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10
.github/workflows/build.yml
vendored
10
.github/workflows/build.yml
vendored
@@ -8,6 +8,8 @@ jobs:
|
|||||||
fail-fast: false
|
fail-fast: false
|
||||||
matrix:
|
matrix:
|
||||||
include:
|
include:
|
||||||
|
- postgres: 17
|
||||||
|
os: ubuntu-22.04
|
||||||
- postgres: 16
|
- postgres: 16
|
||||||
os: ubuntu-22.04
|
os: ubuntu-22.04
|
||||||
- postgres: 15
|
- postgres: 15
|
||||||
@@ -21,7 +23,7 @@ jobs:
|
|||||||
- postgres: 11
|
- postgres: 11
|
||||||
os: ubuntu-20.04
|
os: ubuntu-20.04
|
||||||
steps:
|
steps:
|
||||||
- uses: actions/checkout@v3
|
- uses: actions/checkout@v4
|
||||||
- uses: ankane/setup-postgres@v1
|
- uses: ankane/setup-postgres@v1
|
||||||
with:
|
with:
|
||||||
postgres-version: ${{ matrix.postgres }}
|
postgres-version: ${{ matrix.postgres }}
|
||||||
@@ -43,7 +45,7 @@ jobs:
|
|||||||
runs-on: macos-latest
|
runs-on: macos-latest
|
||||||
if: ${{ !startsWith(github.ref_name, 'windows') }}
|
if: ${{ !startsWith(github.ref_name, 'windows') }}
|
||||||
steps:
|
steps:
|
||||||
- uses: actions/checkout@v3
|
- uses: actions/checkout@v4
|
||||||
- uses: ankane/setup-postgres@v1
|
- uses: ankane/setup-postgres@v1
|
||||||
with:
|
with:
|
||||||
postgres-version: 14
|
postgres-version: 14
|
||||||
@@ -60,12 +62,12 @@ jobs:
|
|||||||
wget -q https://github.com/postgres/postgres/archive/refs/tags/REL_14_5.tar.gz
|
wget -q https://github.com/postgres/postgres/archive/refs/tags/REL_14_5.tar.gz
|
||||||
tar xf REL_14_5.tar.gz
|
tar xf REL_14_5.tar.gz
|
||||||
- run: make prove_installcheck PROVE_FLAGS="-I ./postgres-REL_14_5/src/test/perl" PERL5LIB="/Users/runner/perl5/lib/perl5"
|
- run: make prove_installcheck PROVE_FLAGS="-I ./postgres-REL_14_5/src/test/perl" PERL5LIB="/Users/runner/perl5/lib/perl5"
|
||||||
- run: make clean && /usr/local/opt/llvm@15/bin/scan-build --status-bugs make
|
- run: make clean && /usr/local/opt/llvm@15/bin/scan-build --status-bugs make PG_CFLAGS="-DUSE_ASSERT_CHECKING"
|
||||||
windows:
|
windows:
|
||||||
runs-on: windows-latest
|
runs-on: windows-latest
|
||||||
if: ${{ !startsWith(github.ref_name, 'mac') }}
|
if: ${{ !startsWith(github.ref_name, 'mac') }}
|
||||||
steps:
|
steps:
|
||||||
- uses: actions/checkout@v3
|
- uses: actions/checkout@v4
|
||||||
- uses: ankane/setup-postgres@v1
|
- uses: ankane/setup-postgres@v1
|
||||||
with:
|
with:
|
||||||
postgres-version: 14
|
postgres-version: 14
|
||||||
|
|||||||
@@ -1,3 +1,11 @@
|
|||||||
|
## 0.5.2 (unreleased)
|
||||||
|
|
||||||
|
- Improved performance of HNSW
|
||||||
|
- Added support for parallel index builds for HNSW
|
||||||
|
- Reduced memory usage for HNSW index builds
|
||||||
|
- Reduced WAL generation for HNSW index builds
|
||||||
|
- Fixed `invalid memory alloc request size` error with HNSW index build
|
||||||
|
|
||||||
## 0.5.1 (2023-10-10)
|
## 0.5.1 (2023-10-10)
|
||||||
|
|
||||||
- Improved performance of HNSW index builds
|
- Improved performance of HNSW index builds
|
||||||
|
|||||||
@@ -56,7 +56,7 @@ install:
|
|||||||
copy $(EXTENSION).control "$(SHAREDIR)\extension"
|
copy $(EXTENSION).control "$(SHAREDIR)\extension"
|
||||||
copy sql\$(EXTENSION)--*.sql "$(SHAREDIR)\extension"
|
copy sql\$(EXTENSION)--*.sql "$(SHAREDIR)\extension"
|
||||||
mkdir "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
|
mkdir "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
|
||||||
copy $(HEADERS) "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
|
for %f in ($(HEADERS)) do copy %f "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
|
||||||
|
|
||||||
installcheck:
|
installcheck:
|
||||||
"$(BINDIR)\pg_regress" --bindir="$(BINDIR)" $(REGRESS_OPTS) $(REGRESS)
|
"$(BINDIR)\pg_regress" --bindir="$(BINDIR)" $(REGRESS_OPTS) $(REGRESS)
|
||||||
|
|||||||
258
README.md
258
README.md
@@ -10,7 +10,7 @@ Store your vectors with the rest of your data. Supports:
|
|||||||
|
|
||||||
Plus [ACID](https://en.wikipedia.org/wiki/ACID) compliance, point-in-time recovery, JOINs, and all of the other [great features](https://www.postgresql.org/about/) of Postgres
|
Plus [ACID](https://en.wikipedia.org/wiki/ACID) compliance, point-in-time recovery, JOINs, and all of the other [great features](https://www.postgresql.org/about/) of Postgres
|
||||||
|
|
||||||
[](https://github.com/pgvector/pgvector/actions)
|
[](https://github.com/pgvector/pgvector/actions)
|
||||||
|
|
||||||
## Installation
|
## Installation
|
||||||
|
|
||||||
@@ -26,7 +26,7 @@ make install # may need sudo
|
|||||||
|
|
||||||
See the [installation notes](#installation-notes) if you run into issues
|
See the [installation notes](#installation-notes) if you run into issues
|
||||||
|
|
||||||
You can also install it with [Docker](#docker), [Homebrew](#homebrew), [PGXN](#pgxn), [APT](#apt), [Yum](#yum), or [conda-forge](#conda-forge), and it comes preinstalled with [Postgres.app](#postgresapp) and many [hosted providers](#hosted-postgres)
|
You can also install it with [Docker](#docker), [Homebrew](#homebrew), [PGXN](#pgxn), [APT](#apt), [Yum](#yum), or [conda-forge](#conda-forge), and it comes preinstalled with [Postgres.app](#postgresapp) and many [hosted providers](#hosted-postgres). There are also instructions for [GitHub Actions](https://github.com/pgvector/setup-pgvector).
|
||||||
|
|
||||||
## Getting Started
|
## Getting Started
|
||||||
|
|
||||||
@@ -161,8 +161,97 @@ You can add an index to use approximate nearest neighbor search, which trades so
|
|||||||
|
|
||||||
Supported index types are:
|
Supported index types are:
|
||||||
|
|
||||||
- [IVFFlat](#ivfflat)
|
|
||||||
- [HNSW](#hnsw) - added in 0.5.0
|
- [HNSW](#hnsw) - added in 0.5.0
|
||||||
|
- [IVFFlat](#ivfflat)
|
||||||
|
|
||||||
|
## HNSW
|
||||||
|
|
||||||
|
An HNSW index creates a multilayer graph. It has better query performance than IVFFlat (in terms of speed-recall tradeoff), but has slower build times and uses more memory. Also, an index can be created without any data in the table since there isn’t a training step like IVFFlat.
|
||||||
|
|
||||||
|
Add an index for each distance function you want to use.
|
||||||
|
|
||||||
|
L2 distance
|
||||||
|
|
||||||
|
```sql
|
||||||
|
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops);
|
||||||
|
```
|
||||||
|
|
||||||
|
Inner product
|
||||||
|
|
||||||
|
```sql
|
||||||
|
CREATE INDEX ON items USING hnsw (embedding vector_ip_ops);
|
||||||
|
```
|
||||||
|
|
||||||
|
Cosine distance
|
||||||
|
|
||||||
|
```sql
|
||||||
|
CREATE INDEX ON items USING hnsw (embedding vector_cosine_ops);
|
||||||
|
```
|
||||||
|
|
||||||
|
Vectors with up to 2,000 dimensions can be indexed.
|
||||||
|
|
||||||
|
### Index Options
|
||||||
|
|
||||||
|
Specify HNSW parameters
|
||||||
|
|
||||||
|
- `m` - the max number of connections per layer (16 by default)
|
||||||
|
- `ef_construction` - the size of the dynamic candidate list for constructing the graph (64 by default)
|
||||||
|
|
||||||
|
```sql
|
||||||
|
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops) WITH (m = 16, ef_construction = 64);
|
||||||
|
```
|
||||||
|
|
||||||
|
A higher value of `ef_construction` provides better recall at the cost of index build time / insert speed.
|
||||||
|
|
||||||
|
### Query Options
|
||||||
|
|
||||||
|
Specify the size of the dynamic candidate list for search (40 by default)
|
||||||
|
|
||||||
|
```sql
|
||||||
|
SET hnsw.ef_search = 100;
|
||||||
|
```
|
||||||
|
|
||||||
|
A higher value provides better recall at the cost of speed.
|
||||||
|
|
||||||
|
Use `SET LOCAL` inside a transaction to set it for a single query
|
||||||
|
|
||||||
|
```sql
|
||||||
|
BEGIN;
|
||||||
|
SET LOCAL hnsw.ef_search = 100;
|
||||||
|
SELECT ...
|
||||||
|
COMMIT;
|
||||||
|
```
|
||||||
|
|
||||||
|
### Index Build Time
|
||||||
|
|
||||||
|
Indexes build significantly faster when the graph fits into `maintenance_work_mem`
|
||||||
|
|
||||||
|
```sql
|
||||||
|
SET maintenance_work_mem = '8GB';
|
||||||
|
```
|
||||||
|
|
||||||
|
A notice is shown when the graph no longer fits
|
||||||
|
|
||||||
|
```text
|
||||||
|
NOTICE: hnsw graph no longer fits into maintenance_work_mem after 100000 tuples
|
||||||
|
DETAIL: Building will take significantly more time.
|
||||||
|
HINT: Increase maintenance_work_mem to speed up builds.
|
||||||
|
```
|
||||||
|
|
||||||
|
Note: Do not set `maintenance_work_mem` so high that it exhausts the memory on the server
|
||||||
|
|
||||||
|
### Indexing Progress
|
||||||
|
|
||||||
|
Check [indexing progress](https://www.postgresql.org/docs/current/progress-reporting.html#CREATE-INDEX-PROGRESS-REPORTING) with Postgres 12+
|
||||||
|
|
||||||
|
```sql
|
||||||
|
SELECT phase, round(100.0 * blocks_done / nullif(blocks_total, 0), 1) AS "%" FROM pg_stat_progress_create_index;
|
||||||
|
```
|
||||||
|
|
||||||
|
The phases for HNSW are:
|
||||||
|
|
||||||
|
1. `initializing`
|
||||||
|
2. `loading tuples`
|
||||||
|
|
||||||
## IVFFlat
|
## IVFFlat
|
||||||
|
|
||||||
@@ -215,78 +304,22 @@ SELECT ...
|
|||||||
COMMIT;
|
COMMIT;
|
||||||
```
|
```
|
||||||
|
|
||||||
## HNSW
|
### Indexing Progress
|
||||||
|
|
||||||
An HNSW index creates a multilayer graph. It has slower build times and uses more memory than IVFFlat, but has better query performance (in terms of speed-recall tradeoff). There’s no training step like IVFFlat, so the index can be created without any data in the table.
|
|
||||||
|
|
||||||
Add an index for each distance function you want to use.
|
|
||||||
|
|
||||||
L2 distance
|
|
||||||
|
|
||||||
```sql
|
|
||||||
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops);
|
|
||||||
```
|
|
||||||
|
|
||||||
Inner product
|
|
||||||
|
|
||||||
```sql
|
|
||||||
CREATE INDEX ON items USING hnsw (embedding vector_ip_ops);
|
|
||||||
```
|
|
||||||
|
|
||||||
Cosine distance
|
|
||||||
|
|
||||||
```sql
|
|
||||||
CREATE INDEX ON items USING hnsw (embedding vector_cosine_ops);
|
|
||||||
```
|
|
||||||
|
|
||||||
Vectors with up to 2,000 dimensions can be indexed.
|
|
||||||
|
|
||||||
### Index Options
|
|
||||||
|
|
||||||
Specify HNSW parameters
|
|
||||||
|
|
||||||
- `m` - the max number of connections per layer (16 by default)
|
|
||||||
- `ef_construction` - the size of the dynamic candidate list for constructing the graph (64 by default)
|
|
||||||
|
|
||||||
```sql
|
|
||||||
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops) WITH (m = 16, ef_construction = 64);
|
|
||||||
```
|
|
||||||
|
|
||||||
### Query Options
|
|
||||||
|
|
||||||
Specify the size of the dynamic candidate list for search (40 by default)
|
|
||||||
|
|
||||||
```sql
|
|
||||||
SET hnsw.ef_search = 100;
|
|
||||||
```
|
|
||||||
|
|
||||||
A higher value provides better recall at the cost of speed.
|
|
||||||
|
|
||||||
Use `SET LOCAL` inside a transaction to set it for a single query
|
|
||||||
|
|
||||||
```sql
|
|
||||||
BEGIN;
|
|
||||||
SET LOCAL hnsw.ef_search = 100;
|
|
||||||
SELECT ...
|
|
||||||
COMMIT;
|
|
||||||
```
|
|
||||||
|
|
||||||
## Indexing Progress
|
|
||||||
|
|
||||||
Check [indexing progress](https://www.postgresql.org/docs/current/progress-reporting.html#CREATE-INDEX-PROGRESS-REPORTING) with Postgres 12+
|
Check [indexing progress](https://www.postgresql.org/docs/current/progress-reporting.html#CREATE-INDEX-PROGRESS-REPORTING) with Postgres 12+
|
||||||
|
|
||||||
```sql
|
```sql
|
||||||
SELECT phase, tuples_done, tuples_total FROM pg_stat_progress_create_index;
|
SELECT phase, round(100.0 * tuples_done / nullif(tuples_total, 0), 1) AS "%" FROM pg_stat_progress_create_index;
|
||||||
```
|
```
|
||||||
|
|
||||||
The phases are:
|
The phases for IVFFlat are:
|
||||||
|
|
||||||
1. `initializing`
|
1. `initializing`
|
||||||
2. `performing k-means` - IVFFlat only
|
2. `performing k-means`
|
||||||
3. `assigning tuples` - IVFFlat only
|
3. `assigning tuples`
|
||||||
4. `loading tuples`
|
4. `loading tuples`
|
||||||
|
|
||||||
Note: `tuples_done` and `tuples_total` are only populated during the `loading tuples` phase
|
Note: `%` is only populated during the `loading tuples` phase
|
||||||
|
|
||||||
## Filtering
|
## Filtering
|
||||||
|
|
||||||
@@ -305,8 +338,7 @@ CREATE INDEX ON items (category_id);
|
|||||||
Or a [partial index](https://www.postgresql.org/docs/current/indexes-partial.html) on the vector column for approximate search
|
Or a [partial index](https://www.postgresql.org/docs/current/indexes-partial.html) on the vector column for approximate search
|
||||||
|
|
||||||
```sql
|
```sql
|
||||||
CREATE INDEX ON items USING ivfflat (embedding vector_l2_ops) WITH (lists = 100)
|
CREATE INDEX ON items USING hnsw (embedding vector_l2_ops) WHERE (category_id = 123);
|
||||||
WHERE (category_id = 123);
|
|
||||||
```
|
```
|
||||||
|
|
||||||
Use [partitioning](https://www.postgresql.org/docs/current/ddl-partitioning.html) for approximate search on many different values of the `WHERE` columns
|
Use [partitioning](https://www.postgresql.org/docs/current/ddl-partitioning.html) for approximate search on many different values of the `WHERE` columns
|
||||||
@@ -317,13 +349,15 @@ CREATE TABLE items (embedding vector(3), category_id int) PARTITION BY LIST(cate
|
|||||||
|
|
||||||
## Hybrid Search
|
## Hybrid Search
|
||||||
|
|
||||||
Use together with Postgres [full-text search](https://www.postgresql.org/docs/current/textsearch-intro.html) for hybrid search ([Python example](https://github.com/pgvector/pgvector-python/blob/master/examples/hybrid_search.py)).
|
Use together with Postgres [full-text search](https://www.postgresql.org/docs/current/textsearch-intro.html) for hybrid search.
|
||||||
|
|
||||||
```sql
|
```sql
|
||||||
SELECT id, content FROM items, plainto_tsquery('hello search') query
|
SELECT id, content FROM items, plainto_tsquery('hello search') query
|
||||||
WHERE textsearch @@ query ORDER BY ts_rank_cd(textsearch, query) DESC LIMIT 5;
|
WHERE textsearch @@ query ORDER BY ts_rank_cd(textsearch, query) DESC LIMIT 5;
|
||||||
```
|
```
|
||||||
|
|
||||||
|
You can use [Reciprocal Rank Fusion](https://github.com/pgvector/pgvector-python/blob/master/examples/hybrid_search_rrf.py) or a [cross-encoder](https://github.com/pgvector/pgvector-python/blob/master/examples/hybrid_search.py) to combine results.
|
||||||
|
|
||||||
## Performance
|
## Performance
|
||||||
|
|
||||||
Use `EXPLAIN ANALYZE` to debug performance.
|
Use `EXPLAIN ANALYZE` to debug performance.
|
||||||
@@ -360,17 +394,21 @@ Use pgvector from any language with a Postgres client. You can even generate and
|
|||||||
|
|
||||||
Language | Libraries / Examples
|
Language | Libraries / Examples
|
||||||
--- | ---
|
--- | ---
|
||||||
|
C | [pgvector-c](https://github.com/pgvector/pgvector-c)
|
||||||
C++ | [pgvector-cpp](https://github.com/pgvector/pgvector-cpp)
|
C++ | [pgvector-cpp](https://github.com/pgvector/pgvector-cpp)
|
||||||
C# | [pgvector-dotnet](https://github.com/pgvector/pgvector-dotnet)
|
C#, F#, Visual Basic | [pgvector-dotnet](https://github.com/pgvector/pgvector-dotnet)
|
||||||
Crystal | [pgvector-crystal](https://github.com/pgvector/pgvector-crystal)
|
Crystal | [pgvector-crystal](https://github.com/pgvector/pgvector-crystal)
|
||||||
Dart | [pgvector-dart](https://github.com/pgvector/pgvector-dart)
|
Dart | [pgvector-dart](https://github.com/pgvector/pgvector-dart)
|
||||||
Elixir | [pgvector-elixir](https://github.com/pgvector/pgvector-elixir)
|
Elixir | [pgvector-elixir](https://github.com/pgvector/pgvector-elixir)
|
||||||
Go | [pgvector-go](https://github.com/pgvector/pgvector-go)
|
Go | [pgvector-go](https://github.com/pgvector/pgvector-go)
|
||||||
Haskell | [pgvector-haskell](https://github.com/pgvector/pgvector-haskell)
|
Haskell | [pgvector-haskell](https://github.com/pgvector/pgvector-haskell)
|
||||||
Java, Scala | [pgvector-java](https://github.com/pgvector/pgvector-java)
|
Java, Kotlin, Groovy, Scala | [pgvector-java](https://github.com/pgvector/pgvector-java)
|
||||||
|
JavaScript, TypeScript | [pgvector-node](https://github.com/pgvector/pgvector-node)
|
||||||
Julia | [pgvector-julia](https://github.com/pgvector/pgvector-julia)
|
Julia | [pgvector-julia](https://github.com/pgvector/pgvector-julia)
|
||||||
|
Lisp | [pgvector-lisp](https://github.com/pgvector/pgvector-lisp)
|
||||||
Lua | [pgvector-lua](https://github.com/pgvector/pgvector-lua)
|
Lua | [pgvector-lua](https://github.com/pgvector/pgvector-lua)
|
||||||
Node.js | [pgvector-node](https://github.com/pgvector/pgvector-node)
|
Nim | [pgvector-nim](https://github.com/pgvector/pgvector-nim)
|
||||||
|
OCaml | [pgvector-ocaml](https://github.com/pgvector/pgvector-ocaml)
|
||||||
Perl | [pgvector-perl](https://github.com/pgvector/pgvector-perl)
|
Perl | [pgvector-perl](https://github.com/pgvector/pgvector-perl)
|
||||||
PHP | [pgvector-php](https://github.com/pgvector/pgvector-php)
|
PHP | [pgvector-php](https://github.com/pgvector/pgvector-php)
|
||||||
Python | [pgvector-python](https://github.com/pgvector/pgvector-python)
|
Python | [pgvector-python](https://github.com/pgvector/pgvector-python)
|
||||||
@@ -378,6 +416,7 @@ R | [pgvector-r](https://github.com/pgvector/pgvector-r)
|
|||||||
Ruby | [pgvector-ruby](https://github.com/pgvector/pgvector-ruby), [Neighbor](https://github.com/ankane/neighbor)
|
Ruby | [pgvector-ruby](https://github.com/pgvector/pgvector-ruby), [Neighbor](https://github.com/ankane/neighbor)
|
||||||
Rust | [pgvector-rust](https://github.com/pgvector/pgvector-rust)
|
Rust | [pgvector-rust](https://github.com/pgvector/pgvector-rust)
|
||||||
Swift | [pgvector-swift](https://github.com/pgvector/pgvector-swift)
|
Swift | [pgvector-swift](https://github.com/pgvector/pgvector-swift)
|
||||||
|
Zig | [pgvector-zig](https://github.com/pgvector/pgvector-zig)
|
||||||
|
|
||||||
## Frequently Asked Questions
|
## Frequently Asked Questions
|
||||||
|
|
||||||
@@ -393,6 +432,63 @@ Yes, pgvector uses the write-ahead log (WAL), which allows for replication and p
|
|||||||
|
|
||||||
You’ll need to use [dimensionality reduction](https://en.wikipedia.org/wiki/Dimensionality_reduction) at the moment.
|
You’ll need to use [dimensionality reduction](https://en.wikipedia.org/wiki/Dimensionality_reduction) at the moment.
|
||||||
|
|
||||||
|
#### Can I store vectors with different dimensions in the same column?
|
||||||
|
|
||||||
|
You can use `vector` as the type (instead of `vector(3)`).
|
||||||
|
|
||||||
|
```sql
|
||||||
|
CREATE TABLE embeddings (model_id bigint, item_id bigint, embedding vector, PRIMARY KEY (model_id, item_id));
|
||||||
|
```
|
||||||
|
|
||||||
|
However, you can only create indexes on rows with the same number of dimensions (using [expression](https://www.postgresql.org/docs/current/indexes-expressional.html) and [partial](https://www.postgresql.org/docs/current/indexes-partial.html) indexing):
|
||||||
|
|
||||||
|
```sql
|
||||||
|
CREATE INDEX ON embeddings USING hnsw ((embedding::vector(3)) vector_l2_ops) WHERE (model_id = 123);
|
||||||
|
```
|
||||||
|
|
||||||
|
and query with:
|
||||||
|
|
||||||
|
```sql
|
||||||
|
SELECT * FROM embeddings WHERE model_id = 123 ORDER BY embedding::vector(3) <-> '[3,1,2]' LIMIT 5;
|
||||||
|
```
|
||||||
|
|
||||||
|
#### Can I store vectors with more precision?
|
||||||
|
|
||||||
|
You can use the `double precision[]` or `numeric[]` type to store vectors with more precision.
|
||||||
|
|
||||||
|
```sql
|
||||||
|
CREATE TABLE items (id bigserial PRIMARY KEY, embedding double precision[]);
|
||||||
|
|
||||||
|
-- use {} instead of [] for Postgres arrays
|
||||||
|
INSERT INTO items (embedding) VALUES ('{1,2,3}'), ('{4,5,6}');
|
||||||
|
```
|
||||||
|
|
||||||
|
Optionally, add a [check constraint](https://www.postgresql.org/docs/current/ddl-constraints.html) to ensure data can be converted to the `vector` type and has the expected dimensions.
|
||||||
|
|
||||||
|
```sql
|
||||||
|
ALTER TABLE items ADD CHECK (vector_dims(embedding::vector) = 3);
|
||||||
|
```
|
||||||
|
|
||||||
|
Use [expression indexing](https://www.postgresql.org/docs/current/indexes-expressional.html) to index (at a lower precision):
|
||||||
|
|
||||||
|
```sql
|
||||||
|
CREATE INDEX ON items USING hnsw ((embedding::vector(3)) vector_l2_ops);
|
||||||
|
```
|
||||||
|
|
||||||
|
and query with:
|
||||||
|
|
||||||
|
```sql
|
||||||
|
SELECT * FROM items ORDER BY embedding::vector(3) <-> '[3,1,2]' LIMIT 5;
|
||||||
|
```
|
||||||
|
|
||||||
|
#### Do indexes need to fit into memory?
|
||||||
|
|
||||||
|
No, but like other index types, you’ll likely see better performance if they do. You can get the size of an index with:
|
||||||
|
|
||||||
|
```sql
|
||||||
|
SELECT pg_size_pretty(pg_relation_size('index_name'));
|
||||||
|
```
|
||||||
|
|
||||||
## Troubleshooting
|
## Troubleshooting
|
||||||
|
|
||||||
#### Why isn’t a query using an index?
|
#### Why isn’t a query using an index?
|
||||||
@@ -406,6 +502,8 @@ SELECT ...
|
|||||||
COMMIT;
|
COMMIT;
|
||||||
```
|
```
|
||||||
|
|
||||||
|
Also, if the table is small, a table scan may be faster.
|
||||||
|
|
||||||
#### Why isn’t a query using a parallel table scan?
|
#### Why isn’t a query using a parallel table scan?
|
||||||
|
|
||||||
The planner doesn’t consider [out-of-line storage](https://www.postgresql.org/docs/current/storage-toast.html) in cost estimates, which can make a serial scan look cheaper. You can reduce the cost of a parallel scan for a query with:
|
The planner doesn’t consider [out-of-line storage](https://www.postgresql.org/docs/current/storage-toast.html) in cost estimates, which can make a serial scan look cheaper. You can reduce the cost of a parallel scan for a query with:
|
||||||
@@ -490,10 +588,10 @@ If compilation fails with `fatal error: postgres.h: No such file or directory`,
|
|||||||
For Ubuntu and Debian, use:
|
For Ubuntu and Debian, use:
|
||||||
|
|
||||||
```sh
|
```sh
|
||||||
sudo apt install postgresql-server-dev-15
|
sudo apt install postgresql-server-dev-16
|
||||||
```
|
```
|
||||||
|
|
||||||
Note: Replace `15` with your Postgres server version
|
Note: Replace `16` with your Postgres server version
|
||||||
|
|
||||||
### Windows
|
### Windows
|
||||||
|
|
||||||
@@ -508,7 +606,7 @@ Note: The exact path will vary depending on your Visual Studio version and editi
|
|||||||
Then use `nmake` to build:
|
Then use `nmake` to build:
|
||||||
|
|
||||||
```cmd
|
```cmd
|
||||||
set "PGROOT=C:\Program Files\PostgreSQL\15"
|
set "PGROOT=C:\Program Files\PostgreSQL\16"
|
||||||
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
|
git clone --branch v0.5.1 https://github.com/pgvector/pgvector.git
|
||||||
cd pgvector
|
cd pgvector
|
||||||
nmake /F Makefile.win
|
nmake /F Makefile.win
|
||||||
@@ -558,22 +656,22 @@ pgxn install vector
|
|||||||
Debian and Ubuntu packages are available from the [PostgreSQL APT Repository](https://wiki.postgresql.org/wiki/Apt). Follow the [setup instructions](https://wiki.postgresql.org/wiki/Apt#Quickstart) and run:
|
Debian and Ubuntu packages are available from the [PostgreSQL APT Repository](https://wiki.postgresql.org/wiki/Apt). Follow the [setup instructions](https://wiki.postgresql.org/wiki/Apt#Quickstart) and run:
|
||||||
|
|
||||||
```sh
|
```sh
|
||||||
sudo apt install postgresql-15-pgvector
|
sudo apt install postgresql-16-pgvector
|
||||||
```
|
```
|
||||||
|
|
||||||
Note: Replace `15` with your Postgres server version
|
Note: Replace `16` with your Postgres server version
|
||||||
|
|
||||||
### Yum
|
### Yum
|
||||||
|
|
||||||
RPM packages are available from the [PostgreSQL Yum Repository](https://yum.postgresql.org/). Follow the [setup instructions](https://www.postgresql.org/download/linux/redhat/) for your distribution and run:
|
RPM packages are available from the [PostgreSQL Yum Repository](https://yum.postgresql.org/). Follow the [setup instructions](https://www.postgresql.org/download/linux/redhat/) for your distribution and run:
|
||||||
|
|
||||||
```sh
|
```sh
|
||||||
sudo yum install pgvector_15
|
sudo yum install pgvector_16
|
||||||
# or
|
# or
|
||||||
sudo dnf install pgvector_15
|
sudo dnf install pgvector_16
|
||||||
```
|
```
|
||||||
|
|
||||||
Note: Replace `15` with your Postgres server version
|
Note: Replace `16` with your Postgres server version
|
||||||
|
|
||||||
### conda-forge
|
### conda-forge
|
||||||
|
|
||||||
@@ -595,7 +693,7 @@ pgvector is available on [these providers](https://github.com/pgvector/pgvector/
|
|||||||
|
|
||||||
## Upgrading
|
## Upgrading
|
||||||
|
|
||||||
Install the latest version. Then in each database you want to upgrade, run:
|
[Install](#installation) the latest version (use the same method as the original installation). Then in each database you want to upgrade, run:
|
||||||
|
|
||||||
```sql
|
```sql
|
||||||
ALTER EXTENSION vector UPDATE;
|
ALTER EXTENSION vector UPDATE;
|
||||||
|
|||||||
31
src/hnsw.c
31
src/hnsw.c
@@ -14,14 +14,45 @@
|
|||||||
#endif
|
#endif
|
||||||
|
|
||||||
int hnsw_ef_search;
|
int hnsw_ef_search;
|
||||||
|
int hnsw_lock_tranche_id;
|
||||||
static relopt_kind hnsw_relopt_kind;
|
static relopt_kind hnsw_relopt_kind;
|
||||||
|
|
||||||
|
/*
|
||||||
|
* Assign a tranche ID for our LWLocks. This only needs to be done by one
|
||||||
|
* backend, as the tranche ID is remembered in shared memory.
|
||||||
|
*
|
||||||
|
* This shared memory area is very small, so we just allocate it from the
|
||||||
|
* "slop" that PostgreSQL reserves for small allocations like this. If
|
||||||
|
* this grows bigger, we should use a shmem_request_hook and
|
||||||
|
* RequestAddinShmemSpace() to pre-reserve space for this.
|
||||||
|
*/
|
||||||
|
static void
|
||||||
|
HnswInitLockTranche(void)
|
||||||
|
{
|
||||||
|
int *tranche_ids;
|
||||||
|
bool found;
|
||||||
|
|
||||||
|
LWLockAcquire(AddinShmemInitLock, LW_EXCLUSIVE);
|
||||||
|
tranche_ids = ShmemInitStruct("hnsw LWLock ids",
|
||||||
|
sizeof(int) * 1,
|
||||||
|
&found);
|
||||||
|
if (!found)
|
||||||
|
tranche_ids[0] = LWLockNewTrancheId();
|
||||||
|
hnsw_lock_tranche_id = tranche_ids[0];
|
||||||
|
LWLockRelease(AddinShmemInitLock);
|
||||||
|
|
||||||
|
/* Per-backend registration of the tranche ID */
|
||||||
|
LWLockRegisterTranche(hnsw_lock_tranche_id, "HnswBuild");
|
||||||
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Initialize index options and variables
|
* Initialize index options and variables
|
||||||
*/
|
*/
|
||||||
void
|
void
|
||||||
HnswInit(void)
|
HnswInit(void)
|
||||||
{
|
{
|
||||||
|
HnswInitLockTranche();
|
||||||
|
|
||||||
hnsw_relopt_kind = add_reloption_kind();
|
hnsw_relopt_kind = add_reloption_kind();
|
||||||
add_int_reloption(hnsw_relopt_kind, "m", "Max number of connections",
|
add_int_reloption(hnsw_relopt_kind, "m", "Max number of connections",
|
||||||
HNSW_DEFAULT_M, HNSW_MIN_M, HNSW_MAX_M
|
HNSW_DEFAULT_M, HNSW_MIN_M, HNSW_MAX_M
|
||||||
|
|||||||
224
src/hnsw.h
224
src/hnsw.h
@@ -4,9 +4,11 @@
|
|||||||
#include "postgres.h"
|
#include "postgres.h"
|
||||||
|
|
||||||
#include "access/generic_xlog.h"
|
#include "access/generic_xlog.h"
|
||||||
|
#include "access/parallel.h"
|
||||||
#include "access/reloptions.h"
|
#include "access/reloptions.h"
|
||||||
#include "nodes/execnodes.h"
|
#include "nodes/execnodes.h"
|
||||||
#include "port.h" /* for random() */
|
#include "port.h" /* for random() */
|
||||||
|
#include "utils/relptr.h"
|
||||||
#include "utils/sampling.h"
|
#include "utils/sampling.h"
|
||||||
#include "vector.h"
|
#include "vector.h"
|
||||||
|
|
||||||
@@ -14,6 +16,10 @@
|
|||||||
#error "Requires PostgreSQL 11+"
|
#error "Requires PostgreSQL 11+"
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
|
#if PG_VERSION_NUM < 120000
|
||||||
|
#include "access/relscan.h"
|
||||||
|
#endif
|
||||||
|
|
||||||
#define HNSW_MAX_DIM 2000
|
#define HNSW_MAX_DIM 2000
|
||||||
|
|
||||||
/* Support functions */
|
/* Support functions */
|
||||||
@@ -59,7 +65,7 @@
|
|||||||
|
|
||||||
#define HNSW_MAX_SIZE (BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - sizeof(ItemIdData))
|
#define HNSW_MAX_SIZE (BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - sizeof(ItemIdData))
|
||||||
|
|
||||||
#define HNSW_ELEMENT_TUPLE_SIZE(_dim) MAXALIGN(offsetof(HnswElementTupleData, vec) + VECTOR_SIZE(_dim))
|
#define HNSW_ELEMENT_TUPLE_SIZE(size) MAXALIGN(offsetof(HnswElementTupleData, data) + (size))
|
||||||
#define HNSW_NEIGHBOR_TUPLE_SIZE(level, m) MAXALIGN(offsetof(HnswNeighborTupleData, indextids) + ((level) + 2) * (m) * sizeof(ItemPointerData))
|
#define HNSW_NEIGHBOR_TUPLE_SIZE(level, m) MAXALIGN(offsetof(HnswNeighborTupleData, indextids) + ((level) + 2) * (m) * sizeof(ItemPointerData))
|
||||||
|
|
||||||
#define HnswPageGetOpaque(page) ((HnswPageOpaque) PageGetSpecialPointer(page))
|
#define HnswPageGetOpaque(page) ((HnswPageOpaque) PageGetSpecialPointer(page))
|
||||||
@@ -67,8 +73,10 @@
|
|||||||
|
|
||||||
#if PG_VERSION_NUM >= 150000
|
#if PG_VERSION_NUM >= 150000
|
||||||
#define RandomDouble() pg_prng_double(&pg_global_prng_state)
|
#define RandomDouble() pg_prng_double(&pg_global_prng_state)
|
||||||
|
#define SeedRandom(seed) pg_prng_seed(&pg_global_prng_state, seed)
|
||||||
#else
|
#else
|
||||||
#define RandomDouble() (((double) random()) / MAX_RANDOM_VALUE)
|
#define RandomDouble() (((double) random()) / MAX_RANDOM_VALUE)
|
||||||
|
#define SeedRandom(seed) srandom(seed)
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
#if PG_VERSION_NUM < 130000
|
#if PG_VERSION_NUM < 130000
|
||||||
@@ -86,31 +94,66 @@
|
|||||||
#define HnswGetMl(m) (1 / log(m))
|
#define HnswGetMl(m) (1 / log(m))
|
||||||
|
|
||||||
/* Ensure fits on page and in uint8 */
|
/* Ensure fits on page and in uint8 */
|
||||||
#define HnswGetMaxLevel(m) Min(((BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - offsetof(HnswNeighborTupleData, indextids) - sizeof(ItemIdData)) / (sizeof(ItemPointerData)) / m) - 2, 255)
|
#define HnswGetMaxLevel(m) Min(((BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - offsetof(HnswNeighborTupleData, indextids) - sizeof(ItemIdData)) / (sizeof(ItemPointerData)) / (m)) - 2, 255)
|
||||||
|
|
||||||
|
#define HnswGetValue(base, element) PointerGetDatum(HnswPtrAccess(base, (element)->value))
|
||||||
|
|
||||||
|
#if PG_VERSION_NUM < 140005
|
||||||
|
#define relptr_offset(rp) ((rp).relptr_off - 1)
|
||||||
|
#endif
|
||||||
|
|
||||||
|
/* Pointer macros */
|
||||||
|
#define HnswPtrAccess(base, hp) ((base) == NULL ? (hp).ptr : relptr_access(base, (hp).relptr))
|
||||||
|
#define HnswPtrStore(base, hp, value) ((base) == NULL ? (void) ((hp).ptr = (value)) : (void) relptr_store(base, (hp).relptr, value))
|
||||||
|
#define HnswPtrIsNull(base, hp) ((base) == NULL ? (hp).ptr == NULL : relptr_is_null((hp).relptr))
|
||||||
|
#define HnswPtrEqual(base, hp1, hp2) ((base) == NULL ? (hp1).ptr == (hp2).ptr : relptr_offset((hp1).relptr) == relptr_offset((hp2).relptr))
|
||||||
|
|
||||||
|
/* For code paths dedicated to each type */
|
||||||
|
#define HnswPtrPointer(hp) (hp).ptr
|
||||||
|
#define HnswPtrOffset(hp) relptr_offset((hp).relptr)
|
||||||
|
|
||||||
/* Variables */
|
/* Variables */
|
||||||
extern int hnsw_ef_search;
|
extern int hnsw_ef_search;
|
||||||
|
|
||||||
|
/* This is initialized when the module is loaded */
|
||||||
|
extern int hnsw_lock_tranche_id;
|
||||||
|
|
||||||
|
typedef struct HnswElementData HnswElementData;
|
||||||
typedef struct HnswNeighborArray HnswNeighborArray;
|
typedef struct HnswNeighborArray HnswNeighborArray;
|
||||||
|
|
||||||
|
#define HnswPtrDeclare(type, relptrtype, ptrtype) \
|
||||||
|
relptr_declare(type, relptrtype); \
|
||||||
|
typedef union { type *ptr; relptrtype relptr; } ptrtype;
|
||||||
|
|
||||||
|
/* Pointers that can be absolute or relative */
|
||||||
|
/* Use char for DatumPtr so works with Pointer */
|
||||||
|
HnswPtrDeclare(HnswElementData, HnswElementRelptr, HnswElementPtr);
|
||||||
|
HnswPtrDeclare(HnswNeighborArray, HnswNeighborArrayRelptr, HnswNeighborArrayPtr);
|
||||||
|
HnswPtrDeclare(HnswNeighborArrayPtr, HnswNeighborsRelptr, HnswNeighborsPtr);
|
||||||
|
HnswPtrDeclare(char, DatumRelptr, DatumPtr);
|
||||||
|
|
||||||
typedef struct HnswElementData
|
typedef struct HnswElementData
|
||||||
{
|
{
|
||||||
List *heaptids;
|
HnswElementPtr next;
|
||||||
|
ItemPointerData heaptids[HNSW_HEAPTIDS];
|
||||||
|
uint8 heaptidsLength;
|
||||||
uint8 level;
|
uint8 level;
|
||||||
uint8 deleted;
|
uint8 deleted;
|
||||||
HnswNeighborArray *neighbors;
|
uint32 hash;
|
||||||
|
HnswNeighborsPtr neighbors;
|
||||||
BlockNumber blkno;
|
BlockNumber blkno;
|
||||||
OffsetNumber offno;
|
OffsetNumber offno;
|
||||||
OffsetNumber neighborOffno;
|
OffsetNumber neighborOffno;
|
||||||
BlockNumber neighborPage;
|
BlockNumber neighborPage;
|
||||||
Vector *vec;
|
DatumPtr value;
|
||||||
|
LWLock lock;
|
||||||
} HnswElementData;
|
} HnswElementData;
|
||||||
|
|
||||||
typedef HnswElementData * HnswElement;
|
typedef HnswElementData * HnswElement;
|
||||||
|
|
||||||
typedef struct HnswCandidate
|
typedef struct HnswCandidate
|
||||||
{
|
{
|
||||||
HnswElement element;
|
HnswElementPtr element;
|
||||||
float distance;
|
float distance;
|
||||||
bool closer;
|
bool closer;
|
||||||
} HnswCandidate;
|
} HnswCandidate;
|
||||||
@@ -119,7 +162,7 @@ typedef struct HnswNeighborArray
|
|||||||
{
|
{
|
||||||
int length;
|
int length;
|
||||||
bool closerSet;
|
bool closerSet;
|
||||||
HnswCandidate *items;
|
HnswCandidate items[FLEXIBLE_ARRAY_MEMBER];
|
||||||
} HnswNeighborArray;
|
} HnswNeighborArray;
|
||||||
|
|
||||||
typedef struct HnswPairingHeapNode
|
typedef struct HnswPairingHeapNode
|
||||||
@@ -136,6 +179,78 @@ typedef struct HnswOptions
|
|||||||
int efConstruction; /* size of dynamic candidate list */
|
int efConstruction; /* size of dynamic candidate list */
|
||||||
} HnswOptions;
|
} HnswOptions;
|
||||||
|
|
||||||
|
typedef struct HnswGraph
|
||||||
|
{
|
||||||
|
/* Graph state */
|
||||||
|
slock_t lock;
|
||||||
|
HnswElementPtr head;
|
||||||
|
double indtuples;
|
||||||
|
|
||||||
|
/* Entry state */
|
||||||
|
LWLock entryLock;
|
||||||
|
HnswElementPtr entryPoint;
|
||||||
|
|
||||||
|
/* Allocations state */
|
||||||
|
LWLock allocatorLock;
|
||||||
|
long memoryUsed;
|
||||||
|
long memoryTotal;
|
||||||
|
|
||||||
|
/* Flushed state */
|
||||||
|
LWLock flushLock;
|
||||||
|
bool flushed;
|
||||||
|
} HnswGraph;
|
||||||
|
|
||||||
|
typedef struct HnswSpool
|
||||||
|
{
|
||||||
|
Relation heap;
|
||||||
|
Relation index;
|
||||||
|
} HnswSpool;
|
||||||
|
|
||||||
|
typedef struct HnswShared
|
||||||
|
{
|
||||||
|
/* Immutable state */
|
||||||
|
Oid heaprelid;
|
||||||
|
Oid indexrelid;
|
||||||
|
bool isconcurrent;
|
||||||
|
int scantuplesortstates;
|
||||||
|
dsa_pointer dsaptr;
|
||||||
|
|
||||||
|
/* Worker progress */
|
||||||
|
ConditionVariable workersdonecv;
|
||||||
|
|
||||||
|
/* Mutex for mutable state */
|
||||||
|
slock_t mutex;
|
||||||
|
|
||||||
|
/* Mutable state */
|
||||||
|
int nparticipantsdone;
|
||||||
|
double reltuples;
|
||||||
|
HnswGraph graphData;
|
||||||
|
|
||||||
|
#if PG_VERSION_NUM < 120000
|
||||||
|
ParallelHeapScanDescData heapdesc; /* must come last */
|
||||||
|
#endif
|
||||||
|
} HnswShared;
|
||||||
|
|
||||||
|
#if PG_VERSION_NUM >= 120000
|
||||||
|
#define ParallelTableScanFromHnswShared(shared) \
|
||||||
|
(ParallelTableScanDesc) ((char *) (shared) + BUFFERALIGN(sizeof(HnswShared)))
|
||||||
|
#endif
|
||||||
|
|
||||||
|
typedef struct HnswLeader
|
||||||
|
{
|
||||||
|
ParallelContext *pcxt;
|
||||||
|
int nparticipanttuplesorts;
|
||||||
|
HnswShared *hnswshared;
|
||||||
|
Snapshot snapshot;
|
||||||
|
char *hnswarea;
|
||||||
|
} HnswLeader;
|
||||||
|
|
||||||
|
typedef struct HnswAllocator
|
||||||
|
{
|
||||||
|
void *(*alloc) (Size size, void *state);
|
||||||
|
void *state;
|
||||||
|
} HnswAllocator;
|
||||||
|
|
||||||
typedef struct HnswBuildState
|
typedef struct HnswBuildState
|
||||||
{
|
{
|
||||||
/* Info */
|
/* Info */
|
||||||
@@ -159,16 +274,21 @@ typedef struct HnswBuildState
|
|||||||
Oid collation;
|
Oid collation;
|
||||||
|
|
||||||
/* Variables */
|
/* Variables */
|
||||||
List *elements;
|
HnswGraph graphData;
|
||||||
HnswElement entryPoint;
|
HnswGraph *graph;
|
||||||
double ml;
|
double ml;
|
||||||
int maxLevel;
|
int maxLevel;
|
||||||
double maxInMemoryElements;
|
|
||||||
bool flushed;
|
|
||||||
Vector *normvec;
|
Vector *normvec;
|
||||||
|
|
||||||
/* Memory */
|
/* Memory */
|
||||||
|
MemoryContext graphCtx;
|
||||||
MemoryContext tmpCtx;
|
MemoryContext tmpCtx;
|
||||||
|
HnswAllocator allocator;
|
||||||
|
|
||||||
|
/* Parallel builds */
|
||||||
|
HnswLeader *hnswleader;
|
||||||
|
HnswShared *hnswshared;
|
||||||
|
char *hnswarea;
|
||||||
} HnswBuildState;
|
} HnswBuildState;
|
||||||
|
|
||||||
typedef struct HnswMetaPageData
|
typedef struct HnswMetaPageData
|
||||||
@@ -204,7 +324,7 @@ typedef struct HnswElementTupleData
|
|||||||
ItemPointerData heaptids[HNSW_HEAPTIDS];
|
ItemPointerData heaptids[HNSW_HEAPTIDS];
|
||||||
ItemPointerData neighbortid;
|
ItemPointerData neighbortid;
|
||||||
uint16 unused2;
|
uint16 unused2;
|
||||||
Vector vec;
|
Vector data;
|
||||||
} HnswElementTupleData;
|
} HnswElementTupleData;
|
||||||
|
|
||||||
typedef HnswElementTupleData * HnswElementTuple;
|
typedef HnswElementTupleData * HnswElementTuple;
|
||||||
@@ -250,7 +370,7 @@ typedef struct HnswVacuumState
|
|||||||
Oid collation;
|
Oid collation;
|
||||||
|
|
||||||
/* Variables */
|
/* Variables */
|
||||||
HTAB *deleted;
|
struct tidhash_hash *deleted;
|
||||||
BufferAccessStrategy bas;
|
BufferAccessStrategy bas;
|
||||||
HnswNeighborTuple ntup;
|
HnswNeighborTuple ntup;
|
||||||
HnswElementData highestPoint;
|
HnswElementData highestPoint;
|
||||||
@@ -264,31 +384,29 @@ int HnswGetM(Relation index);
|
|||||||
int HnswGetEfConstruction(Relation index);
|
int HnswGetEfConstruction(Relation index);
|
||||||
FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum);
|
FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum);
|
||||||
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
||||||
void HnswCommitBuffer(Buffer buf, GenericXLogState *state);
|
|
||||||
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
|
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
|
||||||
void HnswInitPage(Buffer buf, Page page);
|
void HnswInitPage(Buffer buf, Page page);
|
||||||
void HnswInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogState **state);
|
|
||||||
void HnswInit(void);
|
void HnswInit(void);
|
||||||
List *HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
|
List *HnswSearchLayer(char *base, Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
|
||||||
HnswElement HnswGetEntryPoint(Relation index);
|
HnswElement HnswGetEntryPoint(Relation index);
|
||||||
void HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint);
|
void HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint);
|
||||||
HnswElement HnswInitElement(ItemPointer tid, int m, double ml, int maxLevel);
|
void *HnswAlloc(HnswAllocator * allocator, Size size);
|
||||||
void HnswFreeElement(HnswElement element);
|
HnswElement HnswInitElement(char *base, ItemPointer tid, int m, double ml, int maxLevel, HnswAllocator * alloc);
|
||||||
HnswElement HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno);
|
HnswElement HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno);
|
||||||
void HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, FmgrInfo *procinfo, Oid collation, int m, int efConstruction, bool existing);
|
void HnswInsertElement(char *base, HnswElement element, HnswElement entryPoint, Relation index, FmgrInfo *procinfo, Oid collation, int m, int efConstruction, bool existing);
|
||||||
HnswElement HnswFindDuplicate(HnswElement e);
|
HnswCandidate *HnswEntryCandidate(char *base, HnswElement em, Datum q, Relation rel, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
||||||
HnswCandidate *HnswEntryCandidate(HnswElement em, Datum q, Relation rel, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
void HnswUpdateMetaPage(Relation index, int updateEntry, HnswElement entryPoint, BlockNumber insertPage, ForkNumber forkNum, bool building);
|
||||||
void HnswUpdateMetaPage(Relation index, int updateEntry, HnswElement entryPoint, BlockNumber insertPage, ForkNumber forkNum);
|
void HnswSetNeighborTuple(char *base, HnswNeighborTuple ntup, HnswElement e, int m);
|
||||||
void HnswSetNeighborTuple(HnswNeighborTuple ntup, HnswElement e, int m);
|
|
||||||
void HnswAddHeapTid(HnswElement element, ItemPointer heaptid);
|
void HnswAddHeapTid(HnswElement element, ItemPointer heaptid);
|
||||||
void HnswInitNeighbors(HnswElement element, int m);
|
void HnswInitNeighbors(char *base, HnswElement element, int m, HnswAllocator * alloc);
|
||||||
bool HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel);
|
bool HnswInsertTupleOnDisk(Relation index, Datum value, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel, bool building);
|
||||||
void HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting);
|
void HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting, bool building);
|
||||||
void HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec);
|
void HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec);
|
||||||
void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
||||||
void HnswSetElementTuple(HnswElementTuple etup, HnswElement element);
|
void HnswSetElementTuple(char *base, HnswElementTuple etup, HnswElement element);
|
||||||
void HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
|
void HnswUpdateConnection(char *base, HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
|
||||||
void HnswLoadNeighbors(HnswElement element, Relation index, int m);
|
void HnswLoadNeighbors(HnswElement element, Relation index, int m);
|
||||||
|
PGDLLEXPORT void HnswParallelBuildMain(dsm_segment *seg, shm_toc *toc);
|
||||||
|
|
||||||
/* Index access methods */
|
/* Index access methods */
|
||||||
IndexBuildResult *hnswbuild(Relation heap, Relation index, IndexInfo *indexInfo);
|
IndexBuildResult *hnswbuild(Relation heap, Relation index, IndexInfo *indexInfo);
|
||||||
@@ -306,4 +424,54 @@ void hnswrescan(IndexScanDesc scan, ScanKey keys, int nkeys, ScanKey orderbys,
|
|||||||
bool hnswgettuple(IndexScanDesc scan, ScanDirection dir);
|
bool hnswgettuple(IndexScanDesc scan, ScanDirection dir);
|
||||||
void hnswendscan(IndexScanDesc scan);
|
void hnswendscan(IndexScanDesc scan);
|
||||||
|
|
||||||
|
static inline HnswNeighborArray *
|
||||||
|
HnswGetNeighbors(char *base, HnswElement element, int lc)
|
||||||
|
{
|
||||||
|
HnswNeighborArrayPtr *neighborList = HnswPtrAccess(base, element->neighbors);
|
||||||
|
|
||||||
|
Assert(element->level >= lc);
|
||||||
|
|
||||||
|
return HnswPtrAccess(base, neighborList[lc]);
|
||||||
|
}
|
||||||
|
|
||||||
|
/* Hash tables */
|
||||||
|
typedef struct TidHashEntry
|
||||||
|
{
|
||||||
|
ItemPointerData tid;
|
||||||
|
char status;
|
||||||
|
} TidHashEntry;
|
||||||
|
|
||||||
|
#define SH_PREFIX tidhash
|
||||||
|
#define SH_ELEMENT_TYPE TidHashEntry
|
||||||
|
#define SH_KEY_TYPE ItemPointerData
|
||||||
|
#define SH_SCOPE extern
|
||||||
|
#define SH_DECLARE
|
||||||
|
#include "lib/simplehash.h"
|
||||||
|
|
||||||
|
typedef struct PointerHashEntry
|
||||||
|
{
|
||||||
|
uintptr_t ptr;
|
||||||
|
char status;
|
||||||
|
} PointerHashEntry;
|
||||||
|
|
||||||
|
#define SH_PREFIX pointerhash
|
||||||
|
#define SH_ELEMENT_TYPE PointerHashEntry
|
||||||
|
#define SH_KEY_TYPE uintptr_t
|
||||||
|
#define SH_SCOPE extern
|
||||||
|
#define SH_DECLARE
|
||||||
|
#include "lib/simplehash.h"
|
||||||
|
|
||||||
|
typedef struct OffsetHashEntry
|
||||||
|
{
|
||||||
|
Size offset;
|
||||||
|
char status;
|
||||||
|
} OffsetHashEntry;
|
||||||
|
|
||||||
|
#define SH_PREFIX offsethash
|
||||||
|
#define SH_ELEMENT_TYPE OffsetHashEntry
|
||||||
|
#define SH_KEY_TYPE Size
|
||||||
|
#define SH_SCOPE extern
|
||||||
|
#define SH_DECLARE
|
||||||
|
#include "lib/simplehash.h"
|
||||||
|
|
||||||
#endif
|
#endif
|
||||||
|
|||||||
913
src/hnswbuild.c
913
src/hnswbuild.c
File diff suppressed because it is too large
Load Diff
208
src/hnswinsert.c
208
src/hnswinsert.c
@@ -5,6 +5,7 @@
|
|||||||
#include "hnsw.h"
|
#include "hnsw.h"
|
||||||
#include "storage/bufmgr.h"
|
#include "storage/bufmgr.h"
|
||||||
#include "storage/lmgr.h"
|
#include "storage/lmgr.h"
|
||||||
|
#include "utils/datum.h"
|
||||||
#include "utils/memutils.h"
|
#include "utils/memutils.h"
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -92,7 +93,7 @@ HnswFreeOffset(Relation index, Buffer buf, Page page, HnswElement element, Size
|
|||||||
* Add a new page
|
* Add a new page
|
||||||
*/
|
*/
|
||||||
static void
|
static void
|
||||||
HnswInsertAppendPage(Relation index, Buffer *nbuf, Page *npage, GenericXLogState *state, Page page)
|
HnswInsertAppendPage(Relation index, Buffer *nbuf, Page *npage, GenericXLogState *state, Page page, bool building)
|
||||||
{
|
{
|
||||||
/* Add a new page */
|
/* Add a new page */
|
||||||
LockRelationForExtension(index, ExclusiveLock);
|
LockRelationForExtension(index, ExclusiveLock);
|
||||||
@@ -100,7 +101,11 @@ HnswInsertAppendPage(Relation index, Buffer *nbuf, Page *npage, GenericXLogState
|
|||||||
UnlockRelationForExtension(index, ExclusiveLock);
|
UnlockRelationForExtension(index, ExclusiveLock);
|
||||||
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|
||||||
/* Init new page */
|
/* Init new page */
|
||||||
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if (building)
|
||||||
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*npage = BufferGetPage(*nbuf);
|
||||||
|
else
|
||||||
*npage = GenericXLogRegisterBuffer(state, *nbuf, GENERIC_XLOG_FULL_IMAGE);
|
*npage = GenericXLogRegisterBuffer(state, *nbuf, GENERIC_XLOG_FULL_IMAGE);
|
||||||
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|
||||||
HnswInitPage(*nbuf, *npage);
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HnswInitPage(*nbuf, *npage);
|
||||||
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|
||||||
/* Update previous buffer */
|
/* Update previous buffer */
|
||||||
@@ -111,7 +116,7 @@ HnswInsertAppendPage(Relation index, Buffer *nbuf, Page *npage, GenericXLogState
|
|||||||
* Add to element and neighbor pages
|
* Add to element and neighbor pages
|
||||||
*/
|
*/
|
||||||
static void
|
static void
|
||||||
WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPage, BlockNumber *updatedInsertPage)
|
WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPage, BlockNumber *updatedInsertPage, bool building)
|
||||||
{
|
{
|
||||||
Buffer buf;
|
Buffer buf;
|
||||||
Page page;
|
Page page;
|
||||||
@@ -123,16 +128,16 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
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|||||||
Size minCombinedSize;
|
Size minCombinedSize;
|
||||||
HnswElementTuple etup;
|
HnswElementTuple etup;
|
||||||
BlockNumber currentPage = insertPage;
|
BlockNumber currentPage = insertPage;
|
||||||
int dimensions = e->vec->dim;
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|
||||||
HnswNeighborTuple ntup;
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HnswNeighborTuple ntup;
|
||||||
Buffer nbuf;
|
Buffer nbuf;
|
||||||
Page npage;
|
Page npage;
|
||||||
OffsetNumber freeOffno = InvalidOffsetNumber;
|
OffsetNumber freeOffno = InvalidOffsetNumber;
|
||||||
OffsetNumber freeNeighborOffno = InvalidOffsetNumber;
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OffsetNumber freeNeighborOffno = InvalidOffsetNumber;
|
||||||
BlockNumber newInsertPage = InvalidBlockNumber;
|
BlockNumber newInsertPage = InvalidBlockNumber;
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||||||
|
char *base = NULL;
|
||||||
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|
||||||
/* Calculate sizes */
|
/* Calculate sizes */
|
||||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions);
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etupSize = HNSW_ELEMENT_TUPLE_SIZE(VARSIZE_ANY(HnswPtrAccess(base, e->value)));
|
||||||
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m);
|
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m);
|
||||||
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
|
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
|
||||||
maxSize = HNSW_MAX_SIZE;
|
maxSize = HNSW_MAX_SIZE;
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||||||
@@ -140,11 +145,11 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
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|||||||
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|
||||||
/* Prepare element tuple */
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/* Prepare element tuple */
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||||||
etup = palloc0(etupSize);
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etup = palloc0(etupSize);
|
||||||
HnswSetElementTuple(etup, e);
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HnswSetElementTuple(base, etup, e);
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||||||
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|
||||||
/* Prepare neighbor tuple */
|
/* Prepare neighbor tuple */
|
||||||
ntup = palloc0(ntupSize);
|
ntup = palloc0(ntupSize);
|
||||||
HnswSetNeighborTuple(ntup, e, m);
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HnswSetNeighborTuple(base, ntup, e, m);
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||||||
|
|
||||||
/* Find a page (or two if needed) to insert the tuples */
|
/* Find a page (or two if needed) to insert the tuples */
|
||||||
for (;;)
|
for (;;)
|
||||||
@@ -152,8 +157,16 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
|||||||
buf = ReadBuffer(index, currentPage);
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buf = ReadBuffer(index, currentPage);
|
||||||
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
||||||
|
|
||||||
|
if (building)
|
||||||
|
{
|
||||||
|
state = NULL;
|
||||||
|
page = BufferGetPage(buf);
|
||||||
|
}
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||||||
|
else
|
||||||
|
{
|
||||||
state = GenericXLogStart(index);
|
state = GenericXLogStart(index);
|
||||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||||
|
}
|
||||||
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|
||||||
/* Keep track of first page where element at level 0 can fit */
|
/* Keep track of first page where element at level 0 can fit */
|
||||||
if (!BlockNumberIsValid(newInsertPage) && PageGetFreeSpace(page) >= minCombinedSize)
|
if (!BlockNumberIsValid(newInsertPage) && PageGetFreeSpace(page) >= minCombinedSize)
|
||||||
@@ -173,7 +186,12 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
|||||||
if (HnswFreeOffset(index, buf, page, e, ntupSize, &nbuf, &npage, &freeOffno, &freeNeighborOffno, &newInsertPage))
|
if (HnswFreeOffset(index, buf, page, e, ntupSize, &nbuf, &npage, &freeOffno, &freeNeighborOffno, &newInsertPage))
|
||||||
{
|
{
|
||||||
if (nbuf != buf)
|
if (nbuf != buf)
|
||||||
|
{
|
||||||
|
if (building)
|
||||||
|
npage = BufferGetPage(nbuf);
|
||||||
|
else
|
||||||
npage = GenericXLogRegisterBuffer(state, nbuf, 0);
|
npage = GenericXLogRegisterBuffer(state, nbuf, 0);
|
||||||
|
}
|
||||||
|
|
||||||
break;
|
break;
|
||||||
}
|
}
|
||||||
@@ -182,7 +200,7 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
|||||||
/* Skip if both tuples can fit on the same page */
|
/* Skip if both tuples can fit on the same page */
|
||||||
if (combinedSize > maxSize && PageGetFreeSpace(page) >= etupSize && !BlockNumberIsValid(HnswPageGetOpaque(page)->nextblkno))
|
if (combinedSize > maxSize && PageGetFreeSpace(page) >= etupSize && !BlockNumberIsValid(HnswPageGetOpaque(page)->nextblkno))
|
||||||
{
|
{
|
||||||
HnswInsertAppendPage(index, &nbuf, &npage, state, page);
|
HnswInsertAppendPage(index, &nbuf, &npage, state, page, building);
|
||||||
break;
|
break;
|
||||||
}
|
}
|
||||||
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|
||||||
@@ -191,6 +209,7 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
|||||||
if (BlockNumberIsValid(currentPage))
|
if (BlockNumberIsValid(currentPage))
|
||||||
{
|
{
|
||||||
/* Move to next page */
|
/* Move to next page */
|
||||||
|
if (!building)
|
||||||
GenericXLogAbort(state);
|
GenericXLogAbort(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
}
|
}
|
||||||
@@ -199,22 +218,33 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
|||||||
Buffer newbuf;
|
Buffer newbuf;
|
||||||
Page newpage;
|
Page newpage;
|
||||||
|
|
||||||
HnswInsertAppendPage(index, &newbuf, &newpage, state, page);
|
HnswInsertAppendPage(index, &newbuf, &newpage, state, page, building);
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
if (building)
|
||||||
|
MarkBufferDirty(buf);
|
||||||
|
else
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
|
|
||||||
/* Unlock previous buffer */
|
/* Unlock previous buffer */
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
|
|
||||||
/* Prepare new buffer */
|
/* Prepare new buffer */
|
||||||
state = GenericXLogStart(index);
|
|
||||||
buf = newbuf;
|
buf = newbuf;
|
||||||
|
if (building)
|
||||||
|
{
|
||||||
|
state = NULL;
|
||||||
|
page = BufferGetPage(buf);
|
||||||
|
}
|
||||||
|
else
|
||||||
|
{
|
||||||
|
state = GenericXLogStart(index);
|
||||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||||
|
}
|
||||||
|
|
||||||
/* Create new page for neighbors if needed */
|
/* Create new page for neighbors if needed */
|
||||||
if (PageGetFreeSpace(page) < combinedSize)
|
if (PageGetFreeSpace(page) < combinedSize)
|
||||||
HnswInsertAppendPage(index, &nbuf, &npage, state, page);
|
HnswInsertAppendPage(index, &nbuf, &npage, state, page, building);
|
||||||
else
|
else
|
||||||
{
|
{
|
||||||
nbuf = buf;
|
nbuf = buf;
|
||||||
@@ -268,6 +298,13 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
|||||||
}
|
}
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
if (building)
|
||||||
|
{
|
||||||
|
MarkBufferDirty(buf);
|
||||||
|
if (nbuf != buf)
|
||||||
|
MarkBufferDirty(nbuf);
|
||||||
|
}
|
||||||
|
else
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
if (nbuf != buf)
|
if (nbuf != buf)
|
||||||
@@ -302,12 +339,14 @@ ConnectionExists(HnswElement e, HnswNeighborTuple ntup, int startIdx, int lm)
|
|||||||
* Update neighbors
|
* Update neighbors
|
||||||
*/
|
*/
|
||||||
void
|
void
|
||||||
HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting)
|
HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting, bool building)
|
||||||
{
|
{
|
||||||
|
char *base = NULL;
|
||||||
|
|
||||||
for (int lc = e->level; lc >= 0; lc--)
|
for (int lc = e->level; lc >= 0; lc--)
|
||||||
{
|
{
|
||||||
int lm = HnswGetLayerM(m, lc);
|
int lm = HnswGetLayerM(m, lc);
|
||||||
HnswNeighborArray *neighbors = &e->neighbors[lc];
|
HnswNeighborArray *neighbors = HnswGetNeighbors(base, e, lc);
|
||||||
|
|
||||||
for (int i = 0; i < neighbors->length; i++)
|
for (int i = 0; i < neighbors->length; i++)
|
||||||
{
|
{
|
||||||
@@ -320,11 +359,12 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
|||||||
Size ntupSize;
|
Size ntupSize;
|
||||||
int idx = -1;
|
int idx = -1;
|
||||||
int startIdx;
|
int startIdx;
|
||||||
OffsetNumber offno = hc->element->neighborOffno;
|
HnswElement neighborElement = HnswPtrAccess(base, hc->element);
|
||||||
|
OffsetNumber offno = neighborElement->neighborOffno;
|
||||||
|
|
||||||
/* Get latest neighbors since they may have changed */
|
/* Get latest neighbors since they may have changed */
|
||||||
/* Do not lock yet since selecting neighbors can take time */
|
/* Do not lock yet since selecting neighbors can take time */
|
||||||
HnswLoadNeighbors(hc->element, index, m);
|
HnswLoadNeighbors(neighborElement, index, m);
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Could improve performance for vacuuming by checking neighbors
|
* Could improve performance for vacuuming by checking neighbors
|
||||||
@@ -334,17 +374,25 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
|||||||
*/
|
*/
|
||||||
|
|
||||||
/* Select neighbors */
|
/* Select neighbors */
|
||||||
HnswUpdateConnection(e, hc, lm, lc, &idx, index, procinfo, collation);
|
HnswUpdateConnection(NULL, e, hc, lm, lc, &idx, index, procinfo, collation);
|
||||||
|
|
||||||
/* New element was not selected as a neighbor */
|
/* New element was not selected as a neighbor */
|
||||||
if (idx == -1)
|
if (idx == -1)
|
||||||
continue;
|
continue;
|
||||||
|
|
||||||
/* Register page */
|
/* Register page */
|
||||||
buf = ReadBuffer(index, hc->element->neighborPage);
|
buf = ReadBuffer(index, neighborElement->neighborPage);
|
||||||
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
||||||
|
if (building)
|
||||||
|
{
|
||||||
|
state = NULL;
|
||||||
|
page = BufferGetPage(buf);
|
||||||
|
}
|
||||||
|
else
|
||||||
|
{
|
||||||
state = GenericXLogStart(index);
|
state = GenericXLogStart(index);
|
||||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||||
|
}
|
||||||
|
|
||||||
/* Get tuple */
|
/* Get tuple */
|
||||||
itemid = PageGetItemId(page, offno);
|
itemid = PageGetItemId(page, offno);
|
||||||
@@ -352,7 +400,7 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
|||||||
ntupSize = ItemIdGetLength(itemid);
|
ntupSize = ItemIdGetLength(itemid);
|
||||||
|
|
||||||
/* Calculate index for update */
|
/* Calculate index for update */
|
||||||
startIdx = (hc->element->level - lc) * m;
|
startIdx = (neighborElement->level - lc) * m;
|
||||||
|
|
||||||
/* Check for existing connection */
|
/* Check for existing connection */
|
||||||
if (checkExisting && ConnectionExists(e, ntup, startIdx, lm))
|
if (checkExisting && ConnectionExists(e, ntup, startIdx, lm))
|
||||||
@@ -386,9 +434,12 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
|||||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
if (building)
|
||||||
|
MarkBufferDirty(buf);
|
||||||
|
else
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
}
|
}
|
||||||
else
|
else if (!building)
|
||||||
GenericXLogAbort(state);
|
GenericXLogAbort(state);
|
||||||
|
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
@@ -400,23 +451,34 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
|||||||
* Add a heap TID to an existing element
|
* Add a heap TID to an existing element
|
||||||
*/
|
*/
|
||||||
static bool
|
static bool
|
||||||
HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
|
HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup, bool building)
|
||||||
{
|
{
|
||||||
Buffer buf;
|
Buffer buf;
|
||||||
Page page;
|
Page page;
|
||||||
GenericXLogState *state;
|
GenericXLogState *state;
|
||||||
Size etupSize = HNSW_ELEMENT_TUPLE_SIZE(dup->vec->dim);
|
ItemId itemid;
|
||||||
HnswElementTuple etup;
|
HnswElementTuple etup;
|
||||||
|
Size etupSize;
|
||||||
int i;
|
int i;
|
||||||
|
|
||||||
/* Read page */
|
/* Read page */
|
||||||
buf = ReadBuffer(index, dup->blkno);
|
buf = ReadBuffer(index, dup->blkno);
|
||||||
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
||||||
|
if (building)
|
||||||
|
{
|
||||||
|
state = NULL;
|
||||||
|
page = BufferGetPage(buf);
|
||||||
|
}
|
||||||
|
else
|
||||||
|
{
|
||||||
state = GenericXLogStart(index);
|
state = GenericXLogStart(index);
|
||||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||||
|
}
|
||||||
|
|
||||||
/* Find space */
|
/* Find space */
|
||||||
etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, dup->offno));
|
itemid = PageGetItemId(page, dup->offno);
|
||||||
|
etup = (HnswElementTuple) PageGetItem(page, itemid);
|
||||||
|
etupSize = ItemIdGetLength(itemid);
|
||||||
for (i = 0; i < HNSW_HEAPTIDS; i++)
|
for (i = 0; i < HNSW_HEAPTIDS; i++)
|
||||||
{
|
{
|
||||||
if (!ItemPointerIsValid(&etup->heaptids[i]))
|
if (!ItemPointerIsValid(&etup->heaptids[i]))
|
||||||
@@ -426,82 +488,97 @@ HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
|
|||||||
/* Either being deleted or we lost our chance to another backend */
|
/* Either being deleted or we lost our chance to another backend */
|
||||||
if (i == 0 || i == HNSW_HEAPTIDS)
|
if (i == 0 || i == HNSW_HEAPTIDS)
|
||||||
{
|
{
|
||||||
|
if (!building)
|
||||||
GenericXLogAbort(state);
|
GenericXLogAbort(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
return false;
|
return false;
|
||||||
}
|
}
|
||||||
|
|
||||||
/* Add heap TID */
|
/* Add heap TID */
|
||||||
etup->heaptids[i] = *((ItemPointer) linitial(element->heaptids));
|
etup->heaptids[i] = element->heaptids[0];
|
||||||
|
|
||||||
/* Overwrite tuple */
|
/* Overwrite tuple */
|
||||||
if (!PageIndexTupleOverwrite(page, dup->offno, (Item) etup, etupSize))
|
if (!PageIndexTupleOverwrite(page, dup->offno, (Item) etup, etupSize))
|
||||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
if (building)
|
||||||
|
MarkBufferDirty(buf);
|
||||||
|
else
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
|
|
||||||
return true;
|
return true;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
/*
|
||||||
|
* Find duplicate element
|
||||||
|
*/
|
||||||
|
static bool
|
||||||
|
HnswFindDuplicate(Relation index, HnswElement element, bool building)
|
||||||
|
{
|
||||||
|
char *base = NULL;
|
||||||
|
HnswNeighborArray *neighbors = HnswGetNeighbors(base, element, 0);
|
||||||
|
|
||||||
|
for (int i = 0; i < neighbors->length; i++)
|
||||||
|
{
|
||||||
|
HnswCandidate *neighbor = &neighbors->items[i];
|
||||||
|
HnswElement neighborElement = HnswPtrAccess(base, neighbor->element);
|
||||||
|
Datum value = HnswGetValue(base, element);
|
||||||
|
Datum neighborValue = HnswGetValue(base, neighborElement);
|
||||||
|
|
||||||
|
/* Exit early since ordered by distance */
|
||||||
|
if (!datumIsEqual(value, neighborValue, false, -1))
|
||||||
|
return false;
|
||||||
|
|
||||||
|
if (HnswAddDuplicate(index, element, neighborElement, building))
|
||||||
|
return true;
|
||||||
|
}
|
||||||
|
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Write changes to disk
|
* Write changes to disk
|
||||||
*/
|
*/
|
||||||
static void
|
static void
|
||||||
WriteElement(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement element, int m, int efConstruction, HnswElement dup, HnswElement entryPoint)
|
WriteElement(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement element, int m, int efConstruction, HnswElement entryPoint, bool building)
|
||||||
{
|
{
|
||||||
BlockNumber newInsertPage = InvalidBlockNumber;
|
BlockNumber newInsertPage = InvalidBlockNumber;
|
||||||
|
|
||||||
/* Try to add to existing page */
|
/* Look for duplicate */
|
||||||
if (dup != NULL)
|
if (HnswFindDuplicate(index, element, building))
|
||||||
{
|
|
||||||
if (HnswAddDuplicate(index, element, dup))
|
|
||||||
return;
|
return;
|
||||||
}
|
|
||||||
|
|
||||||
/* Write element and neighbor tuples */
|
/* Write element and neighbor tuples */
|
||||||
WriteNewElementPages(index, element, m, GetInsertPage(index), &newInsertPage);
|
WriteNewElementPages(index, element, m, GetInsertPage(index), &newInsertPage, building);
|
||||||
|
|
||||||
/* Update insert page if needed */
|
/* Update insert page if needed */
|
||||||
if (BlockNumberIsValid(newInsertPage))
|
if (BlockNumberIsValid(newInsertPage))
|
||||||
HnswUpdateMetaPage(index, 0, NULL, newInsertPage, MAIN_FORKNUM);
|
HnswUpdateMetaPage(index, 0, NULL, newInsertPage, MAIN_FORKNUM, building);
|
||||||
|
|
||||||
/* Update neighbors */
|
/* Update neighbors */
|
||||||
HnswUpdateNeighborPages(index, procinfo, collation, element, m, false);
|
HnswUpdateNeighborPages(index, procinfo, collation, element, m, false, building);
|
||||||
|
|
||||||
/* Update metapage if needed */
|
/* Update entry point if needed */
|
||||||
if (entryPoint == NULL || element->level > entryPoint->level)
|
if (entryPoint == NULL || element->level > entryPoint->level)
|
||||||
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_GREATER, element, InvalidBlockNumber, MAIN_FORKNUM);
|
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_GREATER, element, InvalidBlockNumber, MAIN_FORKNUM, building);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Insert a tuple into the index
|
* Insert a tuple into the index
|
||||||
*/
|
*/
|
||||||
bool
|
bool
|
||||||
HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel)
|
HnswInsertTupleOnDisk(Relation index, Datum value, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel, bool building)
|
||||||
{
|
{
|
||||||
Datum value;
|
|
||||||
FmgrInfo *normprocinfo;
|
|
||||||
HnswElement entryPoint;
|
HnswElement entryPoint;
|
||||||
HnswElement element;
|
HnswElement element;
|
||||||
int m;
|
int m;
|
||||||
int efConstruction = HnswGetEfConstruction(index);
|
int efConstruction = HnswGetEfConstruction(index);
|
||||||
FmgrInfo *procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
FmgrInfo *procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||||
Oid collation = index->rd_indcollation[0];
|
Oid collation = index->rd_indcollation[0];
|
||||||
HnswElement dup;
|
|
||||||
LOCKMODE lockmode = ShareLock;
|
LOCKMODE lockmode = ShareLock;
|
||||||
|
char *base = NULL;
|
||||||
/* Detoast once for all calls */
|
|
||||||
value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
|
|
||||||
|
|
||||||
/* Normalize if needed */
|
|
||||||
normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC);
|
|
||||||
if (normprocinfo != NULL)
|
|
||||||
{
|
|
||||||
if (!HnswNormValue(normprocinfo, collation, &value, NULL))
|
|
||||||
return false;
|
|
||||||
}
|
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Get a shared lock. This allows vacuum to ensure no in-flight inserts
|
* Get a shared lock. This allows vacuum to ensure no in-flight inserts
|
||||||
@@ -514,8 +591,8 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
|||||||
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
||||||
|
|
||||||
/* Create an element */
|
/* Create an element */
|
||||||
element = HnswInitElement(heap_tid, m, HnswGetMl(m), HnswGetMaxLevel(m));
|
element = HnswInitElement(base, heap_tid, m, HnswGetMl(m), HnswGetMaxLevel(m), NULL);
|
||||||
element->vec = DatumGetVector(value);
|
HnswPtrStore(base, element->value, DatumGetPointer(value));
|
||||||
|
|
||||||
/* Prevent concurrent inserts when likely updating entry point */
|
/* Prevent concurrent inserts when likely updating entry point */
|
||||||
if (entryPoint == NULL || element->level > entryPoint->level)
|
if (entryPoint == NULL || element->level > entryPoint->level)
|
||||||
@@ -532,13 +609,10 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
|||||||
}
|
}
|
||||||
|
|
||||||
/* Insert element in graph */
|
/* Insert element in graph */
|
||||||
HnswInsertElement(element, entryPoint, index, procinfo, collation, m, efConstruction, false);
|
HnswInsertElement(base, element, entryPoint, index, procinfo, collation, m, efConstruction, false);
|
||||||
|
|
||||||
/* Look for duplicate */
|
|
||||||
dup = HnswFindDuplicate(element);
|
|
||||||
|
|
||||||
/* Write to disk */
|
/* Write to disk */
|
||||||
WriteElement(index, procinfo, collation, element, m, efConstruction, dup, entryPoint);
|
WriteElement(index, procinfo, collation, element, m, efConstruction, entryPoint, building);
|
||||||
|
|
||||||
/* Release lock */
|
/* Release lock */
|
||||||
UnlockPage(index, HNSW_UPDATE_LOCK, lockmode);
|
UnlockPage(index, HNSW_UPDATE_LOCK, lockmode);
|
||||||
@@ -546,6 +620,30 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
|||||||
return true;
|
return true;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
/*
|
||||||
|
* Insert a tuple into the index
|
||||||
|
*/
|
||||||
|
static void
|
||||||
|
HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel)
|
||||||
|
{
|
||||||
|
Datum value;
|
||||||
|
FmgrInfo *normprocinfo;
|
||||||
|
Oid collation = index->rd_indcollation[0];
|
||||||
|
|
||||||
|
/* Detoast once for all calls */
|
||||||
|
value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
|
||||||
|
|
||||||
|
/* Normalize if needed */
|
||||||
|
normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC);
|
||||||
|
if (normprocinfo != NULL)
|
||||||
|
{
|
||||||
|
if (!HnswNormValue(normprocinfo, collation, &value, NULL))
|
||||||
|
return;
|
||||||
|
}
|
||||||
|
|
||||||
|
HnswInsertTupleOnDisk(index, value, values, isnull, heap_tid, heapRel, false);
|
||||||
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Insert a tuple into the index
|
* Insert a tuple into the index
|
||||||
*/
|
*/
|
||||||
|
|||||||
@@ -21,6 +21,7 @@ GetScanItems(IndexScanDesc scan, Datum q)
|
|||||||
List *w;
|
List *w;
|
||||||
int m;
|
int m;
|
||||||
HnswElement entryPoint;
|
HnswElement entryPoint;
|
||||||
|
char *base = NULL;
|
||||||
|
|
||||||
/* Get m and entry point */
|
/* Get m and entry point */
|
||||||
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
||||||
@@ -28,15 +29,15 @@ GetScanItems(IndexScanDesc scan, Datum q)
|
|||||||
if (entryPoint == NULL)
|
if (entryPoint == NULL)
|
||||||
return NIL;
|
return NIL;
|
||||||
|
|
||||||
ep = list_make1(HnswEntryCandidate(entryPoint, q, index, procinfo, collation, false));
|
ep = list_make1(HnswEntryCandidate(base, entryPoint, q, index, procinfo, collation, false));
|
||||||
|
|
||||||
for (int lc = entryPoint->level; lc >= 1; lc--)
|
for (int lc = entryPoint->level; lc >= 1; lc--)
|
||||||
{
|
{
|
||||||
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, m, false, NULL);
|
w = HnswSearchLayer(base, q, ep, 1, lc, index, procinfo, collation, m, false, NULL);
|
||||||
ep = w;
|
ep = w;
|
||||||
}
|
}
|
||||||
|
|
||||||
return HnswSearchLayer(q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
|
return HnswSearchLayer(base, q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -184,19 +185,19 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
|
|||||||
|
|
||||||
while (list_length(so->w) > 0)
|
while (list_length(so->w) > 0)
|
||||||
{
|
{
|
||||||
|
char *base = NULL;
|
||||||
HnswCandidate *hc = llast(so->w);
|
HnswCandidate *hc = llast(so->w);
|
||||||
|
HnswElement element = HnswPtrAccess(base, hc->element);
|
||||||
ItemPointer heaptid;
|
ItemPointer heaptid;
|
||||||
|
|
||||||
/* Move to next element if no valid heap TIDs */
|
/* Move to next element if no valid heap TIDs */
|
||||||
if (list_length(hc->element->heaptids) == 0)
|
if (element->heaptidsLength == 0)
|
||||||
{
|
{
|
||||||
so->w = list_delete_last(so->w);
|
so->w = list_delete_last(so->w);
|
||||||
continue;
|
continue;
|
||||||
}
|
}
|
||||||
|
|
||||||
heaptid = llast(hc->element->heaptids);
|
heaptid = &element->heaptids[--element->heaptidsLength];
|
||||||
|
|
||||||
hc->element->heaptids = list_delete_last(hc->element->heaptids);
|
|
||||||
|
|
||||||
MemoryContextSwitchTo(oldCtx);
|
MemoryContextSwitchTo(oldCtx);
|
||||||
|
|
||||||
|
|||||||
571
src/hnswutils.c
571
src/hnswutils.c
File diff suppressed because it is too large
Load Diff
@@ -12,12 +12,9 @@
|
|||||||
* Check if deleted list contains an index TID
|
* Check if deleted list contains an index TID
|
||||||
*/
|
*/
|
||||||
static bool
|
static bool
|
||||||
DeletedContains(HTAB *deleted, ItemPointer indextid)
|
DeletedContains(tidhash_hash * deleted, ItemPointer indextid)
|
||||||
{
|
{
|
||||||
bool found;
|
return tidhash_lookup(deleted, *indextid) != NULL;
|
||||||
|
|
||||||
hash_search(deleted, indextid, HASH_FIND, &found);
|
|
||||||
return found;
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -62,7 +59,8 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
|
|||||||
/* Iterate over nodes */
|
/* Iterate over nodes */
|
||||||
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||||
{
|
{
|
||||||
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, offno));
|
ItemId itemid = PageGetItemId(page, offno);
|
||||||
|
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, itemid);
|
||||||
int idx = 0;
|
int idx = 0;
|
||||||
bool itemUpdated = false;
|
bool itemUpdated = false;
|
||||||
|
|
||||||
@@ -93,7 +91,7 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
|
|||||||
|
|
||||||
if (itemUpdated)
|
if (itemUpdated)
|
||||||
{
|
{
|
||||||
Size etupSize = HNSW_ELEMENT_TUPLE_SIZE(etup->vec.dim);
|
Size etupSize = ItemIdGetLength(itemid);
|
||||||
|
|
||||||
/* Mark rest as invalid */
|
/* Mark rest as invalid */
|
||||||
for (int i = idx; i < HNSW_HEAPTIDS; i++)
|
for (int i = idx; i < HNSW_HEAPTIDS; i++)
|
||||||
@@ -109,11 +107,13 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
|
|||||||
if (!ItemPointerIsValid(&etup->heaptids[0]))
|
if (!ItemPointerIsValid(&etup->heaptids[0]))
|
||||||
{
|
{
|
||||||
ItemPointerData ip;
|
ItemPointerData ip;
|
||||||
|
bool found;
|
||||||
|
|
||||||
/* Add to deleted list */
|
/* Add to deleted list */
|
||||||
ItemPointerSet(&ip, blkno, offno);
|
ItemPointerSet(&ip, blkno, offno);
|
||||||
|
|
||||||
(void) hash_search(vacuumstate->deleted, &ip, HASH_ENTER, NULL);
|
tidhash_insert(vacuumstate->deleted, ip, &found);
|
||||||
|
Assert(!found);
|
||||||
}
|
}
|
||||||
else if (etup->level > highestLevel && !(entryPoint != NULL && blkno == entryPoint->blkno && offno == entryPoint->offno))
|
else if (etup->level > highestLevel && !(entryPoint != NULL && blkno == entryPoint->blkno && offno == entryPoint->offno))
|
||||||
{
|
{
|
||||||
@@ -205,15 +205,15 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
|
|||||||
return;
|
return;
|
||||||
|
|
||||||
/* Init fields */
|
/* Init fields */
|
||||||
HnswInitNeighbors(element, m);
|
HnswInitNeighbors(NULL, element, m, NULL);
|
||||||
element->heaptids = NIL;
|
element->heaptidsLength = 0;
|
||||||
|
|
||||||
/* Add element to graph, skipping itself */
|
/* Add element to graph, skipping itself */
|
||||||
HnswInsertElement(element, entryPoint, index, procinfo, collation, m, efConstruction, true);
|
HnswInsertElement(NULL, element, entryPoint, index, procinfo, collation, m, efConstruction, true);
|
||||||
|
|
||||||
/* Update neighbor tuple */
|
/* Update neighbor tuple */
|
||||||
/* Do this before getting page to minimize locking */
|
/* Do this before getting page to minimize locking */
|
||||||
HnswSetNeighborTuple(ntup, element, m);
|
HnswSetNeighborTuple(NULL, ntup, element, m);
|
||||||
|
|
||||||
/* Get neighbor page */
|
/* Get neighbor page */
|
||||||
buf = ReadBufferExtended(index, MAIN_FORKNUM, element->neighborPage, RBM_NORMAL, bas);
|
buf = ReadBufferExtended(index, MAIN_FORKNUM, element->neighborPage, RBM_NORMAL, bas);
|
||||||
@@ -230,7 +230,7 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
|
|||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
|
|
||||||
/* Update neighbors */
|
/* Update neighbors */
|
||||||
HnswUpdateNeighborPages(index, procinfo, collation, element, m, true);
|
HnswUpdateNeighborPages(index, procinfo, collation, element, m, true, false);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -286,7 +286,7 @@ RepairGraphEntryPoint(HnswVacuumState * vacuumstate)
|
|||||||
* point is outdated and empty, the entry point will be empty
|
* point is outdated and empty, the entry point will be empty
|
||||||
* until an element is repaired.
|
* until an element is repaired.
|
||||||
*/
|
*/
|
||||||
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_ALWAYS, highestPoint, InvalidBlockNumber, MAIN_FORKNUM);
|
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_ALWAYS, highestPoint, InvalidBlockNumber, MAIN_FORKNUM, false);
|
||||||
}
|
}
|
||||||
else
|
else
|
||||||
{
|
{
|
||||||
@@ -301,7 +301,7 @@ RepairGraphEntryPoint(HnswVacuumState * vacuumstate)
|
|||||||
{
|
{
|
||||||
/* Reset neighbors from previous update */
|
/* Reset neighbors from previous update */
|
||||||
if (highestPoint != NULL)
|
if (highestPoint != NULL)
|
||||||
highestPoint->neighbors = NULL;
|
HnswPtrStore((char *) NULL, highestPoint->neighbors, (HnswNeighborArrayPtr *) NULL);
|
||||||
|
|
||||||
RepairGraphElement(vacuumstate, entryPoint, highestPoint);
|
RepairGraphElement(vacuumstate, entryPoint, highestPoint);
|
||||||
}
|
}
|
||||||
@@ -419,7 +419,7 @@ RepairGraph(HnswVacuumState * vacuumstate)
|
|||||||
* was replaced and highest point was outdated.
|
* was replaced and highest point was outdated.
|
||||||
*/
|
*/
|
||||||
if (entryPoint == NULL || element->level > entryPoint->level)
|
if (entryPoint == NULL || element->level > entryPoint->level)
|
||||||
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_GREATER, element, InvalidBlockNumber, MAIN_FORKNUM);
|
HnswUpdateMetaPage(index, HNSW_UPDATE_ENTRY_GREATER, element, InvalidBlockNumber, MAIN_FORKNUM, false);
|
||||||
|
|
||||||
/* Release lock */
|
/* Release lock */
|
||||||
UnlockPage(index, HNSW_UPDATE_LOCK, lockmode);
|
UnlockPage(index, HNSW_UPDATE_LOCK, lockmode);
|
||||||
@@ -477,7 +477,8 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
|||||||
/* Update element and neighbors together */
|
/* Update element and neighbors together */
|
||||||
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||||
{
|
{
|
||||||
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, offno));
|
ItemId itemid = PageGetItemId(page, offno);
|
||||||
|
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, itemid);
|
||||||
HnswNeighborTuple ntup;
|
HnswNeighborTuple ntup;
|
||||||
Size etupSize;
|
Size etupSize;
|
||||||
Size ntupSize;
|
Size ntupSize;
|
||||||
@@ -505,7 +506,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
|||||||
continue;
|
continue;
|
||||||
|
|
||||||
/* Calculate sizes */
|
/* Calculate sizes */
|
||||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(etup->vec.dim);
|
etupSize = ItemIdGetLength(itemid);
|
||||||
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(etup->level, vacuumstate->m);
|
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(etup->level, vacuumstate->m);
|
||||||
|
|
||||||
/* Get neighbor page */
|
/* Get neighbor page */
|
||||||
@@ -528,7 +529,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
|||||||
|
|
||||||
/* Overwrite element */
|
/* Overwrite element */
|
||||||
etup->deleted = 1;
|
etup->deleted = 1;
|
||||||
MemSet(&etup->vec.x, 0, etup->vec.dim * sizeof(float));
|
MemSet(&etup->data, 0, VARSIZE_ANY(&etup->data));
|
||||||
|
|
||||||
/* Overwrite neighbors */
|
/* Overwrite neighbors */
|
||||||
for (int i = 0; i < ntup->count; i++)
|
for (int i = 0; i < ntup->count; i++)
|
||||||
@@ -563,7 +564,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
|||||||
}
|
}
|
||||||
|
|
||||||
/* Update insert page last, after everything has been marked as deleted */
|
/* Update insert page last, after everything has been marked as deleted */
|
||||||
HnswUpdateMetaPage(index, 0, NULL, insertPage, MAIN_FORKNUM);
|
HnswUpdateMetaPage(index, 0, NULL, insertPage, MAIN_FORKNUM, false);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -573,7 +574,6 @@ static void
|
|||||||
InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkDeleteResult *stats, IndexBulkDeleteCallback callback, void *callback_state)
|
InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkDeleteResult *stats, IndexBulkDeleteCallback callback, void *callback_state)
|
||||||
{
|
{
|
||||||
Relation index = info->index;
|
Relation index = info->index;
|
||||||
HASHCTL hash_ctl;
|
|
||||||
|
|
||||||
if (stats == NULL)
|
if (stats == NULL)
|
||||||
stats = (IndexBulkDeleteResult *) palloc0(sizeof(IndexBulkDeleteResult));
|
stats = (IndexBulkDeleteResult *) palloc0(sizeof(IndexBulkDeleteResult));
|
||||||
@@ -595,10 +595,7 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
|
|||||||
HnswGetMetaPageInfo(index, &vacuumstate->m, NULL);
|
HnswGetMetaPageInfo(index, &vacuumstate->m, NULL);
|
||||||
|
|
||||||
/* Create hash table */
|
/* Create hash table */
|
||||||
hash_ctl.keysize = sizeof(ItemPointerData);
|
vacuumstate->deleted = tidhash_create(CurrentMemoryContext, 256, NULL);
|
||||||
hash_ctl.entrysize = sizeof(ItemPointerData);
|
|
||||||
hash_ctl.hcxt = CurrentMemoryContext;
|
|
||||||
vacuumstate->deleted = hash_create("hnswbulkdelete indextids", 256, &hash_ctl, HASH_ELEM | HASH_BLOBS | HASH_CONTEXT);
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -607,7 +604,7 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
|
|||||||
static void
|
static void
|
||||||
FreeVacuumState(HnswVacuumState * vacuumstate)
|
FreeVacuumState(HnswVacuumState * vacuumstate)
|
||||||
{
|
{
|
||||||
hash_destroy(vacuumstate->deleted);
|
tidhash_destroy(vacuumstate->deleted);
|
||||||
FreeAccessStrategy(vacuumstate->bas);
|
FreeAccessStrategy(vacuumstate->bas);
|
||||||
pfree(vacuumstate->ntup);
|
pfree(vacuumstate->ntup);
|
||||||
MemoryContextDelete(vacuumstate->tmpCtx);
|
MemoryContextDelete(vacuumstate->tmpCtx);
|
||||||
|
|||||||
@@ -11,7 +11,6 @@
|
|||||||
#include "miscadmin.h"
|
#include "miscadmin.h"
|
||||||
#include "storage/bufmgr.h"
|
#include "storage/bufmgr.h"
|
||||||
#include "tcop/tcopprot.h"
|
#include "tcop/tcopprot.h"
|
||||||
#include "utils/datum.h"
|
|
||||||
#include "utils/memutils.h"
|
#include "utils/memutils.h"
|
||||||
|
|
||||||
#if PG_VERSION_NUM >= 140000
|
#if PG_VERSION_NUM >= 140000
|
||||||
@@ -66,18 +65,11 @@
|
|||||||
static void
|
static void
|
||||||
AddSample(Datum *values, IvfflatBuildState * buildstate)
|
AddSample(Datum *values, IvfflatBuildState * buildstate)
|
||||||
{
|
{
|
||||||
MemoryContext oldCtx;
|
VectorArray samples = buildstate->samples;
|
||||||
Datum value;
|
int targsamples = samples->maxlen;
|
||||||
int targsamples = buildstate->targsamples;
|
|
||||||
|
|
||||||
/* Use memory context since detoast can allocate */
|
|
||||||
oldCtx = MemoryContextSwitchTo(buildstate->tmpCtx);
|
|
||||||
|
|
||||||
/* Detoast once for all calls */
|
/* Detoast once for all calls */
|
||||||
value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
|
Datum value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
|
||||||
|
|
||||||
/* Restore memory context */
|
|
||||||
MemoryContextSwitchTo(oldCtx);
|
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Normalize with KMEANS_NORM_PROC since spherical distance function
|
* Normalize with KMEANS_NORM_PROC since spherical distance function
|
||||||
@@ -89,23 +81,18 @@ AddSample(Datum *values, IvfflatBuildState * buildstate)
|
|||||||
return;
|
return;
|
||||||
}
|
}
|
||||||
|
|
||||||
/* Copy datum */
|
if (samples->length < targsamples)
|
||||||
value = datumCopy(value, false, -1);
|
{
|
||||||
|
VectorArraySet(samples, samples->length, DatumGetVector(value));
|
||||||
/* Reset memory context */
|
samples->length++;
|
||||||
MemoryContextReset(buildstate->tmpCtx);
|
}
|
||||||
|
|
||||||
if (list_length(buildstate->samples) < targsamples)
|
|
||||||
buildstate->samples = lappend(buildstate->samples, DatumGetVector(value));
|
|
||||||
else
|
else
|
||||||
{
|
{
|
||||||
if (buildstate->rowstoskip < 0)
|
if (buildstate->rowstoskip < 0)
|
||||||
buildstate->rowstoskip = reservoir_get_next_S(&buildstate->rstate, list_length(buildstate->samples), targsamples);
|
buildstate->rowstoskip = reservoir_get_next_S(&buildstate->rstate, samples->length, targsamples);
|
||||||
|
|
||||||
if (buildstate->rowstoskip <= 0)
|
if (buildstate->rowstoskip <= 0)
|
||||||
{
|
{
|
||||||
ListCell *lc;
|
|
||||||
|
|
||||||
#if PG_VERSION_NUM >= 150000
|
#if PG_VERSION_NUM >= 150000
|
||||||
int k = (int) (targsamples * sampler_random_fract(&buildstate->rstate.randstate));
|
int k = (int) (targsamples * sampler_random_fract(&buildstate->rstate.randstate));
|
||||||
#else
|
#else
|
||||||
@@ -113,8 +100,7 @@ AddSample(Datum *values, IvfflatBuildState * buildstate)
|
|||||||
#endif
|
#endif
|
||||||
|
|
||||||
Assert(k >= 0 && k < targsamples);
|
Assert(k >= 0 && k < targsamples);
|
||||||
lc = list_nth_cell(buildstate->samples, k);
|
VectorArraySet(samples, k, DatumGetVector(value));
|
||||||
lfirst(lc) = DatumGetVector(value);
|
|
||||||
}
|
}
|
||||||
|
|
||||||
buildstate->rowstoskip -= 1;
|
buildstate->rowstoskip -= 1;
|
||||||
@@ -129,13 +115,21 @@ SampleCallback(Relation index, CALLBACK_ITEM_POINTER, Datum *values,
|
|||||||
bool *isnull, bool tupleIsAlive, void *state)
|
bool *isnull, bool tupleIsAlive, void *state)
|
||||||
{
|
{
|
||||||
IvfflatBuildState *buildstate = (IvfflatBuildState *) state;
|
IvfflatBuildState *buildstate = (IvfflatBuildState *) state;
|
||||||
|
MemoryContext oldCtx;
|
||||||
|
|
||||||
/* Skip nulls */
|
/* Skip nulls */
|
||||||
if (isnull[0])
|
if (isnull[0])
|
||||||
return;
|
return;
|
||||||
|
|
||||||
|
/* Use memory context since detoast can allocate */
|
||||||
|
oldCtx = MemoryContextSwitchTo(buildstate->tmpCtx);
|
||||||
|
|
||||||
/* Add sample */
|
/* Add sample */
|
||||||
AddSample(values, buildstate);
|
AddSample(values, state);
|
||||||
|
|
||||||
|
/* Reset memory context */
|
||||||
|
MemoryContextSwitchTo(oldCtx);
|
||||||
|
MemoryContextReset(buildstate->tmpCtx);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -144,7 +138,7 @@ SampleCallback(Relation index, CALLBACK_ITEM_POINTER, Datum *values,
|
|||||||
static void
|
static void
|
||||||
SampleRows(IvfflatBuildState * buildstate)
|
SampleRows(IvfflatBuildState * buildstate)
|
||||||
{
|
{
|
||||||
int targsamples = buildstate->targsamples;
|
int targsamples = buildstate->samples->maxlen;
|
||||||
BlockNumber totalblocks = RelationGetNumberOfBlocks(buildstate->heap);
|
BlockNumber totalblocks = RelationGetNumberOfBlocks(buildstate->heap);
|
||||||
|
|
||||||
buildstate->rowstoskip = -1;
|
buildstate->rowstoskip = -1;
|
||||||
@@ -455,13 +449,12 @@ ComputeCenters(IvfflatBuildState * buildstate)
|
|||||||
|
|
||||||
/* Sample rows */
|
/* Sample rows */
|
||||||
/* TODO Ensure within maintenance_work_mem */
|
/* TODO Ensure within maintenance_work_mem */
|
||||||
buildstate->samples = NIL;
|
buildstate->samples = VectorArrayInit(numSamples, buildstate->dimensions);
|
||||||
buildstate->targsamples = numSamples;
|
|
||||||
if (buildstate->heap != NULL)
|
if (buildstate->heap != NULL)
|
||||||
{
|
{
|
||||||
SampleRows(buildstate);
|
SampleRows(buildstate);
|
||||||
|
|
||||||
if (list_length(buildstate->samples) < buildstate->lists)
|
if (buildstate->samples->length < buildstate->lists)
|
||||||
{
|
{
|
||||||
ereport(NOTICE,
|
ereport(NOTICE,
|
||||||
(errmsg("ivfflat index created with little data"),
|
(errmsg("ivfflat index created with little data"),
|
||||||
@@ -474,7 +467,7 @@ ComputeCenters(IvfflatBuildState * buildstate)
|
|||||||
IvfflatBench("k-means", IvfflatKmeans(buildstate->index, buildstate->samples, buildstate->centers));
|
IvfflatBench("k-means", IvfflatKmeans(buildstate->index, buildstate->samples, buildstate->centers));
|
||||||
|
|
||||||
/* Free samples before we allocate more memory */
|
/* Free samples before we allocate more memory */
|
||||||
list_free_deep(buildstate->samples);
|
VectorArrayFree(buildstate->samples);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -550,10 +543,10 @@ CreateListPages(Relation index, VectorArray centers, int dimensions,
|
|||||||
pfree(list);
|
pfree(list);
|
||||||
}
|
}
|
||||||
|
|
||||||
|
#ifdef IVFFLAT_KMEANS_DEBUG
|
||||||
/*
|
/*
|
||||||
* Print k-means metrics
|
* Print k-means metrics
|
||||||
*/
|
*/
|
||||||
#ifdef IVFFLAT_KMEANS_DEBUG
|
|
||||||
static void
|
static void
|
||||||
PrintKmeansMetrics(IvfflatBuildState * buildstate)
|
PrintKmeansMetrics(IvfflatBuildState * buildstate)
|
||||||
{
|
{
|
||||||
|
|||||||
@@ -80,10 +80,6 @@
|
|||||||
#define RandomInt() random()
|
#define RandomInt() random()
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
#if PG_VERSION_NUM < 130000
|
|
||||||
#define list_sort(list, cmp) list_qsort(list, cmp)
|
|
||||||
#endif
|
|
||||||
|
|
||||||
/* Variables */
|
/* Variables */
|
||||||
extern int ivfflat_probes;
|
extern int ivfflat_probes;
|
||||||
|
|
||||||
@@ -182,8 +178,7 @@ typedef struct IvfflatBuildState
|
|||||||
Oid collation;
|
Oid collation;
|
||||||
|
|
||||||
/* Variables */
|
/* Variables */
|
||||||
List *samples;
|
VectorArray samples;
|
||||||
int targsamples;
|
|
||||||
VectorArray centers;
|
VectorArray centers;
|
||||||
ListInfo *listInfo;
|
ListInfo *listInfo;
|
||||||
Vector *normvec;
|
Vector *normvec;
|
||||||
@@ -279,7 +274,7 @@ typedef IvfflatScanOpaqueData * IvfflatScanOpaque;
|
|||||||
VectorArray VectorArrayInit(int maxlen, int dimensions);
|
VectorArray VectorArrayInit(int maxlen, int dimensions);
|
||||||
void VectorArrayFree(VectorArray arr);
|
void VectorArrayFree(VectorArray arr);
|
||||||
void PrintVectorArray(char *msg, VectorArray arr);
|
void PrintVectorArray(char *msg, VectorArray arr);
|
||||||
void IvfflatKmeans(Relation index, List *samples, VectorArray centers);
|
void IvfflatKmeans(Relation index, VectorArray samples, VectorArray centers);
|
||||||
FmgrInfo *IvfflatOptionalProcInfo(Relation index, uint16 procnum);
|
FmgrInfo *IvfflatOptionalProcInfo(Relation index, uint16 procnum);
|
||||||
bool IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
bool IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
||||||
int IvfflatGetLists(Relation index);
|
int IvfflatGetLists(Relation index);
|
||||||
|
|||||||
@@ -6,26 +6,30 @@
|
|||||||
#include "ivfflat.h"
|
#include "ivfflat.h"
|
||||||
#include "miscadmin.h"
|
#include "miscadmin.h"
|
||||||
|
|
||||||
|
#ifdef IVFFLAT_MEMORY
|
||||||
|
#include "utils/memutils.h"
|
||||||
|
#endif
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Initialize with kmeans++
|
* Initialize with kmeans++
|
||||||
*
|
*
|
||||||
* https://theory.stanford.edu/~sergei/papers/kMeansPP-soda.pdf
|
* https://theory.stanford.edu/~sergei/papers/kMeansPP-soda.pdf
|
||||||
*/
|
*/
|
||||||
static void
|
static void
|
||||||
InitCenters(Relation index, List *samples, VectorArray centers, float *lowerBound)
|
InitCenters(Relation index, VectorArray samples, VectorArray centers, float *lowerBound)
|
||||||
{
|
{
|
||||||
FmgrInfo *procinfo;
|
FmgrInfo *procinfo;
|
||||||
Oid collation;
|
Oid collation;
|
||||||
int64 j;
|
int64 j;
|
||||||
float *weight = palloc(list_length(samples) * sizeof(float));
|
float *weight = palloc(samples->length * sizeof(float));
|
||||||
int numCenters = centers->maxlen;
|
int numCenters = centers->maxlen;
|
||||||
int numSamples = list_length(samples);
|
int numSamples = samples->length;
|
||||||
|
|
||||||
procinfo = index_getprocinfo(index, 1, IVFFLAT_KMEANS_DISTANCE_PROC);
|
procinfo = index_getprocinfo(index, 1, IVFFLAT_KMEANS_DISTANCE_PROC);
|
||||||
collation = index->rd_indcollation[0];
|
collation = index->rd_indcollation[0];
|
||||||
|
|
||||||
/* Choose an initial center uniformly at random */
|
/* Choose an initial center uniformly at random */
|
||||||
VectorArraySet(centers, 0, list_nth(samples, RandomInt() % list_length(samples)));
|
VectorArraySet(centers, 0, VectorArrayGet(samples, RandomInt() % samples->length));
|
||||||
centers->length++;
|
centers->length++;
|
||||||
|
|
||||||
for (j = 0; j < numSamples; j++)
|
for (j = 0; j < numSamples; j++)
|
||||||
@@ -42,7 +46,7 @@ InitCenters(Relation index, List *samples, VectorArray centers, float *lowerBoun
|
|||||||
|
|
||||||
for (j = 0; j < numSamples; j++)
|
for (j = 0; j < numSamples; j++)
|
||||||
{
|
{
|
||||||
Vector *vec = list_nth(samples, j);
|
Vector *vec = VectorArrayGet(samples, j);
|
||||||
double distance;
|
double distance;
|
||||||
|
|
||||||
/* Only need to compute distance for new center */
|
/* Only need to compute distance for new center */
|
||||||
@@ -74,7 +78,7 @@ InitCenters(Relation index, List *samples, VectorArray centers, float *lowerBoun
|
|||||||
break;
|
break;
|
||||||
}
|
}
|
||||||
|
|
||||||
VectorArraySet(centers, i + 1, list_nth(samples, j));
|
VectorArraySet(centers, i + 1, VectorArrayGet(samples, j));
|
||||||
centers->length++;
|
centers->length++;
|
||||||
}
|
}
|
||||||
|
|
||||||
@@ -106,41 +110,25 @@ CompareVectors(const void *a, const void *b)
|
|||||||
return vector_cmp_internal((Vector *) a, (Vector *) b);
|
return vector_cmp_internal((Vector *) a, (Vector *) b);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
|
||||||
* Compare list vectors
|
|
||||||
*/
|
|
||||||
static int
|
|
||||||
#if PG_VERSION_NUM >= 130000
|
|
||||||
CompareListVectors(const ListCell *a, const ListCell *b)
|
|
||||||
#else
|
|
||||||
CompareListVectors(const void *a, const void *b)
|
|
||||||
#endif
|
|
||||||
{
|
|
||||||
Vector *va = lfirst((ListCell *) a);
|
|
||||||
Vector *vb = lfirst((ListCell *) b);
|
|
||||||
|
|
||||||
return CompareVectors(va, vb);
|
|
||||||
}
|
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Quick approach if we have little data
|
* Quick approach if we have little data
|
||||||
*/
|
*/
|
||||||
static void
|
static void
|
||||||
QuickCenters(Relation index, List *samples, VectorArray centers)
|
QuickCenters(Relation index, VectorArray samples, VectorArray centers)
|
||||||
{
|
{
|
||||||
int dimensions = centers->dim;
|
int dimensions = centers->dim;
|
||||||
Oid collation = index->rd_indcollation[0];
|
Oid collation = index->rd_indcollation[0];
|
||||||
FmgrInfo *normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_KMEANS_NORM_PROC);
|
FmgrInfo *normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_KMEANS_NORM_PROC);
|
||||||
|
|
||||||
/* Copy existing vectors while avoiding duplicates */
|
/* Copy existing vectors while avoiding duplicates */
|
||||||
if (list_length(samples) > 0)
|
if (samples->length > 0)
|
||||||
{
|
{
|
||||||
list_sort(samples, CompareListVectors);
|
qsort(samples->items, samples->length, VECTOR_SIZE(samples->dim), CompareVectors);
|
||||||
for (int i = 0; i < list_length(samples); i++)
|
for (int i = 0; i < samples->length; i++)
|
||||||
{
|
{
|
||||||
Vector *vec = list_nth(samples, i);
|
Vector *vec = VectorArrayGet(samples, i);
|
||||||
|
|
||||||
if (i == 0 || CompareVectors(vec, list_nth(samples, i - 1)) != 0)
|
if (i == 0 || CompareVectors(vec, VectorArrayGet(samples, i - 1)) != 0)
|
||||||
{
|
{
|
||||||
VectorArraySet(centers, centers->length, vec);
|
VectorArraySet(centers, centers->length, vec);
|
||||||
centers->length++;
|
centers->length++;
|
||||||
@@ -167,6 +155,23 @@ QuickCenters(Relation index, List *samples, VectorArray centers)
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
#ifdef IVFFLAT_MEMORY
|
||||||
|
/*
|
||||||
|
* Show memory usage
|
||||||
|
*/
|
||||||
|
static void
|
||||||
|
ShowMemoryUsage(Size estimatedSize)
|
||||||
|
{
|
||||||
|
#if PG_VERSION_NUM >= 130000
|
||||||
|
elog(INFO, "total memory: %zu MB",
|
||||||
|
MemoryContextMemAllocated(CurrentMemoryContext, true) / (1024 * 1024));
|
||||||
|
#else
|
||||||
|
MemoryContextStats(CurrentMemoryContext);
|
||||||
|
#endif
|
||||||
|
elog(INFO, "estimated memory: %zu MB", estimatedSize / (1024 * 1024));
|
||||||
|
}
|
||||||
|
#endif
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Use Elkan for performance. This requires distance function to satisfy triangle inequality.
|
* Use Elkan for performance. This requires distance function to satisfy triangle inequality.
|
||||||
*
|
*
|
||||||
@@ -176,7 +181,7 @@ QuickCenters(Relation index, List *samples, VectorArray centers)
|
|||||||
* https://www.aaai.org/Papers/ICML/2003/ICML03-022.pdf
|
* https://www.aaai.org/Papers/ICML/2003/ICML03-022.pdf
|
||||||
*/
|
*/
|
||||||
static void
|
static void
|
||||||
ElkanKmeans(Relation index, List *samples, VectorArray centers)
|
ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||||
{
|
{
|
||||||
FmgrInfo *procinfo;
|
FmgrInfo *procinfo;
|
||||||
FmgrInfo *normprocinfo;
|
FmgrInfo *normprocinfo;
|
||||||
@@ -187,7 +192,7 @@ ElkanKmeans(Relation index, List *samples, VectorArray centers)
|
|||||||
int64 k;
|
int64 k;
|
||||||
int dimensions = centers->dim;
|
int dimensions = centers->dim;
|
||||||
int numCenters = centers->maxlen;
|
int numCenters = centers->maxlen;
|
||||||
int numSamples = list_length(samples);
|
int numSamples = samples->length;
|
||||||
VectorArray newCenters;
|
VectorArray newCenters;
|
||||||
int *centerCounts;
|
int *centerCounts;
|
||||||
int *closestCenters;
|
int *closestCenters;
|
||||||
@@ -198,7 +203,7 @@ ElkanKmeans(Relation index, List *samples, VectorArray centers)
|
|||||||
float *newcdist;
|
float *newcdist;
|
||||||
|
|
||||||
/* Calculate allocation sizes */
|
/* Calculate allocation sizes */
|
||||||
Size samplesSize = 0;
|
Size samplesSize = VECTOR_ARRAY_SIZE(samples->maxlen, samples->dim);
|
||||||
Size centersSize = VECTOR_ARRAY_SIZE(centers->maxlen, centers->dim);
|
Size centersSize = VECTOR_ARRAY_SIZE(centers->maxlen, centers->dim);
|
||||||
Size newCentersSize = VECTOR_ARRAY_SIZE(numCenters, dimensions);
|
Size newCentersSize = VECTOR_ARRAY_SIZE(numCenters, dimensions);
|
||||||
Size centerCountsSize = sizeof(int) * numCenters;
|
Size centerCountsSize = sizeof(int) * numCenters;
|
||||||
@@ -247,6 +252,10 @@ ElkanKmeans(Relation index, List *samples, VectorArray centers)
|
|||||||
vec->dim = dimensions;
|
vec->dim = dimensions;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
#ifdef IVFFLAT_MEMORY
|
||||||
|
ShowMemoryUsage(totalSize);
|
||||||
|
#endif
|
||||||
|
|
||||||
/* Pick initial centers */
|
/* Pick initial centers */
|
||||||
InitCenters(index, samples, centers, lowerBound);
|
InitCenters(index, samples, centers, lowerBound);
|
||||||
|
|
||||||
@@ -342,7 +351,7 @@ ElkanKmeans(Relation index, List *samples, VectorArray centers)
|
|||||||
if (upperBound[j] <= halfcdist[closestCenters[j] * numCenters + k])
|
if (upperBound[j] <= halfcdist[closestCenters[j] * numCenters + k])
|
||||||
continue;
|
continue;
|
||||||
|
|
||||||
vec = list_nth(samples, j);
|
vec = VectorArrayGet(samples, j);
|
||||||
|
|
||||||
/* Step 3a */
|
/* Step 3a */
|
||||||
if (rj)
|
if (rj)
|
||||||
@@ -393,7 +402,7 @@ ElkanKmeans(Relation index, List *samples, VectorArray centers)
|
|||||||
{
|
{
|
||||||
int closestCenter;
|
int closestCenter;
|
||||||
|
|
||||||
vec = list_nth(samples, j);
|
vec = VectorArrayGet(samples, j);
|
||||||
closestCenter = closestCenters[j];
|
closestCenter = closestCenters[j];
|
||||||
|
|
||||||
/* Increment sum and count of closest center */
|
/* Increment sum and count of closest center */
|
||||||
@@ -530,9 +539,9 @@ CheckCenters(Relation index, VectorArray centers)
|
|||||||
* We use spherical k-means for inner product and cosine
|
* We use spherical k-means for inner product and cosine
|
||||||
*/
|
*/
|
||||||
void
|
void
|
||||||
IvfflatKmeans(Relation index, List *samples, VectorArray centers)
|
IvfflatKmeans(Relation index, VectorArray samples, VectorArray centers)
|
||||||
{
|
{
|
||||||
if (list_length(samples) <= centers->maxlen)
|
if (samples->length <= centers->maxlen)
|
||||||
QuickCenters(index, samples, centers);
|
QuickCenters(index, samples, centers);
|
||||||
else
|
else
|
||||||
ElkanKmeans(index, samples, centers);
|
ElkanKmeans(index, samples, centers);
|
||||||
|
|||||||
48
src/vector.c
48
src/vector.c
@@ -89,7 +89,7 @@ CheckDim(int dim)
|
|||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Ensure finite elements
|
* Ensure finite element
|
||||||
*/
|
*/
|
||||||
static inline void
|
static inline void
|
||||||
CheckElement(float value)
|
CheckElement(float value)
|
||||||
@@ -437,17 +437,18 @@ vector_send(PG_FUNCTION_ARGS)
|
|||||||
|
|
||||||
/*
|
/*
|
||||||
* Convert vector to vector
|
* Convert vector to vector
|
||||||
|
* This is needed to check the type modifier
|
||||||
*/
|
*/
|
||||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(vector);
|
PGDLLEXPORT PG_FUNCTION_INFO_V1(vector);
|
||||||
Datum
|
Datum
|
||||||
vector(PG_FUNCTION_ARGS)
|
vector(PG_FUNCTION_ARGS)
|
||||||
{
|
{
|
||||||
Vector *arg = PG_GETARG_VECTOR_P(0);
|
Vector *vec = PG_GETARG_VECTOR_P(0);
|
||||||
int32 typmod = PG_GETARG_INT32(1);
|
int32 typmod = PG_GETARG_INT32(1);
|
||||||
|
|
||||||
CheckExpectedDim(typmod, arg->dim);
|
CheckExpectedDim(typmod, vec->dim);
|
||||||
|
|
||||||
PG_RETURN_POINTER(arg);
|
PG_RETURN_POINTER(vec);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -464,7 +465,6 @@ array_to_vector(PG_FUNCTION_ARGS)
|
|||||||
bool typbyval;
|
bool typbyval;
|
||||||
char typalign;
|
char typalign;
|
||||||
Datum *elemsp;
|
Datum *elemsp;
|
||||||
bool *nullsp;
|
|
||||||
int nelemsp;
|
int nelemsp;
|
||||||
|
|
||||||
if (ARR_NDIM(array) > 1)
|
if (ARR_NDIM(array) > 1)
|
||||||
@@ -478,7 +478,7 @@ array_to_vector(PG_FUNCTION_ARGS)
|
|||||||
errmsg("array must not contain nulls")));
|
errmsg("array must not contain nulls")));
|
||||||
|
|
||||||
get_typlenbyvalalign(ARR_ELEMTYPE(array), &typlen, &typbyval, &typalign);
|
get_typlenbyvalalign(ARR_ELEMTYPE(array), &typlen, &typbyval, &typalign);
|
||||||
deconstruct_array(array, ARR_ELEMTYPE(array), typlen, typbyval, typalign, &elemsp, &nullsp, &nelemsp);
|
deconstruct_array(array, ARR_ELEMTYPE(array), typlen, typbyval, typalign, &elemsp, NULL, &nelemsp);
|
||||||
|
|
||||||
CheckDim(nelemsp);
|
CheckDim(nelemsp);
|
||||||
CheckExpectedDim(typmod, nelemsp);
|
CheckExpectedDim(typmod, nelemsp);
|
||||||
@@ -512,6 +512,12 @@ array_to_vector(PG_FUNCTION_ARGS)
|
|||||||
errmsg("unsupported array type")));
|
errmsg("unsupported array type")));
|
||||||
}
|
}
|
||||||
|
|
||||||
|
/*
|
||||||
|
* Free allocation from deconstruct_array. Do not free individual elements
|
||||||
|
* when pass-by-reference since they point to original array.
|
||||||
|
*/
|
||||||
|
pfree(elemsp);
|
||||||
|
|
||||||
/* Check elements */
|
/* Check elements */
|
||||||
for (int i = 0; i < result->dim; i++)
|
for (int i = 0; i < result->dim; i++)
|
||||||
CheckElement(result->x[i]);
|
CheckElement(result->x[i]);
|
||||||
@@ -718,7 +724,7 @@ vector_spherical_distance(PG_FUNCTION_ARGS)
|
|||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Get the L1 distance between vectors
|
* Get the L1 distance between two vectors
|
||||||
*/
|
*/
|
||||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(l1_distance);
|
PGDLLEXPORT PG_FUNCTION_INFO_V1(l1_distance);
|
||||||
Datum
|
Datum
|
||||||
@@ -897,8 +903,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_lt);
|
|||||||
Datum
|
Datum
|
||||||
vector_lt(PG_FUNCTION_ARGS)
|
vector_lt(PG_FUNCTION_ARGS)
|
||||||
{
|
{
|
||||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||||
|
|
||||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) < 0);
|
PG_RETURN_BOOL(vector_cmp_internal(a, b) < 0);
|
||||||
}
|
}
|
||||||
@@ -910,8 +916,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_le);
|
|||||||
Datum
|
Datum
|
||||||
vector_le(PG_FUNCTION_ARGS)
|
vector_le(PG_FUNCTION_ARGS)
|
||||||
{
|
{
|
||||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||||
|
|
||||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) <= 0);
|
PG_RETURN_BOOL(vector_cmp_internal(a, b) <= 0);
|
||||||
}
|
}
|
||||||
@@ -923,8 +929,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_eq);
|
|||||||
Datum
|
Datum
|
||||||
vector_eq(PG_FUNCTION_ARGS)
|
vector_eq(PG_FUNCTION_ARGS)
|
||||||
{
|
{
|
||||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||||
|
|
||||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) == 0);
|
PG_RETURN_BOOL(vector_cmp_internal(a, b) == 0);
|
||||||
}
|
}
|
||||||
@@ -936,8 +942,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_ne);
|
|||||||
Datum
|
Datum
|
||||||
vector_ne(PG_FUNCTION_ARGS)
|
vector_ne(PG_FUNCTION_ARGS)
|
||||||
{
|
{
|
||||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||||
|
|
||||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) != 0);
|
PG_RETURN_BOOL(vector_cmp_internal(a, b) != 0);
|
||||||
}
|
}
|
||||||
@@ -949,8 +955,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_ge);
|
|||||||
Datum
|
Datum
|
||||||
vector_ge(PG_FUNCTION_ARGS)
|
vector_ge(PG_FUNCTION_ARGS)
|
||||||
{
|
{
|
||||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||||
|
|
||||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) >= 0);
|
PG_RETURN_BOOL(vector_cmp_internal(a, b) >= 0);
|
||||||
}
|
}
|
||||||
@@ -962,8 +968,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_gt);
|
|||||||
Datum
|
Datum
|
||||||
vector_gt(PG_FUNCTION_ARGS)
|
vector_gt(PG_FUNCTION_ARGS)
|
||||||
{
|
{
|
||||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||||
|
|
||||||
PG_RETURN_BOOL(vector_cmp_internal(a, b) > 0);
|
PG_RETURN_BOOL(vector_cmp_internal(a, b) > 0);
|
||||||
}
|
}
|
||||||
@@ -975,8 +981,8 @@ PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_cmp);
|
|||||||
Datum
|
Datum
|
||||||
vector_cmp(PG_FUNCTION_ARGS)
|
vector_cmp(PG_FUNCTION_ARGS)
|
||||||
{
|
{
|
||||||
Vector *a = (Vector *) PG_GETARG_VECTOR_P(0);
|
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||||
Vector *b = (Vector *) PG_GETARG_VECTOR_P(1);
|
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||||
|
|
||||||
PG_RETURN_INT32(vector_cmp_internal(a, b));
|
PG_RETURN_INT32(vector_cmp_internal(a, b));
|
||||||
}
|
}
|
||||||
|
|||||||
@@ -83,11 +83,46 @@ for my $i (0 .. $#operators)
|
|||||||
push(@expected, $res);
|
push(@expected, $res);
|
||||||
}
|
}
|
||||||
|
|
||||||
# Add index
|
# Build index serially
|
||||||
$node->safe_psql("postgres", "CREATE INDEX ON tst USING hnsw (v $opclass);");
|
$node->safe_psql("postgres", qq(
|
||||||
|
SET max_parallel_maintenance_workers = 0;
|
||||||
|
CREATE INDEX idx ON tst USING hnsw (v $opclass);
|
||||||
|
));
|
||||||
|
|
||||||
|
# Test approximate results
|
||||||
my $min = $operator eq "<#>" ? 0.80 : 0.99;
|
my $min = $operator eq "<#>" ? 0.80 : 0.99;
|
||||||
test_recall($min, $operator);
|
test_recall($min, $operator);
|
||||||
|
|
||||||
|
$node->safe_psql("postgres", "DROP INDEX idx;");
|
||||||
|
|
||||||
|
# Build index in parallel in memory
|
||||||
|
my ($ret, $stdout, $stderr) = $node->psql("postgres", qq(
|
||||||
|
SET client_min_messages = DEBUG;
|
||||||
|
SET min_parallel_table_scan_size = 1;
|
||||||
|
CREATE INDEX idx ON tst USING hnsw (v $opclass);
|
||||||
|
));
|
||||||
|
is($ret, 0, $stderr);
|
||||||
|
like($stderr, qr/using \d+ parallel workers/);
|
||||||
|
|
||||||
|
# Test approximate results
|
||||||
|
test_recall($min, $operator);
|
||||||
|
|
||||||
|
$node->safe_psql("postgres", "DROP INDEX idx;");
|
||||||
|
|
||||||
|
# Build index in parallel on disk
|
||||||
|
# Set parallel_workers on table to use workers with low maintenance_work_mem
|
||||||
|
($ret, $stdout, $stderr) = $node->psql("postgres", qq(
|
||||||
|
ALTER TABLE tst SET (parallel_workers = 2);
|
||||||
|
SET client_min_messages = DEBUG;
|
||||||
|
SET maintenance_work_mem = '4MB';
|
||||||
|
CREATE INDEX idx ON tst USING hnsw (v $opclass);
|
||||||
|
ALTER TABLE tst RESET (parallel_workers);
|
||||||
|
));
|
||||||
|
is($ret, 0, $stderr);
|
||||||
|
like($stderr, qr/using \d+ parallel workers/);
|
||||||
|
like($stderr, qr/hnsw graph no longer fits into maintenance_work_mem/);
|
||||||
|
|
||||||
|
$node->safe_psql("postgres", "DROP INDEX idx;");
|
||||||
}
|
}
|
||||||
|
|
||||||
done_testing();
|
done_testing();
|
||||||
|
|||||||
Reference in New Issue
Block a user