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15 Commits

Author SHA1 Message Date
Andrew Kane
3ed582fe92 Removed loaded 2023-10-23 00:42:01 -07:00
Andrew Kane
d74139c447 Use datums for HNSW [skip ci] 2023-10-16 16:11:21 -07:00
Andrew Kane
e630efd195 Version bump to 0.5.1 [skip ci] 2023-10-10 17:40:57 -07:00
Andrew Kane
b5b912906b Added check for MVCC-compliant snapshot and removed marking tuples as dead for IVFFlat index scans - closes #260 2023-10-10 17:28:48 -07:00
Andrew Kane
4b5db94307 Disable closer caching for new elements for now 2023-10-06 14:27:09 -07:00
Andrew Kane
65e70326b8 Updated comment [skip ci] 2023-10-06 14:07:35 -07:00
Andrew Kane
71641ed84e Updated comment [skip ci] 2023-10-06 13:58:07 -07:00
Andrew Kane
f3dba25036 Added comment [skip ci] 2023-10-06 13:56:25 -07:00
Andrew Kane
5588ba6410 Improved variable name [skip ci] 2023-10-06 13:46:19 -07:00
Andrew Kane
ec9fac5456 Improved closerSet logic 2023-10-06 13:39:55 -07:00
Andrew Kane
8085d3e538 Moved sorting logic into SelectNeighbors 2023-10-06 12:56:15 -07:00
Andrew Kane
cae162ffc6 Ensure order is deterministic for SelectNeighbors closer caching 2023-10-06 12:26:53 -07:00
Andrew Kane
62482e3760 Use e for consistency 2023-10-05 16:15:13 -07:00
Heikki Linnakangas
c81302b835 Improve HNSW index build performance more (#295)
This takes the approach from commit a713e2acaa further. Once we have
remove a candidate from the "closer" set, we still don't need to
recalculate everything that follows. Any candidates that were in the
closer set before still only need to be compared with any new
candidates that we have added.
2023-10-05 16:04:50 -07:00
Andrew Kane
a713e2acaa Improved performance of HNSW index builds - closes #292
Co-authored-by: Heikki Linnakangas <heikki.linnakangas@iki.fi>
2023-10-05 13:21:26 -07:00
23 changed files with 330 additions and 816 deletions

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@@ -1,7 +1,7 @@
## 0.5.1 (unreleased)
## 0.5.1 (2023-10-10)
- Added check for MVCC-compliant snapshot for HNSW index scans
- Improved performance of index scans for IVFFlat after updates and deletes
- Improved performance of HNSW index builds
- Added check for MVCC-compliant snapshot for index scans
## 0.5.0 (2023-08-28)

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@@ -2,7 +2,7 @@
"name": "vector",
"abstract": "Open-source vector similarity search for Postgres",
"description": "Supports L2 distance, inner product, and cosine distance",
"version": "0.5.0",
"version": "0.5.1",
"maintainer": [
"Andrew Kane <andrew@ankane.org>"
],
@@ -20,7 +20,7 @@
"vector": {
"file": "sql/vector.sql",
"docfile": "README.md",
"version": "0.5.0",
"version": "0.5.1",
"abstract": "Open-source vector similarity search for Postgres"
}
},

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@@ -1,10 +1,10 @@
EXTENSION = vector
EXTVERSION = 0.5.0
EXTVERSION = 0.5.1
MODULE_big = vector
DATA = $(wildcard sql/*--*.sql)
OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/tinyint.o src/vector.o
HEADERS = src/tinyint.h src/vector.h
OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/vector.o
HEADERS = src/vector.h
TESTS = $(wildcard test/sql/*.sql)
REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS))

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@@ -1,8 +1,8 @@
EXTENSION = vector
EXTVERSION = 0.5.0
EXTVERSION = 0.5.1
OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\tinyint.obj src\vector.obj
HEADERS = src\tinyint.h src\vector.h
OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\vector.obj
HEADERS = src\vector.h
REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged
REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)
@@ -56,7 +56,7 @@ install:
copy $(EXTENSION).control "$(SHAREDIR)\extension"
copy sql\$(EXTENSION)--*.sql "$(SHAREDIR)\extension"
mkdir "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
for %f in ($(HEADERS)) do copy %f "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
copy $(HEADERS) "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
installcheck:
"$(BINDIR)\pg_regress" --bindir="$(BINDIR)" $(REGRESS_OPTS) $(REGRESS)

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@@ -18,7 +18,7 @@ Compile and install the extension (supports Postgres 11+)
```sh
cd /tmp
git clone --branch v0.5.0 https://github.com/pgvector/pgvector.git
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
cd pgvector
make
make install # may need sudo
@@ -509,7 +509,7 @@ Then use `nmake` to build:
```cmd
set "PGROOT=C:\Program Files\PostgreSQL\15"
git clone --branch v0.5.0 https://github.com/pgvector/pgvector.git
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
cd pgvector
nmake /F Makefile.win
nmake /F Makefile.win install
@@ -530,7 +530,7 @@ This adds pgvector to the [Postgres image](https://hub.docker.com/_/postgres) (r
You can also build the image manually:
```sh
git clone --branch v0.5.0 https://github.com/pgvector/pgvector.git
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
cd pgvector
docker build --build-arg PG_MAJOR=15 -t myuser/pgvector .
```

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@@ -1,67 +1,2 @@
-- complain if script is sourced in psql, rather than via CREATE EXTENSION
\echo Use "ALTER EXTENSION vector UPDATE TO '0.5.1'" to load this file. \quit
-- tinyint
CREATE TYPE tinyint;
CREATE FUNCTION tinyint_in(cstring, oid, integer) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_out(tinyint) RETURNS cstring
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_recv(internal, oid, integer) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_send(tinyint) RETURNS bytea
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE TYPE tinyint (
INPUT = tinyint_in,
OUTPUT = tinyint_out,
RECEIVE = tinyint_recv,
SEND = tinyint_send,
INTERNALLENGTH = 1,
PASSEDBYVALUE,
ALIGNMENT = char
);
CREATE FUNCTION integer_to_tinyint(integer, integer, boolean) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION numeric_to_tinyint(numeric, integer, boolean) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE CAST (integer AS tinyint)
WITH FUNCTION integer_to_tinyint(integer, integer, boolean) AS IMPLICIT;
CREATE CAST (numeric AS tinyint)
WITH FUNCTION numeric_to_tinyint(numeric, integer, boolean) AS IMPLICIT;
CREATE FUNCTION l2_distance(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION inner_product(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION cosine_distance(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_negative_inner_product(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE OPERATOR <-> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = l2_distance,
COMMUTATOR = '<->'
);
CREATE OPERATOR <#> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = tinyint_negative_inner_product,
COMMUTATOR = '<#>'
);
CREATE OPERATOR <=> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = cosine_distance,
COMMUTATOR = '<=>'
);

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@@ -290,68 +290,3 @@ CREATE OPERATOR CLASS vector_cosine_ops
OPERATOR 1 <=> (vector, vector) FOR ORDER BY float_ops,
FUNCTION 1 vector_negative_inner_product(vector, vector),
FUNCTION 2 vector_norm(vector);
-- tinyint
CREATE TYPE tinyint;
CREATE FUNCTION tinyint_in(cstring, oid, integer) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_out(tinyint) RETURNS cstring
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_recv(internal, oid, integer) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_send(tinyint) RETURNS bytea
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE TYPE tinyint (
INPUT = tinyint_in,
OUTPUT = tinyint_out,
RECEIVE = tinyint_recv,
SEND = tinyint_send,
INTERNALLENGTH = 1,
PASSEDBYVALUE,
ALIGNMENT = char
);
CREATE FUNCTION integer_to_tinyint(integer, integer, boolean) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION numeric_to_tinyint(numeric, integer, boolean) RETURNS tinyint
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE CAST (integer AS tinyint)
WITH FUNCTION integer_to_tinyint(integer, integer, boolean) AS IMPLICIT;
CREATE CAST (numeric AS tinyint)
WITH FUNCTION numeric_to_tinyint(numeric, integer, boolean) AS IMPLICIT;
CREATE FUNCTION l2_distance(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION inner_product(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION cosine_distance(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME', 'tinyint_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION tinyint_negative_inner_product(tinyint[], tinyint[]) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE OPERATOR <-> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = l2_distance,
COMMUTATOR = '<->'
);
CREATE OPERATOR <#> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = tinyint_negative_inner_product,
COMMUTATOR = '<#>'
);
CREATE OPERATOR <=> (
LEFTARG = tinyint[], RIGHTARG = tinyint[], PROCEDURE = cosine_distance,
COMMUTATOR = '<=>'
);

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@@ -33,6 +33,12 @@ HnswInit(void)
HNSW_DEFAULT_EF_CONSTRUCTION, HNSW_MIN_EF_CONSTRUCTION, HNSW_MAX_EF_CONSTRUCTION
#if PG_VERSION_NUM >= 130000
,AccessExclusiveLock
#endif
);
add_int_reloption(hnsw_relopt_kind, "dimensions", "Number of dimensions",
HNSW_DEFAULT_DIMENSIONS, HNSW_MIN_DIMENSIONS, HNSW_MAX_DIMENSIONS
#if PG_VERSION_NUM >= 130000
,AccessExclusiveLock
#endif
);
@@ -125,6 +131,7 @@ hnswoptions(Datum reloptions, bool validate)
static const relopt_parse_elt tab[] = {
{"m", RELOPT_TYPE_INT, offsetof(HnswOptions, m)},
{"ef_construction", RELOPT_TYPE_INT, offsetof(HnswOptions, efConstruction)},
{"dimensions", RELOPT_TYPE_INT, offsetof(HnswOptions, dimensions)},
};
#if PG_VERSION_NUM >= 130000

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@@ -42,6 +42,9 @@
#define HNSW_DEFAULT_EF_SEARCH 40
#define HNSW_MIN_EF_SEARCH 1
#define HNSW_MAX_EF_SEARCH 1000
#define HNSW_DEFAULT_DIMENSIONS -1
#define HNSW_MIN_DIMENSIONS 1
#define HNSW_MAX_DIMENSIONS HNSW_MAX_DIM
/* Tuple types */
#define HNSW_ELEMENT_TUPLE_TYPE 1
@@ -59,7 +62,7 @@
#define HNSW_MAX_SIZE (BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - sizeof(ItemIdData))
#define HNSW_ELEMENT_TUPLE_SIZE(_dim) MAXALIGN(offsetof(HnswElementTupleData, vec) + VECTOR_SIZE(_dim))
#define HNSW_ELEMENT_TUPLE_SIZE(_datum) MAXALIGN(offsetof(HnswElementTupleData, value) + VARSIZE_ANY(_datum))
#define HNSW_NEIGHBOR_TUPLE_SIZE(level, m) MAXALIGN(offsetof(HnswNeighborTupleData, indextids) + ((level) + 2) * (m) * sizeof(ItemPointerData))
#define HnswPageGetOpaque(page) ((HnswPageOpaque) PageGetSpecialPointer(page))
@@ -103,7 +106,7 @@ typedef struct HnswElementData
OffsetNumber offno;
OffsetNumber neighborOffno;
BlockNumber neighborPage;
Vector *vec;
Datum value;
} HnswElementData;
typedef HnswElementData * HnswElement;
@@ -112,11 +115,13 @@ typedef struct HnswCandidate
{
HnswElement element;
float distance;
bool closer;
} HnswCandidate;
typedef struct HnswNeighborArray
{
int length;
bool closerSet;
HnswCandidate *items;
} HnswNeighborArray;
@@ -132,6 +137,7 @@ typedef struct HnswOptions
int32 vl_len_; /* varlena header (do not touch directly!) */
int m; /* number of connections */
int efConstruction; /* size of dynamic candidate list */
int dimensions;
} HnswOptions;
typedef struct HnswBuildState
@@ -202,7 +208,7 @@ typedef struct HnswElementTupleData
ItemPointerData heaptids[HNSW_HEAPTIDS];
ItemPointerData neighbortid;
uint16 unused2;
Vector vec;
char value[FLEXIBLE_ARRAY_MEMBER];
} HnswElementTupleData;
typedef HnswElementTupleData * HnswElementTuple;
@@ -260,6 +266,7 @@ typedef struct HnswVacuumState
/* Methods */
int HnswGetM(Relation index);
int HnswGetEfConstruction(Relation index);
int HnswGetDimensions(Relation index);
FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum);
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
void HnswCommitBuffer(Buffer buf, GenericXLogState *state);

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@@ -8,6 +8,7 @@
#include "lib/pairingheap.h"
#include "nodes/pg_list.h"
#include "storage/bufmgr.h"
#include "utils/datum.h"
#include "utils/memutils.h"
#if PG_VERSION_NUM >= 140000
@@ -105,8 +106,6 @@ CreateElementPages(HnswBuildState * buildstate)
{
Relation index = buildstate->index;
ForkNumber forkNum = buildstate->forkNum;
int dimensions = buildstate->dimensions;
Size etupSize;
Size maxSize;
HnswElementTuple etup;
HnswNeighborTuple ntup;
@@ -118,10 +117,9 @@ CreateElementPages(HnswBuildState * buildstate)
/* Calculate sizes */
maxSize = HNSW_MAX_SIZE;
etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions);
/* Allocate once */
etup = palloc0(etupSize);
etup = palloc0(BLCKSZ);
ntup = palloc0(BLCKSZ);
/* Prepare first page */
@@ -133,12 +131,14 @@ CreateElementPages(HnswBuildState * buildstate)
foreach(lc, buildstate->elements)
{
HnswElement element = lfirst(lc);
Size etupSize;
Size ntupSize;
Size combinedSize;
HnswSetElementTuple(etup, element);
/* Calculate sizes */
etupSize = HNSW_ELEMENT_TUPLE_SIZE(element->value);
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, buildstate->m);
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
@@ -273,18 +273,15 @@ InsertTuple(Relation index, Datum *values, HnswElement element, HnswBuildState *
int m = buildstate->m;
/* Detoast once for all calls */
Datum value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
element->value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
/* Normalize if needed */
if (buildstate->normprocinfo != NULL)
{
if (!HnswNormValue(buildstate->normprocinfo, collation, &value, buildstate->normvec))
if (!HnswNormValue(buildstate->normprocinfo, collation, &element->value, buildstate->normvec))
return false;
}
/* Copy value to element so accessible outside of memory context */
memcpy(element->vec, DatumGetVector(value), VECTOR_SIZE(buildstate->dimensions));
/* Insert element in graph */
HnswInsertElement(element, entryPoint, NULL, procinfo, collation, m, efConstruction, false);
@@ -360,7 +357,6 @@ BuildCallback(Relation index, CALLBACK_ITEM_POINTER, Datum *values,
/* Allocate necessary memory outside of memory context */
element = HnswInitElement(tid, buildstate->m, buildstate->ml, buildstate->maxLevel);
element->vec = palloc(VECTOR_SIZE(buildstate->dimensions));
/* Use memory context since detoast can allocate */
oldCtx = MemoryContextSwitchTo(buildstate->tmpCtx);
@@ -368,9 +364,8 @@ BuildCallback(Relation index, CALLBACK_ITEM_POINTER, Datum *values,
/* Insert tuple */
inserted = InsertTuple(index, values, element, buildstate, &dup);
/* Reset memory context */
/* Switch memory context */
MemoryContextSwitchTo(oldCtx);
MemoryContextReset(buildstate->tmpCtx);
/* Add outside memory context */
if (dup != NULL)
@@ -378,9 +373,18 @@ BuildCallback(Relation index, CALLBACK_ITEM_POINTER, Datum *values,
/* Add to buildstate or free */
if (inserted)
{
element->value = datumCopy(element->value, false, -1);
buildstate->elements = lappend(buildstate->elements, element);
}
else
{
element->value = PointerGetDatum(NULL);
HnswFreeElement(element);
}
/* Reset memory context */
MemoryContextReset(buildstate->tmpCtx);
}
/*
@@ -395,6 +399,7 @@ HnswGetMaxInMemoryElements(int m, double ml, int dimensions)
elementSize += sizeof(HnswNeighborArray) * (avgLevel + 1);
elementSize += sizeof(HnswCandidate) * (m * (avgLevel + 2));
elementSize += sizeof(ItemPointerData);
/* TODO Handle non-vector types */
elementSize += VECTOR_SIZE(dimensions);
return (maintenance_work_mem * 1024L) / elementSize;
}
@@ -412,7 +417,10 @@ InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, Index
buildstate->m = HnswGetM(index);
buildstate->efConstruction = HnswGetEfConstruction(index);
buildstate->dimensions = TupleDescAttr(index->rd_att, 0)->atttypmod;
buildstate->dimensions = HnswGetDimensions(index);
if (buildstate->dimensions < 0)
buildstate->dimensions = TupleDescAttr(index->rd_att, 0)->atttypmod;
/* Require column to have dimensions to be indexed */
if (buildstate->dimensions < 0)

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@@ -123,7 +123,6 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
Size minCombinedSize;
HnswElementTuple etup;
BlockNumber currentPage = insertPage;
int dimensions = e->vec->dim;
HnswNeighborTuple ntup;
Buffer nbuf;
Page npage;
@@ -132,7 +131,7 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
BlockNumber newInsertPage = InvalidBlockNumber;
/* Calculate sizes */
etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions);
etupSize = HNSW_ELEMENT_TUPLE_SIZE(e->value);
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m);
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
maxSize = HNSW_MAX_SIZE;
@@ -405,7 +404,7 @@ HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
Buffer buf;
Page page;
GenericXLogState *state;
Size etupSize = HNSW_ELEMENT_TUPLE_SIZE(dup->vec->dim);
Size etupSize = HNSW_ELEMENT_TUPLE_SIZE(dup->value);
HnswElementTuple etup;
int i;
@@ -515,7 +514,7 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
/* Create an element */
element = HnswInitElement(heap_tid, m, HnswGetMl(m), HnswGetMaxLevel(m));
element->vec = DatumGetVector(value);
element->value = value;
/* Prevent concurrent inserts when likely updating entry point */
if (entryPoint == NULL || element->level > entryPoint->level)

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@@ -4,6 +4,7 @@
#include "hnsw.h"
#include "storage/bufmgr.h"
#include "utils/datum.h"
#include "vector.h"
/*
@@ -34,6 +35,20 @@ HnswGetEfConstruction(Relation index)
return HNSW_DEFAULT_EF_CONSTRUCTION;
}
/*
* Get the number of dimensions in the index
*/
int
HnswGetDimensions(Relation index)
{
HnswOptions *opts = (HnswOptions *) index->rd_options;
if (opts)
return opts->dimensions;
return HNSW_DEFAULT_DIMENSIONS;
}
/*
* Get proc
*/
@@ -139,6 +154,7 @@ HnswInitNeighbors(HnswElement element, int m)
a = &element->neighbors[lc];
a->length = 0;
a->items = palloc(sizeof(HnswCandidate) * lm);
a->closerSet = false;
}
}
@@ -186,7 +202,8 @@ HnswFreeElement(HnswElement element)
{
HnswFreeNeighbors(element);
list_free_deep(element->heaptids);
pfree(element->vec);
if (DatumGetPointer(element->value))
pfree(DatumGetPointer(element->value));
pfree(element);
}
@@ -213,7 +230,7 @@ HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno)
element->blkno = blkno;
element->offno = offno;
element->neighbors = NULL;
element->vec = NULL;
element->value = PointerGetDatum(NULL);
return element;
}
@@ -323,7 +340,7 @@ HnswSetElementTuple(HnswElementTuple etup, HnswElement element)
else
ItemPointerSetInvalid(&etup->heaptids[i]);
}
memcpy(&etup->vec, element->vec, VECTOR_SIZE(element->vec->dim));
memcpy(&etup->value, DatumGetPointer(element->value), VARSIZE_ANY(element->value));
}
/*
@@ -446,8 +463,9 @@ HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHe
if (loadVec)
{
element->vec = palloc(VECTOR_SIZE(etup->vec.dim));
memcpy(element->vec, &etup->vec, VECTOR_SIZE(etup->vec.dim));
Datum value = PointerGetDatum(&etup->value);
element->value = datumCopy(value, false, -1);
}
}
@@ -475,7 +493,7 @@ HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index,
/* Calculate distance */
if (distance != NULL)
*distance = (float) DatumGetFloat8(FunctionCall2Coll(procinfo, collation, *q, PointerGetDatum(&etup->vec)));
*distance = (float) DatumGetFloat8(FunctionCall2Coll(procinfo, collation, *q, PointerGetDatum(&etup->value)));
UnlockReleaseBuffer(buf);
}
@@ -486,7 +504,7 @@ HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index,
static float
GetCandidateDistance(HnswCandidate * hc, Datum q, FmgrInfo *procinfo, Oid collation)
{
return DatumGetFloat8(FunctionCall2Coll(procinfo, collation, q, PointerGetDatum(hc->element->vec)));
return DatumGetFloat8(FunctionCall2Coll(procinfo, collation, q, hc->element->value));
}
/*
@@ -692,6 +710,34 @@ HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *pro
return w;
}
/*
* Compare candidate distances
*/
static int
#if PG_VERSION_NUM >= 130000
CompareCandidateDistances(const ListCell *a, const ListCell *b)
#else
CompareCandidateDistances(const void *a, const void *b)
#endif
{
HnswCandidate *hca = lfirst((ListCell *) a);
HnswCandidate *hcb = lfirst((ListCell *) b);
if (hca->distance < hcb->distance)
return 1;
if (hca->distance > hcb->distance)
return -1;
if (hca->element < hcb->element)
return 1;
if (hca->element > hcb->element)
return -1;
return 0;
}
/*
* Calculate the distance between elements
*/
@@ -721,7 +767,7 @@ HnswGetDistance(HnswElement a, HnswElement b, int lc, FmgrInfo *procinfo, Oid co
}
}
return DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(a->vec), PointerGetDatum(b->vec)));
return DatumGetFloat8(FunctionCall2Coll(procinfo, collation, a->value, b->value));
}
/*
@@ -748,33 +794,77 @@ CheckElementCloser(HnswCandidate * e, List *r, int lc, FmgrInfo *procinfo, Oid c
* Algorithm 4 from paper
*/
static List *
SelectNeighbors(List *c, int m, int lc, FmgrInfo *procinfo, Oid collation, HnswCandidate * *pruned)
SelectNeighbors(List *c, int m, int lc, FmgrInfo *procinfo, Oid collation, HnswElement e2, HnswCandidate * newCandidate, HnswCandidate * *pruned, bool sortCandidates)
{
List *r = NIL;
List *w = list_copy(c);
pairingheap *wd;
bool mustCalculate = !e2->neighbors[lc].closerSet;
List *added = NIL;
bool removedAny = false;
if (list_length(w) <= m)
return w;
wd = pairingheap_allocate(CompareNearestCandidates, NULL);
/* Ensure order of candidates is deterministic for closer caching */
if (sortCandidates)
list_sort(w, CompareCandidateDistances);
while (list_length(w) > 0 && list_length(r) < m)
{
/* Assumes w is already ordered desc */
HnswCandidate *e = llast(w);
bool closer;
w = list_delete_last(w);
closer = CheckElementCloser(e, r, lc, procinfo, collation);
/* Use previous state of r and wd to skip work when possible */
if (mustCalculate)
e->closer = CheckElementCloser(e, r, lc, procinfo, collation);
else if (list_length(added) > 0)
{
/*
* If the current candidate was closer, we only need to compare it
* with the other candidates that we have added.
*/
if (e->closer)
{
e->closer = CheckElementCloser(e, added, lc, procinfo, collation);
if (closer)
if (!e->closer)
removedAny = true;
}
else
{
/*
* If we have removed any candidates from closer, a candidate
* that was not closer earlier might now be.
*/
if (removedAny)
{
e->closer = CheckElementCloser(e, r, lc, procinfo, collation);
if (e->closer)
added = lappend(added, e);
}
}
}
else if (e == newCandidate)
{
e->closer = CheckElementCloser(e, r, lc, procinfo, collation);
if (e->closer)
added = lappend(added, e);
}
if (e->closer)
r = lappend(r, e);
else
pairingheap_add(wd, &(CreatePairingHeapNode(e)->ph_node));
}
/* Cached value can only be used in future if sorted deterministically */
e2->neighbors[lc].closerSet = sortCandidates;
/* Keep pruned connections */
while (!pairingheap_is_empty(wd) && list_length(r) < m)
r = lappend(r, ((HnswPairingHeapNode *) pairingheap_remove_first(wd))->inner);
@@ -804,7 +894,7 @@ HnswFindDuplicate(HnswElement e)
HnswCandidate *neighbor = &neighbors->items[i];
/* Exit early since ordered by distance */
if (vector_cmp_internal(e->vec, neighbor->element->vec) != 0)
if (!datumIsEqual(e->value, neighbor->element->value, false, -1))
break;
/* Check for space */
@@ -828,28 +918,6 @@ AddConnections(HnswElement element, List *neighbors, int m, int lc)
a->items[a->length++] = *((HnswCandidate *) lfirst(lc2));
}
/*
* Compare candidate distances
*/
static int
#if PG_VERSION_NUM >= 130000
CompareCandidateDistances(const ListCell *a, const ListCell *b)
#else
CompareCandidateDistances(const void *a, const void *b)
#endif
{
HnswCandidate *hca = lfirst((ListCell *) a);
HnswCandidate *hcb = lfirst((ListCell *) b);
if (hca->distance < hcb->distance)
return 1;
if (hca->distance > hcb->distance)
return -1;
return 0;
}
/*
* Update connections
*/
@@ -879,13 +947,13 @@ HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int
/* Load elements on insert */
if (index != NULL)
{
Datum q = PointerGetDatum(hc->element->vec);
Datum q = hc->element->value;
for (int i = 0; i < currentNeighbors->length; i++)
{
HnswCandidate *hc3 = &currentNeighbors->items[i];
if (hc3->element->vec == NULL)
if (!DatumGetPointer(hc3->element->value))
HnswLoadElement(hc3->element, &hc3->distance, &q, index, procinfo, collation, true);
else
hc3->distance = GetCandidateDistance(hc3, q, procinfo, collation);
@@ -903,13 +971,12 @@ HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int
{
List *c = NIL;
/* Add and sort candidates */
/* Add candidates */
for (int i = 0; i < currentNeighbors->length; i++)
c = lappend(c, &currentNeighbors->items[i]);
c = lappend(c, &hc2);
list_sort(c, CompareCandidateDistances);
SelectNeighbors(c, m, lc, procinfo, collation, &pruned);
SelectNeighbors(c, m, lc, procinfo, collation, hc->element, &hc2, &pruned, true);
/* Should not happen */
if (pruned == NULL)
@@ -967,7 +1034,7 @@ HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, F
List *w;
int level = element->level;
int entryLevel;
Datum q = PointerGetDatum(element->vec);
Datum q = element->value;
HnswElement skipElement = existing ? element : NULL;
/* No neighbors if no entry point */
@@ -1008,7 +1075,12 @@ HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, F
else
lw = w;
neighbors = SelectNeighbors(lw, lm, lc, procinfo, collation, NULL);
/*
* Candidates are sorted, but not deterministically. Could set
* sortCandidates to true for in-memory builds to enable closer
* caching, but there does not seem to be a difference in performance.
*/
neighbors = SelectNeighbors(lw, lm, lc, procinfo, collation, element, NULL, NULL, false);
AddConnections(element, neighbors, lm, lc);

View File

@@ -93,7 +93,7 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
if (itemUpdated)
{
Size etupSize = HNSW_ELEMENT_TUPLE_SIZE(etup->vec.dim);
Size etupSize = HNSW_ELEMENT_TUPLE_SIZE(PointerGetDatum(&etup->value));
/* Mark rest as invalid */
for (int i = idx; i < HNSW_HEAPTIDS; i++)
@@ -481,6 +481,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
HnswNeighborTuple ntup;
Size etupSize;
Size ntupSize;
Datum value;
Buffer nbuf;
Page npage;
BlockNumber neighborPage;
@@ -504,8 +505,11 @@ MarkDeleted(HnswVacuumState * vacuumstate)
if (ItemPointerIsValid(&etup->heaptids[0]))
continue;
/* Get datum */
value = PointerGetDatum(&etup->value);
/* Calculate sizes */
etupSize = HNSW_ELEMENT_TUPLE_SIZE(etup->vec.dim);
etupSize = HNSW_ELEMENT_TUPLE_SIZE(value);
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(etup->level, vacuumstate->m);
/* Get neighbor page */
@@ -528,7 +532,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
/* Overwrite element */
etup->deleted = 1;
MemSet(&etup->vec.x, 0, etup->vec.dim * sizeof(float));
MemSet(&etup->value, 0, VARSIZE_ANY(value));
/* Overwrite neighbors */
for (int i = 0; i < ntup->count; i++)

View File

@@ -246,8 +246,6 @@ typedef struct IvfflatScanOpaqueData
int probes;
int dimensions;
bool first;
Buffer buf;
ItemPointerData heaptid;
/* Sorting */
Tuplesortstate *sortstate;

View File

@@ -143,10 +143,6 @@ GetScanItems(IndexScanDesc scan, Datum value)
bool isnull;
ItemId itemid = PageGetItemId(page, offno);
/* Skip dead tuples */
if (scan->ignore_killed_tuples && ItemIdIsDead(itemid))
continue;
itup = (IndexTuple) PageGetItem(page, itemid);
datum = index_getattr(itup, 1, tupdesc, &isnull);
@@ -161,8 +157,6 @@ GetScanItems(IndexScanDesc scan, Datum value)
slot->tts_isnull[0] = false;
slot->tts_values[1] = PointerGetDatum(&itup->t_tid);
slot->tts_isnull[1] = false;
slot->tts_values[2] = Int32GetDatum((int) searchPage);
slot->tts_isnull[2] = false;
ExecStoreVirtualTuple(slot);
tuplesort_puttupleslot(so->sortstate, slot);
@@ -187,55 +181,6 @@ GetScanItems(IndexScanDesc scan, Datum value)
tuplesort_performsort(so->sortstate);
}
/*
* Mark prior tuple as dead
*/
static void
MarkPriorTupleDead(IndexScanDesc scan)
{
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
Buffer buf = so->buf;
Page page;
OffsetNumber maxoffno;
/* Safety check */
if (!BufferIsValid(so->buf) || !ItemPointerIsValid(&so->heaptid))
return;
/* Only a shared locked is needed for ItemIdMarkDead */
LockBuffer(buf, BUFFER_LOCK_SHARE);
page = BufferGetPage(buf);
maxoffno = PageGetMaxOffsetNumber(page);
for (OffsetNumber offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
{
ItemId itemid = PageGetItemId(page, offno);
IndexTuple itup = (IndexTuple) PageGetItem(page, itemid);
/*
* Find tuple. Since buffer has been pinned, tuple cannot have been
* vacuumed (and heap TID reused).
*/
if (ItemPointerEquals(&itup->t_tid, &so->heaptid))
{
/*
* Make sure tuple has not already been marked dead to avoid extra
* WAL if wal_log_hints or data checksums enabled
*/
if (!ItemIdIsDead(itemid))
{
ItemIdMarkDead(itemid);
MarkBufferDirtyHint(buf, true);
}
break;
}
}
/* Unlock buffer */
LockBuffer(buf, BUFFER_LOCK_UNLOCK);
}
/*
* Prepare for an index scan
*/
@@ -261,9 +206,7 @@ ivfflatbeginscan(Relation index, int nkeys, int norderbys)
probes = lists;
so = (IvfflatScanOpaque) palloc(offsetof(IvfflatScanOpaqueData, lists) + probes * sizeof(IvfflatScanList));
so->buf = InvalidBuffer;
so->first = true;
ItemPointerSetInvalid(&so->heaptid);
so->probes = probes;
so->dimensions = dimensions;
@@ -274,13 +217,12 @@ ivfflatbeginscan(Relation index, int nkeys, int norderbys)
/* Create tuple description for sorting */
#if PG_VERSION_NUM >= 120000
so->tupdesc = CreateTemplateTupleDesc(3);
so->tupdesc = CreateTemplateTupleDesc(2);
#else
so->tupdesc = CreateTemplateTupleDesc(3, false);
so->tupdesc = CreateTemplateTupleDesc(2, false);
#endif
TupleDescInitEntry(so->tupdesc, (AttrNumber) 1, "distance", FLOAT8OID, -1, 0);
TupleDescInitEntry(so->tupdesc, (AttrNumber) 2, "heaptid", TIDOID, -1, 0);
TupleDescInitEntry(so->tupdesc, (AttrNumber) 3, "indexblkno", INT4OID, -1, 0);
/* Prep sort */
so->sortstate = tuplesort_begin_heap(so->tupdesc, 1, attNums, sortOperators, sortCollations, nullsFirstFlags, work_mem, NULL, false);
@@ -312,7 +254,6 @@ ivfflatrescan(IndexScanDesc scan, ScanKey keys, int nkeys, ScanKey orderbys, int
#endif
so->first = true;
ItemPointerSetInvalid(&so->heaptid);
pairingheap_reset(so->listQueue);
if (keys && scan->numberOfKeys > 0)
@@ -347,6 +288,11 @@ ivfflatgettuple(IndexScanDesc scan, ScanDirection dir)
if (scan->orderByData == NULL)
elog(ERROR, "cannot scan ivfflat index without order");
/* Requires MVCC-compliant snapshot as not able to pin during sorting */
/* https://www.postgresql.org/docs/current/index-locking.html */
if (!IsMVCCSnapshot(scan->xs_snapshot))
elog(ERROR, "non-MVCC snapshots are not supported with ivfflat");
if (scan->orderByData->sk_flags & SK_ISNULL)
value = PointerGetDatum(InitVector(so->dimensions));
else
@@ -370,17 +316,10 @@ ivfflatgettuple(IndexScanDesc scan, ScanDirection dir)
if (value != scan->orderByData->sk_argument)
pfree(DatumGetPointer(value));
}
else
{
/* Mark prior tuple as dead */
if (scan->kill_prior_tuple)
MarkPriorTupleDead(scan);
}
if (tuplesort_gettupleslot(so->sortstate, true, false, so->slot, NULL))
{
ItemPointer heaptid = (ItemPointer) DatumGetPointer(slot_getattr(so->slot, 2, &so->isnull));
BlockNumber indexblkno = DatumGetInt32(slot_getattr(so->slot, 3, &so->isnull));
#if PG_VERSION_NUM >= 120000
scan->xs_heaptid = *heaptid;
@@ -388,21 +327,6 @@ ivfflatgettuple(IndexScanDesc scan, ScanDirection dir)
scan->xs_ctup.t_self = *heaptid;
#endif
/* Keep track of info needed to mark tuple as dead */
so->heaptid = *heaptid;
/* Unpin buffer */
if (BufferIsValid(so->buf))
ReleaseBuffer(so->buf);
/*
* An index scan must maintain a pin on the index page holding the
* item last returned by amgettuple
*
* https://www.postgresql.org/docs/current/index-locking.html
*/
so->buf = ReadBuffer(scan->indexRelation, indexblkno);
scan->xs_recheckorderby = false;
return true;
}
@@ -418,10 +342,6 @@ ivfflatendscan(IndexScanDesc scan)
{
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
/* Release pin */
if (BufferIsValid(so->buf))
ReleaseBuffer(so->buf);
pairingheap_free(so->listQueue);
tuplesort_end(so->sortstate);

View File

@@ -1,294 +0,0 @@
#include "postgres.h"
#include <math.h>
#include <stdint.h>
#include "fmgr.h"
#include "lib/stringinfo.h"
#include "libpq/pqformat.h"
#include "tinyint.h"
#include "utils/array.h"
#include "utils/builtins.h"
#include "utils/numeric.h"
/*
* Check if array is a vector
*/
static bool
ArrayIsVector(ArrayType *a)
{
return ARR_NDIM(a) == 1 && !array_contains_nulls(a);
}
/*
* Check if dimensions are the same
*/
static int
CheckDims(ArrayType *a, ArrayType *b)
{
int dima;
int dimb;
if (!ArrayIsVector(a) || !ArrayIsVector(b))
return 0;
dima = ARR_DIMS(a)[0];
dimb = ARR_DIMS(b)[0];
if (dima != dimb)
return 0;
return dima;
}
/*
* Check range
*/
static void
CheckRange(long i)
{
if (i < INT8_MIN || i > INT8_MAX)
ereport(ERROR,
(errcode(ERRCODE_NUMERIC_VALUE_OUT_OF_RANGE),
errmsg("value \"%ld\" is out of range for type tinyint", i)));
}
/*
* Convert textual representation to internal representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_in);
Datum
tinyint_in(PG_FUNCTION_ARGS)
{
char *s = PG_GETARG_CSTRING(0);
const char *ptr = s;
long i;
char *end;
/* skip leading spaces */
while (*ptr != '\0' && isspace((unsigned char) *ptr))
ptr++;
if (*ptr == '\0')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type tinyint: \"%s\"", s)));
i = strtol(ptr, &end, 10);
ptr = end;
if (i < INT8_MIN || i > INT8_MAX)
ereport(ERROR,
(errcode(ERRCODE_NUMERIC_VALUE_OUT_OF_RANGE),
errmsg("value \"%s\" is out of range for type tinyint", s)));
/* allow trailing whitespace, but not other trailing chars */
while (*ptr != '\0' && isspace((unsigned char) *ptr))
ptr++;
if (*ptr != '\0')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type tinyint: \"%s\"", s)));
PG_RETURN_INT8(i);
}
/*
* Convert internal representation to textual representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_out);
Datum
tinyint_out(PG_FUNCTION_ARGS)
{
int8 num = PG_GETARG_INT8(0);
char *result = (char *) palloc(5); /* sign, 3 digits, '\0' */
pg_ltoa((int32) num, result);
PG_RETURN_CSTRING(result);
}
/*
* Convert external binary representation to internal representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_recv);
Datum
tinyint_recv(PG_FUNCTION_ARGS)
{
StringInfo buf = (StringInfo) PG_GETARG_POINTER(0);
PG_RETURN_INT8((int8) pq_getmsgint(buf, sizeof(int8)));
}
/*
* Convert internal representation to the external binary representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_send);
Datum
tinyint_send(PG_FUNCTION_ARGS)
{
int8 arg1 = PG_GETARG_INT8(0);
StringInfoData buf;
pq_begintypsend(&buf);
pq_sendint8(&buf, arg1);
PG_RETURN_BYTEA_P(pq_endtypsend(&buf));
}
/*
* Convert integer to tinyint
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(integer_to_tinyint);
Datum
integer_to_tinyint(PG_FUNCTION_ARGS)
{
int32 i = PG_GETARG_INT32(0);
CheckRange(i);
PG_RETURN_INT8(i);
}
/*
* Convert numeric to tinyint
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(numeric_to_tinyint);
Datum
numeric_to_tinyint(PG_FUNCTION_ARGS)
{
Numeric num = PG_GETARG_NUMERIC(0);
int32 i = numeric_int4_opt_error(num, NULL);
CheckRange(i);
PG_RETURN_INT8(i);
}
/*
* Get the L2 distance between tinyint arrays
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_l2_distance);
Datum
tinyint_l2_distance(PG_FUNCTION_ARGS)
{
ArrayType *a = PG_GETARG_ARRAYTYPE_P(0);
ArrayType *b = PG_GETARG_ARRAYTYPE_P(1);
int8 *ax = (int8 *) ARR_DATA_PTR(a);
int8 *bx = (int8 *) ARR_DATA_PTR(b);
double distance = 0.0;
int dim = CheckDims(a, b);
/* TODO Decide on error or NULL */
if (!dim)
PG_RETURN_NULL();
/* Auto-vectorized */
for (int i = 0; i < dim; i++)
{
double diff = ax[i] - bx[i];
distance += diff * diff;
}
PG_RETURN_FLOAT8(sqrt(distance));
}
/*
* Get the inner product of two tinyint arrays
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_inner_product);
Datum
tinyint_inner_product(PG_FUNCTION_ARGS)
{
ArrayType *a = PG_GETARG_ARRAYTYPE_P(0);
ArrayType *b = PG_GETARG_ARRAYTYPE_P(1);
int8 *ax = (int8 *) ARR_DATA_PTR(a);
int8 *bx = (int8 *) ARR_DATA_PTR(b);
double distance = 0.0;
int dim = CheckDims(a, b);
/* TODO Decide on error or NULL */
if (!dim)
PG_RETURN_NULL();
/* Auto-vectorized */
for (int i = 0; i < dim; i++)
distance += ax[i] * bx[i];
PG_RETURN_FLOAT8(distance);
}
/*
* Get the negative inner product of two tinyint arrays
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_negative_inner_product);
Datum
tinyint_negative_inner_product(PG_FUNCTION_ARGS)
{
ArrayType *a = PG_GETARG_ARRAYTYPE_P(0);
ArrayType *b = PG_GETARG_ARRAYTYPE_P(1);
int8 *ax = (int8 *) ARR_DATA_PTR(a);
int8 *bx = (int8 *) ARR_DATA_PTR(b);
double distance = 0.0;
int dim = CheckDims(a, b);
/* TODO Decide on error or NULL */
if (!dim)
PG_RETURN_NULL();
/* Auto-vectorized */
for (int i = 0; i < dim; i++)
distance += ax[i] * bx[i];
PG_RETURN_FLOAT8(distance * -1);
}
/*
* Get the cosine distance between two float2 arrays
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(tinyint_cosine_distance);
Datum
tinyint_cosine_distance(PG_FUNCTION_ARGS)
{
ArrayType *a = PG_GETARG_ARRAYTYPE_P(0);
ArrayType *b = PG_GETARG_ARRAYTYPE_P(1);
int8 *ax = (int8 *) ARR_DATA_PTR(a);
int8 *bx = (int8 *) ARR_DATA_PTR(b);
double distance = 0.0;
double norma = 0.0;
double normb = 0.0;
double similarity;
int dim = CheckDims(a, b);
/* TODO Decide on error or NULL */
if (!dim)
PG_RETURN_NULL();
/* Auto-vectorized */
for (int i = 0; i < dim; i++)
{
float axi = ax[i];
float bxi = bx[i];
distance += axi * bxi;
norma += axi * axi;
normb += bxi * bxi;
}
/* Use sqrt(a * b) over sqrt(a) * sqrt(b) */
similarity = distance / sqrt(norma * normb);
#ifdef _MSC_VER
/* /fp:fast may not propagate NaN */
if (isnan(similarity))
PG_RETURN_FLOAT8(NAN);
#endif
/* Keep in range */
if (similarity > 1)
similarity = 1;
else if (similarity < -1)
similarity = -1;
PG_RETURN_FLOAT8(1 - similarity);
}

View File

@@ -1,8 +0,0 @@
#ifndef TINYINT_H
#define TINYINT_H
#define DatumGetInt8(X) ((int8) (X))
#define PG_GETARG_INT8(n) DatumGetInt8(PG_GETARG_DATUM(n))
#define PG_RETURN_INT8(x) return Int8GetDatum(x)
#endif

View File

@@ -54,85 +54,85 @@ SELECT vector_norm('[3e37,4e37]')::real;
5e+37
(1 row)
SELECT l2_distance('[0,0]'::vector, '[3,4]');
SELECT l2_distance('[0,0]', '[3,4]');
l2_distance
-------------
5
(1 row)
SELECT l2_distance('[0,0]'::vector, '[0,1]');
SELECT l2_distance('[0,0]', '[0,1]');
l2_distance
-------------
1
(1 row)
SELECT l2_distance('[1,2]'::vector, '[3]');
SELECT l2_distance('[1,2]', '[3]');
ERROR: different vector dimensions 2 and 1
SELECT l2_distance('[3e38]'::vector, '[-3e38]');
SELECT l2_distance('[3e38]', '[-3e38]');
l2_distance
-------------
Infinity
(1 row)
SELECT inner_product('[1,2]'::vector, '[3,4]');
SELECT inner_product('[1,2]', '[3,4]');
inner_product
---------------
11
(1 row)
SELECT inner_product('[1,2]'::vector, '[3]');
SELECT inner_product('[1,2]', '[3]');
ERROR: different vector dimensions 2 and 1
SELECT inner_product('[3e38]'::vector, '[3e38]');
SELECT inner_product('[3e38]', '[3e38]');
inner_product
---------------
Infinity
(1 row)
SELECT cosine_distance('[1,2]'::vector, '[2,4]');
SELECT cosine_distance('[1,2]', '[2,4]');
cosine_distance
-----------------
0
(1 row)
SELECT cosine_distance('[1,2]'::vector, '[0,0]');
SELECT cosine_distance('[1,2]', '[0,0]');
cosine_distance
-----------------
NaN
(1 row)
SELECT cosine_distance('[1,1]'::vector, '[1,1]');
SELECT cosine_distance('[1,1]', '[1,1]');
cosine_distance
-----------------
0
(1 row)
SELECT cosine_distance('[1,0]'::vector, '[0,2]');
SELECT cosine_distance('[1,0]', '[0,2]');
cosine_distance
-----------------
1
(1 row)
SELECT cosine_distance('[1,1]'::vector, '[-1,-1]');
SELECT cosine_distance('[1,1]', '[-1,-1]');
cosine_distance
-----------------
2
(1 row)
SELECT cosine_distance('[1,2]'::vector, '[3]');
SELECT cosine_distance('[1,2]', '[3]');
ERROR: different vector dimensions 2 and 1
SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]');
SELECT cosine_distance('[1,1]', '[1.1,1.1]');
cosine_distance
-----------------
0
(1 row)
SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]');
SELECT cosine_distance('[1,1]', '[-1.1,-1.1]');
cosine_distance
-----------------
2
(1 row)
SELECT cosine_distance('[3e38]'::vector, '[3e38]');
SELECT cosine_distance('[3e38]', '[3e38]');
cosine_distance
-----------------
NaN

View File

@@ -1,148 +0,0 @@
SELECT '127'::tinyint;
tinyint
---------
127
(1 row)
SELECT '128'::tinyint;
ERROR: value "128" is out of range for type tinyint
LINE 1: SELECT '128'::tinyint;
^
SELECT '-128'::tinyint;
tinyint
---------
-128
(1 row)
SELECT '-129'::tinyint;
ERROR: value "-129" is out of range for type tinyint
LINE 1: SELECT '-129'::tinyint;
^
SELECT ''::tinyint;
ERROR: invalid input syntax for type tinyint: ""
LINE 1: SELECT ''::tinyint;
^
SELECT ' 1'::tinyint;
tinyint
---------
1
(1 row)
SELECT '1 '::tinyint;
tinyint
---------
1
(1 row)
SELECT '1a'::tinyint;
ERROR: invalid input syntax for type tinyint: "1a"
LINE 1: SELECT '1a'::tinyint;
^
SELECT '{1,2,3}'::tinyint[];
tinyint
---------
{1,2,3}
(1 row)
SELECT '128'::numeric::tinyint;
ERROR: value "128" is out of range for type tinyint
SELECT 'NaN'::numeric::tinyint;
ERROR: cannot convert NaN to integer
SELECT l2_distance('{0,0}'::tinyint[], '{3,4}'::tinyint[]);
l2_distance
-------------
5
(1 row)
SELECT l2_distance('{0,0}'::tinyint[], '{0,1}'::tinyint[]);
l2_distance
-------------
1
(1 row)
SELECT l2_distance('{1,2}'::tinyint[], '{3}'::tinyint[]);
l2_distance
-------------
(1 row)
SELECT l2_distance('{3e38}'::tinyint[], '{-3e38}'::tinyint[]);
ERROR: invalid input syntax for type tinyint: "3e38"
LINE 1: SELECT l2_distance('{3e38}'::tinyint[], '{-3e38}'::tinyint[]...
^
SELECT '{0,0}'::tinyint[] <-> '{3,4}'::tinyint[];
?column?
----------
5
(1 row)
SELECT inner_product('{1,2}'::tinyint[], '{3,4}'::tinyint[]);
inner_product
---------------
11
(1 row)
SELECT inner_product('{1,2}'::tinyint[], '{3}'::tinyint[]);
inner_product
---------------
(1 row)
SELECT inner_product('{127}'::tinyint[], '{127}'::tinyint[]);
inner_product
---------------
16129
(1 row)
SELECT '{1,2}'::tinyint[] <#> '{3,4}'::tinyint[];
?column?
----------
-11
(1 row)
SELECT cosine_distance('{1,2}'::tinyint[], '{2,4}'::tinyint[]);
cosine_distance
-----------------
0
(1 row)
SELECT cosine_distance('{1,2}'::tinyint[], '{0,0}'::tinyint[]);
cosine_distance
-----------------
NaN
(1 row)
SELECT cosine_distance('{1,1}'::tinyint[], '{1,1}'::tinyint[]);
cosine_distance
-----------------
0
(1 row)
SELECT cosine_distance('{1,0}'::tinyint[], '{0,2}'::tinyint[]);
cosine_distance
-----------------
1
(1 row)
SELECT cosine_distance('{1,1}'::tinyint[], '{-1,-1}'::tinyint[]);
cosine_distance
-----------------
2
(1 row)
SELECT cosine_distance('{1,2}'::tinyint[], '{3}'::tinyint[]);
cosine_distance
-----------------
(1 row)
SELECT cosine_distance('{3e38}'::tinyint[], '{3e38}'::tinyint[]);
ERROR: invalid input syntax for type tinyint: "3e38"
LINE 1: SELECT cosine_distance('{3e38}'::tinyint[], '{3e38}'::tinyin...
^
SELECT '{1,2}'::tinyint[] <=> '{2,4}'::tinyint[];
?column?
----------
0
(1 row)

View File

@@ -13,24 +13,24 @@ SELECT vector_norm('[3,4]');
SELECT vector_norm('[0,1]');
SELECT vector_norm('[3e37,4e37]')::real;
SELECT l2_distance('[0,0]'::vector, '[3,4]');
SELECT l2_distance('[0,0]'::vector, '[0,1]');
SELECT l2_distance('[1,2]'::vector, '[3]');
SELECT l2_distance('[3e38]'::vector, '[-3e38]');
SELECT l2_distance('[0,0]', '[3,4]');
SELECT l2_distance('[0,0]', '[0,1]');
SELECT l2_distance('[1,2]', '[3]');
SELECT l2_distance('[3e38]', '[-3e38]');
SELECT inner_product('[1,2]'::vector, '[3,4]');
SELECT inner_product('[1,2]'::vector, '[3]');
SELECT inner_product('[3e38]'::vector, '[3e38]');
SELECT inner_product('[1,2]', '[3,4]');
SELECT inner_product('[1,2]', '[3]');
SELECT inner_product('[3e38]', '[3e38]');
SELECT cosine_distance('[1,2]'::vector, '[2,4]');
SELECT cosine_distance('[1,2]'::vector, '[0,0]');
SELECT cosine_distance('[1,1]'::vector, '[1,1]');
SELECT cosine_distance('[1,0]'::vector, '[0,2]');
SELECT cosine_distance('[1,1]'::vector, '[-1,-1]');
SELECT cosine_distance('[1,2]'::vector, '[3]');
SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]');
SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]');
SELECT cosine_distance('[3e38]'::vector, '[3e38]');
SELECT cosine_distance('[1,2]', '[2,4]');
SELECT cosine_distance('[1,2]', '[0,0]');
SELECT cosine_distance('[1,1]', '[1,1]');
SELECT cosine_distance('[1,0]', '[0,2]');
SELECT cosine_distance('[1,1]', '[-1,-1]');
SELECT cosine_distance('[1,2]', '[3]');
SELECT cosine_distance('[1,1]', '[1.1,1.1]');
SELECT cosine_distance('[1,1]', '[-1.1,-1.1]');
SELECT cosine_distance('[3e38]', '[3e38]');
SELECT l1_distance('[0,0]', '[3,4]');
SELECT l1_distance('[0,0]', '[0,1]');

View File

@@ -1,34 +0,0 @@
SELECT '127'::tinyint;
SELECT '128'::tinyint;
SELECT '-128'::tinyint;
SELECT '-129'::tinyint;
SELECT ''::tinyint;
SELECT ' 1'::tinyint;
SELECT '1 '::tinyint;
SELECT '1a'::tinyint;
SELECT '{1,2,3}'::tinyint[];
SELECT '128'::numeric::tinyint;
SELECT 'NaN'::numeric::tinyint;
SELECT l2_distance('{0,0}'::tinyint[], '{3,4}'::tinyint[]);
SELECT l2_distance('{0,0}'::tinyint[], '{0,1}'::tinyint[]);
SELECT l2_distance('{1,2}'::tinyint[], '{3}'::tinyint[]);
SELECT l2_distance('{3e38}'::tinyint[], '{-3e38}'::tinyint[]);
SELECT '{0,0}'::tinyint[] <-> '{3,4}'::tinyint[];
SELECT inner_product('{1,2}'::tinyint[], '{3,4}'::tinyint[]);
SELECT inner_product('{1,2}'::tinyint[], '{3}'::tinyint[]);
SELECT inner_product('{127}'::tinyint[], '{127}'::tinyint[]);
SELECT '{1,2}'::tinyint[] <#> '{3,4}'::tinyint[];
SELECT cosine_distance('{1,2}'::tinyint[], '{2,4}'::tinyint[]);
SELECT cosine_distance('{1,2}'::tinyint[], '{0,0}'::tinyint[]);
SELECT cosine_distance('{1,1}'::tinyint[], '{1,1}'::tinyint[]);
SELECT cosine_distance('{1,0}'::tinyint[], '{0,2}'::tinyint[]);
SELECT cosine_distance('{1,1}'::tinyint[], '{-1,-1}'::tinyint[]);
SELECT cosine_distance('{1,2}'::tinyint[], '{3}'::tinyint[]);
SELECT cosine_distance('{3e38}'::tinyint[], '{3e38}'::tinyint[]);
SELECT '{1,2}'::tinyint[] <=> '{2,4}'::tinyint[];

113
test/t/019_hnsw_array.pl Normal file
View File

@@ -0,0 +1,113 @@
use strict;
use warnings;
use PostgresNode;
use TestLib;
use Test::More;
my $node;
my @queries = ();
my @expected;
my $limit = 20;
sub test_recall
{
my ($min, $operator) = @_;
my $correct = 0;
my $total = 0;
my $explain = $node->safe_psql("postgres", qq(
SET enable_seqscan = off;
EXPLAIN ANALYZE SELECT i FROM tst ORDER BY v $operator '$queries[0]' LIMIT $limit;
));
like($explain, qr/Index Scan/);
for my $i (0 .. $#queries)
{
my $actual = $node->safe_psql("postgres", qq(
SET enable_seqscan = off;
SELECT i FROM tst ORDER BY v $operator '$queries[$i]' LIMIT $limit;
));
my @actual_ids = split("\n", $actual);
my %actual_set = map { $_ => 1 } @actual_ids;
my @expected_ids = split("\n", $expected[$i]);
foreach (@expected_ids)
{
if (exists($actual_set{$_}))
{
$correct++;
}
$total++;
}
}
cmp_ok($correct / $total, ">=", $min, $operator);
}
# Initialize node
$node = get_new_node('node');
$node->init;
$node->start;
# Create table
$node->safe_psql("postgres", "CREATE EXTENSION vector;");
$node->safe_psql("postgres", "CREATE TABLE tst (i int4, v float4[3]);");
$node->safe_psql("postgres",
"INSERT INTO tst SELECT i, ARRAY[random(), random(), random()] FROM generate_series(1, 10000) i;"
);
$node->safe_psql("postgres", qq(
CREATE FUNCTION float4_l2_distance(float4[], float4[]) RETURNS float8
AS 'BEGIN RETURN l2_distance(\$1::vector, \$2::vector); END;'
LANGUAGE plpgsql IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION float4_l2_squared_distance(float4[], float4[]) RETURNS float8
AS 'BEGIN RETURN vector_l2_squared_distance(\$1::vector, \$2::vector); END;'
LANGUAGE plpgsql IMMUTABLE STRICT PARALLEL SAFE;
CREATE OPERATOR <-> (
LEFTARG = float4[], RIGHTARG = float4[], PROCEDURE = float4_l2_distance,
COMMUTATOR = '<->'
);
CREATE OPERATOR CLASS float4_l2_ops
FOR TYPE float4[] USING hnsw AS
OPERATOR 1 <-> (float4[], float4[]) FOR ORDER BY float_ops,
FUNCTION 1 float4_l2_squared_distance(float4[], float4[]);
));
# Generate queries
for (1 .. 20)
{
my $r1 = rand();
my $r2 = rand();
my $r3 = rand();
push(@queries, "{$r1,$r2,$r3}");
}
# Check each index type
my @operators = ("<->");
my @opclasses = ("float4_l2_ops");
for my $i (0 .. $#operators)
{
my $operator = $operators[$i];
my $opclass = $opclasses[$i];
# Get exact results
@expected = ();
foreach (@queries)
{
my $res = $node->safe_psql("postgres", "SELECT i FROM tst ORDER BY v $operator '$_' LIMIT $limit;");
push(@expected, $res);
}
# Add index
$node->safe_psql("postgres", "CREATE INDEX ON tst USING hnsw (v $opclass) WITH (dimensions = 3);");
my $min = $operator eq "<#>" ? 0.80 : 0.99;
test_recall($min, $operator);
}
done_testing();

View File

@@ -1,4 +1,4 @@
comment = 'vector data type and ivfflat and hnsw access methods'
default_version = '0.5.0'
default_version = '0.5.1'
module_pathname = '$libdir/vector'
relocatable = true