
/* but should be removed before selecting neighbors */
|
||||
@@ -983,7 +1058,12 @@ HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, F
|
||||
else
|
||||
lw = w;
|
||||
|
||||
neighbors = SelectNeighbors(lw, lm, lc, procinfo, collation, NULL);
|
||||
/*
|
||||
* Candidates are sorted, but not deterministically. Could set
|
||||
* sortCandidates to true for in-memory builds to enable closer
|
||||
* caching, but there does not seem to be a difference in performance.
|
||||
*/
|
||||
neighbors = SelectNeighbors(lw, lm, lc, procinfo, collation, element, NULL, NULL, false);
|
||||
|
||||
AddConnections(element, neighbors, lm, lc);
|
||||
|
||||
|
||||
@@ -128,10 +128,7 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
|
||||
blkno = HnswPageGetOpaque(page)->nextblkno;
|
||||
|
||||
if (updated)
|
||||
{
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
}
|
||||
else
|
||||
GenericXLogAbort(state);
|
||||
|
||||
@@ -229,7 +226,6 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
|
||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
|
||||
@@ -330,7 +326,10 @@ RepairGraph(HnswVacuumState * vacuumstate)
|
||||
BufferAccessStrategy bas = vacuumstate->bas;
|
||||
BlockNumber blkno = HNSW_HEAD_BLKNO;
|
||||
|
||||
/* Wait for inserts to complete */
|
||||
/*
|
||||
* Wait for inserts to complete. Inserts before this point may have
|
||||
* neighbors about to be deleted. Inserts after this point will not.
|
||||
*/
|
||||
LockPage(index, HNSW_UPDATE_LOCK, ExclusiveLock);
|
||||
UnlockPage(index, HNSW_UPDATE_LOCK, ExclusiveLock);
|
||||
|
||||
@@ -443,7 +442,11 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
||||
Relation index = vacuumstate->index;
|
||||
BufferAccessStrategy bas = vacuumstate->bas;
|
||||
|
||||
/* Wait for selects to complete */
|
||||
/*
|
||||
* Wait for index scans to complete. Scans before this point may contain
|
||||
* tuples about to be deleted. Scans after this point will not, since the
|
||||
* graph has been repaired.
|
||||
*/
|
||||
LockPage(index, HNSW_SCAN_LOCK, ExclusiveLock);
|
||||
UnlockPage(index, HNSW_SCAN_LOCK, ExclusiveLock);
|
||||
|
||||
@@ -540,9 +543,6 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(buf);
|
||||
if (nbuf != buf)
|
||||
MarkBufferDirty(nbuf);
|
||||
GenericXLogFinish(state);
|
||||
if (nbuf != buf)
|
||||
UnlockReleaseBuffer(nbuf);
|
||||
@@ -582,7 +582,6 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
|
||||
vacuumstate->stats = stats;
|
||||
vacuumstate->callback = callback;
|
||||
vacuumstate->callback_state = callback_state;
|
||||
vacuumstate->m = HnswGetM(index);
|
||||
vacuumstate->efConstruction = HnswGetEfConstruction(index);
|
||||
vacuumstate->bas = GetAccessStrategy(BAS_BULKREAD);
|
||||
vacuumstate->procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||
@@ -592,6 +591,9 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
|
||||
"Hnsw vacuum temporary context",
|
||||
ALLOCSET_DEFAULT_SIZES);
|
||||
|
||||
/* Get m from metapage */
|
||||
HnswGetMetaPageInfo(index, &vacuumstate->m, NULL);
|
||||
|
||||
/* Create hash table */
|
||||
hash_ctl.keysize = sizeof(ItemPointerData);
|
||||
hash_ctl.entrysize = sizeof(ItemPointerData);
|
||||
|
||||
@@ -10,8 +10,8 @@
|
||||
#include "ivfflat.h"
|
||||
#include "miscadmin.h"
|
||||
#include "storage/bufmgr.h"
|
||||
#include "utils/memutils.h"
|
||||
#include "tcop/tcopprot.h"
|
||||
#include "utils/memutils.h"
|
||||
|
||||
#if PG_VERSION_NUM >= 140000
|
||||
#include "utils/backend_progress.h"
|
||||
@@ -506,29 +506,30 @@ CreateListPages(Relation index, VectorArray centers, int dimensions,
|
||||
Buffer buf;
|
||||
Page page;
|
||||
GenericXLogState *state;
|
||||
OffsetNumber offno;
|
||||
Size itemsz;
|
||||
Size listSize;
|
||||
IvfflatList list;
|
||||
|
||||
itemsz = MAXALIGN(IVFFLAT_LIST_SIZE(dimensions));
|
||||
list = palloc(itemsz);
|
||||
listSize = MAXALIGN(IVFFLAT_LIST_SIZE(dimensions));
|
||||
list = palloc(listSize);
|
||||
|
||||
buf = IvfflatNewBuffer(index, forkNum);
|
||||
IvfflatInitRegisterPage(index, &buf, &page, &state);
|
||||
|
||||
for (int i = 0; i < lists; i++)
|
||||
{
|
||||
OffsetNumber offno;
|
||||
|
||||
/* Load list */
|
||||
list->startPage = InvalidBlockNumber;
|
||||
list->insertPage = InvalidBlockNumber;
|
||||
memcpy(&list->center, VectorArrayGet(centers, i), VECTOR_SIZE(dimensions));
|
||||
|
||||
/* Ensure free space */
|
||||
if (PageGetFreeSpace(page) < itemsz)
|
||||
if (PageGetFreeSpace(page) < listSize)
|
||||
IvfflatAppendPage(index, &buf, &page, &state, forkNum);
|
||||
|
||||
/* Add the item */
|
||||
offno = PageAddItem(page, (Item) list, itemsz, InvalidOffsetNumber, false, false);
|
||||
offno = PageAddItem(page, (Item) list, listSize, InvalidOffsetNumber, false, false);
|
||||
if (offno == InvalidOffsetNumber)
|
||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||
|
||||
|
||||
@@ -71,7 +71,7 @@ ivfflatcostestimate(PlannerInfo *root, IndexPath *path, double loop_count,
|
||||
int lists;
|
||||
double ratio;
|
||||
double spc_seq_page_cost;
|
||||
Relation indexRel;
|
||||
Relation index;
|
||||
#if PG_VERSION_NUM < 120000
|
||||
List *qinfos;
|
||||
#endif
|
||||
@@ -89,9 +89,9 @@ ivfflatcostestimate(PlannerInfo *root, IndexPath *path, double loop_count,
|
||||
|
||||
MemSet(&costs, 0, sizeof(costs));
|
||||
|
||||
indexRel = index_open(path->indexinfo->indexoid, NoLock);
|
||||
lists = IvfflatGetLists(indexRel);
|
||||
index_close(indexRel, NoLock);
|
||||
index = index_open(path->indexinfo->indexoid, NoLock);
|
||||
IvfflatGetMetaPageInfo(index, &lists, NULL);
|
||||
index_close(index, NoLock);
|
||||
|
||||
/* Get the ratio of lists that we need to visit */
|
||||
ratio = ((double) ivfflat_probes) / lists;
|
||||
|
||||
@@ -244,8 +244,8 @@ typedef struct IvfflatScanList
|
||||
typedef struct IvfflatScanOpaqueData
|
||||
{
|
||||
int probes;
|
||||
int dimensions;
|
||||
bool first;
|
||||
Buffer buf;
|
||||
|
||||
/* Sorting */
|
||||
Tuplesortstate *sortstate;
|
||||
@@ -275,9 +275,10 @@ VectorArray VectorArrayInit(int maxlen, int dimensions);
|
||||
void VectorArrayFree(VectorArray arr);
|
||||
void PrintVectorArray(char *msg, VectorArray arr);
|
||||
void IvfflatKmeans(Relation index, VectorArray samples, VectorArray centers);
|
||||
FmgrInfo *IvfflatOptionalProcInfo(Relation rel, uint16 procnum);
|
||||
FmgrInfo *IvfflatOptionalProcInfo(Relation index, uint16 procnum);
|
||||
bool IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
||||
int IvfflatGetLists(Relation index);
|
||||
void IvfflatGetMetaPageInfo(Relation index, int *lists, int *dimensions);
|
||||
void IvfflatUpdateList(Relation index, ListInfo listInfo, BlockNumber insertPage, BlockNumber originalInsertPage, BlockNumber startPage, ForkNumber forkNum);
|
||||
void IvfflatCommitBuffer(Buffer buf, GenericXLogState *state);
|
||||
void IvfflatAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **state, ForkNumber forkNum);
|
||||
|
||||
@@ -11,36 +11,37 @@
|
||||
* Find the list that minimizes the distance function
|
||||
*/
|
||||
static void
|
||||
FindInsertPage(Relation rel, Datum *values, BlockNumber *insertPage, ListInfo * listInfo)
|
||||
FindInsertPage(Relation index, Datum *values, BlockNumber *insertPage, ListInfo * listInfo)
|
||||
{
|
||||
Buffer cbuf;
|
||||
Page cpage;
|
||||
IvfflatList list;
|
||||
double distance;
|
||||
double minDistance = DBL_MAX;
|
||||
BlockNumber nextblkno = IVFFLAT_HEAD_BLKNO;
|
||||
FmgrInfo *procinfo;
|
||||
Oid collation;
|
||||
OffsetNumber offno;
|
||||
OffsetNumber maxoffno;
|
||||
|
||||
/* Avoid compiler warning */
|
||||
listInfo->blkno = nextblkno;
|
||||
listInfo->offno = FirstOffsetNumber;
|
||||
|
||||
procinfo = index_getprocinfo(rel, 1, IVFFLAT_DISTANCE_PROC);
|
||||
collation = rel->rd_indcollation[0];
|
||||
procinfo = index_getprocinfo(index, 1, IVFFLAT_DISTANCE_PROC);
|
||||
collation = index->rd_indcollation[0];
|
||||
|
||||
/* Search all list pages */
|
||||
while (BlockNumberIsValid(nextblkno))
|
||||
{
|
||||
cbuf = ReadBuffer(rel, nextblkno);
|
||||
Buffer cbuf;
|
||||
Page cpage;
|
||||
OffsetNumber maxoffno;
|
||||
|
||||
cbuf = ReadBuffer(index, nextblkno);
|
||||
LockBuffer(cbuf, BUFFER_LOCK_SHARE);
|
||||
cpage = BufferGetPage(cbuf);
|
||||
maxoffno = PageGetMaxOffsetNumber(cpage);
|
||||
|
||||
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||
for (OffsetNumber offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||
{
|
||||
IvfflatList list;
|
||||
double distance;
|
||||
|
||||
list = (IvfflatList) PageGetItem(cpage, PageGetItemId(cpage, offno));
|
||||
distance = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, values[0], PointerGetDatum(&list->center)));
|
||||
|
||||
@@ -63,7 +64,7 @@ FindInsertPage(Relation rel, Datum *values, BlockNumber *insertPage, ListInfo *
|
||||
* Insert a tuple into the index
|
||||
*/
|
||||
static void
|
||||
InsertTuple(Relation rel, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel)
|
||||
InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel)
|
||||
{
|
||||
IndexTuple itup;
|
||||
Datum value;
|
||||
@@ -80,33 +81,33 @@ InsertTuple(Relation rel, Datum *values, bool *isnull, ItemPointer heap_tid, Rel
|
||||
value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
|
||||
|
||||
/* Normalize if needed */
|
||||
normprocinfo = IvfflatOptionalProcInfo(rel, IVFFLAT_NORM_PROC);
|
||||
normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_NORM_PROC);
|
||||
if (normprocinfo != NULL)
|
||||
{
|
||||
if (!IvfflatNormValue(normprocinfo, rel->rd_indcollation[0], &value, NULL))
|
||||
if (!IvfflatNormValue(normprocinfo, index->rd_indcollation[0], &value, NULL))
|
||||
return;
|
||||
}
|
||||
|
||||
/* Find the insert page - sets the page and list info */
|
||||
FindInsertPage(rel, values, &insertPage, &listInfo);
|
||||
FindInsertPage(index, values, &insertPage, &listInfo);
|
||||
Assert(BlockNumberIsValid(insertPage));
|
||||
originalInsertPage = insertPage;
|
||||
|
||||
/* Form tuple */
|
||||
itup = index_form_tuple(RelationGetDescr(rel), &value, isnull);
|
||||
itup = index_form_tuple(RelationGetDescr(index), &value, isnull);
|
||||
itup->t_tid = *heap_tid;
|
||||
|
||||
/* Get tuple size */
|
||||
itemsz = MAXALIGN(IndexTupleSize(itup));
|
||||
Assert(itemsz <= BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(IvfflatPageOpaqueData)));
|
||||
Assert(itemsz <= BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(IvfflatPageOpaqueData)) - sizeof(ItemIdData));
|
||||
|
||||
/* Find a page to insert the item */
|
||||
for (;;)
|
||||
{
|
||||
buf = ReadBuffer(rel, insertPage);
|
||||
buf = ReadBuffer(index, insertPage);
|
||||
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
||||
|
||||
state = GenericXLogStart(rel);
|
||||
state = GenericXLogStart(index);
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
|
||||
if (PageGetFreeSpace(page) >= itemsz)
|
||||
@@ -126,9 +127,9 @@ InsertTuple(Relation rel, Datum *values, bool *isnull, ItemPointer heap_tid, Rel
|
||||
Page newpage;
|
||||
|
||||
/* Add a new page */
|
||||
LockRelationForExtension(rel, ExclusiveLock);
|
||||
newbuf = IvfflatNewBuffer(rel, MAIN_FORKNUM);
|
||||
UnlockRelationForExtension(rel, ExclusiveLock);
|
||||
LockRelationForExtension(index, ExclusiveLock);
|
||||
newbuf = IvfflatNewBuffer(index, MAIN_FORKNUM);
|
||||
UnlockRelationForExtension(index, ExclusiveLock);
|
||||
|
||||
/* Init new page */
|
||||
newpage = GenericXLogRegisterBuffer(state, newbuf, GENERIC_XLOG_FULL_IMAGE);
|
||||
@@ -141,15 +142,13 @@ InsertTuple(Relation rel, Datum *values, bool *isnull, ItemPointer heap_tid, Rel
|
||||
IvfflatPageGetOpaque(page)->nextblkno = insertPage;
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(newbuf);
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
|
||||
/* Unlock previous buffer */
|
||||
UnlockReleaseBuffer(buf);
|
||||
|
||||
/* Prepare new buffer */
|
||||
state = GenericXLogStart(rel);
|
||||
state = GenericXLogStart(index);
|
||||
buf = newbuf;
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
break;
|
||||
@@ -158,13 +157,13 @@ InsertTuple(Relation rel, Datum *values, bool *isnull, ItemPointer heap_tid, Rel
|
||||
|
||||
/* Add to next offset */
|
||||
if (PageAddItem(page, (Item) itup, itemsz, InvalidOffsetNumber, false, false) == InvalidOffsetNumber)
|
||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(rel));
|
||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||
|
||||
IvfflatCommitBuffer(buf, state);
|
||||
|
||||
/* Update the insert page */
|
||||
if (insertPage != originalInsertPage)
|
||||
IvfflatUpdateList(rel, listInfo, insertPage, originalInsertPage, InvalidBlockNumber, MAIN_FORKNUM);
|
||||
IvfflatUpdateList(index, listInfo, insertPage, originalInsertPage, InvalidBlockNumber, MAIN_FORKNUM);
|
||||
}
|
||||
|
||||
/*
|
||||
|
||||
@@ -17,10 +17,6 @@ InitCenters(Relation index, VectorArray samples, VectorArray centers, float *low
|
||||
FmgrInfo *procinfo;
|
||||
Oid collation;
|
||||
int64 j;
|
||||
double distance;
|
||||
double sum;
|
||||
double choice;
|
||||
Vector *vec;
|
||||
float *weight = palloc(samples->length * sizeof(float));
|
||||
int numCenters = centers->maxlen;
|
||||
int numSamples = samples->length;
|
||||
@@ -33,17 +29,21 @@ InitCenters(Relation index, VectorArray samples, VectorArray centers, float *low
|
||||
centers->length++;
|
||||
|
||||
for (j = 0; j < numSamples; j++)
|
||||
weight[j] = DBL_MAX;
|
||||
weight[j] = FLT_MAX;
|
||||
|
||||
for (int i = 0; i < numCenters; i++)
|
||||
{
|
||||
double sum;
|
||||
double choice;
|
||||
|
||||
CHECK_FOR_INTERRUPTS();
|
||||
|
||||
sum = 0.0;
|
||||
|
||||
for (j = 0; j < numSamples; j++)
|
||||
{
|
||||
vec = VectorArrayGet(samples, j);
|
||||
Vector *vec = VectorArrayGet(samples, j);
|
||||
double distance;
|
||||
|
||||
/* Only need to compute distance for new center */
|
||||
/* TODO Use triangle inequality to reduce distance calculations */
|
||||
@@ -112,7 +112,6 @@ CompareVectors(const void *a, const void *b)
|
||||
static void
|
||||
QuickCenters(Relation index, VectorArray samples, VectorArray centers)
|
||||
{
|
||||
Vector *vec;
|
||||
int dimensions = centers->dim;
|
||||
Oid collation = index->rd_indcollation[0];
|
||||
FmgrInfo *normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_KMEANS_NORM_PROC);
|
||||
@@ -123,7 +122,7 @@ QuickCenters(Relation index, VectorArray samples, VectorArray centers)
|
||||
qsort(samples->items, samples->length, VECTOR_SIZE(samples->dim), CompareVectors);
|
||||
for (int i = 0; i < samples->length; i++)
|
||||
{
|
||||
vec = VectorArrayGet(samples, i);
|
||||
Vector *vec = VectorArrayGet(samples, i);
|
||||
|
||||
if (i == 0 || CompareVectors(vec, VectorArrayGet(samples, i - 1)) != 0)
|
||||
{
|
||||
@@ -136,7 +135,7 @@ QuickCenters(Relation index, VectorArray samples, VectorArray centers)
|
||||
/* Fill remaining with random data */
|
||||
while (centers->length < centers->maxlen)
|
||||
{
|
||||
vec = VectorArrayGet(centers, centers->length);
|
||||
Vector *vec = VectorArrayGet(centers, centers->length);
|
||||
|
||||
SET_VARSIZE(vec, VECTOR_SIZE(dimensions));
|
||||
vec->dim = dimensions;
|
||||
@@ -168,7 +167,6 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
Oid collation;
|
||||
Vector *vec;
|
||||
Vector *newCenter;
|
||||
int iteration;
|
||||
int64 j;
|
||||
int64 k;
|
||||
int dimensions = centers->dim;
|
||||
@@ -182,14 +180,6 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
float *s;
|
||||
float *halfcdist;
|
||||
float *newcdist;
|
||||
int changes;
|
||||
double minDistance;
|
||||
int closestCenter;
|
||||
double distance;
|
||||
bool rj;
|
||||
bool rjreset;
|
||||
double dxcx;
|
||||
double dxc;
|
||||
|
||||
/* Calculate allocation sizes */
|
||||
Size samplesSize = VECTOR_ARRAY_SIZE(samples->maxlen, samples->dim);
|
||||
@@ -247,14 +237,14 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
/* Assign each x to its closest initial center c(x) = argmin d(x,c) */
|
||||
for (j = 0; j < numSamples; j++)
|
||||
{
|
||||
minDistance = DBL_MAX;
|
||||
closestCenter = 0;
|
||||
float minDistance = FLT_MAX;
|
||||
int closestCenter = 0;
|
||||
|
||||
/* Find closest center */
|
||||
for (k = 0; k < numCenters; k++)
|
||||
{
|
||||
/* TODO Use Lemma 1 in k-means++ initialization */
|
||||
distance = lowerBound[j * numCenters + k];
|
||||
float distance = lowerBound[j * numCenters + k];
|
||||
|
||||
if (distance < minDistance)
|
||||
{
|
||||
@@ -268,13 +258,14 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
}
|
||||
|
||||
/* Give 500 iterations to converge */
|
||||
for (iteration = 0; iteration < 500; iteration++)
|
||||
for (int iteration = 0; iteration < 500; iteration++)
|
||||
{
|
||||
int changes = 0;
|
||||
bool rjreset;
|
||||
|
||||
/* Can take a while, so ensure we can interrupt */
|
||||
CHECK_FOR_INTERRUPTS();
|
||||
|
||||
changes = 0;
|
||||
|
||||
/* Step 1: For all centers, compute distance */
|
||||
for (j = 0; j < numCenters; j++)
|
||||
{
|
||||
@@ -282,7 +273,8 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
|
||||
for (k = j + 1; k < numCenters; k++)
|
||||
{
|
||||
distance = 0.5 * DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k))));
|
||||
float distance = 0.5 * DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k))));
|
||||
|
||||
halfcdist[j * numCenters + k] = distance;
|
||||
halfcdist[k * numCenters + j] = distance;
|
||||
}
|
||||
@@ -291,10 +283,12 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
/* For all centers c, compute s(c) */
|
||||
for (j = 0; j < numCenters; j++)
|
||||
{
|
||||
minDistance = DBL_MAX;
|
||||
float minDistance = FLT_MAX;
|
||||
|
||||
for (k = 0; k < numCenters; k++)
|
||||
{
|
||||
float distance;
|
||||
|
||||
if (j == k)
|
||||
continue;
|
||||
|
||||
@@ -310,6 +304,8 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
|
||||
for (j = 0; j < numSamples; j++)
|
||||
{
|
||||
bool rj;
|
||||
|
||||
/* Step 2: Identify all points x such that u(x) <= s(c(x)) */
|
||||
if (upperBound[j] <= s[closestCenters[j]])
|
||||
continue;
|
||||
@@ -318,6 +314,8 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
|
||||
for (k = 0; k < numCenters; k++)
|
||||
{
|
||||
float dxcx;
|
||||
|
||||
/* Step 3: For all remaining points x and centers c */
|
||||
if (k == closestCenters[j])
|
||||
continue;
|
||||
@@ -347,7 +345,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
/* Step 3b */
|
||||
if (dxcx > lowerBound[j * numCenters + k] || dxcx > halfcdist[closestCenters[j] * numCenters + k])
|
||||
{
|
||||
dxc = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k))));
|
||||
float dxc = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k))));
|
||||
|
||||
/* d(x,c) calculated */
|
||||
lowerBound[j * numCenters + k] = dxc;
|
||||
@@ -361,7 +359,6 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
|
||||
changes++;
|
||||
}
|
||||
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -378,6 +375,8 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
|
||||
for (j = 0; j < numSamples; j++)
|
||||
{
|
||||
int closestCenter;
|
||||
|
||||
vec = VectorArrayGet(samples, j);
|
||||
closestCenter = closestCenters[j];
|
||||
|
||||
@@ -426,7 +425,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
{
|
||||
for (k = 0; k < numCenters; k++)
|
||||
{
|
||||
distance = lowerBound[j * numCenters + k] - newcdist[k];
|
||||
float distance = lowerBound[j * numCenters + k] - newcdist[k];
|
||||
|
||||
if (distance < 0)
|
||||
distance = 0;
|
||||
@@ -442,7 +441,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||
|
||||
/* Step 7 */
|
||||
for (j = 0; j < numCenters; j++)
|
||||
memcpy(VectorArrayGet(centers, j), VectorArrayGet(newCenters, j), VECTOR_SIZE(dimensions));
|
||||
VectorArraySet(centers, j, VectorArrayGet(newCenters, j));
|
||||
|
||||
if (changes == 0 && iteration != 0)
|
||||
break;
|
||||
@@ -465,9 +464,6 @@ static void
|
||||
CheckCenters(Relation index, VectorArray centers)
|
||||
{
|
||||
FmgrInfo *normprocinfo;
|
||||
Oid collation;
|
||||
Vector *vec;
|
||||
double norm;
|
||||
|
||||
if (centers->length != centers->maxlen)
|
||||
elog(ERROR, "Not enough centers. Please report a bug.");
|
||||
@@ -475,7 +471,7 @@ CheckCenters(Relation index, VectorArray centers)
|
||||
/* Ensure no NaN or infinite values */
|
||||
for (int i = 0; i < centers->length; i++)
|
||||
{
|
||||
vec = VectorArrayGet(centers, i);
|
||||
Vector *vec = VectorArrayGet(centers, i);
|
||||
|
||||
for (int j = 0; j < vec->dim; j++)
|
||||
{
|
||||
@@ -501,11 +497,12 @@ CheckCenters(Relation index, VectorArray centers)
|
||||
normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_NORM_PROC);
|
||||
if (normprocinfo != NULL)
|
||||
{
|
||||
collation = index->rd_indcollation[0];
|
||||
Oid collation = index->rd_indcollation[0];
|
||||
|
||||
for (int i = 0; i < centers->length; i++)
|
||||
{
|
||||
norm = DatumGetFloat8(FunctionCall1Coll(normprocinfo, collation, PointerGetDatum(VectorArrayGet(centers, i))));
|
||||
double norm = DatumGetFloat8(FunctionCall1Coll(normprocinfo, collation, PointerGetDatum(VectorArrayGet(centers, i))));
|
||||
|
||||
if (norm == 0)
|
||||
elog(ERROR, "Zero norm detected. Please report a bug.");
|
||||
}
|
||||
|
||||
113
src/ivfscan.c
113
src/ivfscan.c
@@ -31,36 +31,36 @@ CompareLists(const pairingheap_node *a, const pairingheap_node *b, void *arg)
|
||||
static void
|
||||
GetScanLists(IndexScanDesc scan, Datum value)
|
||||
{
|
||||
Buffer cbuf;
|
||||
Page cpage;
|
||||
IvfflatList list;
|
||||
OffsetNumber offno;
|
||||
OffsetNumber maxoffno;
|
||||
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
|
||||
BlockNumber nextblkno = IVFFLAT_HEAD_BLKNO;
|
||||
int listCount = 0;
|
||||
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
|
||||
double distance;
|
||||
IvfflatScanList *scanlist;
|
||||
double maxDistance = DBL_MAX;
|
||||
|
||||
/* Search all list pages */
|
||||
while (BlockNumberIsValid(nextblkno))
|
||||
{
|
||||
Buffer cbuf;
|
||||
Page cpage;
|
||||
OffsetNumber maxoffno;
|
||||
|
||||
cbuf = ReadBuffer(scan->indexRelation, nextblkno);
|
||||
LockBuffer(cbuf, BUFFER_LOCK_SHARE);
|
||||
cpage = BufferGetPage(cbuf);
|
||||
|
||||
maxoffno = PageGetMaxOffsetNumber(cpage);
|
||||
|
||||
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||
for (OffsetNumber offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||
{
|
||||
list = (IvfflatList) PageGetItem(cpage, PageGetItemId(cpage, offno));
|
||||
IvfflatList list = (IvfflatList) PageGetItem(cpage, PageGetItemId(cpage, offno));
|
||||
double distance;
|
||||
|
||||
/* Use procinfo from the index instead of scan key for performance */
|
||||
distance = DatumGetFloat8(FunctionCall2Coll(so->procinfo, so->collation, PointerGetDatum(&list->center), value));
|
||||
|
||||
if (listCount < so->probes)
|
||||
{
|
||||
IvfflatScanList *scanlist;
|
||||
|
||||
scanlist = &so->lists[listCount];
|
||||
scanlist->startPage = list->startPage;
|
||||
scanlist->distance = distance;
|
||||
@@ -75,6 +75,8 @@ GetScanLists(IndexScanDesc scan, Datum value)
|
||||
}
|
||||
else if (distance < maxDistance)
|
||||
{
|
||||
IvfflatScanList *scanlist;
|
||||
|
||||
/* Remove */
|
||||
scanlist = (IvfflatScanList *) pairingheap_remove_first(so->listQueue);
|
||||
|
||||
@@ -101,14 +103,6 @@ static void
|
||||
GetScanItems(IndexScanDesc scan, Datum value)
|
||||
{
|
||||
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
|
||||
Buffer buf;
|
||||
Page page;
|
||||
IndexTuple itup;
|
||||
BlockNumber searchPage;
|
||||
OffsetNumber offno;
|
||||
OffsetNumber maxoffno;
|
||||
Datum datum;
|
||||
bool isnull;
|
||||
TupleDesc tupdesc = RelationGetDescr(scan->indexRelation);
|
||||
double tuples = 0;
|
||||
|
||||
@@ -128,19 +122,28 @@ GetScanItems(IndexScanDesc scan, Datum value)
|
||||
/* Search closest probes lists */
|
||||
while (!pairingheap_is_empty(so->listQueue))
|
||||
{
|
||||
searchPage = ((IvfflatScanList *) pairingheap_remove_first(so->listQueue))->startPage;
|
||||
BlockNumber searchPage = ((IvfflatScanList *) pairingheap_remove_first(so->listQueue))->startPage;
|
||||
|
||||
/* Search all entry pages for list */
|
||||
while (BlockNumberIsValid(searchPage))
|
||||
{
|
||||
Buffer buf;
|
||||
Page page;
|
||||
OffsetNumber maxoffno;
|
||||
|
||||
buf = ReadBufferExtended(scan->indexRelation, MAIN_FORKNUM, searchPage, RBM_NORMAL, bas);
|
||||
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
||||
page = BufferGetPage(buf);
|
||||
maxoffno = PageGetMaxOffsetNumber(page);
|
||||
|
||||
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||
for (OffsetNumber offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||
{
|
||||
itup = (IndexTuple) PageGetItem(page, PageGetItemId(page, offno));
|
||||
IndexTuple itup;
|
||||
Datum datum;
|
||||
bool isnull;
|
||||
ItemId itemid = PageGetItemId(page, offno);
|
||||
|
||||
itup = (IndexTuple) PageGetItem(page, itemid);
|
||||
datum = index_getattr(itup, 1, tupdesc, &isnull);
|
||||
|
||||
/*
|
||||
@@ -154,8 +157,6 @@ GetScanItems(IndexScanDesc scan, Datum value)
|
||||
slot->tts_isnull[0] = false;
|
||||
slot->tts_values[1] = PointerGetDatum(&itup->t_tid);
|
||||
slot->tts_isnull[1] = false;
|
||||
slot->tts_values[2] = Int32GetDatum((int) searchPage);
|
||||
slot->tts_isnull[2] = false;
|
||||
ExecStoreVirtualTuple(slot);
|
||||
|
||||
tuplesort_puttupleslot(so->sortstate, slot);
|
||||
@@ -180,29 +181,6 @@ GetScanItems(IndexScanDesc scan, Datum value)
|
||||
tuplesort_performsort(so->sortstate);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get dimensions from metapage
|
||||
*/
|
||||
static int
|
||||
GetDimensions(Relation index)
|
||||
{
|
||||
Buffer buf;
|
||||
Page page;
|
||||
IvfflatMetaPage metap;
|
||||
int dimensions;
|
||||
|
||||
buf = ReadBuffer(index, IVFFLAT_METAPAGE_BLKNO);
|
||||
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
||||
page = BufferGetPage(buf);
|
||||
metap = IvfflatPageGetMeta(page);
|
||||
|
||||
dimensions = metap->dimensions;
|
||||
|
||||
UnlockReleaseBuffer(buf);
|
||||
|
||||
return dimensions;
|
||||
}
|
||||
|
||||
/*
|
||||
* Prepare for an index scan
|
||||
*/
|
||||
@@ -212,6 +190,7 @@ ivfflatbeginscan(Relation index, int nkeys, int norderbys)
|
||||
IndexScanDesc scan;
|
||||
IvfflatScanOpaque so;
|
||||
int lists;
|
||||
int dimensions;
|
||||
AttrNumber attNums[] = {1};
|
||||
Oid sortOperators[] = {Float8LessOperator};
|
||||
Oid sortCollations[] = {InvalidOid};
|
||||
@@ -219,15 +198,17 @@ ivfflatbeginscan(Relation index, int nkeys, int norderbys)
|
||||
int probes = ivfflat_probes;
|
||||
|
||||
scan = RelationGetIndexScan(index, nkeys, norderbys);
|
||||
lists = IvfflatGetLists(scan->indexRelation);
|
||||
|
||||
/* Get lists and dimensions from metapage */
|
||||
IvfflatGetMetaPageInfo(index, &lists, &dimensions);
|
||||
|
||||
if (probes > lists)
|
||||
probes = lists;
|
||||
|
||||
so = (IvfflatScanOpaque) palloc(offsetof(IvfflatScanOpaqueData, lists) + probes * sizeof(IvfflatScanList));
|
||||
so->buf = InvalidBuffer;
|
||||
so->first = true;
|
||||
so->probes = probes;
|
||||
so->dimensions = dimensions;
|
||||
|
||||
/* Set support functions */
|
||||
so->procinfo = index_getprocinfo(index, 1, IVFFLAT_DISTANCE_PROC);
|
||||
@@ -236,13 +217,12 @@ ivfflatbeginscan(Relation index, int nkeys, int norderbys)
|
||||
|
||||
/* Create tuple description for sorting */
|
||||
#if PG_VERSION_NUM >= 120000
|
||||
so->tupdesc = CreateTemplateTupleDesc(3);
|
||||
so->tupdesc = CreateTemplateTupleDesc(2);
|
||||
#else
|
||||
so->tupdesc = CreateTemplateTupleDesc(3, false);
|
||||
so->tupdesc = CreateTemplateTupleDesc(2, false);
|
||||
#endif
|
||||
TupleDescInitEntry(so->tupdesc, (AttrNumber) 1, "distance", FLOAT8OID, -1, 0);
|
||||
TupleDescInitEntry(so->tupdesc, (AttrNumber) 2, "tid", TIDOID, -1, 0);
|
||||
TupleDescInitEntry(so->tupdesc, (AttrNumber) 3, "indexblkno", INT4OID, -1, 0);
|
||||
TupleDescInitEntry(so->tupdesc, (AttrNumber) 2, "heaptid", TIDOID, -1, 0);
|
||||
|
||||
/* Prep sort */
|
||||
so->sortstate = tuplesort_begin_heap(so->tupdesc, 1, attNums, sortOperators, sortCollations, nullsFirstFlags, work_mem, NULL, false);
|
||||
@@ -308,8 +288,13 @@ ivfflatgettuple(IndexScanDesc scan, ScanDirection dir)
|
||||
if (scan->orderByData == NULL)
|
||||
elog(ERROR, "cannot scan ivfflat index without order");
|
||||
|
||||
/* Requires MVCC-compliant snapshot as not able to pin during sorting */
|
||||
/* https://www.postgresql.org/docs/current/index-locking.html */
|
||||
if (!IsMVCCSnapshot(scan->xs_snapshot))
|
||||
elog(ERROR, "non-MVCC snapshots are not supported with ivfflat");
|
||||
|
||||
if (scan->orderByData->sk_flags & SK_ISNULL)
|
||||
value = PointerGetDatum(InitVector(GetDimensions(scan->indexRelation)));
|
||||
value = PointerGetDatum(InitVector(so->dimensions));
|
||||
else
|
||||
{
|
||||
value = scan->orderByData->sk_argument;
|
||||
@@ -334,26 +319,14 @@ ivfflatgettuple(IndexScanDesc scan, ScanDirection dir)
|
||||
|
||||
if (tuplesort_gettupleslot(so->sortstate, true, false, so->slot, NULL))
|
||||
{
|
||||
ItemPointer tid = (ItemPointer) DatumGetPointer(slot_getattr(so->slot, 2, &so->isnull));
|
||||
BlockNumber indexblkno = DatumGetInt32(slot_getattr(so->slot, 3, &so->isnull));
|
||||
ItemPointer heaptid = (ItemPointer) DatumGetPointer(slot_getattr(so->slot, 2, &so->isnull));
|
||||
|
||||
#if PG_VERSION_NUM >= 120000
|
||||
scan->xs_heaptid = *tid;
|
||||
scan->xs_heaptid = *heaptid;
|
||||
#else
|
||||
scan->xs_ctup.t_self = *tid;
|
||||
scan->xs_ctup.t_self = *heaptid;
|
||||
#endif
|
||||
|
||||
if (BufferIsValid(so->buf))
|
||||
ReleaseBuffer(so->buf);
|
||||
|
||||
/*
|
||||
* An index scan must maintain a pin on the index page holding the
|
||||
* item last returned by amgettuple
|
||||
*
|
||||
* https://www.postgresql.org/docs/current/index-locking.html
|
||||
*/
|
||||
so->buf = ReadBuffer(scan->indexRelation, indexblkno);
|
||||
|
||||
scan->xs_recheckorderby = false;
|
||||
return true;
|
||||
}
|
||||
@@ -369,10 +342,6 @@ ivfflatendscan(IndexScanDesc scan)
|
||||
{
|
||||
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
|
||||
|
||||
/* Release pin */
|
||||
if (BufferIsValid(so->buf))
|
||||
ReleaseBuffer(so->buf);
|
||||
|
||||
pairingheap_free(so->listQueue);
|
||||
tuplesort_end(so->sortstate);
|
||||
|
||||
|
||||
@@ -57,12 +57,12 @@ IvfflatGetLists(Relation index)
|
||||
* Get proc
|
||||
*/
|
||||
FmgrInfo *
|
||||
IvfflatOptionalProcInfo(Relation rel, uint16 procnum)
|
||||
IvfflatOptionalProcInfo(Relation index, uint16 procnum)
|
||||
{
|
||||
if (!OidIsValid(index_getprocid(rel, 1, procnum)))
|
||||
if (!OidIsValid(index_getprocid(index, 1, procnum)))
|
||||
return NULL;
|
||||
|
||||
return index_getprocinfo(rel, 1, procnum);
|
||||
return index_getprocinfo(index, 1, procnum);
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -136,7 +136,6 @@ IvfflatInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogStat
|
||||
void
|
||||
IvfflatCommitBuffer(Buffer buf, GenericXLogState *state)
|
||||
{
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
UnlockReleaseBuffer(buf);
|
||||
}
|
||||
@@ -160,8 +159,6 @@ IvfflatAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **st
|
||||
IvfflatInitPage(newbuf, newpage);
|
||||
|
||||
/* Commit */
|
||||
MarkBufferDirty(*buf);
|
||||
MarkBufferDirty(newbuf);
|
||||
GenericXLogFinish(*state);
|
||||
|
||||
/* Unlock */
|
||||
@@ -172,6 +169,29 @@ IvfflatAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **st
|
||||
*buf = newbuf;
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the metapage info
|
||||
*/
|
||||
void
|
||||
IvfflatGetMetaPageInfo(Relation index, int *lists, int *dimensions)
|
||||
{
|
||||
Buffer buf;
|
||||
Page page;
|
||||
IvfflatMetaPage metap;
|
||||
|
||||
buf = ReadBuffer(index, IVFFLAT_METAPAGE_BLKNO);
|
||||
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
||||
page = BufferGetPage(buf);
|
||||
metap = IvfflatPageGetMeta(page);
|
||||
|
||||
*lists = metap->lists;
|
||||
|
||||
if (dimensions != NULL)
|
||||
*dimensions = metap->dimensions;
|
||||
|
||||
UnlockReleaseBuffer(buf);
|
||||
}
|
||||
|
||||
/*
|
||||
* Update the start or insert page of a list
|
||||
*/
|
||||
|
||||
@@ -107,7 +107,6 @@ ivfflatbulkdelete(IndexVacuumInfo *info, IndexBulkDeleteResult *stats,
|
||||
{
|
||||
/* Delete tuples */
|
||||
PageIndexMultiDelete(page, deletable, ndeletable);
|
||||
MarkBufferDirty(buf);
|
||||
GenericXLogFinish(state);
|
||||
}
|
||||
else
|
||||
|
||||
705
src/svector.c
Normal file
705
src/svector.c
Normal file
@@ -0,0 +1,705 @@
|
||||
#include "postgres.h"
|
||||
|
||||
#include <math.h>
|
||||
|
||||
#include "fmgr.h"
|
||||
#include "libpq/pqformat.h"
|
||||
#include "svector.h"
|
||||
#include "utils/array.h"
|
||||
#include "vector.h"
|
||||
|
||||
#if PG_VERSION_NUM >= 120000
|
||||
#include "common/shortest_dec.h"
|
||||
#include "utils/float.h"
|
||||
#else
|
||||
#include <float.h>
|
||||
#include "utils/builtins.h"
|
||||
#endif
|
||||
|
||||
/*
|
||||
* Ensure same dimensions
|
||||
*/
|
||||
static inline void
|
||||
CheckDims(SVector * a, SVector * b)
|
||||
{
|
||||
if (a->dim != b->dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("different svector dimensions %d and %d", a->dim, b->dim)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure expected dimensions
|
||||
*/
|
||||
static inline void
|
||||
CheckExpectedDim(int32 typmod, int dim)
|
||||
{
|
||||
if (typmod != -1 && typmod != dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("expected %d dimensions, not %d", typmod, dim)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure valid dimensions
|
||||
*/
|
||||
static inline void
|
||||
CheckDim(int dim)
|
||||
{
|
||||
if (dim < 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("svector must have at least 1 dimension")));
|
||||
|
||||
if (dim > SVECTOR_MAX_DIM)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
|
||||
errmsg("svector cannot have more than %d dimensions", SVECTOR_MAX_DIM)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure valid nnz
|
||||
*/
|
||||
static inline void
|
||||
CheckNnz(int nnz, int dim)
|
||||
{
|
||||
if (nnz < 0)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("svector must have at least one element")));
|
||||
|
||||
if (nnz > dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
|
||||
errmsg("svector cannot have more elements than dimensions")));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure valid index
|
||||
*/
|
||||
static inline void
|
||||
CheckIndex(int32 *indices, int i, int dim)
|
||||
{
|
||||
int32 index = indices[i];
|
||||
|
||||
if (index < 0)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("index must not be negative")));
|
||||
|
||||
if (index >= dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("index must be less than dimensions")));
|
||||
|
||||
if (i > 0)
|
||||
{
|
||||
if (index < indices[i - 1])
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("indexes must be in ascending order")));
|
||||
|
||||
if (index == indices[i - 1])
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("indexes must not contain duplicates")));
|
||||
}
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure finite element
|
||||
*/
|
||||
static inline void
|
||||
CheckElement(float value)
|
||||
{
|
||||
if (isnan(value))
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("NaN not allowed in svector")));
|
||||
|
||||
if (isinf(value))
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("infinite value not allowed in svector")));
|
||||
}
|
||||
|
||||
/*
|
||||
* Allocate and initialize a new sparse vector
|
||||
*/
|
||||
SVector *
|
||||
InitSVector(int dim, int nnz)
|
||||
{
|
||||
SVector *result;
|
||||
int size;
|
||||
|
||||
size = SVECTOR_SIZE(nnz);
|
||||
result = (SVector *) palloc0(size);
|
||||
SET_VARSIZE(result, size);
|
||||
result->dim = dim;
|
||||
result->nnz = nnz;
|
||||
|
||||
return result;
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert textual representation to internal representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_in);
|
||||
Datum
|
||||
svector_in(PG_FUNCTION_ARGS)
|
||||
{
|
||||
char *str = PG_GETARG_CSTRING(0);
|
||||
int32 typmod = PG_GETARG_INT32(2);
|
||||
int dim;
|
||||
char *pt;
|
||||
SVector *result;
|
||||
float *rvalues;
|
||||
char *lit = pstrdup(str);
|
||||
int n;
|
||||
int32 *indices;
|
||||
float *values;
|
||||
int index;
|
||||
float value;
|
||||
int maxNnz;
|
||||
int nnz = 0;
|
||||
|
||||
/* TODO Improve code and checks after deciding on format */
|
||||
|
||||
maxNnz = 1;
|
||||
pt = str;
|
||||
while (*pt != '\0')
|
||||
{
|
||||
if (*pt == ',')
|
||||
maxNnz++;
|
||||
|
||||
pt++;
|
||||
}
|
||||
maxNnz /= 2;
|
||||
|
||||
indices = palloc(maxNnz * sizeof(int32));
|
||||
values = palloc(maxNnz * sizeof(float));
|
||||
|
||||
while (sscanf(str, "(%d,%f)%n", &index, &value, &n) == 2)
|
||||
{
|
||||
/* TODO Better error */
|
||||
if (nnz == maxNnz)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("ran out of buffer: \"%s\"", lit)));
|
||||
|
||||
/* TODO Decide whether to store zero values */
|
||||
indices[nnz] = index;
|
||||
values[nnz] = value;
|
||||
nnz++;
|
||||
|
||||
str += n;
|
||||
|
||||
if (*str == ',')
|
||||
str++;
|
||||
else if (*str == '|')
|
||||
break;
|
||||
else
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("malformed svector literal: \"%s\"", lit)));
|
||||
}
|
||||
|
||||
if (sscanf(str, "|%d|%n", &dim, &n) != 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("malformed svector literal: \"%s\"", lit)));
|
||||
|
||||
str += n;
|
||||
|
||||
if (*str != '\0')
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("malformed svector literal: \"%s\"", lit),
|
||||
errdetail("Junk after closing pipe.")));
|
||||
|
||||
pfree(lit);
|
||||
|
||||
CheckDim(dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
result = InitSVector(dim, nnz);
|
||||
rvalues = SVECTOR_VALUES(result);
|
||||
for (int i = 0; i < nnz; i++)
|
||||
{
|
||||
result->indices[i] = indices[i];
|
||||
rvalues[i] = values[i];
|
||||
|
||||
CheckIndex(result->indices, i, dim);
|
||||
CheckElement(rvalues[i]);
|
||||
}
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert internal representation to textual representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_out);
|
||||
Datum
|
||||
svector_out(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svector = PG_GETARG_SVECTOR_P(0);
|
||||
float *values = SVECTOR_VALUES(svector);
|
||||
char *buf;
|
||||
char *ptr;
|
||||
int n;
|
||||
|
||||
/* TODO Improve code after deciding on format */
|
||||
|
||||
#if PG_VERSION_NUM < 120000
|
||||
int ndig = FLT_DIG + extra_float_digits;
|
||||
|
||||
if (ndig < 1)
|
||||
ndig = 1;
|
||||
|
||||
#define FLOAT_SHORTEST_DECIMAL_LEN (ndig + 10)
|
||||
#endif
|
||||
|
||||
/* TODO Move */
|
||||
#define APPEND_CHAR(ptr, ch) (*(ptr)++ = (ch))
|
||||
|
||||
/* TODO Improve */
|
||||
buf = (char *) palloc((FLOAT_SHORTEST_DECIMAL_LEN + 20) * svector->nnz + 20);
|
||||
ptr = buf;
|
||||
|
||||
for (int i = 0; i < svector->nnz; i++)
|
||||
{
|
||||
if (i > 0)
|
||||
APPEND_CHAR(ptr, ',');
|
||||
|
||||
n = sprintf(ptr, "(%d,", svector->indices[i]);
|
||||
ptr += n;
|
||||
|
||||
#if PG_VERSION_NUM >= 120000
|
||||
n = float_to_shortest_decimal_bufn(values[i], ptr);
|
||||
#else
|
||||
n = sprintf(ptr, "%.*g", ndig, values[i]);
|
||||
#endif
|
||||
ptr += n;
|
||||
|
||||
APPEND_CHAR(ptr, ')');
|
||||
}
|
||||
|
||||
n = sprintf(ptr, "|%d|", svector->dim);
|
||||
ptr += n;
|
||||
|
||||
APPEND_CHAR(ptr, '\0');
|
||||
|
||||
PG_FREE_IF_COPY(svector, 0);
|
||||
PG_RETURN_CSTRING(buf);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert type modifier
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_typmod_in);
|
||||
Datum
|
||||
svector_typmod_in(PG_FUNCTION_ARGS)
|
||||
{
|
||||
ArrayType *ta = PG_GETARG_ARRAYTYPE_P(0);
|
||||
int32 *tl;
|
||||
int n;
|
||||
|
||||
tl = ArrayGetIntegerTypmods(ta, &n);
|
||||
|
||||
if (n != 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
|
||||
errmsg("invalid type modifier")));
|
||||
|
||||
if (*tl < 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
|
||||
errmsg("dimensions for type svector must be at least 1")));
|
||||
|
||||
if (*tl > SVECTOR_MAX_DIM)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
|
||||
errmsg("dimensions for type svector cannot exceed %d", SVECTOR_MAX_DIM)));
|
||||
|
||||
PG_RETURN_INT32(*tl);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert external binary representation to internal representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_recv);
|
||||
Datum
|
||||
svector_recv(PG_FUNCTION_ARGS)
|
||||
{
|
||||
StringInfo buf = (StringInfo) PG_GETARG_POINTER(0);
|
||||
int32 typmod = PG_GETARG_INT32(2);
|
||||
SVector *result;
|
||||
int32 dim;
|
||||
int32 nnz;
|
||||
int32 unused;
|
||||
float *values;
|
||||
|
||||
dim = pq_getmsgint(buf, sizeof(int32));
|
||||
nnz = pq_getmsgint(buf, sizeof(int32));
|
||||
unused = pq_getmsgint(buf, sizeof(int32));
|
||||
|
||||
CheckDim(dim);
|
||||
CheckNnz(nnz, dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
if (unused != 0)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("expected unused to be 0, not %d", unused)));
|
||||
|
||||
result = InitSVector(dim, nnz);
|
||||
values = SVECTOR_VALUES(result);
|
||||
|
||||
for (int i = 0; i < nnz; i++)
|
||||
{
|
||||
result->indices[i] = pq_getmsgint(buf, sizeof(int32));
|
||||
CheckIndex(result->indices, i, dim);
|
||||
}
|
||||
|
||||
for (int i = 0; i < nnz; i++)
|
||||
{
|
||||
values[i] = pq_getmsgfloat4(buf);
|
||||
CheckElement(values[i]);
|
||||
}
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert internal representation to the external binary representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_send);
|
||||
Datum
|
||||
svector_send(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svec = PG_GETARG_SVECTOR_P(0);
|
||||
float *values = SVECTOR_VALUES(svec);
|
||||
StringInfoData buf;
|
||||
|
||||
pq_begintypsend(&buf);
|
||||
pq_sendint(&buf, svec->dim, sizeof(int32));
|
||||
pq_sendint(&buf, svec->nnz, sizeof(int32));
|
||||
pq_sendint(&buf, svec->unused, sizeof(int32));
|
||||
for (int i = 0; i < svec->nnz; i++)
|
||||
pq_sendint(&buf, svec->indices[i], sizeof(int32));
|
||||
for (int i = 0; i < svec->nnz; i++)
|
||||
pq_sendfloat4(&buf, values[i]);
|
||||
|
||||
PG_RETURN_BYTEA_P(pq_endtypsend(&buf));
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert sparse vector to sparse vector
|
||||
* This is needed to check the type modifier
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector);
|
||||
Datum
|
||||
svector(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svec = PG_GETARG_SVECTOR_P(0);
|
||||
int32 typmod = PG_GETARG_INT32(1);
|
||||
|
||||
CheckExpectedDim(typmod, svec->dim);
|
||||
|
||||
PG_RETURN_POINTER(svec);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert dense vector to sparse vector
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_to_svector);
|
||||
Datum
|
||||
vector_to_svector(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *vec = PG_GETARG_VECTOR_P(0);
|
||||
int32 typmod = PG_GETARG_INT32(1);
|
||||
SVector *result;
|
||||
int dim = vec->dim;
|
||||
int nnz = 0;
|
||||
float *values;
|
||||
int j = 0;
|
||||
|
||||
CheckDim(dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
for (int i = 0; i < dim; i++)
|
||||
{
|
||||
if (vec->x[i] != 0)
|
||||
nnz++;
|
||||
}
|
||||
|
||||
result = InitSVector(dim, nnz);
|
||||
values = SVECTOR_VALUES(result);
|
||||
for (int i = 0; i < dim; i++)
|
||||
{
|
||||
if (vec->x[i] != 0)
|
||||
{
|
||||
/* Safety check */
|
||||
if (j == nnz)
|
||||
elog(ERROR, "safety check failed");
|
||||
|
||||
result->indices[j] = i;
|
||||
values[j] = vec->x[i];
|
||||
j++;
|
||||
}
|
||||
}
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the L2 squared distance between sparse vectors
|
||||
*/
|
||||
static double
|
||||
l2_distance_squared_internal(SVector * a, SVector * b)
|
||||
{
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
double distance = 0.0;
|
||||
int bpos = 0;
|
||||
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
{
|
||||
int ai = a->indices[i];
|
||||
int bi = -1;
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
{
|
||||
bi = b->indices[j];
|
||||
|
||||
if (ai == bi)
|
||||
{
|
||||
double diff = ax[i] - bx[j];
|
||||
|
||||
distance += diff * diff;
|
||||
}
|
||||
else if (ai > bi)
|
||||
distance += bx[j] * bx[j];
|
||||
|
||||
/* Update start for next iteration */
|
||||
if (ai >= bi)
|
||||
bpos = j + 1;
|
||||
|
||||
/* Found or passed it */
|
||||
if (bi >= ai)
|
||||
break;
|
||||
}
|
||||
|
||||
if (ai != bi)
|
||||
distance += ax[i] * ax[i];
|
||||
}
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
distance += bx[j] * bx[j];
|
||||
|
||||
return distance;
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the L2 distance between sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_l2_distance);
|
||||
Datum
|
||||
svector_l2_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(sqrt(l2_distance_squared_internal(a, b)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the L2 squared distance between sparse vectors
|
||||
* This saves a sqrt calculation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_l2_squared_distance);
|
||||
Datum
|
||||
svector_l2_squared_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(l2_distance_squared_internal(a, b));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the inner product of two sparse vectors
|
||||
*/
|
||||
static double
|
||||
inner_product_internal(SVector * a, SVector * b)
|
||||
{
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
double distance = 0.0;
|
||||
int bpos = 0;
|
||||
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
{
|
||||
int ai = a->indices[i];
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
{
|
||||
int bi = b->indices[j];
|
||||
|
||||
/* Only update when the same index */
|
||||
if (ai == bi)
|
||||
distance += ax[i] * bx[j];
|
||||
|
||||
/* Update start for next iteration */
|
||||
if (ai >= bi)
|
||||
bpos = j + 1;
|
||||
|
||||
/* Found or passed it */
|
||||
if (bi >= ai)
|
||||
break;
|
||||
}
|
||||
}
|
||||
|
||||
return distance;
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the inner product of two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_inner_product);
|
||||
Datum
|
||||
svector_inner_product(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(inner_product_internal(a, b));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the negative inner product of two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_negative_inner_product);
|
||||
Datum
|
||||
svector_negative_inner_product(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(-inner_product_internal(a, b));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the cosine distance between two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_cosine_distance);
|
||||
Datum
|
||||
svector_cosine_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
float norma = 0.0;
|
||||
float normb = 0.0;
|
||||
double similarity;
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
similarity = inner_product_internal(a, b);
|
||||
|
||||
/* Auto-vectorized */
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
norma += ax[i] * ax[i];
|
||||
|
||||
/* Auto-vectorized */
|
||||
for (int i = 0; i < b->nnz; i++)
|
||||
normb += bx[i] * bx[i];
|
||||
|
||||
/* Use sqrt(a * b) over sqrt(a) * sqrt(b) */
|
||||
similarity /= sqrt((double) norma * (double) normb);
|
||||
|
||||
#ifdef _MSC_VER
|
||||
/* /fp:fast may not propagate NaN */
|
||||
if (isnan(similarity))
|
||||
PG_RETURN_FLOAT8(NAN);
|
||||
#endif
|
||||
|
||||
/* Keep in range */
|
||||
if (similarity > 1)
|
||||
similarity = 1.0;
|
||||
else if (similarity < -1)
|
||||
similarity = -1.0;
|
||||
|
||||
PG_RETURN_FLOAT8(1.0 - similarity);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the weighted Jaccard distance between two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_jaccard_distance);
|
||||
Datum
|
||||
svector_jaccard_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
double num = 0.0;
|
||||
double denom = 0.0;
|
||||
int bpos = 0;
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
/*
|
||||
* Weighted Jaccard distance is not defined for vectors with negative
|
||||
* values. Could check and return NaN if minimal impact on performance.
|
||||
*/
|
||||
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
{
|
||||
int ai = a->indices[i];
|
||||
int bi = -1;
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
{
|
||||
bi = b->indices[j];
|
||||
|
||||
if (ai == bi)
|
||||
{
|
||||
num += ax[i] < bx[j] ? ax[i] : bx[j];
|
||||
denom += ax[i] > bx[j] ? ax[i] : bx[j];
|
||||
}
|
||||
else if (ai > bi)
|
||||
denom += bx[j];
|
||||
|
||||
/* Update start for next iteration */
|
||||
if (ai >= bi)
|
||||
bpos = j + 1;
|
||||
|
||||
/* Found or passed it */
|
||||
if (bi >= ai)
|
||||
break;
|
||||
}
|
||||
|
||||
if (ai != bi)
|
||||
denom += ax[i];
|
||||
}
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
denom += bx[j];
|
||||
|
||||
if (denom > 0)
|
||||
PG_RETURN_FLOAT8(1.0 - (num / denom));
|
||||
else
|
||||
PG_RETURN_FLOAT8(NAN);
|
||||
}
|
||||
23
src/svector.h
Normal file
23
src/svector.h
Normal file
@@ -0,0 +1,23 @@
|
||||
#ifndef SVECTOR_H
|
||||
#define SVECTOR_H
|
||||
|
||||
#define SVECTOR_MAX_DIM 100000
|
||||
|
||||
#define SVECTOR_SIZE(_nnz) (offsetof(SVector, indices) + (_nnz) * sizeof(int32) + (_nnz * sizeof(float)))
|
||||
#define SVECTOR_VALUES(x) ((float *) (((char *) (x)) + offsetof(SVector, indices) + (x)->nnz * sizeof(int32)))
|
||||
#define DatumGetSVector(x) ((SVector *) PG_DETOAST_DATUM(x))
|
||||
#define PG_GETARG_SVECTOR_P(x) DatumGetSVector(PG_GETARG_DATUM(x))
|
||||
#define PG_RETURN_SVECTOR_P(x) PG_RETURN_POINTER(x)
|
||||
|
||||
typedef struct SVector
|
||||
{
|
||||
int32 vl_len_; /* varlena header (do not touch directly!) */
|
||||
int32 dim; /* number of dimensions */
|
||||
int32 nnz;
|
||||
int32 unused;
|
||||
int32 indices[FLEXIBLE_ARRAY_MEMBER];
|
||||
} SVector;
|
||||
|
||||
SVector *InitSVector(int dim, int nnz);
|
||||
|
||||
#endif
|
||||
46
src/vector.c
46
src/vector.c
@@ -9,6 +9,7 @@
|
||||
#include "lib/stringinfo.h"
|
||||
#include "libpq/pqformat.h"
|
||||
#include "port.h" /* for strtof() */
|
||||
#include "svector.h"
|
||||
#include "utils/array.h"
|
||||
#include "utils/builtins.h"
|
||||
#include "utils/lsyscache.h"
|
||||
@@ -89,7 +90,7 @@ CheckDim(int dim)
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure finite elements
|
||||
* Ensure finite element
|
||||
*/
|
||||
static inline void
|
||||
CheckElement(float value)
|
||||
@@ -437,17 +438,18 @@ vector_send(PG_FUNCTION_ARGS)
|
||||
|
||||
/*
|
||||
* Convert vector to vector
|
||||
* This is needed to check the type modifier
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(vector);
|
||||
Datum
|
||||
vector(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *arg = PG_GETARG_VECTOR_P(0);
|
||||
Vector *vec = PG_GETARG_VECTOR_P(0);
|
||||
int32 typmod = PG_GETARG_INT32(1);
|
||||
|
||||
CheckExpectedDim(typmod, arg->dim);
|
||||
CheckExpectedDim(typmod, vec->dim);
|
||||
|
||||
PG_RETURN_POINTER(arg);
|
||||
PG_RETURN_POINTER(vec);
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -464,7 +466,6 @@ array_to_vector(PG_FUNCTION_ARGS)
|
||||
bool typbyval;
|
||||
char typalign;
|
||||
Datum *elemsp;
|
||||
bool *nullsp;
|
||||
int nelemsp;
|
||||
|
||||
if (ARR_NDIM(array) > 1)
|
||||
@@ -478,7 +479,7 @@ array_to_vector(PG_FUNCTION_ARGS)
|
||||
errmsg("array must not contain nulls")));
|
||||
|
||||
get_typlenbyvalalign(ARR_ELEMTYPE(array), &typlen, &typbyval, &typalign);
|
||||
deconstruct_array(array, ARR_ELEMTYPE(array), typlen, typbyval, typalign, &elemsp, &nullsp, &nelemsp);
|
||||
deconstruct_array(array, ARR_ELEMTYPE(array), typlen, typbyval, typalign, &elemsp, NULL, &nelemsp);
|
||||
|
||||
CheckDim(nelemsp);
|
||||
CheckExpectedDim(typmod, nelemsp);
|
||||
@@ -512,6 +513,12 @@ array_to_vector(PG_FUNCTION_ARGS)
|
||||
errmsg("unsupported array type")));
|
||||
}
|
||||
|
||||
/*
|
||||
* Free allocation from deconstruct_array. Do not free individual elements
|
||||
* when pass-by-reference since they point to original array.
|
||||
*/
|
||||
pfree(elemsp);
|
||||
|
||||
/* Check elements */
|
||||
for (int i = 0; i < result->dim; i++)
|
||||
CheckElement(result->x[i]);
|
||||
@@ -695,6 +702,8 @@ vector_spherical_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||
float *ax = a->x;
|
||||
float *bx = b->x;
|
||||
float dp = 0.0;
|
||||
double distance;
|
||||
|
||||
@@ -702,7 +711,7 @@ vector_spherical_distance(PG_FUNCTION_ARGS)
|
||||
|
||||
/* Auto-vectorized */
|
||||
for (int i = 0; i < a->dim; i++)
|
||||
dp += a->x[i] * b->x[i];
|
||||
dp += ax[i] * bx[i];
|
||||
|
||||
distance = (double) dp;
|
||||
|
||||
@@ -1143,3 +1152,26 @@ vector_avg(PG_FUNCTION_ARGS)
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert sparse vector to dense vector
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_to_vector);
|
||||
Datum
|
||||
svector_to_vector(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svec = PG_GETARG_SVECTOR_P(0);
|
||||
int32 typmod = PG_GETARG_INT32(1);
|
||||
Vector *result;
|
||||
int dim = svec->dim;
|
||||
float *values = SVECTOR_VALUES(svec);
|
||||
|
||||
CheckDim(dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
result = InitVector(dim);
|
||||
for (int i = 0; i < svec->nnz; i++)
|
||||
result->x[svec->indices[i]] = values[i];
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
@@ -54,79 +54,85 @@ SELECT vector_norm('[3e37,4e37]')::real;
|
||||
5e+37
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('[0,0]', '[3,4]');
|
||||
SELECT l2_distance('[0,0]'::vector, '[3,4]');
|
||||
l2_distance
|
||||
-------------
|
||||
5
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('[0,0]', '[0,1]');
|
||||
SELECT l2_distance('[0,0]'::vector, '[0,1]');
|
||||
l2_distance
|
||||
-------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('[1,2]', '[3]');
|
||||
SELECT l2_distance('[1,2]'::vector, '[3]');
|
||||
ERROR: different vector dimensions 2 and 1
|
||||
SELECT l2_distance('[3e38]', '[-3e38]');
|
||||
SELECT l2_distance('[3e38]'::vector, '[-3e38]');
|
||||
l2_distance
|
||||
-------------
|
||||
Infinity
|
||||
(1 row)
|
||||
|
||||
SELECT inner_product('[1,2]', '[3,4]');
|
||||
SELECT inner_product('[1,2]'::vector, '[3,4]');
|
||||
inner_product
|
||||
---------------
|
||||
11
|
||||
(1 row)
|
||||
|
||||
SELECT inner_product('[1,2]', '[3]');
|
||||
SELECT inner_product('[1,2]'::vector, '[3]');
|
||||
ERROR: different vector dimensions 2 and 1
|
||||
SELECT inner_product('[3e38]', '[3e38]');
|
||||
SELECT inner_product('[3e38]'::vector, '[3e38]');
|
||||
inner_product
|
||||
---------------
|
||||
Infinity
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,2]', '[2,4]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[2,4]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,2]', '[0,0]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[0,0]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,1]', '[1,1]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1,1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,1]', '[-1,-1]');
|
||||
SELECT cosine_distance('[1,0]'::vector, '[0,2]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1,-1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
2
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,2]', '[3]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[3]');
|
||||
ERROR: different vector dimensions 2 and 1
|
||||
SELECT cosine_distance('[1,1]', '[1.1,1.1]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,1]', '[-1.1,-1.1]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
2
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[3e38]', '[3e38]');
|
||||
SELECT cosine_distance('[3e38]'::vector, '[3e38]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
|
||||
140
test/expected/svector.out
Normal file
140
test/expected/svector.out
Normal file
@@ -0,0 +1,140 @@
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector;
|
||||
svector
|
||||
--------------------
|
||||
(0,1.5),(2,3.5)|5|
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector;
|
||||
vector
|
||||
-----------------
|
||||
[1.5,0,3.5,0,0]
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(5);
|
||||
vector
|
||||
-----------------
|
||||
[1.5,0,3.5,0,0]
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(4);
|
||||
ERROR: expected 4 dimensions, not 5
|
||||
SELECT '[0,1.5,0,3.5,0]'::vector::svector;
|
||||
svector
|
||||
--------------------
|
||||
(1,1.5),(3,3.5)|5|
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,0),(1,1),(2,0)|3|'::svector;
|
||||
svector
|
||||
----------------------
|
||||
(0,0),(1,1),(2,0)|3|
|
||||
(1 row)
|
||||
|
||||
SELECT '|5|'::svector;
|
||||
svector
|
||||
---------
|
||||
|5|
|
||||
(1 row)
|
||||
|
||||
SELECT '|-1|'::svector;
|
||||
ERROR: svector must have at least 1 dimension
|
||||
LINE 1: SELECT '|-1|'::svector;
|
||||
^
|
||||
SELECT '|100001|'::svector;
|
||||
ERROR: svector cannot have more than 100000 dimensions
|
||||
LINE 1: SELECT '|100001|'::svector;
|
||||
^
|
||||
SELECT '|16001|'::svector::vector;
|
||||
ERROR: vector cannot have more than 16000 dimensions
|
||||
SELECT '(-1,1)|1|'::svector;
|
||||
ERROR: index must not be negative
|
||||
LINE 1: SELECT '(-1,1)|1|'::svector;
|
||||
^
|
||||
SELECT '(1,1)|1|'::svector;
|
||||
ERROR: index must be less than dimensions
|
||||
LINE 1: SELECT '(1,1)|1|'::svector;
|
||||
^
|
||||
SELECT '|1|'::svector(2);
|
||||
ERROR: expected 2 dimensions, not 1
|
||||
SELECT l2_distance('|2|'::svector, '(0,3),(1,4)|2|');
|
||||
l2_distance
|
||||
-------------
|
||||
5
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('|2|'::svector, '(1,1)|2|');
|
||||
l2_distance
|
||||
-------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT '|2|'::svector <-> '(0,3),(1,4)|2|';
|
||||
?column?
|
||||
----------
|
||||
5
|
||||
(1 row)
|
||||
|
||||
SELECT inner_product('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
inner_product
|
||||
---------------
|
||||
10
|
||||
(1 row)
|
||||
|
||||
SELECT svector_negative_inner_product('(0,1),(1,2)|2|', '(0,2),(1,4)|2|');
|
||||
svector_negative_inner_product
|
||||
--------------------------------
|
||||
-10
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,1)|2|'::svector, '(0,-1),(1,-1)|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
2
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(1,2)|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('|1|'::svector, '|1|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(0,1)|3|');
|
||||
ERROR: different svector dimensions 2 and 3
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|2|');
|
||||
jaccard_distance
|
||||
------------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT jaccard_distance('(0,1)|2|', '(1,1)|2|');
|
||||
jaccard_distance
|
||||
------------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT jaccard_distance('|1|', '|1|');
|
||||
jaccard_distance
|
||||
------------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|3|');
|
||||
ERROR: different svector dimensions 2 and 3
|
||||
@@ -13,23 +13,24 @@ SELECT vector_norm('[3,4]');
|
||||
SELECT vector_norm('[0,1]');
|
||||
SELECT vector_norm('[3e37,4e37]')::real;
|
||||
|
||||
SELECT l2_distance('[0,0]', '[3,4]');
|
||||
SELECT l2_distance('[0,0]', '[0,1]');
|
||||
SELECT l2_distance('[1,2]', '[3]');
|
||||
SELECT l2_distance('[3e38]', '[-3e38]');
|
||||
SELECT l2_distance('[0,0]'::vector, '[3,4]');
|
||||
SELECT l2_distance('[0,0]'::vector, '[0,1]');
|
||||
SELECT l2_distance('[1,2]'::vector, '[3]');
|
||||
SELECT l2_distance('[3e38]'::vector, '[-3e38]');
|
||||
|
||||
SELECT inner_product('[1,2]', '[3,4]');
|
||||
SELECT inner_product('[1,2]', '[3]');
|
||||
SELECT inner_product('[3e38]', '[3e38]');
|
||||
SELECT inner_product('[1,2]'::vector, '[3,4]');
|
||||
SELECT inner_product('[1,2]'::vector, '[3]');
|
||||
SELECT inner_product('[3e38]'::vector, '[3e38]');
|
||||
|
||||
SELECT cosine_distance('[1,2]', '[2,4]');
|
||||
SELECT cosine_distance('[1,2]', '[0,0]');
|
||||
SELECT cosine_distance('[1,1]', '[1,1]');
|
||||
SELECT cosine_distance('[1,1]', '[-1,-1]');
|
||||
SELECT cosine_distance('[1,2]', '[3]');
|
||||
SELECT cosine_distance('[1,1]', '[1.1,1.1]');
|
||||
SELECT cosine_distance('[1,1]', '[-1.1,-1.1]');
|
||||
SELECT cosine_distance('[3e38]', '[3e38]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[2,4]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[0,0]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1,1]');
|
||||
SELECT cosine_distance('[1,0]'::vector, '[0,2]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1,-1]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[3]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]');
|
||||
SELECT cosine_distance('[3e38]'::vector, '[3e38]');
|
||||
|
||||
SELECT l1_distance('[0,0]', '[3,4]');
|
||||
SELECT l1_distance('[0,0]', '[0,1]');
|
||||
|
||||
36
test/sql/svector.sql
Normal file
36
test/sql/svector.sql
Normal file
@@ -0,0 +1,36 @@
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector;
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector;
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(5);
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(4);
|
||||
SELECT '[0,1.5,0,3.5,0]'::vector::svector;
|
||||
|
||||
SELECT '(0,0),(1,1),(2,0)|3|'::svector;
|
||||
|
||||
SELECT '|5|'::svector;
|
||||
SELECT '|-1|'::svector;
|
||||
SELECT '|100001|'::svector;
|
||||
SELECT '|16001|'::svector::vector;
|
||||
|
||||
SELECT '(-1,1)|1|'::svector;
|
||||
SELECT '(1,1)|1|'::svector;
|
||||
|
||||
SELECT '|1|'::svector(2);
|
||||
|
||||
SELECT l2_distance('|2|'::svector, '(0,3),(1,4)|2|');
|
||||
SELECT l2_distance('|2|'::svector, '(1,1)|2|');
|
||||
SELECT '|2|'::svector <-> '(0,3),(1,4)|2|';
|
||||
|
||||
SELECT inner_product('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
SELECT svector_negative_inner_product('(0,1),(1,2)|2|', '(0,2),(1,4)|2|');
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '|2|');
|
||||
SELECT cosine_distance('(0,1),(1,1)|2|'::svector, '(0,-1),(1,-1)|2|');
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(1,2)|2|');
|
||||
SELECT cosine_distance('|1|'::svector, '|1|');
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(0,1)|3|');
|
||||
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|2|');
|
||||
SELECT jaccard_distance('(0,1)|2|', '(1,1)|2|');
|
||||
SELECT jaccard_distance('|1|', '|1|');
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|3|');
|
||||
@@ -19,8 +19,6 @@ sub test_index_replay
|
||||
|
||||
# Wait for replica to catch up
|
||||
my $applname = $node_replica->name;
|
||||
|
||||
my $server_version_num = $node_primary->safe_psql("postgres", "SHOW server_version_num");
|
||||
my $caughtup_query = "SELECT pg_current_wal_lsn() <= replay_lsn FROM pg_stat_replication WHERE application_name = '$applname';";
|
||||
$node_primary->poll_query_until('postgres', $caughtup_query)
|
||||
or die "Timed out while waiting for replica 1 to catch up";
|
||||
|
||||
@@ -94,7 +94,7 @@ for my $i (0 .. $#operators)
|
||||
# Test approximate results
|
||||
if ($operator ne "<#>")
|
||||
{
|
||||
# TODO fix test
|
||||
# TODO Fix test (uniform random vectors all have similar inner product)
|
||||
test_recall(1, 0.71, $operator);
|
||||
test_recall(10, 0.95, $operator);
|
||||
}
|
||||
@@ -115,7 +115,7 @@ for my $i (0 .. $#operators)
|
||||
# Test approximate results
|
||||
if ($operator ne "<#>")
|
||||
{
|
||||
# TODO fix test
|
||||
# TODO Fix test (uniform random vectors all have similar inner product)
|
||||
test_recall(1, 0.71, $operator);
|
||||
test_recall(10, 0.95, $operator);
|
||||
}
|
||||
@@ -19,8 +19,6 @@ sub test_index_replay
|
||||
|
||||
# Wait for replica to catch up
|
||||
my $applname = $node_replica->name;
|
||||
|
||||
my $server_version_num = $node_primary->safe_psql("postgres", "SHOW server_version_num");
|
||||
my $caughtup_query = "SELECT pg_current_wal_lsn() <= replay_lsn FROM pg_stat_replication WHERE application_name = '$applname';";
|
||||
$node_primary->poll_query_until('postgres', $caughtup_query)
|
||||
or die "Timed out while waiting for replica 1 to catch up";
|
||||
|
||||
@@ -89,7 +89,7 @@ foreach (@queries)
|
||||
test_recall(0.20, $limit, "before vacuum");
|
||||
test_recall(0.95, 100, "before vacuum");
|
||||
|
||||
# TODO test concurrent inserts with vacuum
|
||||
# TODO Test concurrent inserts with vacuum
|
||||
$node->safe_psql("postgres", "VACUUM tst;");
|
||||
|
||||
test_recall(0.95, $limit, "after vacuum");
|
||||
|
||||
117
test/t/017_ivfflat_insert_recall.pl
Normal file
117
test/t/017_ivfflat_insert_recall.pl
Normal file
@@ -0,0 +1,117 @@
|
||||
use strict;
|
||||
use warnings;
|
||||
use PostgresNode;
|
||||
use TestLib;
|
||||
use Test::More;
|
||||
|
||||
my $node;
|
||||
my @queries = ();
|
||||
my @expected;
|
||||
my $limit = 20;
|
||||
|
||||
sub test_recall
|
||||
{
|
||||
my ($probes, $min, $operator) = @_;
|
||||
my $correct = 0;
|
||||
my $total = 0;
|
||||
|
||||
my $explain = $node->safe_psql("postgres", qq(
|
||||
SET enable_seqscan = off;
|
||||
SET ivfflat.probes = $probes;
|
||||
EXPLAIN ANALYZE SELECT i FROM tst ORDER BY v $operator '$queries[0]' LIMIT $limit;
|
||||
));
|
||||
like($explain, qr/Index Scan using idx on tst/);
|
||||
|
||||
for my $i (0 .. $#queries)
|
||||
{
|
||||
my $actual = $node->safe_psql("postgres", qq(
|
||||
SET enable_seqscan = off;
|
||||
SET ivfflat.probes = $probes;
|
||||
SELECT i FROM tst ORDER BY v $operator '$queries[$i]' LIMIT $limit;
|
||||
));
|
||||
my @actual_ids = split("\n", $actual);
|
||||
my %actual_set = map { $_ => 1 } @actual_ids;
|
||||
|
||||
my @expected_ids = split("\n", $expected[$i]);
|
||||
|
||||
foreach (@expected_ids)
|
||||
{
|
||||
if (exists($actual_set{$_}))
|
||||
{
|
||||
$correct++;
|
||||
}
|
||||
$total++;
|
||||
}
|
||||
}
|
||||
|
||||
cmp_ok($correct / $total, ">=", $min, $operator);
|
||||
}
|
||||
|
||||
# Initialize node
|
||||
$node = get_new_node('node');
|
||||
$node->init;
|
||||
$node->start;
|
||||
|
||||
# Create table
|
||||
$node->safe_psql("postgres", "CREATE EXTENSION vector;");
|
||||
$node->safe_psql("postgres", "CREATE TABLE tst (i serial, v vector(3));");
|
||||
|
||||
# Generate queries
|
||||
for (1 .. 20)
|
||||
{
|
||||
my $r1 = rand();
|
||||
my $r2 = rand();
|
||||
my $r3 = rand();
|
||||
push(@queries, "[$r1,$r2,$r3]");
|
||||
}
|
||||
|
||||
# Check each index type
|
||||
my @operators = ("<->", "<#>", "<=>");
|
||||
my @opclasses = ("vector_l2_ops", "vector_ip_ops", "vector_cosine_ops");
|
||||
|
||||
for my $i (0 .. $#operators)
|
||||
{
|
||||
my $operator = $operators[$i];
|
||||
my $opclass = $opclasses[$i];
|
||||
|
||||
# Add index
|
||||
$node->safe_psql("postgres", "CREATE INDEX idx ON tst USING ivfflat (v $opclass);");
|
||||
|
||||
# Use concurrent inserts
|
||||
$node->pgbench(
|
||||
"--no-vacuum --client=10 --transactions=1000",
|
||||
0,
|
||||
[qr{actually processed}],
|
||||
[qr{^$}],
|
||||
"concurrent INSERTs",
|
||||
{
|
||||
"017_ivfflat_insert_recall_$opclass" => "INSERT INTO tst (v) SELECT ARRAY[random(), random(), random()] FROM generate_series(1, 10) i;"
|
||||
}
|
||||
);
|
||||
|
||||
# Get exact results
|
||||
@expected = ();
|
||||
foreach (@queries)
|
||||
{
|
||||
my $res = $node->safe_psql("postgres", qq(
|
||||
SET enable_indexscan = off;
|
||||
SELECT i FROM tst ORDER BY v $operator '$_' LIMIT $limit;
|
||||
));
|
||||
push(@expected, $res);
|
||||
}
|
||||
|
||||
# Test approximate results
|
||||
if ($operator ne "<#>")
|
||||
{
|
||||
# TODO Fix test (uniform random vectors all have similar inner product)
|
||||
test_recall(1, 0.71, $operator);
|
||||
test_recall(10, 0.95, $operator);
|
||||
}
|
||||
# Account for equal distances
|
||||
test_recall(100, 0.9925, $operator);
|
||||
|
||||
$node->safe_psql("postgres", "DROP INDEX idx;");
|
||||
$node->safe_psql("postgres", "TRUNCATE tst;");
|
||||
}
|
||||
|
||||
done_testing();
|
||||
43
test/t/018_ivfflat_deletes.pl
Normal file
43
test/t/018_ivfflat_deletes.pl
Normal file
@@ -0,0 +1,43 @@
|
||||
use strict;
|
||||
use warnings;
|
||||
use PostgresNode;
|
||||
use TestLib;
|
||||
use Test::More;
|
||||
|
||||
my $dim = 3;
|
||||
|
||||
my $array_sql = join(",", ('random()') x $dim);
|
||||
|
||||
# Initialize node
|
||||
my $node = get_new_node('node');
|
||||
$node->init;
|
||||
$node->start;
|
||||
|
||||
# Create table and index
|
||||
$node->safe_psql("postgres", "CREATE EXTENSION vector;");
|
||||
$node->safe_psql("postgres", "CREATE TABLE tst (i serial, v vector($dim));");
|
||||
$node->safe_psql("postgres",
|
||||
"INSERT INTO tst (v) SELECT ARRAY[$array_sql] FROM generate_series(1, 10000) i;"
|
||||
);
|
||||
$node->safe_psql("postgres", "CREATE INDEX ON tst USING ivfflat (v vector_l2_ops);");
|
||||
|
||||
# Delete data
|
||||
$node->safe_psql("postgres", "DELETE FROM tst WHERE i % 100 != 0;");
|
||||
|
||||
my $exp = $node->safe_psql("postgres", qq(
|
||||
SET enable_indexscan = off;
|
||||
SELECT i FROM tst ORDER BY v <-> '[0,0,0]';
|
||||
));
|
||||
|
||||
# Run twice to make sure correct tuples marked as dead
|
||||
for (1 .. 2)
|
||||
{
|
||||
my $res = $node->safe_psql("postgres", qq(
|
||||
SET enable_seqscan = off;
|
||||
SET ivfflat.probes = 100;
|
||||
SELECT i FROM tst ORDER BY v <-> '[0,0,0]';
|
||||
));
|
||||
is($res, $exp);
|
||||
}
|
||||
|
||||
done_testing();
|
||||
@@ -1,4 +1,4 @@
|
||||
comment = 'vector data type and ivfflat access method'
|
||||
default_version = '0.5.0'
|
||||
comment = 'vector data type and ivfflat and hnsw access methods'
|
||||
default_version = '0.5.1'
|
||||
module_pathname = '$libdir/vector'
|
||||
relocatable = true
|
||||
|
||||
Reference in New Issue
Block a user