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Author SHA1 Message Date
Andrew Kane
ad71bba602 Removed index page pinning for HNSW 2023-09-07 15:48:22 -07:00
23 changed files with 161 additions and 759 deletions

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@@ -1,7 +1,7 @@
## 0.5.1 (unreleased) ## 0.5.1 (unreleased)
- Added check for MVCC-compliant snapshot for HNSW index scans
- Improved performance of index scans for IVFFlat after updates and deletes - Improved performance of index scans for IVFFlat after updates and deletes
- Fixed locking for index scans for HNSW
## 0.5.0 (2023-08-28) ## 0.5.0 (2023-08-28)

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@@ -3,8 +3,8 @@ EXTVERSION = 0.5.0
MODULE_big = vector MODULE_big = vector
DATA = $(wildcard sql/*--*.sql) DATA = $(wildcard sql/*--*.sql)
OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/tinyint.o src/vector.o OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/vector.o
HEADERS = src/tinyint.h src/vector.h HEADERS = src/vector.h
TESTS = $(wildcard test/sql/*.sql) TESTS = $(wildcard test/sql/*.sql)
REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS)) REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS))

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@@ -1,8 +1,8 @@
EXTENSION = vector EXTENSION = vector
EXTVERSION = 0.5.0 EXTVERSION = 0.5.0
OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\tinyint.obj src\vector.obj OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\vector.obj
HEADERS = src\tinyint.h src\vector.h HEADERS = src\vector.h
REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged
REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION) REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)
@@ -56,7 +56,7 @@ install:
copy $(EXTENSION).control "$(SHAREDIR)\extension" copy $(EXTENSION).control "$(SHAREDIR)\extension"
copy sql\$(EXTENSION)--*.sql "$(SHAREDIR)\extension" copy sql\$(EXTENSION)--*.sql "$(SHAREDIR)\extension"
mkdir "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)" mkdir "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
for %f in ($(HEADERS)) do copy %f "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)" copy $(HEADERS) "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
installcheck: installcheck:
"$(BINDIR)\pg_regress" --bindir="$(BINDIR)" $(REGRESS_OPTS) $(REGRESS) "$(BINDIR)\pg_regress" --bindir="$(BINDIR)" $(REGRESS_OPTS) $(REGRESS)

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@@ -1,67 +0,0 @@
-- complain if script is sourced in psql, rather than via CREATE EXTENSION
\echo Use "ALTER EXTENSION vector UPDATE TO '0.5.1'" to load this file. \quit
-- tinyint
CREATE TYPE tinyint;
CREATE FUNCTION tinyint_in(cstring, oid, integer) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_out(tinyint) RETURNS cstring
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_recv(internal, oid, integer) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_send(tinyint) RETURNS bytea
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE TYPE tinyint (
INPUT = tinyint_in,
OUTPUT = tinyint_out,
RECEIVE = tinyint_recv,
SEND = tinyint_send,
INTERNALLENGTH = 1,
PASSEDBYVALUE,
ALIGNMENT = char
);
CREATE FUNCTION integer_to_tinyint(integer, integer, boolean) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION numeric_to_tinyint(numeric, integer, boolean) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE CAST (integer AS tinyint)
WITH FUNCTION integer_to_tinyint(integer, integer, boolean) AS IMPLICIT;
CREATE CAST (numeric AS tinyint)
WITH FUNCTION numeric_to_tinyint(numeric, integer, boolean) AS IMPLICIT;
CREATE FUNCTION l2_distance(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION inner_product(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION cosine_distance(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_negative_inner_product(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE OPERATOR <-> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = l2_distance,
COMMUTATOR = '<->'
);
CREATE OPERATOR <#> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = tinyint_negative_inner_product,
COMMUTATOR = '<#>'
);
CREATE OPERATOR <=> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = cosine_distance,
COMMUTATOR = '<=>'
);

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@@ -290,68 +290,3 @@ CREATE OPERATOR CLASS vector_cosine_ops
OPERATOR 1 <=> (vector, vector) FOR ORDER BY float_ops, OPERATOR 1 <=> (vector, vector) FOR ORDER BY float_ops,
FUNCTION 1 vector_negative_inner_product(vector, vector), FUNCTION 1 vector_negative_inner_product(vector, vector),
FUNCTION 2 vector_norm(vector); FUNCTION 2 vector_norm(vector);
-- tinyint
CREATE TYPE tinyint;
CREATE FUNCTION tinyint_in(cstring, oid, integer) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_out(tinyint) RETURNS cstring
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_recv(internal, oid, integer) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_send(tinyint) RETURNS bytea
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE TYPE tinyint (
INPUT = tinyint_in,
OUTPUT = tinyint_out,
RECEIVE = tinyint_recv,
SEND = tinyint_send,
INTERNALLENGTH = 1,
PASSEDBYVALUE,
ALIGNMENT = char
);
CREATE FUNCTION integer_to_tinyint(integer, integer, boolean) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION numeric_to_tinyint(numeric, integer, boolean) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE CAST (integer AS tinyint)
WITH FUNCTION integer_to_tinyint(integer, integer, boolean) AS IMPLICIT;
CREATE CAST (numeric AS tinyint)
WITH FUNCTION numeric_to_tinyint(numeric, integer, boolean) AS IMPLICIT;
CREATE FUNCTION l2_distance(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION inner_product(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION cosine_distance(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_negative_inner_product(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE OPERATOR <-> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = l2_distance,
COMMUTATOR = '<->'
);
CREATE OPERATOR <#> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = tinyint_negative_inner_product,
COMMUTATOR = '<#>'
);
CREATE OPERATOR <=> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = cosine_distance,
COMMUTATOR = '<=>'
);

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@@ -57,8 +57,6 @@
/* PROGRESS_CREATEIDX_SUBPHASE_INITIALIZE is 1 */ /* PROGRESS_CREATEIDX_SUBPHASE_INITIALIZE is 1 */
#define PROGRESS_HNSW_PHASE_LOAD 2 #define PROGRESS_HNSW_PHASE_LOAD 2
#define HNSW_MAX_SIZE (BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - sizeof(ItemIdData))
#define HNSW_ELEMENT_TUPLE_SIZE(_dim) MAXALIGN(offsetof(HnswElementTupleData, vec) + VECTOR_SIZE(_dim)) #define HNSW_ELEMENT_TUPLE_SIZE(_dim) MAXALIGN(offsetof(HnswElementTupleData, vec) + VECTOR_SIZE(_dim))
#define HNSW_NEIGHBOR_TUPLE_SIZE(level, m) MAXALIGN(offsetof(HnswNeighborTupleData, indextids) + ((level) + 2) * (m) * sizeof(ItemPointerData)) #define HNSW_NEIGHBOR_TUPLE_SIZE(level, m) MAXALIGN(offsetof(HnswNeighborTupleData, indextids) + ((level) + 2) * (m) * sizeof(ItemPointerData))
@@ -260,7 +258,7 @@ typedef struct HnswVacuumState
/* Methods */ /* Methods */
int HnswGetM(Relation index); int HnswGetM(Relation index);
int HnswGetEfConstruction(Relation index); int HnswGetEfConstruction(Relation index);
FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum); FmgrInfo *HnswOptionalProcInfo(Relation rel, uint16 procnum);
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result); bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
void HnswCommitBuffer(Buffer buf, GenericXLogState *state); void HnswCommitBuffer(Buffer buf, GenericXLogState *state);
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum); Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);

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@@ -81,6 +81,7 @@ HnswBuildAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **
HnswPageGetOpaque(*page)->nextblkno = BufferGetBlockNumber(newbuf); HnswPageGetOpaque(*page)->nextblkno = BufferGetBlockNumber(newbuf);
/* Commit */ /* Commit */
MarkBufferDirty(*buf);
GenericXLogFinish(*state); GenericXLogFinish(*state);
UnlockReleaseBuffer(*buf); UnlockReleaseBuffer(*buf);
@@ -117,12 +118,12 @@ CreateElementPages(HnswBuildState * buildstate)
ListCell *lc; ListCell *lc;
/* Calculate sizes */ /* Calculate sizes */
maxSize = HNSW_MAX_SIZE; maxSize = BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData));
etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions); etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions);
/* Allocate once */ /* Allocate once */
etup = palloc0(etupSize); etup = palloc0(etupSize);
ntup = palloc0(BLCKSZ); ntup = palloc0(maxSize);
/* Prepare first page */ /* Prepare first page */
buf = HnswNewBuffer(index, forkNum); buf = HnswNewBuffer(index, forkNum);
@@ -178,6 +179,7 @@ CreateElementPages(HnswBuildState * buildstate)
insertPage = BufferGetBlockNumber(buf); insertPage = BufferGetBlockNumber(buf);
/* Commit */ /* Commit */
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
UnlockReleaseBuffer(buf); UnlockReleaseBuffer(buf);
@@ -225,6 +227,7 @@ CreateNeighborPages(HnswBuildState * buildstate)
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index)); elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */ /* Commit */
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
UnlockReleaseBuffer(buf); UnlockReleaseBuffer(buf);
} }

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@@ -135,7 +135,7 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions); etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions);
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m); ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m);
combinedSize = etupSize + ntupSize + sizeof(ItemIdData); combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
maxSize = HNSW_MAX_SIZE; maxSize = BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData));
minCombinedSize = etupSize + HNSW_NEIGHBOR_TUPLE_SIZE(0, m) + sizeof(ItemIdData); minCombinedSize = etupSize + HNSW_NEIGHBOR_TUPLE_SIZE(0, m) + sizeof(ItemIdData);
/* Prepare element tuple */ /* Prepare element tuple */
@@ -202,6 +202,8 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
HnswInsertAppendPage(index, &newbuf, &newpage, state, page); HnswInsertAppendPage(index, &newbuf, &newpage, state, page);
/* Commit */ /* Commit */
MarkBufferDirty(newbuf);
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
/* Unlock previous buffer */ /* Unlock previous buffer */
@@ -268,6 +270,9 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
} }
/* Commit */ /* Commit */
MarkBufferDirty(buf);
if (nbuf != buf)
MarkBufferDirty(nbuf);
GenericXLogFinish(state); GenericXLogFinish(state);
UnlockReleaseBuffer(buf); UnlockReleaseBuffer(buf);
if (nbuf != buf) if (nbuf != buf)
@@ -386,6 +391,7 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index)); elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */ /* Commit */
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
} }
else else
@@ -439,6 +445,7 @@ HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index)); elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */ /* Commit */
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
UnlockReleaseBuffer(buf); UnlockReleaseBuffer(buf);

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@@ -113,6 +113,12 @@ hnswbeginscan(Relation index, int nkeys, int norderbys)
scan->opaque = so; scan->opaque = so;
/*
* Get a shared lock. This allows vacuum to ensure no in-flight scans
* before marking tuples as deleted.
*/
LockPage(scan->indexRelation, HNSW_SCAN_LOCK, ShareLock);
return scan; return scan;
} }
@@ -160,25 +166,11 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
if (scan->orderByData == NULL) if (scan->orderByData == NULL)
elog(ERROR, "cannot scan hnsw index without order"); elog(ERROR, "cannot scan hnsw index without order");
/* Requires MVCC-compliant snapshot as not able to maintain a pin */
/* https://www.postgresql.org/docs/current/index-locking.html */
if (!IsMVCCSnapshot(scan->xs_snapshot))
elog(ERROR, "non-MVCC snapshots are not supported with hnsw");
/* Get scan value */ /* Get scan value */
value = GetScanValue(scan); value = GetScanValue(scan);
/*
* Get a shared lock. This allows vacuum to ensure no in-flight scans
* before marking tuples as deleted.
*/
LockPage(scan->indexRelation, HNSW_SCAN_LOCK, ShareLock);
so->w = GetScanItems(scan, value); so->w = GetScanItems(scan, value);
/* Release shared lock */
UnlockPage(scan->indexRelation, HNSW_SCAN_LOCK, ShareLock);
so->first = false; so->first = false;
} }
@@ -206,6 +198,15 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
scan->xs_ctup.t_self = *heaptid; scan->xs_ctup.t_self = *heaptid;
#endif #endif
/*
* Typically, an index scan must maintain a pin on the index page
* holding the item last returned by amgettuple. However, this is not
* needed with the current vacuum strategy, which ensures scans do not
* visit tuples in danger of being marked as deleted.
*
* https://www.postgresql.org/docs/current/index-locking.html
*/
scan->xs_recheckorderby = false; scan->xs_recheckorderby = false;
return true; return true;
} }
@@ -222,6 +223,9 @@ hnswendscan(IndexScanDesc scan)
{ {
HnswScanOpaque so = (HnswScanOpaque) scan->opaque; HnswScanOpaque so = (HnswScanOpaque) scan->opaque;
/* Release shared lock */
UnlockPage(scan->indexRelation, HNSW_SCAN_LOCK, ShareLock);
MemoryContextDelete(so->tmpCtx); MemoryContextDelete(so->tmpCtx);
pfree(so); pfree(so);

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@@ -38,12 +38,12 @@ HnswGetEfConstruction(Relation index)
* Get proc * Get proc
*/ */
FmgrInfo * FmgrInfo *
HnswOptionalProcInfo(Relation index, uint16 procnum) HnswOptionalProcInfo(Relation rel, uint16 procnum)
{ {
if (!OidIsValid(index_getprocid(index, 1, procnum))) if (!OidIsValid(index_getprocid(rel, 1, procnum)))
return NULL; return NULL;
return index_getprocinfo(index, 1, procnum); return index_getprocinfo(rel, 1, procnum);
} }
/* /*
@@ -117,6 +117,7 @@ HnswInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogState *
void void
HnswCommitBuffer(Buffer buf, GenericXLogState *state) HnswCommitBuffer(Buffer buf, GenericXLogState *state)
{ {
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
UnlockReleaseBuffer(buf); UnlockReleaseBuffer(buf);
} }
@@ -142,17 +143,6 @@ HnswInitNeighbors(HnswElement element, int m)
} }
} }
/*
* Free neighbors
*/
static void
HnswFreeNeighbors(HnswElement element)
{
for (int lc = 0; lc <= element->level; lc++)
pfree(element->neighbors[lc].items);
pfree(element->neighbors);
}
/* /*
* Allocate an element * Allocate an element
*/ */
@@ -184,8 +174,10 @@ HnswInitElement(ItemPointer heaptid, int m, double ml, int maxLevel)
void void
HnswFreeElement(HnswElement element) HnswFreeElement(HnswElement element)
{ {
HnswFreeNeighbors(element);
list_free_deep(element->heaptids); list_free_deep(element->heaptids);
for (int lc = 0; lc <= element->level; lc++)
pfree(element->neighbors[lc].items);
pfree(element->neighbors);
pfree(element->vec); pfree(element->vec);
pfree(element); pfree(element);
} }

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@@ -128,7 +128,10 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
blkno = HnswPageGetOpaque(page)->nextblkno; blkno = HnswPageGetOpaque(page)->nextblkno;
if (updated) if (updated)
{
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
}
else else
GenericXLogAbort(state); GenericXLogAbort(state);
@@ -226,6 +229,7 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index)); elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */ /* Commit */
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
UnlockReleaseBuffer(buf); UnlockReleaseBuffer(buf);
@@ -543,6 +547,9 @@ MarkDeleted(HnswVacuumState * vacuumstate)
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index)); elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Commit */ /* Commit */
MarkBufferDirty(buf);
if (nbuf != buf)
MarkBufferDirty(nbuf);
GenericXLogFinish(state); GenericXLogFinish(state);
if (nbuf != buf) if (nbuf != buf)
UnlockReleaseBuffer(nbuf); UnlockReleaseBuffer(nbuf);

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@@ -506,30 +506,29 @@ CreateListPages(Relation index, VectorArray centers, int dimensions,
Buffer buf; Buffer buf;
Page page; Page page;
GenericXLogState *state; GenericXLogState *state;
Size listSize; OffsetNumber offno;
Size itemsz;
IvfflatList list; IvfflatList list;
listSize = MAXALIGN(IVFFLAT_LIST_SIZE(dimensions)); itemsz = MAXALIGN(IVFFLAT_LIST_SIZE(dimensions));
list = palloc(listSize); list = palloc(itemsz);
buf = IvfflatNewBuffer(index, forkNum); buf = IvfflatNewBuffer(index, forkNum);
IvfflatInitRegisterPage(index, &buf, &page, &state); IvfflatInitRegisterPage(index, &buf, &page, &state);
for (int i = 0; i < lists; i++) for (int i = 0; i < lists; i++)
{ {
OffsetNumber offno;
/* Load list */ /* Load list */
list->startPage = InvalidBlockNumber; list->startPage = InvalidBlockNumber;
list->insertPage = InvalidBlockNumber; list->insertPage = InvalidBlockNumber;
memcpy(&list->center, VectorArrayGet(centers, i), VECTOR_SIZE(dimensions)); memcpy(&list->center, VectorArrayGet(centers, i), VECTOR_SIZE(dimensions));
/* Ensure free space */ /* Ensure free space */
if (PageGetFreeSpace(page) < listSize) if (PageGetFreeSpace(page) < itemsz)
IvfflatAppendPage(index, &buf, &page, &state, forkNum); IvfflatAppendPage(index, &buf, &page, &state, forkNum);
/* Add the item */ /* Add the item */
offno = PageAddItem(page, (Item) list, listSize, InvalidOffsetNumber, false, false); offno = PageAddItem(page, (Item) list, itemsz, InvalidOffsetNumber, false, false);
if (offno == InvalidOffsetNumber) if (offno == InvalidOffsetNumber)
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index)); elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));

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@@ -277,7 +277,7 @@ VectorArray VectorArrayInit(int maxlen, int dimensions);
void VectorArrayFree(VectorArray arr); void VectorArrayFree(VectorArray arr);
void PrintVectorArray(char *msg, VectorArray arr); void PrintVectorArray(char *msg, VectorArray arr);
void IvfflatKmeans(Relation index, VectorArray samples, VectorArray centers); void IvfflatKmeans(Relation index, VectorArray samples, VectorArray centers);
FmgrInfo *IvfflatOptionalProcInfo(Relation index, uint16 procnum); FmgrInfo *IvfflatOptionalProcInfo(Relation rel, uint16 procnum);
bool IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result); bool IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
int IvfflatGetLists(Relation index); int IvfflatGetLists(Relation index);
void IvfflatGetMetaPageInfo(Relation index, int *lists, int *dimensions); void IvfflatGetMetaPageInfo(Relation index, int *lists, int *dimensions);

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@@ -11,37 +11,36 @@
* Find the list that minimizes the distance function * Find the list that minimizes the distance function
*/ */
static void static void
FindInsertPage(Relation index, Datum *values, BlockNumber *insertPage, ListInfo * listInfo) FindInsertPage(Relation rel, Datum *values, BlockNumber *insertPage, ListInfo * listInfo)
{ {
Buffer cbuf;
Page cpage;
IvfflatList list;
double distance;
double minDistance = DBL_MAX; double minDistance = DBL_MAX;
BlockNumber nextblkno = IVFFLAT_HEAD_BLKNO; BlockNumber nextblkno = IVFFLAT_HEAD_BLKNO;
FmgrInfo *procinfo; FmgrInfo *procinfo;
Oid collation; Oid collation;
OffsetNumber offno;
OffsetNumber maxoffno;
/* Avoid compiler warning */ /* Avoid compiler warning */
listInfo->blkno = nextblkno; listInfo->blkno = nextblkno;
listInfo->offno = FirstOffsetNumber; listInfo->offno = FirstOffsetNumber;
procinfo = index_getprocinfo(index, 1, IVFFLAT_DISTANCE_PROC); procinfo = index_getprocinfo(rel, 1, IVFFLAT_DISTANCE_PROC);
collation = index->rd_indcollation[0]; collation = rel->rd_indcollation[0];
/* Search all list pages */ /* Search all list pages */
while (BlockNumberIsValid(nextblkno)) while (BlockNumberIsValid(nextblkno))
{ {
Buffer cbuf; cbuf = ReadBuffer(rel, nextblkno);
Page cpage;
OffsetNumber maxoffno;
cbuf = ReadBuffer(index, nextblkno);
LockBuffer(cbuf, BUFFER_LOCK_SHARE); LockBuffer(cbuf, BUFFER_LOCK_SHARE);
cpage = BufferGetPage(cbuf); cpage = BufferGetPage(cbuf);
maxoffno = PageGetMaxOffsetNumber(cpage); maxoffno = PageGetMaxOffsetNumber(cpage);
for (OffsetNumber offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno)) for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
{ {
IvfflatList list;
double distance;
list = (IvfflatList) PageGetItem(cpage, PageGetItemId(cpage, offno)); list = (IvfflatList) PageGetItem(cpage, PageGetItemId(cpage, offno));
distance = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, values[0], PointerGetDatum(&list->center))); distance = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, values[0], PointerGetDatum(&list->center)));
@@ -64,7 +63,7 @@ FindInsertPage(Relation index, Datum *values, BlockNumber *insertPage, ListInfo
* Insert a tuple into the index * Insert a tuple into the index
*/ */
static void static void
InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel) InsertTuple(Relation rel, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel)
{ {
IndexTuple itup; IndexTuple itup;
Datum value; Datum value;
@@ -81,33 +80,33 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, R
value = PointerGetDatum(PG_DETOAST_DATUM(values[0])); value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
/* Normalize if needed */ /* Normalize if needed */
normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_NORM_PROC); normprocinfo = IvfflatOptionalProcInfo(rel, IVFFLAT_NORM_PROC);
if (normprocinfo != NULL) if (normprocinfo != NULL)
{ {
if (!IvfflatNormValue(normprocinfo, index->rd_indcollation[0], &value, NULL)) if (!IvfflatNormValue(normprocinfo, rel->rd_indcollation[0], &value, NULL))
return; return;
} }
/* Find the insert page - sets the page and list info */ /* Find the insert page - sets the page and list info */
FindInsertPage(index, values, &insertPage, &listInfo); FindInsertPage(rel, values, &insertPage, &listInfo);
Assert(BlockNumberIsValid(insertPage)); Assert(BlockNumberIsValid(insertPage));
originalInsertPage = insertPage; originalInsertPage = insertPage;
/* Form tuple */ /* Form tuple */
itup = index_form_tuple(RelationGetDescr(index), &value, isnull); itup = index_form_tuple(RelationGetDescr(rel), &value, isnull);
itup->t_tid = *heap_tid; itup->t_tid = *heap_tid;
/* Get tuple size */ /* Get tuple size */
itemsz = MAXALIGN(IndexTupleSize(itup)); itemsz = MAXALIGN(IndexTupleSize(itup));
Assert(itemsz <= BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(IvfflatPageOpaqueData)) - sizeof(ItemIdData)); Assert(itemsz <= BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(IvfflatPageOpaqueData)));
/* Find a page to insert the item */ /* Find a page to insert the item */
for (;;) for (;;)
{ {
buf = ReadBuffer(index, insertPage); buf = ReadBuffer(rel, insertPage);
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE); LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
state = GenericXLogStart(index); state = GenericXLogStart(rel);
page = GenericXLogRegisterBuffer(state, buf, 0); page = GenericXLogRegisterBuffer(state, buf, 0);
if (PageGetFreeSpace(page) >= itemsz) if (PageGetFreeSpace(page) >= itemsz)
@@ -127,9 +126,9 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, R
Page newpage; Page newpage;
/* Add a new page */ /* Add a new page */
LockRelationForExtension(index, ExclusiveLock); LockRelationForExtension(rel, ExclusiveLock);
newbuf = IvfflatNewBuffer(index, MAIN_FORKNUM); newbuf = IvfflatNewBuffer(rel, MAIN_FORKNUM);
UnlockRelationForExtension(index, ExclusiveLock); UnlockRelationForExtension(rel, ExclusiveLock);
/* Init new page */ /* Init new page */
newpage = GenericXLogRegisterBuffer(state, newbuf, GENERIC_XLOG_FULL_IMAGE); newpage = GenericXLogRegisterBuffer(state, newbuf, GENERIC_XLOG_FULL_IMAGE);
@@ -142,13 +141,15 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, R
IvfflatPageGetOpaque(page)->nextblkno = insertPage; IvfflatPageGetOpaque(page)->nextblkno = insertPage;
/* Commit */ /* Commit */
MarkBufferDirty(newbuf);
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
/* Unlock previous buffer */ /* Unlock previous buffer */
UnlockReleaseBuffer(buf); UnlockReleaseBuffer(buf);
/* Prepare new buffer */ /* Prepare new buffer */
state = GenericXLogStart(index); state = GenericXLogStart(rel);
buf = newbuf; buf = newbuf;
page = GenericXLogRegisterBuffer(state, buf, 0); page = GenericXLogRegisterBuffer(state, buf, 0);
break; break;
@@ -157,13 +158,13 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, R
/* Add to next offset */ /* Add to next offset */
if (PageAddItem(page, (Item) itup, itemsz, InvalidOffsetNumber, false, false) == InvalidOffsetNumber) if (PageAddItem(page, (Item) itup, itemsz, InvalidOffsetNumber, false, false) == InvalidOffsetNumber)
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index)); elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(rel));
IvfflatCommitBuffer(buf, state); IvfflatCommitBuffer(buf, state);
/* Update the insert page */ /* Update the insert page */
if (insertPage != originalInsertPage) if (insertPage != originalInsertPage)
IvfflatUpdateList(index, listInfo, insertPage, originalInsertPage, InvalidBlockNumber, MAIN_FORKNUM); IvfflatUpdateList(rel, listInfo, insertPage, originalInsertPage, InvalidBlockNumber, MAIN_FORKNUM);
} }
/* /*

View File

@@ -17,6 +17,10 @@ InitCenters(Relation index, VectorArray samples, VectorArray centers, float *low
FmgrInfo *procinfo; FmgrInfo *procinfo;
Oid collation; Oid collation;
int64 j; int64 j;
double distance;
double sum;
double choice;
Vector *vec;
float *weight = palloc(samples->length * sizeof(float)); float *weight = palloc(samples->length * sizeof(float));
int numCenters = centers->maxlen; int numCenters = centers->maxlen;
int numSamples = samples->length; int numSamples = samples->length;
@@ -29,21 +33,17 @@ InitCenters(Relation index, VectorArray samples, VectorArray centers, float *low
centers->length++; centers->length++;
for (j = 0; j < numSamples; j++) for (j = 0; j < numSamples; j++)
weight[j] = FLT_MAX; weight[j] = DBL_MAX;
for (int i = 0; i < numCenters; i++) for (int i = 0; i < numCenters; i++)
{ {
double sum;
double choice;
CHECK_FOR_INTERRUPTS(); CHECK_FOR_INTERRUPTS();
sum = 0.0; sum = 0.0;
for (j = 0; j < numSamples; j++) for (j = 0; j < numSamples; j++)
{ {
Vector *vec = VectorArrayGet(samples, j); vec = VectorArrayGet(samples, j);
double distance;
/* Only need to compute distance for new center */ /* Only need to compute distance for new center */
/* TODO Use triangle inequality to reduce distance calculations */ /* TODO Use triangle inequality to reduce distance calculations */
@@ -112,6 +112,7 @@ CompareVectors(const void *a, const void *b)
static void static void
QuickCenters(Relation index, VectorArray samples, VectorArray centers) QuickCenters(Relation index, VectorArray samples, VectorArray centers)
{ {
Vector *vec;
int dimensions = centers->dim; int dimensions = centers->dim;
Oid collation = index->rd_indcollation[0]; Oid collation = index->rd_indcollation[0];
FmgrInfo *normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_KMEANS_NORM_PROC); FmgrInfo *normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_KMEANS_NORM_PROC);
@@ -122,7 +123,7 @@ QuickCenters(Relation index, VectorArray samples, VectorArray centers)
qsort(samples->items, samples->length, VECTOR_SIZE(samples->dim), CompareVectors); qsort(samples->items, samples->length, VECTOR_SIZE(samples->dim), CompareVectors);
for (int i = 0; i < samples->length; i++) for (int i = 0; i < samples->length; i++)
{ {
Vector *vec = VectorArrayGet(samples, i); vec = VectorArrayGet(samples, i);
if (i == 0 || CompareVectors(vec, VectorArrayGet(samples, i - 1)) != 0) if (i == 0 || CompareVectors(vec, VectorArrayGet(samples, i - 1)) != 0)
{ {
@@ -135,7 +136,7 @@ QuickCenters(Relation index, VectorArray samples, VectorArray centers)
/* Fill remaining with random data */ /* Fill remaining with random data */
while (centers->length < centers->maxlen) while (centers->length < centers->maxlen)
{ {
Vector *vec = VectorArrayGet(centers, centers->length); vec = VectorArrayGet(centers, centers->length);
SET_VARSIZE(vec, VECTOR_SIZE(dimensions)); SET_VARSIZE(vec, VECTOR_SIZE(dimensions));
vec->dim = dimensions; vec->dim = dimensions;
@@ -167,6 +168,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
Oid collation; Oid collation;
Vector *vec; Vector *vec;
Vector *newCenter; Vector *newCenter;
int iteration;
int64 j; int64 j;
int64 k; int64 k;
int dimensions = centers->dim; int dimensions = centers->dim;
@@ -180,6 +182,14 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
float *s; float *s;
float *halfcdist; float *halfcdist;
float *newcdist; float *newcdist;
int changes;
double minDistance;
int closestCenter;
double distance;
bool rj;
bool rjreset;
double dxcx;
double dxc;
/* Calculate allocation sizes */ /* Calculate allocation sizes */
Size samplesSize = VECTOR_ARRAY_SIZE(samples->maxlen, samples->dim); Size samplesSize = VECTOR_ARRAY_SIZE(samples->maxlen, samples->dim);
@@ -237,14 +247,14 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
/* Assign each x to its closest initial center c(x) = argmin d(x,c) */ /* Assign each x to its closest initial center c(x) = argmin d(x,c) */
for (j = 0; j < numSamples; j++) for (j = 0; j < numSamples; j++)
{ {
float minDistance = FLT_MAX; minDistance = DBL_MAX;
int closestCenter = 0; closestCenter = 0;
/* Find closest center */ /* Find closest center */
for (k = 0; k < numCenters; k++) for (k = 0; k < numCenters; k++)
{ {
/* TODO Use Lemma 1 in k-means++ initialization */ /* TODO Use Lemma 1 in k-means++ initialization */
float distance = lowerBound[j * numCenters + k]; distance = lowerBound[j * numCenters + k];
if (distance < minDistance) if (distance < minDistance)
{ {
@@ -258,14 +268,13 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
} }
/* Give 500 iterations to converge */ /* Give 500 iterations to converge */
for (int iteration = 0; iteration < 500; iteration++) for (iteration = 0; iteration < 500; iteration++)
{ {
int changes = 0;
bool rjreset;
/* Can take a while, so ensure we can interrupt */ /* Can take a while, so ensure we can interrupt */
CHECK_FOR_INTERRUPTS(); CHECK_FOR_INTERRUPTS();
changes = 0;
/* Step 1: For all centers, compute distance */ /* Step 1: For all centers, compute distance */
for (j = 0; j < numCenters; j++) for (j = 0; j < numCenters; j++)
{ {
@@ -273,8 +282,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
for (k = j + 1; k < numCenters; k++) for (k = j + 1; k < numCenters; k++)
{ {
float distance = 0.5 * DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k)))); distance = 0.5 * DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k))));
halfcdist[j * numCenters + k] = distance; halfcdist[j * numCenters + k] = distance;
halfcdist[k * numCenters + j] = distance; halfcdist[k * numCenters + j] = distance;
} }
@@ -283,12 +291,10 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
/* For all centers c, compute s(c) */ /* For all centers c, compute s(c) */
for (j = 0; j < numCenters; j++) for (j = 0; j < numCenters; j++)
{ {
float minDistance = FLT_MAX; minDistance = DBL_MAX;
for (k = 0; k < numCenters; k++) for (k = 0; k < numCenters; k++)
{ {
float distance;
if (j == k) if (j == k)
continue; continue;
@@ -304,8 +310,6 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
for (j = 0; j < numSamples; j++) for (j = 0; j < numSamples; j++)
{ {
bool rj;
/* Step 2: Identify all points x such that u(x) <= s(c(x)) */ /* Step 2: Identify all points x such that u(x) <= s(c(x)) */
if (upperBound[j] <= s[closestCenters[j]]) if (upperBound[j] <= s[closestCenters[j]])
continue; continue;
@@ -314,8 +318,6 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
for (k = 0; k < numCenters; k++) for (k = 0; k < numCenters; k++)
{ {
float dxcx;
/* Step 3: For all remaining points x and centers c */ /* Step 3: For all remaining points x and centers c */
if (k == closestCenters[j]) if (k == closestCenters[j])
continue; continue;
@@ -345,7 +347,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
/* Step 3b */ /* Step 3b */
if (dxcx > lowerBound[j * numCenters + k] || dxcx > halfcdist[closestCenters[j] * numCenters + k]) if (dxcx > lowerBound[j * numCenters + k] || dxcx > halfcdist[closestCenters[j] * numCenters + k])
{ {
float dxc = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k)))); dxc = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k))));
/* d(x,c) calculated */ /* d(x,c) calculated */
lowerBound[j * numCenters + k] = dxc; lowerBound[j * numCenters + k] = dxc;
@@ -359,6 +361,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
changes++; changes++;
} }
} }
} }
} }
@@ -375,8 +378,6 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
for (j = 0; j < numSamples; j++) for (j = 0; j < numSamples; j++)
{ {
int closestCenter;
vec = VectorArrayGet(samples, j); vec = VectorArrayGet(samples, j);
closestCenter = closestCenters[j]; closestCenter = closestCenters[j];
@@ -425,7 +426,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
{ {
for (k = 0; k < numCenters; k++) for (k = 0; k < numCenters; k++)
{ {
float distance = lowerBound[j * numCenters + k] - newcdist[k]; distance = lowerBound[j * numCenters + k] - newcdist[k];
if (distance < 0) if (distance < 0)
distance = 0; distance = 0;
@@ -441,7 +442,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
/* Step 7 */ /* Step 7 */
for (j = 0; j < numCenters; j++) for (j = 0; j < numCenters; j++)
VectorArraySet(centers, j, VectorArrayGet(newCenters, j)); memcpy(VectorArrayGet(centers, j), VectorArrayGet(newCenters, j), VECTOR_SIZE(dimensions));
if (changes == 0 && iteration != 0) if (changes == 0 && iteration != 0)
break; break;
@@ -464,6 +465,9 @@ static void
CheckCenters(Relation index, VectorArray centers) CheckCenters(Relation index, VectorArray centers)
{ {
FmgrInfo *normprocinfo; FmgrInfo *normprocinfo;
Oid collation;
Vector *vec;
double norm;
if (centers->length != centers->maxlen) if (centers->length != centers->maxlen)
elog(ERROR, "Not enough centers. Please report a bug."); elog(ERROR, "Not enough centers. Please report a bug.");
@@ -471,7 +475,7 @@ CheckCenters(Relation index, VectorArray centers)
/* Ensure no NaN or infinite values */ /* Ensure no NaN or infinite values */
for (int i = 0; i < centers->length; i++) for (int i = 0; i < centers->length; i++)
{ {
Vector *vec = VectorArrayGet(centers, i); vec = VectorArrayGet(centers, i);
for (int j = 0; j < vec->dim; j++) for (int j = 0; j < vec->dim; j++)
{ {
@@ -497,12 +501,11 @@ CheckCenters(Relation index, VectorArray centers)
normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_NORM_PROC); normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_NORM_PROC);
if (normprocinfo != NULL) if (normprocinfo != NULL)
{ {
Oid collation = index->rd_indcollation[0]; collation = index->rd_indcollation[0];
for (int i = 0; i < centers->length; i++) for (int i = 0; i < centers->length; i++)
{ {
double norm = DatumGetFloat8(FunctionCall1Coll(normprocinfo, collation, PointerGetDatum(VectorArrayGet(centers, i)))); norm = DatumGetFloat8(FunctionCall1Coll(normprocinfo, collation, PointerGetDatum(VectorArrayGet(centers, i))));
if (norm == 0) if (norm == 0)
elog(ERROR, "Zero norm detected. Please report a bug."); elog(ERROR, "Zero norm detected. Please report a bug.");
} }

View File

@@ -57,12 +57,12 @@ IvfflatGetLists(Relation index)
* Get proc * Get proc
*/ */
FmgrInfo * FmgrInfo *
IvfflatOptionalProcInfo(Relation index, uint16 procnum) IvfflatOptionalProcInfo(Relation rel, uint16 procnum)
{ {
if (!OidIsValid(index_getprocid(index, 1, procnum))) if (!OidIsValid(index_getprocid(rel, 1, procnum)))
return NULL; return NULL;
return index_getprocinfo(index, 1, procnum); return index_getprocinfo(rel, 1, procnum);
} }
/* /*
@@ -136,6 +136,7 @@ IvfflatInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogStat
void void
IvfflatCommitBuffer(Buffer buf, GenericXLogState *state) IvfflatCommitBuffer(Buffer buf, GenericXLogState *state)
{ {
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
UnlockReleaseBuffer(buf); UnlockReleaseBuffer(buf);
} }
@@ -159,6 +160,8 @@ IvfflatAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **st
IvfflatInitPage(newbuf, newpage); IvfflatInitPage(newbuf, newpage);
/* Commit */ /* Commit */
MarkBufferDirty(*buf);
MarkBufferDirty(newbuf);
GenericXLogFinish(*state); GenericXLogFinish(*state);
/* Unlock */ /* Unlock */

View File

@@ -107,6 +107,7 @@ ivfflatbulkdelete(IndexVacuumInfo *info, IndexBulkDeleteResult *stats,
{ {
/* Delete tuples */ /* Delete tuples */
PageIndexMultiDelete(page, deletable, ndeletable); PageIndexMultiDelete(page, deletable, ndeletable);
MarkBufferDirty(buf);
GenericXLogFinish(state); GenericXLogFinish(state);
} }
else else

View File

@@ -1,294 +0,0 @@
#include "postgres.h"
#include <math.h>
#include <stdint.h>
#include "fmgr.h"
#include "lib/stringinfo.h"
#include "libpq/pqformat.h"
#include "tinyint.h"
#include "utils/array.h"
#include "utils/builtins.h"
#include "utils/numeric.h"
/*
* Check if array is a vector
*/
static bool
ArrayIsVector(ArrayType *a)
{
return ARR_NDIM(a) == 1 && !array_contains_nulls(a);
}
/*
* Check if dimensions are the same
*/
static int
CheckDims(ArrayType *a, ArrayType *b)
{
int dima;
int dimb;
if (!ArrayIsVector(a) || !ArrayIsVector(b))
return 0;
dima = ARR_DIMS(a)[0];
dimb = ARR_DIMS(b)[0];
if (dima != dimb)
return 0;
return dima;
}
/*
* Check range
*/
static void
CheckRange(long i)
{
if (i < INT8_MIN || i > INT8_MAX)
ereport(ERROR,
(errcode(ERRCODE_NUMERIC_VALUE_OUT_OF_RANGE),
errmsg("value \"%ld\" is out of range for type tinyint", i)));
}
/*
* Convert textual representation to internal representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_in);
Datum
tinyint_in(PG_FUNCTION_ARGS)
{
char *s = PG_GETARG_CSTRING(0);
const char *ptr = s;
long i;
char *end;
/* skip leading spaces */
while (*ptr != '\0' && isspace((unsigned char) *ptr))
ptr++;
if (*ptr == '\0')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type tinyint: \"%s\"", s)));
i = strtol(ptr, &end, 10);
ptr = end;
if (i < INT8_MIN || i > INT8_MAX)
ereport(ERROR,
(errcode(ERRCODE_NUMERIC_VALUE_OUT_OF_RANGE),
errmsg("value \"%s\" is out of range for type tinyint", s)));
/* allow trailing whitespace, but not other trailing chars */
while (*ptr != '\0' && isspace((unsigned char) *ptr))
ptr++;
if (*ptr != '\0')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type tinyint: \"%s\"", s)));
PG_RETURN_INT8(i);
}
/*
* Convert internal representation to textual representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_out);
Datum
tinyint_out(PG_FUNCTION_ARGS)
{
int8 num = PG_GETARG_INT8(0);
char *result = (char *) palloc(5); /* sign, 3 digits, '\0' */
pg_ltoa((int32) num, result);
PG_RETURN_CSTRING(result);
}
/*
* Convert external binary representation to internal representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_recv);
Datum
tinyint_recv(PG_FUNCTION_ARGS)
{
StringInfo buf = (StringInfo) PG_GETARG_POINTER(0);
PG_RETURN_INT8((int8) pq_getmsgint(buf, sizeof(int8)));
}
/*
* Convert internal representation to the external binary representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_send);
Datum
tinyint_send(PG_FUNCTION_ARGS)
{
int8 arg1 = PG_GETARG_INT8(0);
StringInfoData buf;
pq_begintypsend(&buf);
pq_sendint8(&buf, arg1);
PG_RETURN_BYTEA_P(pq_endtypsend(&buf));
}
/*
* Convert integer to tinyint
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(integer_to_tinyint);
Datum
integer_to_tinyint(PG_FUNCTION_ARGS)
{
int32 i = PG_GETARG_INT32(0);
CheckRange(i);
PG_RETURN_INT8(i);
}
/*
* Convert numeric to tinyint
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(numeric_to_tinyint);
Datum
numeric_to_tinyint(PG_FUNCTION_ARGS)
{
Numeric num = PG_GETARG_NUMERIC(0);
int32 i = numeric_int4_opt_error(num, NULL);
CheckRange(i);
PG_RETURN_INT8(i);
}
/*
* Get the L2 distance between tinyint arrays
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_l2_distance);
Datum
tinyint_l2_distance(PG_FUNCTION_ARGS)
{
ArrayType *a = PG_GETARG_ARRAYTYPE_P(0);
ArrayType *b = PG_GETARG_ARRAYTYPE_P(1);
int8 *ax = (int8 *) ARR_DATA_PTR(a);
int8 *bx = (int8 *) ARR_DATA_PTR(b);
double distance = 0.0;
int dim = CheckDims(a, b);
/* TODO Decide on error or NULL */
if (!dim)
PG_RETURN_NULL();
/* Auto-vectorized */
for (int i = 0; i < dim; i++)
{
double diff = ax[i] - bx[i];
distance += diff * diff;
}
PG_RETURN_FLOAT8(sqrt(distance));
}
/*
* Get the inner product of two tinyint arrays
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_inner_product);
Datum
tinyint_inner_product(PG_FUNCTION_ARGS)
{
ArrayType *a = PG_GETARG_ARRAYTYPE_P(0);
ArrayType *b = PG_GETARG_ARRAYTYPE_P(1);
int8 *ax = (int8 *) ARR_DATA_PTR(a);
int8 *bx = (int8 *) ARR_DATA_PTR(b);
double distance = 0.0;
int dim = CheckDims(a, b);
/* TODO Decide on error or NULL */
if (!dim)
PG_RETURN_NULL();
/* Auto-vectorized */
for (int i = 0; i < dim; i++)
distance += ax[i] * bx[i];
PG_RETURN_FLOAT8(distance);
}
/*
* Get the negative inner product of two tinyint arrays
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_negative_inner_product);
Datum
tinyint_negative_inner_product(PG_FUNCTION_ARGS)
{
ArrayType *a = PG_GETARG_ARRAYTYPE_P(0);
ArrayType *b = PG_GETARG_ARRAYTYPE_P(1);
int8 *ax = (int8 *) ARR_DATA_PTR(a);
int8 *bx = (int8 *) ARR_DATA_PTR(b);
double distance = 0.0;
int dim = CheckDims(a, b);
/* TODO Decide on error or NULL */
if (!dim)
PG_RETURN_NULL();
/* Auto-vectorized */
for (int i = 0; i < dim; i++)
distance += ax[i] * bx[i];
PG_RETURN_FLOAT8(distance * -1);
}
/*
* Get the cosine distance between two float2 arrays
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_cosine_distance);
Datum
tinyint_cosine_distance(PG_FUNCTION_ARGS)
{
ArrayType *a = PG_GETARG_ARRAYTYPE_P(0);
ArrayType *b = PG_GETARG_ARRAYTYPE_P(1);
int8 *ax = (int8 *) ARR_DATA_PTR(a);
int8 *bx = (int8 *) ARR_DATA_PTR(b);
double distance = 0.0;
double norma = 0.0;
double normb = 0.0;
double similarity;
int dim = CheckDims(a, b);
/* TODO Decide on error or NULL */
if (!dim)
PG_RETURN_NULL();
/* Auto-vectorized */
for (int i = 0; i < dim; i++)
{
float axi = ax[i];
float bxi = bx[i];
distance += axi * bxi;
norma += axi * axi;
normb += bxi * bxi;
}
/* Use sqrt(a * b) over sqrt(a) * sqrt(b) */
similarity = distance / sqrt(norma * normb);
#ifdef _MSC_VER
/* /fp:fast may not propagate NaN */
if (isnan(similarity))
PG_RETURN_FLOAT8(NAN);
#endif
/* Keep in range */
if (similarity > 1)
similarity = 1;
else if (similarity < -1)
similarity = -1;
PG_RETURN_FLOAT8(1 - similarity);
}

View File

@@ -1,8 +0,0 @@
#ifndef TINYINT_H
#define TINYINT_H
#define DatumGetInt8(X) ((int8) (X))
#define PG_GETARG_INT8(n) DatumGetInt8(PG_GETARG_DATUM(n))
#define PG_RETURN_INT8(x) return Int8GetDatum(x)
#endif

View File

@@ -54,85 +54,85 @@ SELECT vector_norm('[3e37,4e37]')::real;
5e+37 5e+37
(1 row) (1 row)
SELECT l2_distance('[0,0]'::vector, '[3,4]'); SELECT l2_distance('[0,0]', '[3,4]');
l2_distance l2_distance
------------- -------------
5 5
(1 row) (1 row)
SELECT l2_distance('[0,0]'::vector, '[0,1]'); SELECT l2_distance('[0,0]', '[0,1]');
l2_distance l2_distance
------------- -------------
1 1
(1 row) (1 row)
SELECT l2_distance('[1,2]'::vector, '[3]'); SELECT l2_distance('[1,2]', '[3]');
ERROR: different vector dimensions 2 and 1 ERROR: different vector dimensions 2 and 1
SELECT l2_distance('[3e38]'::vector, '[-3e38]'); SELECT l2_distance('[3e38]', '[-3e38]');
l2_distance l2_distance
------------- -------------
Infinity Infinity
(1 row) (1 row)
SELECT inner_product('[1,2]'::vector, '[3,4]'); SELECT inner_product('[1,2]', '[3,4]');
inner_product inner_product
--------------- ---------------
11 11
(1 row) (1 row)
SELECT inner_product('[1,2]'::vector, '[3]'); SELECT inner_product('[1,2]', '[3]');
ERROR: different vector dimensions 2 and 1 ERROR: different vector dimensions 2 and 1
SELECT inner_product('[3e38]'::vector, '[3e38]'); SELECT inner_product('[3e38]', '[3e38]');
inner_product inner_product
--------------- ---------------
Infinity Infinity
(1 row) (1 row)
SELECT cosine_distance('[1,2]'::vector, '[2,4]'); SELECT cosine_distance('[1,2]', '[2,4]');
cosine_distance cosine_distance
----------------- -----------------
0 0
(1 row) (1 row)
SELECT cosine_distance('[1,2]'::vector, '[0,0]'); SELECT cosine_distance('[1,2]', '[0,0]');
cosine_distance cosine_distance
----------------- -----------------
NaN NaN
(1 row) (1 row)
SELECT cosine_distance('[1,1]'::vector, '[1,1]'); SELECT cosine_distance('[1,1]', '[1,1]');
cosine_distance cosine_distance
----------------- -----------------
0 0
(1 row) (1 row)
SELECT cosine_distance('[1,0]'::vector, '[0,2]'); SELECT cosine_distance('[1,0]', '[0,2]');
cosine_distance cosine_distance
----------------- -----------------
1 1
(1 row) (1 row)
SELECT cosine_distance('[1,1]'::vector, '[-1,-1]'); SELECT cosine_distance('[1,1]', '[-1,-1]');
cosine_distance cosine_distance
----------------- -----------------
2 2
(1 row) (1 row)
SELECT cosine_distance('[1,2]'::vector, '[3]'); SELECT cosine_distance('[1,2]', '[3]');
ERROR: different vector dimensions 2 and 1 ERROR: different vector dimensions 2 and 1
SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]'); SELECT cosine_distance('[1,1]', '[1.1,1.1]');
cosine_distance cosine_distance
----------------- -----------------
0 0
(1 row) (1 row)
SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]'); SELECT cosine_distance('[1,1]', '[-1.1,-1.1]');
cosine_distance cosine_distance
----------------- -----------------
2 2
(1 row) (1 row)
SELECT cosine_distance('[3e38]'::vector, '[3e38]'); SELECT cosine_distance('[3e38]', '[3e38]');
cosine_distance cosine_distance
----------------- -----------------
NaN NaN

View File

@@ -1,148 +0,0 @@
SELECT '127'::tinyint;
tinyint
---------
127
(1 row)
SELECT '128'::tinyint;
ERROR: value "128" is out of range for type tinyint
LINE 1: SELECT '128'::tinyint;
^
SELECT '-128'::tinyint;
tinyint
---------
-128
(1 row)
SELECT '-129'::tinyint;
ERROR: value "-129" is out of range for type tinyint
LINE 1: SELECT '-129'::tinyint;
^
SELECT ''::tinyint;
ERROR: invalid input syntax for type tinyint: ""
LINE 1: SELECT ''::tinyint;
^
SELECT ' 1'::tinyint;
tinyint
---------
1
(1 row)
SELECT '1 '::tinyint;
tinyint
---------
1
(1 row)
SELECT '1a'::tinyint;
ERROR: invalid input syntax for type tinyint: "1a"
LINE 1: SELECT '1a'::tinyint;
^
SELECT '{1,2,3}'::tinyint[];
tinyint
---------
{1,2,3}
(1 row)
SELECT '128'::numeric::tinyint;
ERROR: value "128" is out of range for type tinyint
SELECT 'NaN'::numeric::tinyint;
ERROR: cannot convert NaN to integer
SELECT l2_distance('{0,0}'::tinyint[], '{3,4}'::tinyint[]);
l2_distance
-------------
5
(1 row)
SELECT l2_distance('{0,0}'::tinyint[], '{0,1}'::tinyint[]);
l2_distance
-------------
1
(1 row)
SELECT l2_distance('{1,2}'::tinyint[], '{3}'::tinyint[]);
l2_distance
-------------
(1 row)
SELECT l2_distance('{3e38}'::tinyint[], '{-3e38}'::tinyint[]);
ERROR: invalid input syntax for type tinyint: "3e38"
LINE 1: SELECT l2_distance('{3e38}'::tinyint[], '{-3e38}'::tinyint[]...
^
SELECT '{0,0}'::tinyint[] <-> '{3,4}'::tinyint[];
?column?
----------
5
(1 row)
SELECT inner_product('{1,2}'::tinyint[], '{3,4}'::tinyint[]);
inner_product
---------------
11
(1 row)
SELECT inner_product('{1,2}'::tinyint[], '{3}'::tinyint[]);
inner_product
---------------
(1 row)
SELECT inner_product('{127}'::tinyint[], '{127}'::tinyint[]);
inner_product
---------------
16129
(1 row)
SELECT '{1,2}'::tinyint[] <#> '{3,4}'::tinyint[];
?column?
----------
-11
(1 row)
SELECT cosine_distance('{1,2}'::tinyint[], '{2,4}'::tinyint[]);
cosine_distance
-----------------
0
(1 row)
SELECT cosine_distance('{1,2}'::tinyint[], '{0,0}'::tinyint[]);
cosine_distance
-----------------
NaN
(1 row)
SELECT cosine_distance('{1,1}'::tinyint[], '{1,1}'::tinyint[]);
cosine_distance
-----------------
0
(1 row)
SELECT cosine_distance('{1,0}'::tinyint[], '{0,2}'::tinyint[]);
cosine_distance
-----------------
1
(1 row)
SELECT cosine_distance('{1,1}'::tinyint[], '{-1,-1}'::tinyint[]);
cosine_distance
-----------------
2
(1 row)
SELECT cosine_distance('{1,2}'::tinyint[], '{3}'::tinyint[]);
cosine_distance
-----------------
(1 row)
SELECT cosine_distance('{3e38}'::tinyint[], '{3e38}'::tinyint[]);
ERROR: invalid input syntax for type tinyint: "3e38"
LINE 1: SELECT cosine_distance('{3e38}'::tinyint[], '{3e38}'::tinyin...
^
SELECT '{1,2}'::tinyint[] <=> '{2,4}'::tinyint[];
?column?
----------
0
(1 row)

View File

@@ -13,24 +13,24 @@ SELECT vector_norm('[3,4]');
SELECT vector_norm('[0,1]'); SELECT vector_norm('[0,1]');
SELECT vector_norm('[3e37,4e37]')::real; SELECT vector_norm('[3e37,4e37]')::real;
SELECT l2_distance('[0,0]'::vector, '[3,4]'); SELECT l2_distance('[0,0]', '[3,4]');
SELECT l2_distance('[0,0]'::vector, '[0,1]'); SELECT l2_distance('[0,0]', '[0,1]');
SELECT l2_distance('[1,2]'::vector, '[3]'); SELECT l2_distance('[1,2]', '[3]');
SELECT l2_distance('[3e38]'::vector, '[-3e38]'); SELECT l2_distance('[3e38]', '[-3e38]');
SELECT inner_product('[1,2]'::vector, '[3,4]'); SELECT inner_product('[1,2]', '[3,4]');
SELECT inner_product('[1,2]'::vector, '[3]'); SELECT inner_product('[1,2]', '[3]');
SELECT inner_product('[3e38]'::vector, '[3e38]'); SELECT inner_product('[3e38]', '[3e38]');
SELECT cosine_distance('[1,2]'::vector, '[2,4]'); SELECT cosine_distance('[1,2]', '[2,4]');
SELECT cosine_distance('[1,2]'::vector, '[0,0]'); SELECT cosine_distance('[1,2]', '[0,0]');
SELECT cosine_distance('[1,1]'::vector, '[1,1]'); SELECT cosine_distance('[1,1]', '[1,1]');
SELECT cosine_distance('[1,0]'::vector, '[0,2]'); SELECT cosine_distance('[1,0]', '[0,2]');
SELECT cosine_distance('[1,1]'::vector, '[-1,-1]'); SELECT cosine_distance('[1,1]', '[-1,-1]');
SELECT cosine_distance('[1,2]'::vector, '[3]'); SELECT cosine_distance('[1,2]', '[3]');
SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]'); SELECT cosine_distance('[1,1]', '[1.1,1.1]');
SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]'); SELECT cosine_distance('[1,1]', '[-1.1,-1.1]');
SELECT cosine_distance('[3e38]'::vector, '[3e38]'); SELECT cosine_distance('[3e38]', '[3e38]');
SELECT l1_distance('[0,0]', '[3,4]'); SELECT l1_distance('[0,0]', '[3,4]');
SELECT l1_distance('[0,0]', '[0,1]'); SELECT l1_distance('[0,0]', '[0,1]');

View File

@@ -1,34 +0,0 @@
SELECT '127'::tinyint;
SELECT '128'::tinyint;
SELECT '-128'::tinyint;
SELECT '-129'::tinyint;
SELECT ''::tinyint;
SELECT ' 1'::tinyint;
SELECT '1 '::tinyint;
SELECT '1a'::tinyint;
SELECT '{1,2,3}'::tinyint[];
SELECT '128'::numeric::tinyint;
SELECT 'NaN'::numeric::tinyint;
SELECT l2_distance('{0,0}'::tinyint[], '{3,4}'::tinyint[]);
SELECT l2_distance('{0,0}'::tinyint[], '{0,1}'::tinyint[]);
SELECT l2_distance('{1,2}'::tinyint[], '{3}'::tinyint[]);
SELECT l2_distance('{3e38}'::tinyint[], '{-3e38}'::tinyint[]);
SELECT '{0,0}'::tinyint[] <-> '{3,4}'::tinyint[];
SELECT inner_product('{1,2}'::tinyint[], '{3,4}'::tinyint[]);
SELECT inner_product('{1,2}'::tinyint[], '{3}'::tinyint[]);
SELECT inner_product('{127}'::tinyint[], '{127}'::tinyint[]);
SELECT '{1,2}'::tinyint[] <#> '{3,4}'::tinyint[];
SELECT cosine_distance('{1,2}'::tinyint[], '{2,4}'::tinyint[]);
SELECT cosine_distance('{1,2}'::tinyint[], '{0,0}'::tinyint[]);
SELECT cosine_distance('{1,1}'::tinyint[], '{1,1}'::tinyint[]);
SELECT cosine_distance('{1,0}'::tinyint[], '{0,2}'::tinyint[]);
SELECT cosine_distance('{1,1}'::tinyint[], '{-1,-1}'::tinyint[]);
SELECT cosine_distance('{1,2}'::tinyint[], '{3}'::tinyint[]);
SELECT cosine_distance('{3e38}'::tinyint[], '{3e38}'::tinyint[]);
SELECT '{1,2}'::tinyint[] <=> '{2,4}'::tinyint[];