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hqann-bigi
...
svector
| Author | SHA1 | Date | |
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f90d52d562 | ||
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22a1b06924 | ||
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b17b9c1ca2 | ||
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492ae1225c |
@@ -1,6 +1,6 @@
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## 0.6.0 (unreleased)
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- Added support for inline filtering with HNSW
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- Added support for sparse vectors
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## 0.5.1 (2023-10-10)
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4
Makefile
4
Makefile
@@ -3,8 +3,8 @@ EXTVERSION = 0.5.1
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MODULE_big = vector
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DATA = $(wildcard sql/*--*.sql)
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OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/vector.o
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HEADERS = src/vector.h
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OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/svector.o src/vector.o
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HEADERS = src/svector.h src/vector.h
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TESTS = $(wildcard test/sql/*.sql)
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REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS))
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@@ -1,8 +1,8 @@
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EXTENSION = vector
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EXTVERSION = 0.5.1
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OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\vector.obj
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HEADERS = src\vector.h
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OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\svector.obj src\vector.obj
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HEADERS = src\svector.h src\vector.h
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REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged
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REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)
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27
README.md
27
README.md
@@ -315,12 +315,6 @@ Create an index on one [or more](https://www.postgresql.org/docs/current/indexes
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CREATE INDEX ON items (category_id);
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```
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Or a composite HNSW index for approximate search (added in 0.6.0)
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```sql
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CREATE INDEX ON items USING hnsw (embedding vector_l2_ops, category_id);
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```
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Or a [partial index](https://www.postgresql.org/docs/current/indexes-partial.html) on the vector column for approximate search
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```sql
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@@ -375,6 +369,26 @@ To speed up queries with an IVFFlat index, increase the number of inverted lists
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CREATE INDEX ON items USING ivfflat (embedding vector_l2_ops) WITH (lists = 1000);
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```
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## Sparse Vectors
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Create a sparse vector column with 10 dimensions
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```sql
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CREATE TABLE items (id bigserial PRIMARY KEY, embedding svector(10));
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```
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Insert vectors
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```sql
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INSERT INTO items (embedding) VALUES ('(0,1),(1,2),(2,3)|10|'), ('(0,4),(1,5),(4,6)|10|');
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```
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Get the nearest neighbors by L2 distance
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```sql
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SELECT * FROM items ORDER BY embedding <-> '(0,3),(1,1),(2,2)|10|' LIMIT 5;
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```
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## Languages
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Use pgvector from any language with a Postgres client. You can even generate and store vectors in one language and query them in another.
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@@ -718,7 +732,6 @@ Thanks to:
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- [k-means++: The Advantage of Careful Seeding](https://theory.stanford.edu/~sergei/papers/kMeansPP-soda.pdf)
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- [Concept Decompositions for Large Sparse Text Data using Clustering](https://www.cs.utexas.edu/users/inderjit/public_papers/concept_mlj.pdf)
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- [Efficient and Robust Approximate Nearest Neighbor Search using Hierarchical Navigable Small World Graphs](https://arxiv.org/ftp/arxiv/papers/1603/1603.09320.pdf)
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- [HQANN: Efficient and Robust Similarity Search for Hybrid Queries with Structured and Unstructured Constraints](https://arxiv.org/pdf/2207.07940.pdf)
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## History
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@@ -1,18 +1,79 @@
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-- complain if script is sourced in psql, rather than via CREATE EXTENSION
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\echo Use "ALTER EXTENSION vector UPDATE TO '0.6.0'" to load this file. \quit
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CREATE FUNCTION hnsw_attribute_distance(integer, integer) RETURNS float8
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AS 'MODULE_PATHNAME', 'hnsw_int4_attribute_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE TYPE svector;
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CREATE FUNCTION hnsw_attribute_distance(bigint, bigint) RETURNS float8
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AS 'MODULE_PATHNAME', 'hnsw_int8_attribute_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION svector_in(cstring, oid, integer) RETURNS svector
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE OPERATOR CLASS vector_integer_ops
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DEFAULT FOR TYPE integer USING hnsw AS
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OPERATOR 2 = (integer, integer),
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FUNCTION 3 hnsw_attribute_distance(integer, integer);
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CREATE FUNCTION svector_out(svector) RETURNS cstring
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE OPERATOR CLASS vector_bigint_ops
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DEFAULT FOR TYPE bigint USING hnsw AS
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OPERATOR 2 = (bigint, bigint),
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FUNCTION 3 hnsw_attribute_distance(bigint, bigint);
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CREATE FUNCTION svector_typmod_in(cstring[]) RETURNS integer
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION svector_recv(internal, oid, integer) RETURNS svector
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION svector_send(svector) RETURNS bytea
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE TYPE svector (
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INPUT = svector_in,
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OUTPUT = svector_out,
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TYPMOD_IN = svector_typmod_in,
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RECEIVE = svector_recv,
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SEND = svector_send,
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STORAGE = external
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);
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CREATE FUNCTION l2_distance(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME', 'svector_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION inner_product(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME', 'svector_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION cosine_distance(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME', 'svector_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION jaccard_distance(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME', 'svector_jaccard_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION svector_l2_squared_distance(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION svector_negative_inner_product(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION svector(svector, integer, boolean) RETURNS svector
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION vector_to_svector(vector, integer, boolean) RETURNS svector
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION svector_to_vector(svector, integer, boolean) RETURNS vector
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE CAST (svector AS svector)
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WITH FUNCTION svector(svector, integer, boolean) AS IMPLICIT;
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CREATE CAST (svector AS vector)
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WITH FUNCTION svector_to_vector(svector, integer, boolean) AS IMPLICIT;
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CREATE CAST (vector AS svector)
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WITH FUNCTION vector_to_svector(vector, integer, boolean) AS IMPLICIT;
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CREATE OPERATOR <-> (
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LEFTARG = svector, RIGHTARG = svector, PROCEDURE = l2_distance,
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COMMUTATOR = '<->'
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);
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CREATE OPERATOR <#> (
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LEFTARG = svector, RIGHTARG = svector, PROCEDURE = svector_negative_inner_product,
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COMMUTATOR = '<#>'
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);
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CREATE OPERATOR <=> (
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LEFTARG = svector, RIGHTARG = svector, PROCEDURE = cosine_distance,
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COMMUTATOR = '<=>'
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);
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@@ -291,20 +291,91 @@ CREATE OPERATOR CLASS vector_cosine_ops
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FUNCTION 1 vector_negative_inner_product(vector, vector),
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FUNCTION 2 vector_norm(vector);
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-- hnsw attributes
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--- svector type
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CREATE FUNCTION hnsw_attribute_distance(integer, integer) RETURNS float8
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AS 'MODULE_PATHNAME', 'hnsw_int4_attribute_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE TYPE svector;
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CREATE FUNCTION hnsw_attribute_distance(bigint, bigint) RETURNS float8
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AS 'MODULE_PATHNAME', 'hnsw_int8_attribute_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION svector_in(cstring, oid, integer) RETURNS svector
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE OPERATOR CLASS vector_integer_ops
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DEFAULT FOR TYPE integer USING hnsw AS
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OPERATOR 2 = (integer, integer),
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FUNCTION 3 hnsw_attribute_distance(integer, integer);
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CREATE FUNCTION svector_out(svector) RETURNS cstring
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE OPERATOR CLASS vector_bigint_ops
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DEFAULT FOR TYPE bigint USING hnsw AS
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OPERATOR 2 = (bigint, bigint),
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FUNCTION 3 hnsw_attribute_distance(bigint, bigint);
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CREATE FUNCTION svector_typmod_in(cstring[]) RETURNS integer
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION svector_recv(internal, oid, integer) RETURNS svector
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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CREATE FUNCTION svector_send(svector) RETURNS bytea
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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|
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CREATE TYPE svector (
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INPUT = svector_in,
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OUTPUT = svector_out,
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TYPMOD_IN = svector_typmod_in,
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RECEIVE = svector_recv,
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SEND = svector_send,
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STORAGE = external
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);
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-- svector functions
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CREATE FUNCTION l2_distance(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME', 'svector_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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|
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CREATE FUNCTION inner_product(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME', 'svector_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
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|
||||
CREATE FUNCTION cosine_distance(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME', 'svector_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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||||
|
||||
CREATE FUNCTION jaccard_distance(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME', 'svector_jaccard_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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|
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-- svector private functions
|
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|
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CREATE FUNCTION svector_l2_squared_distance(svector, svector) RETURNS float8
|
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||
|
||||
CREATE FUNCTION svector_negative_inner_product(svector, svector) RETURNS float8
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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|
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-- svector cast functions
|
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|
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CREATE FUNCTION svector(svector, integer, boolean) RETURNS svector
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
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|
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CREATE FUNCTION vector_to_svector(vector, integer, boolean) RETURNS svector
|
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
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|
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CREATE FUNCTION svector_to_vector(svector, integer, boolean) RETURNS vector
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
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|
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-- svector casts
|
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|
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CREATE CAST (svector AS svector)
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WITH FUNCTION svector(svector, integer, boolean) AS IMPLICIT;
|
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|
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CREATE CAST (svector AS vector)
|
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WITH FUNCTION svector_to_vector(svector, integer, boolean) AS IMPLICIT;
|
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|
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CREATE CAST (vector AS svector)
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WITH FUNCTION vector_to_svector(vector, integer, boolean) AS IMPLICIT;
|
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|
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-- svector operators
|
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|
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CREATE OPERATOR <-> (
|
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LEFTARG = svector, RIGHTARG = svector, PROCEDURE = l2_distance,
|
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COMMUTATOR = '<->'
|
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);
|
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|
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CREATE OPERATOR <#> (
|
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LEFTARG = svector, RIGHTARG = svector, PROCEDURE = svector_negative_inner_product,
|
||||
COMMUTATOR = '<#>'
|
||||
);
|
||||
|
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CREATE OPERATOR <=> (
|
||||
LEFTARG = svector, RIGHTARG = svector, PROCEDURE = cosine_distance,
|
||||
COMMUTATOR = '<=>'
|
||||
);
|
||||
|
||||
32
src/hnsw.c
32
src/hnsw.c
@@ -167,7 +167,7 @@ hnswhandler(PG_FUNCTION_ARGS)
|
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IndexAmRoutine *amroutine = makeNode(IndexAmRoutine);
|
||||
|
||||
amroutine->amstrategies = 0;
|
||||
amroutine->amsupport = 3;
|
||||
amroutine->amsupport = 2;
|
||||
#if PG_VERSION_NUM >= 130000
|
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amroutine->amoptsprocnum = 0;
|
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#endif
|
||||
@@ -175,7 +175,7 @@ hnswhandler(PG_FUNCTION_ARGS)
|
||||
amroutine->amcanorderbyop = true;
|
||||
amroutine->amcanbackward = false; /* can change direction mid-scan */
|
||||
amroutine->amcanunique = false;
|
||||
amroutine->amcanmulticol = true;
|
||||
amroutine->amcanmulticol = false;
|
||||
amroutine->amoptionalkey = true;
|
||||
amroutine->amsearcharray = false;
|
||||
amroutine->amsearchnulls = false;
|
||||
@@ -222,31 +222,3 @@ hnswhandler(PG_FUNCTION_ARGS)
|
||||
|
||||
PG_RETURN_POINTER(amroutine);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the distance between two int4 attributes
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(hnsw_int4_attribute_distance);
|
||||
Datum
|
||||
hnsw_int4_attribute_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
int32 a = PG_GETARG_INT32(0);
|
||||
int32 b = PG_GETARG_INT32(1);
|
||||
double distance = ((double) a) - ((double) b);
|
||||
|
||||
PG_RETURN_FLOAT8(distance);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the distance between two int8 attributes
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(hnsw_int8_attribute_distance);
|
||||
Datum
|
||||
hnsw_int8_attribute_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
int64 a = PG_GETARG_INT64(0);
|
||||
int64 b = PG_GETARG_INT64(1);
|
||||
double distance = ((double) a) - ((double) b);
|
||||
|
||||
PG_RETURN_FLOAT8(distance);
|
||||
}
|
||||
|
||||
43
src/hnsw.h
43
src/hnsw.h
@@ -19,7 +19,6 @@
|
||||
/* Support functions */
|
||||
#define HNSW_DISTANCE_PROC 1
|
||||
#define HNSW_NORM_PROC 2
|
||||
#define HNSW_ATTRIBUTE_DISTANCE_PROC 3
|
||||
|
||||
#define HNSW_VERSION 1
|
||||
#define HNSW_MAGIC_NUMBER 0xA953A953
|
||||
@@ -60,7 +59,7 @@
|
||||
|
||||
#define HNSW_MAX_SIZE (BLCKSZ - MAXALIGN(SizeOfPageHeaderData) - MAXALIGN(sizeof(HnswPageOpaqueData)) - sizeof(ItemIdData))
|
||||
|
||||
#define HNSW_ELEMENT_TUPLE_SIZE(size) MAXALIGN(offsetof(HnswElementTupleData, data) + (size))
|
||||
#define HNSW_ELEMENT_TUPLE_SIZE(_dim) MAXALIGN(offsetof(HnswElementTupleData, vec) + VECTOR_SIZE(_dim))
|
||||
#define HNSW_NEIGHBOR_TUPLE_SIZE(level, m) MAXALIGN(offsetof(HnswNeighborTupleData, indextids) + ((level) + 2) * (m) * sizeof(ItemPointerData))
|
||||
|
||||
#define HnswPageGetOpaque(page) ((HnswPageOpaque) PageGetSpecialPointer(page))
|
||||
@@ -104,8 +103,7 @@ typedef struct HnswElementData
|
||||
OffsetNumber offno;
|
||||
OffsetNumber neighborOffno;
|
||||
BlockNumber neighborPage;
|
||||
Datum value;
|
||||
IndexTuple itup;
|
||||
Vector *vec;
|
||||
} HnswElementData;
|
||||
|
||||
typedef HnswElementData * HnswElement;
|
||||
@@ -156,18 +154,17 @@ typedef struct HnswBuildState
|
||||
double reltuples;
|
||||
|
||||
/* Support functions */
|
||||
FmgrInfo **procinfos;
|
||||
FmgrInfo *procinfo;
|
||||
FmgrInfo *normprocinfo;
|
||||
Oid *collations;
|
||||
Oid collation;
|
||||
|
||||
/* Variables */
|
||||
List *elements;
|
||||
HnswElement entryPoint;
|
||||
double ml;
|
||||
int maxLevel;
|
||||
long memoryLeft;
|
||||
double maxInMemoryElements;
|
||||
bool flushed;
|
||||
bool useIndexTuple;
|
||||
Vector *normvec;
|
||||
|
||||
/* Memory */
|
||||
@@ -207,7 +204,7 @@ typedef struct HnswElementTupleData
|
||||
ItemPointerData heaptids[HNSW_HEAPTIDS];
|
||||
ItemPointerData neighbortid;
|
||||
uint16 unused2;
|
||||
Vector data;
|
||||
Vector vec;
|
||||
} HnswElementTupleData;
|
||||
|
||||
typedef HnswElementTupleData * HnswElementTuple;
|
||||
@@ -229,9 +226,9 @@ typedef struct HnswScanOpaqueData
|
||||
MemoryContext tmpCtx;
|
||||
|
||||
/* Support functions */
|
||||
FmgrInfo **procinfos;
|
||||
FmgrInfo *procinfo;
|
||||
FmgrInfo *normprocinfo;
|
||||
Oid *collations;
|
||||
Oid collation;
|
||||
} HnswScanOpaqueData;
|
||||
|
||||
typedef HnswScanOpaqueData * HnswScanOpaque;
|
||||
@@ -249,8 +246,8 @@ typedef struct HnswVacuumState
|
||||
int efConstruction;
|
||||
|
||||
/* Support functions */
|
||||
FmgrInfo **procinfos;
|
||||
Oid *collations;
|
||||
FmgrInfo *procinfo;
|
||||
Oid collation;
|
||||
|
||||
/* Variables */
|
||||
HTAB *deleted;
|
||||
@@ -272,27 +269,26 @@ Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
|
||||
void HnswInitPage(Buffer buf, Page page);
|
||||
void HnswInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogState **state);
|
||||
void HnswInit(void);
|
||||
List *HnswSearchLayer(Datum q, IndexTuple qtup, ScanKeyData *keyData, List *ep, int ef, int lc, Relation index, FmgrInfo **procinfos, Oid *collations, int m, bool loadVec, HnswElement skipElement, bool inMemory);
|
||||
List *HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
|
||||
HnswElement HnswGetEntryPoint(Relation index);
|
||||
void HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint);
|
||||
HnswElement HnswInitElement(ItemPointer tid, int m, double ml, int maxLevel);
|
||||
void HnswFreeElement(HnswElement element);
|
||||
HnswElement HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno);
|
||||
void HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, FmgrInfo **procinfos, Oid *collations, int m, int efConstruction, bool existing, bool inMemory);
|
||||
HnswElement HnswFindDuplicate(HnswElement e, Relation index);
|
||||
HnswCandidate *HnswEntryCandidate(HnswElement em, Datum q, IndexTuple qtup, ScanKeyData *keyData, Relation rel, FmgrInfo **procinfos, Oid *collations, bool loadVec, bool inMemory);
|
||||
void HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, FmgrInfo *procinfo, Oid collation, int m, int efConstruction, bool existing);
|
||||
HnswElement HnswFindDuplicate(HnswElement e);
|
||||
HnswCandidate *HnswEntryCandidate(HnswElement em, Datum q, Relation rel, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
||||
void HnswUpdateMetaPage(Relation index, int updateEntry, HnswElement entryPoint, BlockNumber insertPage, ForkNumber forkNum);
|
||||
void HnswSetNeighborTuple(HnswNeighborTuple ntup, HnswElement e, int m);
|
||||
void HnswAddHeapTid(HnswElement element, ItemPointer heaptid);
|
||||
void HnswInitNeighbors(HnswElement element, int m);
|
||||
bool HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel);
|
||||
void HnswUpdateNeighborPages(Relation index, FmgrInfo **procinfos, Oid *collations, HnswElement e, int m, bool checkExisting);
|
||||
void HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec, Relation index);
|
||||
void HnswLoadElement(HnswElement element, float *distance, Datum *q, IndexTuple qtup, ScanKeyData *keyData, Relation index, FmgrInfo **procinfos, Oid *collations, bool loadVec);
|
||||
void HnswSetElementTuple(HnswElementTuple etup, HnswElement element, bool useIndexTuple);
|
||||
void HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo **procinfos, Oid *collations, bool inMemory);
|
||||
void HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting);
|
||||
void HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec);
|
||||
void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
||||
void HnswSetElementTuple(HnswElementTuple etup, HnswElement element);
|
||||
void HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
|
||||
void HnswLoadNeighbors(HnswElement element, Relation index, int m);
|
||||
void HnswElementSetData(HnswElement element, Relation index, Datum value, Datum *values, bool *isnull);
|
||||
|
||||
/* Index access methods */
|
||||
IndexBuildResult *hnswbuild(Relation heap, Relation index, IndexInfo *indexInfo);
|
||||
@@ -309,6 +305,5 @@ IndexScanDesc hnswbeginscan(Relation index, int nkeys, int norderbys);
|
||||
void hnswrescan(IndexScanDesc scan, ScanKey keys, int nkeys, ScanKey orderbys, int norderbys);
|
||||
bool hnswgettuple(IndexScanDesc scan, ScanDirection dir);
|
||||
void hnswendscan(IndexScanDesc scan);
|
||||
FmgrInfo **HnswInitProcinfos(Relation index);
|
||||
|
||||
#endif
|
||||
|
||||
103
src/hnswbuild.c
103
src/hnswbuild.c
@@ -8,7 +8,6 @@
|
||||
#include "lib/pairingheap.h"
|
||||
#include "nodes/pg_list.h"
|
||||
#include "storage/bufmgr.h"
|
||||
#include "utils/datum.h"
|
||||
#include "utils/memutils.h"
|
||||
|
||||
#if PG_VERSION_NUM >= 140000
|
||||
@@ -106,8 +105,8 @@ CreateElementPages(HnswBuildState * buildstate)
|
||||
{
|
||||
Relation index = buildstate->index;
|
||||
ForkNumber forkNum = buildstate->forkNum;
|
||||
bool useIndexTuple = buildstate->useIndexTuple;
|
||||
Size etupAllocSize;
|
||||
int dimensions = buildstate->dimensions;
|
||||
Size etupSize;
|
||||
Size maxSize;
|
||||
HnswElementTuple etup;
|
||||
HnswNeighborTuple ntup;
|
||||
@@ -118,11 +117,11 @@ CreateElementPages(HnswBuildState * buildstate)
|
||||
ListCell *lc;
|
||||
|
||||
/* Calculate sizes */
|
||||
etupAllocSize = BLCKSZ;
|
||||
maxSize = HNSW_MAX_SIZE;
|
||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions);
|
||||
|
||||
/* Allocate once */
|
||||
etup = palloc0(etupAllocSize);
|
||||
etup = palloc0(etupSize);
|
||||
ntup = palloc0(BLCKSZ);
|
||||
|
||||
/* Prepare first page */
|
||||
@@ -134,24 +133,15 @@ CreateElementPages(HnswBuildState * buildstate)
|
||||
foreach(lc, buildstate->elements)
|
||||
{
|
||||
HnswElement element = lfirst(lc);
|
||||
Size etupSize;
|
||||
Size ntupSize;
|
||||
Size combinedSize;
|
||||
|
||||
/* Zero memory for each element */
|
||||
MemSet(etup, 0, etupAllocSize);
|
||||
HnswSetElementTuple(etup, element);
|
||||
|
||||
/* Calculate sizes */
|
||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(useIndexTuple ? IndexTupleSize(element->itup) : VARSIZE_ANY(DatumGetPointer(element->value)));
|
||||
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, buildstate->m);
|
||||
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
|
||||
|
||||
/* Initial size check */
|
||||
if (etupSize > etupAllocSize)
|
||||
elog(ERROR, "index tuple too large");
|
||||
|
||||
HnswSetElementTuple(etup, element, useIndexTuple);
|
||||
|
||||
/* Keep element and neighbors on the same page if possible */
|
||||
if (PageGetFreeSpace(page) < etupSize || (combinedSize <= maxSize && PageGetFreeSpace(page) < combinedSize))
|
||||
HnswBuildAppendPage(index, &buf, &page, &state, forkNum);
|
||||
@@ -274,15 +264,13 @@ FlushPages(HnswBuildState * buildstate)
|
||||
* Insert tuple
|
||||
*/
|
||||
static bool
|
||||
InsertTuple(Relation index, Datum *values, bool *isnull, HnswElement element, HnswBuildState * buildstate, HnswElement * dup, MemoryContext outerCtx)
|
||||
InsertTuple(Relation index, Datum *values, HnswElement element, HnswBuildState * buildstate, HnswElement * dup)
|
||||
{
|
||||
FmgrInfo **procinfos = buildstate->procinfos;
|
||||
Oid *collations = buildstate->collations;
|
||||
FmgrInfo *procinfo = buildstate->procinfo;
|
||||
Oid collation = buildstate->collation;
|
||||
HnswElement entryPoint = buildstate->entryPoint;
|
||||
int efConstruction = buildstate->efConstruction;
|
||||
int m = buildstate->m;
|
||||
bool inMemory = true;
|
||||
MemoryContext oldCtx;
|
||||
|
||||
/* Detoast once for all calls */
|
||||
Datum value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
|
||||
@@ -290,20 +278,18 @@ InsertTuple(Relation index, Datum *values, bool *isnull, HnswElement element, Hn
|
||||
/* Normalize if needed */
|
||||
if (buildstate->normprocinfo != NULL)
|
||||
{
|
||||
if (!HnswNormValue(buildstate->normprocinfo, collations[0], &value, buildstate->normvec))
|
||||
if (!HnswNormValue(buildstate->normprocinfo, collation, &value, buildstate->normvec))
|
||||
return false;
|
||||
}
|
||||
|
||||
/* Copy value to element so accessible outside of memory context */
|
||||
oldCtx = MemoryContextSwitchTo(outerCtx);
|
||||
HnswElementSetData(element, index, value, values, isnull);
|
||||
MemoryContextSwitchTo(oldCtx);
|
||||
memcpy(element->vec, DatumGetVector(value), VECTOR_SIZE(buildstate->dimensions));
|
||||
|
||||
/* Insert element in graph */
|
||||
HnswInsertElement(element, entryPoint, index, procinfos, collations, m, efConstruction, false, inMemory);
|
||||
HnswInsertElement(element, entryPoint, NULL, procinfo, collation, m, efConstruction, false);
|
||||
|
||||
/* Look for duplicate */
|
||||
*dup = HnswFindDuplicate(element, index);
|
||||
*dup = HnswFindDuplicate(element);
|
||||
|
||||
/* Update neighbors if needed */
|
||||
if (*dup == NULL)
|
||||
@@ -314,7 +300,7 @@ InsertTuple(Relation index, Datum *values, bool *isnull, HnswElement element, Hn
|
||||
HnswNeighborArray *neighbors = &element->neighbors[lc];
|
||||
|
||||
for (int i = 0; i < neighbors->length; i++)
|
||||
HnswUpdateConnection(element, &neighbors->items[i], lm, lc, NULL, index, procinfos, collations, inMemory);
|
||||
HnswUpdateConnection(element, &neighbors->items[i], lm, lc, NULL, NULL, procinfo, collation);
|
||||
}
|
||||
}
|
||||
|
||||
@@ -327,21 +313,6 @@ InsertTuple(Relation index, Datum *values, bool *isnull, HnswElement element, Hn
|
||||
return *dup == NULL;
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the memory used by an element
|
||||
*/
|
||||
static long
|
||||
HnswElementMemory(HnswElement e, int m)
|
||||
{
|
||||
long elementSize = sizeof(HnswElementData);
|
||||
|
||||
elementSize += sizeof(HnswNeighborArray) * (e->level + 1);
|
||||
elementSize += sizeof(HnswCandidate) * (m * (e->level + 2));
|
||||
elementSize += sizeof(ItemPointerData);
|
||||
elementSize += IndexTupleSize(e->itup);
|
||||
return elementSize;
|
||||
}
|
||||
|
||||
/*
|
||||
* Callback for table_index_build_scan
|
||||
*/
|
||||
@@ -363,7 +334,7 @@ BuildCallback(Relation index, CALLBACK_ITEM_POINTER, Datum *values,
|
||||
if (isnull[0])
|
||||
return;
|
||||
|
||||
if (buildstate->memoryLeft <= 0)
|
||||
if (buildstate->indtuples >= buildstate->maxInMemoryElements)
|
||||
{
|
||||
if (!buildstate->flushed)
|
||||
{
|
||||
@@ -389,12 +360,13 @@ BuildCallback(Relation index, CALLBACK_ITEM_POINTER, Datum *values,
|
||||
|
||||
/* Allocate necessary memory outside of memory context */
|
||||
element = HnswInitElement(tid, buildstate->m, buildstate->ml, buildstate->maxLevel);
|
||||
element->vec = palloc(VECTOR_SIZE(buildstate->dimensions));
|
||||
|
||||
/* Use memory context since detoast can allocate */
|
||||
oldCtx = MemoryContextSwitchTo(buildstate->tmpCtx);
|
||||
|
||||
/* Insert tuple */
|
||||
inserted = InsertTuple(index, values, isnull, element, buildstate, &dup, oldCtx);
|
||||
inserted = InsertTuple(index, values, element, buildstate, &dup);
|
||||
|
||||
/* Reset memory context */
|
||||
MemoryContextSwitchTo(oldCtx);
|
||||
@@ -402,21 +374,31 @@ BuildCallback(Relation index, CALLBACK_ITEM_POINTER, Datum *values,
|
||||
|
||||
/* Add outside memory context */
|
||||
if (dup != NULL)
|
||||
{
|
||||
HnswAddHeapTid(dup, tid);
|
||||
buildstate->memoryLeft -= sizeof(ItemPointerData);
|
||||
}
|
||||
|
||||
/* Add to buildstate or free */
|
||||
if (inserted)
|
||||
{
|
||||
buildstate->elements = lappend(buildstate->elements, element);
|
||||
buildstate->memoryLeft -= HnswElementMemory(element, buildstate->m);
|
||||
}
|
||||
else
|
||||
HnswFreeElement(element);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the max number of elements that fit into maintenance_work_mem
|
||||
*/
|
||||
static double
|
||||
HnswGetMaxInMemoryElements(int m, double ml, int dimensions)
|
||||
{
|
||||
Size elementSize = sizeof(HnswElementData);
|
||||
double avgLevel = -log(0.5) * ml;
|
||||
|
||||
elementSize += sizeof(HnswNeighborArray) * (avgLevel + 1);
|
||||
elementSize += sizeof(HnswCandidate) * (m * (avgLevel + 2));
|
||||
elementSize += sizeof(ItemPointerData);
|
||||
elementSize += VECTOR_SIZE(dimensions);
|
||||
return (maintenance_work_mem * 1024L) / elementSize;
|
||||
}
|
||||
|
||||
/*
|
||||
* Initialize the build state
|
||||
*/
|
||||
@@ -432,19 +414,6 @@ InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, Index
|
||||
buildstate->efConstruction = HnswGetEfConstruction(index);
|
||||
buildstate->dimensions = TupleDescAttr(index->rd_att, 0)->atttypmod;
|
||||
|
||||
/* TODO See if needed */
|
||||
if (IndexRelationGetNumberOfKeyAttributes(index) > 2)
|
||||
elog(ERROR, "index cannot have more than two columns");
|
||||
|
||||
if (!OidIsValid(index_getprocid(index, 1, HNSW_DISTANCE_PROC)))
|
||||
elog(ERROR, "first column must be a vector");
|
||||
|
||||
for (int i = 1; i < IndexRelationGetNumberOfKeyAttributes(index); i++)
|
||||
{
|
||||
if (!OidIsValid(index_getprocid(index, i + 1, HNSW_ATTRIBUTE_DISTANCE_PROC)))
|
||||
elog(ERROR, "column %d cannot be a vector", i + 1);
|
||||
}
|
||||
|
||||
/* Require column to have dimensions to be indexed */
|
||||
if (buildstate->dimensions < 0)
|
||||
elog(ERROR, "column does not have dimensions");
|
||||
@@ -459,17 +428,16 @@ InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, Index
|
||||
buildstate->indtuples = 0;
|
||||
|
||||
/* Get support functions */
|
||||
buildstate->procinfos = HnswInitProcinfos(index);
|
||||
buildstate->procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||
buildstate->normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC);
|
||||
buildstate->collations = index->rd_indcollation;
|
||||
buildstate->collation = index->rd_indcollation[0];
|
||||
|
||||
buildstate->elements = NIL;
|
||||
buildstate->entryPoint = NULL;
|
||||
buildstate->ml = HnswGetMl(buildstate->m);
|
||||
buildstate->maxLevel = HnswGetMaxLevel(buildstate->m);
|
||||
buildstate->memoryLeft = maintenance_work_mem * 1024L;
|
||||
buildstate->maxInMemoryElements = HnswGetMaxInMemoryElements(buildstate->m, buildstate->ml, buildstate->dimensions);
|
||||
buildstate->flushed = false;
|
||||
buildstate->useIndexTuple = IndexRelationGetNumberOfAttributes(index) > 1;
|
||||
|
||||
/* Reuse for each tuple */
|
||||
buildstate->normvec = InitVector(buildstate->dimensions);
|
||||
@@ -485,7 +453,6 @@ InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, Index
|
||||
static void
|
||||
FreeBuildState(HnswBuildState * buildstate)
|
||||
{
|
||||
pfree(buildstate->procinfos);
|
||||
pfree(buildstate->normvec);
|
||||
MemoryContextDelete(buildstate->tmpCtx);
|
||||
}
|
||||
|
||||
@@ -123,16 +123,16 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
Size minCombinedSize;
|
||||
HnswElementTuple etup;
|
||||
BlockNumber currentPage = insertPage;
|
||||
int dimensions = e->vec->dim;
|
||||
HnswNeighborTuple ntup;
|
||||
Buffer nbuf;
|
||||
Page npage;
|
||||
OffsetNumber freeOffno = InvalidOffsetNumber;
|
||||
OffsetNumber freeNeighborOffno = InvalidOffsetNumber;
|
||||
BlockNumber newInsertPage = InvalidBlockNumber;
|
||||
bool useIndexTuple = IndexRelationGetNumberOfAttributes(index) > 1;
|
||||
|
||||
/* Calculate sizes */
|
||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(useIndexTuple ? IndexTupleSize(e->itup) : VARSIZE_ANY(DatumGetPointer(e->value)));
|
||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(dimensions);
|
||||
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(e->level, m);
|
||||
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
|
||||
maxSize = HNSW_MAX_SIZE;
|
||||
@@ -140,7 +140,7 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
||||
|
||||
/* Prepare element tuple */
|
||||
etup = palloc0(etupSize);
|
||||
HnswSetElementTuple(etup, e, useIndexTuple);
|
||||
HnswSetElementTuple(etup, e);
|
||||
|
||||
/* Prepare neighbor tuple */
|
||||
ntup = palloc0(ntupSize);
|
||||
@@ -302,7 +302,7 @@ ConnectionExists(HnswElement e, HnswNeighborTuple ntup, int startIdx, int lm)
|
||||
* Update neighbors
|
||||
*/
|
||||
void
|
||||
HnswUpdateNeighborPages(Relation index, FmgrInfo **procinfos, Oid *collations, HnswElement e, int m, bool checkExisting)
|
||||
HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement e, int m, bool checkExisting)
|
||||
{
|
||||
for (int lc = e->level; lc >= 0; lc--)
|
||||
{
|
||||
@@ -334,7 +334,7 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo **procinfos, Oid *collations, H
|
||||
*/
|
||||
|
||||
/* Select neighbors */
|
||||
HnswUpdateConnection(e, hc, lm, lc, &idx, index, procinfos, collations, false);
|
||||
HnswUpdateConnection(e, hc, lm, lc, &idx, index, procinfo, collation);
|
||||
|
||||
/* New element was not selected as a neighbor */
|
||||
if (idx == -1)
|
||||
@@ -405,9 +405,8 @@ HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
|
||||
Buffer buf;
|
||||
Page page;
|
||||
GenericXLogState *state;
|
||||
ItemId itemid;
|
||||
Size etupSize = HNSW_ELEMENT_TUPLE_SIZE(dup->vec->dim);
|
||||
HnswElementTuple etup;
|
||||
Size etupSize;
|
||||
int i;
|
||||
|
||||
/* Read page */
|
||||
@@ -417,9 +416,7 @@ HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
|
||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||
|
||||
/* Find space */
|
||||
itemid = PageGetItemId(page, dup->offno);
|
||||
etup = (HnswElementTuple) PageGetItem(page, itemid);
|
||||
etupSize = ItemIdGetLength(itemid);
|
||||
etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, dup->offno));
|
||||
for (i = 0; i < HNSW_HEAPTIDS; i++)
|
||||
{
|
||||
if (!ItemPointerIsValid(&etup->heaptids[i]))
|
||||
@@ -452,7 +449,7 @@ HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
|
||||
* Write changes to disk
|
||||
*/
|
||||
static void
|
||||
WriteElement(Relation index, FmgrInfo **procinfos, Oid *collations, HnswElement element, int m, int efConstruction, HnswElement dup, HnswElement entryPoint)
|
||||
WriteElement(Relation index, FmgrInfo *procinfo, Oid collation, HnswElement element, int m, int efConstruction, HnswElement dup, HnswElement entryPoint)
|
||||
{
|
||||
BlockNumber newInsertPage = InvalidBlockNumber;
|
||||
|
||||
@@ -471,7 +468,7 @@ WriteElement(Relation index, FmgrInfo **procinfos, Oid *collations, HnswElement
|
||||
HnswUpdateMetaPage(index, 0, NULL, newInsertPage, MAIN_FORKNUM);
|
||||
|
||||
/* Update neighbors */
|
||||
HnswUpdateNeighborPages(index, procinfos, collations, element, m, false);
|
||||
HnswUpdateNeighborPages(index, procinfo, collation, element, m, false);
|
||||
|
||||
/* Update metapage if needed */
|
||||
if (entryPoint == NULL || element->level > entryPoint->level)
|
||||
@@ -490,8 +487,8 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
||||
HnswElement element;
|
||||
int m;
|
||||
int efConstruction = HnswGetEfConstruction(index);
|
||||
FmgrInfo **procinfos = HnswInitProcinfos(index);
|
||||
Oid *collations = index->rd_indcollation;
|
||||
FmgrInfo *procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||
Oid collation = index->rd_indcollation[0];
|
||||
HnswElement dup;
|
||||
LOCKMODE lockmode = ShareLock;
|
||||
|
||||
@@ -502,7 +499,7 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
||||
normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC);
|
||||
if (normprocinfo != NULL)
|
||||
{
|
||||
if (!HnswNormValue(normprocinfo, collations[0], &value, NULL))
|
||||
if (!HnswNormValue(normprocinfo, collation, &value, NULL))
|
||||
return false;
|
||||
}
|
||||
|
||||
@@ -518,7 +515,7 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
||||
|
||||
/* Create an element */
|
||||
element = HnswInitElement(heap_tid, m, HnswGetMl(m), HnswGetMaxLevel(m));
|
||||
HnswElementSetData(element, index, value, values, isnull);
|
||||
element->vec = DatumGetVector(value);
|
||||
|
||||
/* Prevent concurrent inserts when likely updating entry point */
|
||||
if (entryPoint == NULL || element->level > entryPoint->level)
|
||||
@@ -535,13 +532,13 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
||||
}
|
||||
|
||||
/* Insert element in graph */
|
||||
HnswInsertElement(element, entryPoint, index, procinfos, collations, m, efConstruction, false, false);
|
||||
HnswInsertElement(element, entryPoint, index, procinfo, collation, m, efConstruction, false);
|
||||
|
||||
/* Look for duplicate */
|
||||
dup = HnswFindDuplicate(element, index);
|
||||
dup = HnswFindDuplicate(element);
|
||||
|
||||
/* Write to disk */
|
||||
WriteElement(index, procinfos, collations, element, m, efConstruction, dup, entryPoint);
|
||||
WriteElement(index, procinfo, collation, element, m, efConstruction, dup, entryPoint);
|
||||
|
||||
/* Release lock */
|
||||
UnlockPage(index, HNSW_UPDATE_LOCK, lockmode);
|
||||
|
||||
@@ -15,13 +15,12 @@ GetScanItems(IndexScanDesc scan, Datum q)
|
||||
{
|
||||
HnswScanOpaque so = (HnswScanOpaque) scan->opaque;
|
||||
Relation index = scan->indexRelation;
|
||||
FmgrInfo **procinfos = so->procinfos;
|
||||
Oid *collations = so->collations;
|
||||
FmgrInfo *procinfo = so->procinfo;
|
||||
Oid collation = so->collation;
|
||||
List *ep;
|
||||
List *w;
|
||||
int m;
|
||||
HnswElement entryPoint;
|
||||
ScanKeyData *keyData = scan->keyData;
|
||||
|
||||
/* Get m and entry point */
|
||||
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
||||
@@ -29,15 +28,15 @@ GetScanItems(IndexScanDesc scan, Datum q)
|
||||
if (entryPoint == NULL)
|
||||
return NIL;
|
||||
|
||||
ep = list_make1(HnswEntryCandidate(entryPoint, q, NULL, keyData, index, procinfos, collations, false, false));
|
||||
ep = list_make1(HnswEntryCandidate(entryPoint, q, index, procinfo, collation, false));
|
||||
|
||||
for (int lc = entryPoint->level; lc >= 1; lc--)
|
||||
{
|
||||
w = HnswSearchLayer(q, NULL, keyData, ep, 1, lc, index, procinfos, collations, m, false, NULL, false);
|
||||
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, m, false, NULL);
|
||||
ep = w;
|
||||
}
|
||||
|
||||
return HnswSearchLayer(q, NULL, keyData, ep, hnsw_ef_search, 0, index, procinfos, collations, m, false, NULL, false);
|
||||
return HnswSearchLayer(q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -84,7 +83,7 @@ GetScanValue(IndexScanDesc scan)
|
||||
|
||||
/* Fine if normalization fails */
|
||||
if (so->normprocinfo != NULL)
|
||||
HnswNormValue(so->normprocinfo, so->collations[0], &value, NULL);
|
||||
HnswNormValue(so->normprocinfo, so->collation, &value, NULL);
|
||||
}
|
||||
|
||||
return value;
|
||||
@@ -108,9 +107,9 @@ hnswbeginscan(Relation index, int nkeys, int norderbys)
|
||||
ALLOCSET_DEFAULT_SIZES);
|
||||
|
||||
/* Set support functions */
|
||||
so->procinfos = HnswInitProcinfos(index);
|
||||
so->procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||
so->normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC);
|
||||
so->collations = index->rd_indcollation;
|
||||
so->collation = index->rd_indcollation[0];
|
||||
|
||||
scan->opaque = so;
|
||||
|
||||
@@ -207,9 +206,6 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
|
||||
scan->xs_ctup.t_self = *heaptid;
|
||||
#endif
|
||||
|
||||
/* TODO Check during scan */
|
||||
scan->xs_recheck = scan->numberOfKeys > 0;
|
||||
|
||||
scan->xs_recheckorderby = false;
|
||||
return true;
|
||||
}
|
||||
@@ -226,7 +222,6 @@ hnswendscan(IndexScanDesc scan)
|
||||
{
|
||||
HnswScanOpaque so = (HnswScanOpaque) scan->opaque;
|
||||
|
||||
pfree(so->procinfos);
|
||||
MemoryContextDelete(so->tmpCtx);
|
||||
|
||||
pfree(so);
|
||||
|
||||
285
src/hnswutils.c
285
src/hnswutils.c
@@ -4,13 +4,8 @@
|
||||
|
||||
#include "hnsw.h"
|
||||
#include "storage/bufmgr.h"
|
||||
#include "utils/datum.h"
|
||||
#include "vector.h"
|
||||
|
||||
#if PG_VERSION_NUM < 130000
|
||||
#define TYPSTORAGE_PLAIN 'p'
|
||||
#endif
|
||||
|
||||
/*
|
||||
* Get the max number of connections in an upper layer for each element in the index
|
||||
*/
|
||||
@@ -51,22 +46,6 @@ HnswOptionalProcInfo(Relation index, uint16 procnum)
|
||||
return index_getprocinfo(index, 1, procnum);
|
||||
}
|
||||
|
||||
/*
|
||||
* Init procs
|
||||
*/
|
||||
FmgrInfo **
|
||||
HnswInitProcinfos(Relation index)
|
||||
{
|
||||
int keyAttributes = IndexRelationGetNumberOfKeyAttributes(index);
|
||||
FmgrInfo **procinfos = palloc(keyAttributes * sizeof(FmgrInfo *));
|
||||
|
||||
procinfos[0] = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||
for (int i = 1; i < keyAttributes; i++)
|
||||
procinfos[i] = index_getprocinfo(index, i + 1, HNSW_ATTRIBUTE_DISTANCE_PROC);
|
||||
|
||||
return procinfos;
|
||||
}
|
||||
|
||||
/*
|
||||
* Divide by the norm
|
||||
*
|
||||
@@ -194,7 +173,6 @@ HnswInitElement(ItemPointer heaptid, int m, double ml, int maxLevel)
|
||||
|
||||
element->level = level;
|
||||
element->deleted = 0;
|
||||
element->itup = NULL;
|
||||
|
||||
HnswInitNeighbors(element, m);
|
||||
|
||||
@@ -209,8 +187,7 @@ HnswFreeElement(HnswElement element)
|
||||
{
|
||||
HnswFreeNeighbors(element);
|
||||
list_free_deep(element->heaptids);
|
||||
if (element->itup)
|
||||
pfree(element->itup);
|
||||
pfree(element->vec);
|
||||
pfree(element);
|
||||
}
|
||||
|
||||
@@ -237,8 +214,7 @@ HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno)
|
||||
element->blkno = blkno;
|
||||
element->offno = offno;
|
||||
element->neighbors = NULL;
|
||||
element->value = PointerGetDatum(NULL);
|
||||
element->itup = NULL;
|
||||
element->vec = NULL;
|
||||
return element;
|
||||
}
|
||||
|
||||
@@ -336,7 +312,7 @@ HnswUpdateMetaPage(Relation index, int updateEntry, HnswElement entryPoint, Bloc
|
||||
* Set element tuple, except for neighbor info
|
||||
*/
|
||||
void
|
||||
HnswSetElementTuple(HnswElementTuple etup, HnswElement element, bool useIndexTuple)
|
||||
HnswSetElementTuple(HnswElementTuple etup, HnswElement element)
|
||||
{
|
||||
etup->type = HNSW_ELEMENT_TUPLE_TYPE;
|
||||
etup->level = element->level;
|
||||
@@ -348,11 +324,7 @@ HnswSetElementTuple(HnswElementTuple etup, HnswElement element, bool useIndexTup
|
||||
else
|
||||
ItemPointerSetInvalid(&etup->heaptids[i]);
|
||||
}
|
||||
|
||||
if (useIndexTuple)
|
||||
memcpy(&etup->data, element->itup, IndexTupleSize(element->itup));
|
||||
else
|
||||
memcpy(&etup->data, DatumGetPointer(element->value), VARSIZE_ANY(DatumGetPointer(element->value)));
|
||||
memcpy(&etup->vec, element->vec, VECTOR_SIZE(element->vec->dim));
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -453,7 +425,7 @@ HnswLoadNeighbors(HnswElement element, Relation index, int m)
|
||||
* Load an element from a tuple
|
||||
*/
|
||||
void
|
||||
HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec, Relation index)
|
||||
HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHeaptids, bool loadVec)
|
||||
{
|
||||
element->level = etup->level;
|
||||
element->deleted = etup->deleted;
|
||||
@@ -475,149 +447,16 @@ HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool loadHe
|
||||
|
||||
if (loadVec)
|
||||
{
|
||||
if (IndexRelationGetNumberOfAttributes(index) > 1)
|
||||
{
|
||||
TupleDesc tupdesc = RelationGetDescr(index);
|
||||
bool unused;
|
||||
|
||||
element->itup = CopyIndexTuple((IndexTuple) &etup->data);
|
||||
element->value = index_getattr(element->itup, 1, tupdesc, &unused);
|
||||
}
|
||||
else
|
||||
{
|
||||
Vector *vec = palloc(VARSIZE_ANY(&etup->data));
|
||||
|
||||
memcpy(vec, &etup->data, VARSIZE_ANY(&etup->data));
|
||||
element->value = PointerGetDatum(vec);
|
||||
}
|
||||
element->vec = palloc(VECTOR_SIZE(etup->vec.dim));
|
||||
memcpy(element->vec, &etup->vec, VECTOR_SIZE(etup->vec.dim));
|
||||
}
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the tuple descriptor
|
||||
*/
|
||||
static TupleDesc
|
||||
HnswTupleDesc(Relation index)
|
||||
{
|
||||
TupleDesc tupdesc = CreateTupleDescCopyConstr(RelationGetDescr(index));
|
||||
|
||||
/* Prevent compression */
|
||||
TupleDescAttr(tupdesc, 0)->attstorage = TYPSTORAGE_PLAIN;
|
||||
|
||||
return tupdesc;
|
||||
}
|
||||
|
||||
/*
|
||||
* Set element data
|
||||
*/
|
||||
void
|
||||
HnswElementSetData(HnswElement element, Relation index, Datum value, Datum *values, bool *isnull)
|
||||
{
|
||||
/* TODO Create once per index build */
|
||||
TupleDesc tupdesc = HnswTupleDesc(index);
|
||||
bool unused;
|
||||
Datum tmp;
|
||||
|
||||
tmp = values[0];
|
||||
values[0] = value;
|
||||
element->itup = index_form_tuple(tupdesc, values, isnull);
|
||||
values[0] = tmp;
|
||||
|
||||
element->value = index_getattr(element->itup, 1, tupdesc, &unused);
|
||||
|
||||
FreeTupleDesc(tupdesc);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the attribute distance
|
||||
*/
|
||||
static inline double
|
||||
AttributeDistance(double e)
|
||||
{
|
||||
/* TODO Better bias */
|
||||
/* must be >> max(w * g) + 1 / log10(2) */
|
||||
double bias = 4.32;
|
||||
|
||||
return e > 0 ? bias - 1.0 / log10(e + 1) : 0;
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the distance
|
||||
*/
|
||||
static double
|
||||
GetDistance(IndexTuple itup, Datum vec, Datum q, IndexTuple qtup, ScanKeyData *keyData, Relation index, FmgrInfo **procinfos, Oid *collations)
|
||||
{
|
||||
double g = DatumGetFloat8(FunctionCall2Coll(procinfos[0], collations[0], q, vec));
|
||||
|
||||
if (IndexRelationGetNumberOfKeyAttributes(index) > 1)
|
||||
{
|
||||
double w = 0.25;
|
||||
double e = 0.0;
|
||||
TupleDesc tupdesc = RelationGetDescr(index);
|
||||
|
||||
if (keyData)
|
||||
{
|
||||
/* TODO need to pass length of key data */
|
||||
int keyCount = 1;
|
||||
|
||||
for (int i = 0; i < keyCount; i++)
|
||||
{
|
||||
ScanKey key = &keyData[i];
|
||||
bool isnull;
|
||||
Datum value = index_getattr(itup, key->sk_attno, tupdesc, &isnull);
|
||||
bool attnull = key->sk_flags & SK_ISNULL;
|
||||
|
||||
if (isnull || attnull)
|
||||
{
|
||||
if (isnull != attnull)
|
||||
e += 1000;
|
||||
}
|
||||
else if (!DatumGetBool(FunctionCall2Coll(&key->sk_func, key->sk_collation, value, key->sk_argument)))
|
||||
{
|
||||
double ei = fabs(DatumGetFloat8(FunctionCall2Coll(procinfos[key->sk_attno - 1], collations[key->sk_attno - 1], value, key->sk_argument)));
|
||||
|
||||
if (ei > 0)
|
||||
e += ei;
|
||||
else
|
||||
/* Distance is zero for inequality */
|
||||
e += 1000;
|
||||
}
|
||||
}
|
||||
|
||||
return w * g + AttributeDistance(e);
|
||||
}
|
||||
else if (qtup)
|
||||
{
|
||||
int keyCount = IndexRelationGetNumberOfKeyAttributes(index) - 1;
|
||||
|
||||
for (int i = 0; i < keyCount; i++)
|
||||
{
|
||||
bool isnull;
|
||||
bool attnull;
|
||||
Datum value = index_getattr(itup, i + 2, tupdesc, &isnull);
|
||||
Datum value2 = index_getattr(qtup, i + 2, tupdesc, &attnull);
|
||||
|
||||
if (isnull || attnull)
|
||||
{
|
||||
if (isnull != attnull)
|
||||
e += 1000;
|
||||
}
|
||||
else
|
||||
e += fabs(DatumGetFloat8(FunctionCall2Coll(procinfos[i + 1], collations[i + 1], value, value2)));
|
||||
}
|
||||
|
||||
return w * g + AttributeDistance(e);
|
||||
}
|
||||
}
|
||||
|
||||
return g;
|
||||
}
|
||||
|
||||
/*
|
||||
* Load an element and optionally get its distance from q
|
||||
*/
|
||||
void
|
||||
HnswLoadElement(HnswElement element, float *distance, Datum *q, IndexTuple qtup, ScanKeyData *keyData, Relation index, FmgrInfo **procinfos, Oid *collations, bool loadVec)
|
||||
HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec)
|
||||
{
|
||||
Buffer buf;
|
||||
Page page;
|
||||
@@ -633,27 +472,11 @@ HnswLoadElement(HnswElement element, float *distance, Datum *q, IndexTuple qtup,
|
||||
Assert(HnswIsElementTuple(etup));
|
||||
|
||||
/* Load element */
|
||||
HnswLoadElementFromTuple(element, etup, true, loadVec, index);
|
||||
HnswLoadElementFromTuple(element, etup, true, loadVec);
|
||||
|
||||
/* Calculate distance */
|
||||
if (distance != NULL)
|
||||
{
|
||||
IndexTuple itup = NULL;
|
||||
Datum value;
|
||||
|
||||
if (IndexRelationGetNumberOfAttributes(index) > 1)
|
||||
{
|
||||
TupleDesc tupdesc = RelationGetDescr(index);
|
||||
bool unused;
|
||||
|
||||
itup = (IndexTuple) &etup->data;
|
||||
value = index_getattr(itup, 1, tupdesc, &unused);
|
||||
}
|
||||
else
|
||||
value = PointerGetDatum(&etup->data);
|
||||
|
||||
*distance = GetDistance(itup, value, *q, qtup, keyData, index, procinfos, collations);
|
||||
}
|
||||
*distance = (float) DatumGetFloat8(FunctionCall2Coll(procinfo, collation, *q, PointerGetDatum(&etup->vec)));
|
||||
|
||||
UnlockReleaseBuffer(buf);
|
||||
}
|
||||
@@ -662,24 +485,24 @@ HnswLoadElement(HnswElement element, float *distance, Datum *q, IndexTuple qtup,
|
||||
* Get the distance for a candidate
|
||||
*/
|
||||
static float
|
||||
GetCandidateDistance(HnswCandidate * hc, Datum q, IndexTuple qtup, ScanKeyData *keyData, Relation index, FmgrInfo **procinfos, Oid *collations)
|
||||
GetCandidateDistance(HnswCandidate * hc, Datum q, FmgrInfo *procinfo, Oid collation)
|
||||
{
|
||||
return GetDistance(hc->element->itup, hc->element->value, q, qtup, keyData, index, procinfos, collations);
|
||||
return DatumGetFloat8(FunctionCall2Coll(procinfo, collation, q, PointerGetDatum(hc->element->vec)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Create a candidate for the entry point
|
||||
*/
|
||||
HnswCandidate *
|
||||
HnswEntryCandidate(HnswElement entryPoint, Datum q, IndexTuple qtup, ScanKeyData *keyData, Relation index, FmgrInfo **procinfos, Oid *collations, bool loadVec, bool inMemory)
|
||||
HnswEntryCandidate(HnswElement entryPoint, Datum q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec)
|
||||
{
|
||||
HnswCandidate *hc = palloc(sizeof(HnswCandidate));
|
||||
|
||||
hc->element = entryPoint;
|
||||
if (inMemory)
|
||||
hc->distance = GetCandidateDistance(hc, q, qtup, keyData, index, procinfos, collations);
|
||||
if (index == NULL)
|
||||
hc->distance = GetCandidateDistance(hc, q, procinfo, collation);
|
||||
else
|
||||
HnswLoadElement(hc->element, &hc->distance, &q, qtup, keyData, index, procinfos, collations, loadVec);
|
||||
HnswLoadElement(hc->element, &hc->distance, &q, index, procinfo, collation, loadVec);
|
||||
return hc;
|
||||
}
|
||||
|
||||
@@ -729,9 +552,9 @@ CreatePairingHeapNode(HnswCandidate * c)
|
||||
* Add to visited
|
||||
*/
|
||||
static inline void
|
||||
AddToVisited(HTAB *v, HnswCandidate * hc, bool inMemory, bool *found)
|
||||
AddToVisited(HTAB *v, HnswCandidate * hc, Relation index, bool *found)
|
||||
{
|
||||
if (inMemory)
|
||||
if (index == NULL)
|
||||
hash_search(v, &hc->element, HASH_ENTER, found);
|
||||
else
|
||||
{
|
||||
@@ -746,7 +569,7 @@ AddToVisited(HTAB *v, HnswCandidate * hc, bool inMemory, bool *found)
|
||||
* Algorithm 2 from paper
|
||||
*/
|
||||
List *
|
||||
HnswSearchLayer(Datum q, IndexTuple qtup, ScanKeyData *keyData, List *ep, int ef, int lc, Relation index, FmgrInfo **procinfos, Oid *collations, int m, bool loadVec, HnswElement skipElement, bool inMemory)
|
||||
HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement)
|
||||
{
|
||||
ListCell *lc2;
|
||||
|
||||
@@ -758,7 +581,7 @@ HnswSearchLayer(Datum q, IndexTuple qtup, ScanKeyData *keyData, List *ep, int ef
|
||||
HTAB *v;
|
||||
|
||||
/* Create hash table */
|
||||
if (inMemory)
|
||||
if (index == NULL)
|
||||
{
|
||||
hash_ctl.keysize = sizeof(HnswElement *);
|
||||
hash_ctl.entrysize = sizeof(HnswElement *);
|
||||
@@ -777,7 +600,7 @@ HnswSearchLayer(Datum q, IndexTuple qtup, ScanKeyData *keyData, List *ep, int ef
|
||||
{
|
||||
HnswCandidate *hc = (HnswCandidate *) lfirst(lc2);
|
||||
|
||||
AddToVisited(v, hc, inMemory, NULL);
|
||||
AddToVisited(v, hc, index, NULL);
|
||||
|
||||
pairingheap_add(C, &(CreatePairingHeapNode(hc)->ph_node));
|
||||
pairingheap_add(W, &(CreatePairingHeapNode(hc)->ph_node));
|
||||
@@ -811,7 +634,7 @@ HnswSearchLayer(Datum q, IndexTuple qtup, ScanKeyData *keyData, List *ep, int ef
|
||||
HnswCandidate *e = &neighborhood->items[i];
|
||||
bool visited;
|
||||
|
||||
AddToVisited(v, e, inMemory, &visited);
|
||||
AddToVisited(v, e, index, &visited);
|
||||
|
||||
if (!visited)
|
||||
{
|
||||
@@ -819,10 +642,10 @@ HnswSearchLayer(Datum q, IndexTuple qtup, ScanKeyData *keyData, List *ep, int ef
|
||||
|
||||
f = ((HnswPairingHeapNode *) pairingheap_first(W))->inner;
|
||||
|
||||
if (inMemory)
|
||||
eDistance = GetCandidateDistance(e, q, qtup, keyData, index, procinfos, collations);
|
||||
if (index == NULL)
|
||||
eDistance = GetCandidateDistance(e, q, procinfo, collation);
|
||||
else
|
||||
HnswLoadElement(e->element, &eDistance, &q, qtup, keyData, index, procinfos, collations, loadVec);
|
||||
HnswLoadElement(e->element, &eDistance, &q, index, procinfo, collation, inserting);
|
||||
|
||||
Assert(!e->element->deleted);
|
||||
|
||||
@@ -902,7 +725,7 @@ CompareCandidateDistances(const void *a, const void *b)
|
||||
* Calculate the distance between elements
|
||||
*/
|
||||
static float
|
||||
HnswGetCachedDistance(HnswElement a, HnswElement b, int lc, Relation index, FmgrInfo **procinfos, Oid *collations)
|
||||
HnswGetDistance(HnswElement a, HnswElement b, int lc, FmgrInfo *procinfo, Oid collation)
|
||||
{
|
||||
/* Look for cached distance */
|
||||
if (a->neighbors != NULL)
|
||||
@@ -927,21 +750,21 @@ HnswGetCachedDistance(HnswElement a, HnswElement b, int lc, Relation index, Fmgr
|
||||
}
|
||||
}
|
||||
|
||||
return GetDistance(a->itup, a->value, b->value, b->itup, NULL, index, procinfos, collations);
|
||||
return DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(a->vec), PointerGetDatum(b->vec)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Check if an element is closer to q than any element from R
|
||||
*/
|
||||
static bool
|
||||
CheckElementCloser(HnswCandidate * e, List *r, int lc, Relation index, FmgrInfo **procinfos, Oid *collations)
|
||||
CheckElementCloser(HnswCandidate * e, List *r, int lc, FmgrInfo *procinfo, Oid collation)
|
||||
{
|
||||
ListCell *lc2;
|
||||
|
||||
foreach(lc2, r)
|
||||
{
|
||||
HnswCandidate *ri = lfirst(lc2);
|
||||
float distance = HnswGetCachedDistance(e->element, ri->element, lc, index, procinfos, collations);
|
||||
float distance = HnswGetDistance(e->element, ri->element, lc, procinfo, collation);
|
||||
|
||||
if (distance <= e->distance)
|
||||
return false;
|
||||
@@ -954,7 +777,7 @@ CheckElementCloser(HnswCandidate * e, List *r, int lc, Relation index, FmgrInfo
|
||||
* Algorithm 4 from paper
|
||||
*/
|
||||
static List *
|
||||
SelectNeighbors(List *c, int m, int lc, Relation index, FmgrInfo **procinfos, Oid *collations, HnswElement e2, HnswCandidate * newCandidate, HnswCandidate * *pruned, bool sortCandidates)
|
||||
SelectNeighbors(List *c, int m, int lc, FmgrInfo *procinfo, Oid collation, HnswElement e2, HnswCandidate * newCandidate, HnswCandidate * *pruned, bool sortCandidates)
|
||||
{
|
||||
List *r = NIL;
|
||||
List *w = list_copy(c);
|
||||
@@ -981,7 +804,7 @@ SelectNeighbors(List *c, int m, int lc, Relation index, FmgrInfo **procinfos, Oi
|
||||
|
||||
/* Use previous state of r and wd to skip work when possible */
|
||||
if (mustCalculate)
|
||||
e->closer = CheckElementCloser(e, r, lc, index, procinfos, collations);
|
||||
e->closer = CheckElementCloser(e, r, lc, procinfo, collation);
|
||||
else if (list_length(added) > 0)
|
||||
{
|
||||
/*
|
||||
@@ -990,7 +813,7 @@ SelectNeighbors(List *c, int m, int lc, Relation index, FmgrInfo **procinfos, Oi
|
||||
*/
|
||||
if (e->closer)
|
||||
{
|
||||
e->closer = CheckElementCloser(e, added, lc, index, procinfos, collations);
|
||||
e->closer = CheckElementCloser(e, added, lc, procinfo, collation);
|
||||
|
||||
if (!e->closer)
|
||||
removedAny = true;
|
||||
@@ -1003,7 +826,7 @@ SelectNeighbors(List *c, int m, int lc, Relation index, FmgrInfo **procinfos, Oi
|
||||
*/
|
||||
if (removedAny)
|
||||
{
|
||||
e->closer = CheckElementCloser(e, r, lc, index, procinfos, collations);
|
||||
e->closer = CheckElementCloser(e, r, lc, procinfo, collation);
|
||||
if (e->closer)
|
||||
added = lappend(added, e);
|
||||
}
|
||||
@@ -1011,7 +834,7 @@ SelectNeighbors(List *c, int m, int lc, Relation index, FmgrInfo **procinfos, Oi
|
||||
}
|
||||
else if (e == newCandidate)
|
||||
{
|
||||
e->closer = CheckElementCloser(e, r, lc, index, procinfos, collations);
|
||||
e->closer = CheckElementCloser(e, r, lc, procinfo, collation);
|
||||
if (e->closer)
|
||||
added = lappend(added, e);
|
||||
}
|
||||
@@ -1045,20 +868,16 @@ SelectNeighbors(List *c, int m, int lc, Relation index, FmgrInfo **procinfos, Oi
|
||||
* Find duplicate element
|
||||
*/
|
||||
HnswElement
|
||||
HnswFindDuplicate(HnswElement e, Relation index)
|
||||
HnswFindDuplicate(HnswElement e)
|
||||
{
|
||||
HnswNeighborArray *neighbors = &e->neighbors[0];
|
||||
|
||||
/* TODO Implement */
|
||||
if (IndexRelationGetNumberOfAttributes(index) > 1)
|
||||
return NULL;
|
||||
|
||||
for (int i = 0; i < neighbors->length; i++)
|
||||
{
|
||||
HnswCandidate *neighbor = &neighbors->items[i];
|
||||
|
||||
/* Exit early since ordered by distance */
|
||||
if (!datumIsEqual(e->value, neighbor->element->value, false, -1))
|
||||
if (vector_cmp_internal(e->vec, neighbor->element->vec) != 0)
|
||||
break;
|
||||
|
||||
/* Check for space */
|
||||
@@ -1086,7 +905,7 @@ AddConnections(HnswElement element, List *neighbors, int m, int lc)
|
||||
* Update connections
|
||||
*/
|
||||
void
|
||||
HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo **procinfos, Oid *collations, bool inMemory)
|
||||
HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation)
|
||||
{
|
||||
HnswNeighborArray *currentNeighbors = &hc->element->neighbors[lc];
|
||||
|
||||
@@ -1109,20 +928,18 @@ HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int
|
||||
HnswCandidate *pruned = NULL;
|
||||
|
||||
/* Load elements on insert */
|
||||
if (!inMemory)
|
||||
if (index != NULL)
|
||||
{
|
||||
Datum q = hc->element->value;
|
||||
IndexTuple qtup = hc->element->itup;
|
||||
ScanKeyData *keyData = NULL;
|
||||
Datum q = PointerGetDatum(hc->element->vec);
|
||||
|
||||
for (int i = 0; i < currentNeighbors->length; i++)
|
||||
{
|
||||
HnswCandidate *hc3 = ¤tNeighbors->items[i];
|
||||
|
||||
if (DatumGetPointer(hc3->element->value) == NULL)
|
||||
HnswLoadElement(hc3->element, &hc3->distance, &q, qtup, keyData, index, procinfos, collations, true);
|
||||
if (hc3->element->vec == NULL)
|
||||
HnswLoadElement(hc3->element, &hc3->distance, &q, index, procinfo, collation, true);
|
||||
else
|
||||
hc3->distance = GetCandidateDistance(hc3, q, qtup, keyData, index, procinfos, collations);
|
||||
hc3->distance = GetCandidateDistance(hc3, q, procinfo, collation);
|
||||
|
||||
/* Prune element if being deleted */
|
||||
if (list_length(hc3->element->heaptids) == 0)
|
||||
@@ -1142,7 +959,7 @@ HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int
|
||||
c = lappend(c, ¤tNeighbors->items[i]);
|
||||
c = lappend(c, &hc2);
|
||||
|
||||
SelectNeighbors(c, m, lc, index, procinfos, collations, hc->element, &hc2, &pruned, true);
|
||||
SelectNeighbors(c, m, lc, procinfo, collation, hc->element, &hc2, &pruned, true);
|
||||
|
||||
/* Should not happen */
|
||||
if (pruned == NULL)
|
||||
@@ -1194,15 +1011,13 @@ RemoveElements(List *w, HnswElement skipElement)
|
||||
* Algorithm 1 from paper
|
||||
*/
|
||||
void
|
||||
HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, FmgrInfo **procinfos, Oid *collations, int m, int efConstruction, bool existing, bool inMemory)
|
||||
HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, FmgrInfo *procinfo, Oid collation, int m, int efConstruction, bool existing)
|
||||
{
|
||||
List *ep;
|
||||
List *w;
|
||||
int level = element->level;
|
||||
int entryLevel;
|
||||
Datum q = element->value;
|
||||
IndexTuple qtup = element->itup;
|
||||
ScanKeyData *keyData = NULL;
|
||||
Datum q = PointerGetDatum(element->vec);
|
||||
HnswElement skipElement = existing ? element : NULL;
|
||||
|
||||
/* No neighbors if no entry point */
|
||||
@@ -1210,13 +1025,13 @@ HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, F
|
||||
return;
|
||||
|
||||
/* Get entry point and level */
|
||||
ep = list_make1(HnswEntryCandidate(entryPoint, q, qtup, keyData, index, procinfos, collations, true, inMemory));
|
||||
ep = list_make1(HnswEntryCandidate(entryPoint, q, index, procinfo, collation, true));
|
||||
entryLevel = entryPoint->level;
|
||||
|
||||
/* 1st phase: greedy search to insert level */
|
||||
for (int lc = entryLevel; lc >= level + 1; lc--)
|
||||
{
|
||||
w = HnswSearchLayer(q, qtup, keyData, ep, 1, lc, index, procinfos, collations, m, true, skipElement, inMemory);
|
||||
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, m, true, skipElement);
|
||||
ep = w;
|
||||
}
|
||||
|
||||
@@ -1234,11 +1049,11 @@ HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, F
|
||||
List *neighbors;
|
||||
List *lw;
|
||||
|
||||
w = HnswSearchLayer(q, qtup, keyData, ep, efConstruction, lc, index, procinfos, collations, m, true, skipElement, inMemory);
|
||||
w = HnswSearchLayer(q, ep, efConstruction, lc, index, procinfo, collation, m, true, skipElement);
|
||||
|
||||
/* Elements being deleted or skipped can help with search */
|
||||
/* but should be removed before selecting neighbors */
|
||||
if (!inMemory)
|
||||
if (index != NULL)
|
||||
lw = RemoveElements(w, skipElement);
|
||||
else
|
||||
lw = w;
|
||||
@@ -1248,7 +1063,7 @@ HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, F
|
||||
* sortCandidates to true for in-memory builds to enable closer
|
||||
* caching, but there does not seem to be a difference in performance.
|
||||
*/
|
||||
neighbors = SelectNeighbors(lw, lm, lc, index, procinfos, collations, element, NULL, NULL, false);
|
||||
neighbors = SelectNeighbors(lw, lm, lc, procinfo, collation, element, NULL, NULL, false);
|
||||
|
||||
AddConnections(element, neighbors, lm, lc);
|
||||
|
||||
|
||||
@@ -62,8 +62,7 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
|
||||
/* Iterate over nodes */
|
||||
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||
{
|
||||
ItemId itemid = PageGetItemId(page, offno);
|
||||
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, itemid);
|
||||
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, offno));
|
||||
int idx = 0;
|
||||
bool itemUpdated = false;
|
||||
|
||||
@@ -94,7 +93,7 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
|
||||
|
||||
if (itemUpdated)
|
||||
{
|
||||
Size etupSize = ItemIdGetLength(itemid);
|
||||
Size etupSize = HNSW_ELEMENT_TUPLE_SIZE(etup->vec.dim);
|
||||
|
||||
/* Mark rest as invalid */
|
||||
for (int i = idx; i < HNSW_HEAPTIDS; i++)
|
||||
@@ -195,8 +194,8 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
|
||||
GenericXLogState *state;
|
||||
int m = vacuumstate->m;
|
||||
int efConstruction = vacuumstate->efConstruction;
|
||||
FmgrInfo **procinfos = vacuumstate->procinfos;
|
||||
Oid *collations = vacuumstate->collations;
|
||||
FmgrInfo *procinfo = vacuumstate->procinfo;
|
||||
Oid collation = vacuumstate->collation;
|
||||
BufferAccessStrategy bas = vacuumstate->bas;
|
||||
HnswNeighborTuple ntup = vacuumstate->ntup;
|
||||
Size ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, m);
|
||||
@@ -210,7 +209,7 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
|
||||
element->heaptids = NIL;
|
||||
|
||||
/* Add element to graph, skipping itself */
|
||||
HnswInsertElement(element, entryPoint, index, procinfos, collations, m, efConstruction, true, false);
|
||||
HnswInsertElement(element, entryPoint, index, procinfo, collation, m, efConstruction, true);
|
||||
|
||||
/* Update neighbor tuple */
|
||||
/* Do this before getting page to minimize locking */
|
||||
@@ -231,7 +230,7 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
|
||||
UnlockReleaseBuffer(buf);
|
||||
|
||||
/* Update neighbors */
|
||||
HnswUpdateNeighborPages(index, procinfos, collations, element, m, true);
|
||||
HnswUpdateNeighborPages(index, procinfo, collation, element, m, true);
|
||||
}
|
||||
|
||||
/*
|
||||
@@ -258,7 +257,7 @@ RepairGraphEntryPoint(HnswVacuumState * vacuumstate)
|
||||
LockPage(index, HNSW_UPDATE_LOCK, ShareLock);
|
||||
|
||||
/* Load element */
|
||||
HnswLoadElement(highestPoint, NULL, NULL, NULL, NULL, index, vacuumstate->procinfos, vacuumstate->collations, true);
|
||||
HnswLoadElement(highestPoint, NULL, NULL, index, vacuumstate->procinfo, vacuumstate->collation, true);
|
||||
|
||||
/* Repair if needed */
|
||||
if (NeedsUpdated(vacuumstate, highestPoint))
|
||||
@@ -296,7 +295,7 @@ RepairGraphEntryPoint(HnswVacuumState * vacuumstate)
|
||||
* is outdated, this can remove connections at higher levels in
|
||||
* the graph until they are repaired, but this should be fine.
|
||||
*/
|
||||
HnswLoadElement(entryPoint, NULL, NULL, NULL, NULL, index, vacuumstate->procinfos, vacuumstate->collations, true);
|
||||
HnswLoadElement(entryPoint, NULL, NULL, index, vacuumstate->procinfo, vacuumstate->collation, true);
|
||||
|
||||
if (NeedsUpdated(vacuumstate, entryPoint))
|
||||
{
|
||||
@@ -372,7 +371,7 @@ RepairGraph(HnswVacuumState * vacuumstate)
|
||||
|
||||
/* Create an element */
|
||||
element = HnswInitElementFromBlock(blkno, offno);
|
||||
HnswLoadElementFromTuple(element, etup, false, true, index);
|
||||
HnswLoadElementFromTuple(element, etup, false, true);
|
||||
|
||||
elements = lappend(elements, element);
|
||||
}
|
||||
@@ -442,7 +441,6 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
||||
BlockNumber insertPage = InvalidBlockNumber;
|
||||
Relation index = vacuumstate->index;
|
||||
BufferAccessStrategy bas = vacuumstate->bas;
|
||||
bool useIndexTuple = IndexRelationGetNumberOfAttributes(index);
|
||||
|
||||
/*
|
||||
* Wait for index scans to complete. Scans before this point may contain
|
||||
@@ -479,8 +477,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
||||
/* Update element and neighbors together */
|
||||
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||
{
|
||||
ItemId itemid = PageGetItemId(page, offno);
|
||||
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, itemid);
|
||||
HnswElementTuple etup = (HnswElementTuple) PageGetItem(page, PageGetItemId(page, offno));
|
||||
HnswNeighborTuple ntup;
|
||||
Size etupSize;
|
||||
Size ntupSize;
|
||||
@@ -508,7 +505,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
||||
continue;
|
||||
|
||||
/* Calculate sizes */
|
||||
etupSize = ItemIdGetLength(itemid);
|
||||
etupSize = HNSW_ELEMENT_TUPLE_SIZE(etup->vec.dim);
|
||||
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(etup->level, vacuumstate->m);
|
||||
|
||||
/* Get neighbor page */
|
||||
@@ -531,18 +528,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
||||
|
||||
/* Overwrite element */
|
||||
etup->deleted = 1;
|
||||
if (useIndexTuple)
|
||||
{
|
||||
IndexTuple itup = (IndexTuple) &etup->data;
|
||||
|
||||
MemSet(itup, 0, IndexTupleSize(itup));
|
||||
}
|
||||
else
|
||||
{
|
||||
Vector *vec = (Vector *) (&etup->data);
|
||||
|
||||
MemSet(vec, 0, VARSIZE_ANY(vec));
|
||||
}
|
||||
MemSet(&etup->vec.x, 0, etup->vec.dim * sizeof(float));
|
||||
|
||||
/* Overwrite neighbors */
|
||||
for (int i = 0; i < ntup->count; i++)
|
||||
@@ -598,8 +584,8 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
|
||||
vacuumstate->callback_state = callback_state;
|
||||
vacuumstate->efConstruction = HnswGetEfConstruction(index);
|
||||
vacuumstate->bas = GetAccessStrategy(BAS_BULKREAD);
|
||||
vacuumstate->procinfos = HnswInitProcinfos(index);
|
||||
vacuumstate->collations = index->rd_indcollation;
|
||||
vacuumstate->procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||
vacuumstate->collation = index->rd_indcollation[0];
|
||||
vacuumstate->ntup = palloc0(BLCKSZ);
|
||||
vacuumstate->tmpCtx = AllocSetContextCreate(CurrentMemoryContext,
|
||||
"Hnsw vacuum temporary context",
|
||||
@@ -623,7 +609,6 @@ FreeVacuumState(HnswVacuumState * vacuumstate)
|
||||
{
|
||||
hash_destroy(vacuumstate->deleted);
|
||||
FreeAccessStrategy(vacuumstate->bas);
|
||||
pfree(vacuumstate->procinfos);
|
||||
pfree(vacuumstate->ntup);
|
||||
MemoryContextDelete(vacuumstate->tmpCtx);
|
||||
}
|
||||
|
||||
705
src/svector.c
Normal file
705
src/svector.c
Normal file
@@ -0,0 +1,705 @@
|
||||
#include "postgres.h"
|
||||
|
||||
#include <math.h>
|
||||
|
||||
#include "fmgr.h"
|
||||
#include "libpq/pqformat.h"
|
||||
#include "svector.h"
|
||||
#include "utils/array.h"
|
||||
#include "vector.h"
|
||||
|
||||
#if PG_VERSION_NUM >= 120000
|
||||
#include "common/shortest_dec.h"
|
||||
#include "utils/float.h"
|
||||
#else
|
||||
#include <float.h>
|
||||
#include "utils/builtins.h"
|
||||
#endif
|
||||
|
||||
/*
|
||||
* Ensure same dimensions
|
||||
*/
|
||||
static inline void
|
||||
CheckDims(SVector * a, SVector * b)
|
||||
{
|
||||
if (a->dim != b->dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("different svector dimensions %d and %d", a->dim, b->dim)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure expected dimensions
|
||||
*/
|
||||
static inline void
|
||||
CheckExpectedDim(int32 typmod, int dim)
|
||||
{
|
||||
if (typmod != -1 && typmod != dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("expected %d dimensions, not %d", typmod, dim)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure valid dimensions
|
||||
*/
|
||||
static inline void
|
||||
CheckDim(int dim)
|
||||
{
|
||||
if (dim < 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("svector must have at least 1 dimension")));
|
||||
|
||||
if (dim > SVECTOR_MAX_DIM)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
|
||||
errmsg("svector cannot have more than %d dimensions", SVECTOR_MAX_DIM)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure valid nnz
|
||||
*/
|
||||
static inline void
|
||||
CheckNnz(int nnz, int dim)
|
||||
{
|
||||
if (nnz < 0)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("svector must have at least one element")));
|
||||
|
||||
if (nnz > dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
|
||||
errmsg("svector cannot have more elements than dimensions")));
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure valid index
|
||||
*/
|
||||
static inline void
|
||||
CheckIndex(int32 *indices, int i, int dim)
|
||||
{
|
||||
int32 index = indices[i];
|
||||
|
||||
if (index < 0)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("index must not be negative")));
|
||||
|
||||
if (index >= dim)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("index must be less than dimensions")));
|
||||
|
||||
if (i > 0)
|
||||
{
|
||||
if (index < indices[i - 1])
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("indexes must be in ascending order")));
|
||||
|
||||
if (index == indices[i - 1])
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("indexes must not contain duplicates")));
|
||||
}
|
||||
}
|
||||
|
||||
/*
|
||||
* Ensure finite element
|
||||
*/
|
||||
static inline void
|
||||
CheckElement(float value)
|
||||
{
|
||||
if (isnan(value))
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("NaN not allowed in svector")));
|
||||
|
||||
if (isinf(value))
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("infinite value not allowed in svector")));
|
||||
}
|
||||
|
||||
/*
|
||||
* Allocate and initialize a new sparse vector
|
||||
*/
|
||||
SVector *
|
||||
InitSVector(int dim, int nnz)
|
||||
{
|
||||
SVector *result;
|
||||
int size;
|
||||
|
||||
size = SVECTOR_SIZE(nnz);
|
||||
result = (SVector *) palloc0(size);
|
||||
SET_VARSIZE(result, size);
|
||||
result->dim = dim;
|
||||
result->nnz = nnz;
|
||||
|
||||
return result;
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert textual representation to internal representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_in);
|
||||
Datum
|
||||
svector_in(PG_FUNCTION_ARGS)
|
||||
{
|
||||
char *str = PG_GETARG_CSTRING(0);
|
||||
int32 typmod = PG_GETARG_INT32(2);
|
||||
int dim;
|
||||
char *pt;
|
||||
SVector *result;
|
||||
float *rvalues;
|
||||
char *lit = pstrdup(str);
|
||||
int n;
|
||||
int32 *indices;
|
||||
float *values;
|
||||
int index;
|
||||
float value;
|
||||
int maxNnz;
|
||||
int nnz = 0;
|
||||
|
||||
/* TODO Improve code and checks after deciding on format */
|
||||
|
||||
maxNnz = 1;
|
||||
pt = str;
|
||||
while (*pt != '\0')
|
||||
{
|
||||
if (*pt == ',')
|
||||
maxNnz++;
|
||||
|
||||
pt++;
|
||||
}
|
||||
maxNnz /= 2;
|
||||
|
||||
indices = palloc(maxNnz * sizeof(int32));
|
||||
values = palloc(maxNnz * sizeof(float));
|
||||
|
||||
while (sscanf(str, "(%d,%f)%n", &index, &value, &n) == 2)
|
||||
{
|
||||
/* TODO Better error */
|
||||
if (nnz == maxNnz)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("ran out of buffer: \"%s\"", lit)));
|
||||
|
||||
/* TODO Decide whether to store zero values */
|
||||
indices[nnz] = index;
|
||||
values[nnz] = value;
|
||||
nnz++;
|
||||
|
||||
str += n;
|
||||
|
||||
if (*str == ',')
|
||||
str++;
|
||||
else if (*str == '|')
|
||||
break;
|
||||
else
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("malformed svector literal: \"%s\"", lit)));
|
||||
}
|
||||
|
||||
if (sscanf(str, "|%d|%n", &dim, &n) != 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("malformed svector literal: \"%s\"", lit)));
|
||||
|
||||
str += n;
|
||||
|
||||
if (*str != '\0')
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
|
||||
errmsg("malformed svector literal: \"%s\"", lit),
|
||||
errdetail("Junk after closing pipe.")));
|
||||
|
||||
pfree(lit);
|
||||
|
||||
CheckDim(dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
result = InitSVector(dim, nnz);
|
||||
rvalues = SVECTOR_VALUES(result);
|
||||
for (int i = 0; i < nnz; i++)
|
||||
{
|
||||
result->indices[i] = indices[i];
|
||||
rvalues[i] = values[i];
|
||||
|
||||
CheckIndex(result->indices, i, dim);
|
||||
CheckElement(rvalues[i]);
|
||||
}
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert internal representation to textual representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_out);
|
||||
Datum
|
||||
svector_out(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svector = PG_GETARG_SVECTOR_P(0);
|
||||
float *values = SVECTOR_VALUES(svector);
|
||||
char *buf;
|
||||
char *ptr;
|
||||
int n;
|
||||
|
||||
/* TODO Improve code after deciding on format */
|
||||
|
||||
#if PG_VERSION_NUM < 120000
|
||||
int ndig = FLT_DIG + extra_float_digits;
|
||||
|
||||
if (ndig < 1)
|
||||
ndig = 1;
|
||||
|
||||
#define FLOAT_SHORTEST_DECIMAL_LEN (ndig + 10)
|
||||
#endif
|
||||
|
||||
/* TODO Move */
|
||||
#define APPEND_CHAR(ptr, ch) (*(ptr)++ = (ch))
|
||||
|
||||
/* TODO Improve */
|
||||
buf = (char *) palloc((FLOAT_SHORTEST_DECIMAL_LEN + 20) * svector->nnz + 20);
|
||||
ptr = buf;
|
||||
|
||||
for (int i = 0; i < svector->nnz; i++)
|
||||
{
|
||||
if (i > 0)
|
||||
APPEND_CHAR(ptr, ',');
|
||||
|
||||
n = sprintf(ptr, "(%d,", svector->indices[i]);
|
||||
ptr += n;
|
||||
|
||||
#if PG_VERSION_NUM >= 120000
|
||||
n = float_to_shortest_decimal_bufn(values[i], ptr);
|
||||
#else
|
||||
n = sprintf(ptr, "%.*g", ndig, values[i]);
|
||||
#endif
|
||||
ptr += n;
|
||||
|
||||
APPEND_CHAR(ptr, ')');
|
||||
}
|
||||
|
||||
n = sprintf(ptr, "|%d|", svector->dim);
|
||||
ptr += n;
|
||||
|
||||
APPEND_CHAR(ptr, '\0');
|
||||
|
||||
PG_FREE_IF_COPY(svector, 0);
|
||||
PG_RETURN_CSTRING(buf);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert type modifier
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_typmod_in);
|
||||
Datum
|
||||
svector_typmod_in(PG_FUNCTION_ARGS)
|
||||
{
|
||||
ArrayType *ta = PG_GETARG_ARRAYTYPE_P(0);
|
||||
int32 *tl;
|
||||
int n;
|
||||
|
||||
tl = ArrayGetIntegerTypmods(ta, &n);
|
||||
|
||||
if (n != 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
|
||||
errmsg("invalid type modifier")));
|
||||
|
||||
if (*tl < 1)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
|
||||
errmsg("dimensions for type svector must be at least 1")));
|
||||
|
||||
if (*tl > SVECTOR_MAX_DIM)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
|
||||
errmsg("dimensions for type svector cannot exceed %d", SVECTOR_MAX_DIM)));
|
||||
|
||||
PG_RETURN_INT32(*tl);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert external binary representation to internal representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_recv);
|
||||
Datum
|
||||
svector_recv(PG_FUNCTION_ARGS)
|
||||
{
|
||||
StringInfo buf = (StringInfo) PG_GETARG_POINTER(0);
|
||||
int32 typmod = PG_GETARG_INT32(2);
|
||||
SVector *result;
|
||||
int32 dim;
|
||||
int32 nnz;
|
||||
int32 unused;
|
||||
float *values;
|
||||
|
||||
dim = pq_getmsgint(buf, sizeof(int32));
|
||||
nnz = pq_getmsgint(buf, sizeof(int32));
|
||||
unused = pq_getmsgint(buf, sizeof(int32));
|
||||
|
||||
CheckDim(dim);
|
||||
CheckNnz(nnz, dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
if (unused != 0)
|
||||
ereport(ERROR,
|
||||
(errcode(ERRCODE_DATA_EXCEPTION),
|
||||
errmsg("expected unused to be 0, not %d", unused)));
|
||||
|
||||
result = InitSVector(dim, nnz);
|
||||
values = SVECTOR_VALUES(result);
|
||||
|
||||
for (int i = 0; i < nnz; i++)
|
||||
{
|
||||
result->indices[i] = pq_getmsgint(buf, sizeof(int32));
|
||||
CheckIndex(result->indices, i, dim);
|
||||
}
|
||||
|
||||
for (int i = 0; i < nnz; i++)
|
||||
{
|
||||
values[i] = pq_getmsgfloat4(buf);
|
||||
CheckElement(values[i]);
|
||||
}
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert internal representation to the external binary representation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_send);
|
||||
Datum
|
||||
svector_send(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svec = PG_GETARG_SVECTOR_P(0);
|
||||
float *values = SVECTOR_VALUES(svec);
|
||||
StringInfoData buf;
|
||||
|
||||
pq_begintypsend(&buf);
|
||||
pq_sendint(&buf, svec->dim, sizeof(int32));
|
||||
pq_sendint(&buf, svec->nnz, sizeof(int32));
|
||||
pq_sendint(&buf, svec->unused, sizeof(int32));
|
||||
for (int i = 0; i < svec->nnz; i++)
|
||||
pq_sendint(&buf, svec->indices[i], sizeof(int32));
|
||||
for (int i = 0; i < svec->nnz; i++)
|
||||
pq_sendfloat4(&buf, values[i]);
|
||||
|
||||
PG_RETURN_BYTEA_P(pq_endtypsend(&buf));
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert sparse vector to sparse vector
|
||||
* This is needed to check the type modifier
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector);
|
||||
Datum
|
||||
svector(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svec = PG_GETARG_SVECTOR_P(0);
|
||||
int32 typmod = PG_GETARG_INT32(1);
|
||||
|
||||
CheckExpectedDim(typmod, svec->dim);
|
||||
|
||||
PG_RETURN_POINTER(svec);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert dense vector to sparse vector
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_to_svector);
|
||||
Datum
|
||||
vector_to_svector(PG_FUNCTION_ARGS)
|
||||
{
|
||||
Vector *vec = PG_GETARG_VECTOR_P(0);
|
||||
int32 typmod = PG_GETARG_INT32(1);
|
||||
SVector *result;
|
||||
int dim = vec->dim;
|
||||
int nnz = 0;
|
||||
float *values;
|
||||
int j = 0;
|
||||
|
||||
CheckDim(dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
for (int i = 0; i < dim; i++)
|
||||
{
|
||||
if (vec->x[i] != 0)
|
||||
nnz++;
|
||||
}
|
||||
|
||||
result = InitSVector(dim, nnz);
|
||||
values = SVECTOR_VALUES(result);
|
||||
for (int i = 0; i < dim; i++)
|
||||
{
|
||||
if (vec->x[i] != 0)
|
||||
{
|
||||
/* Safety check */
|
||||
if (j == nnz)
|
||||
elog(ERROR, "safety check failed");
|
||||
|
||||
result->indices[j] = i;
|
||||
values[j] = vec->x[i];
|
||||
j++;
|
||||
}
|
||||
}
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the L2 squared distance between sparse vectors
|
||||
*/
|
||||
static double
|
||||
l2_distance_squared_internal(SVector * a, SVector * b)
|
||||
{
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
double distance = 0.0;
|
||||
int bpos = 0;
|
||||
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
{
|
||||
int ai = a->indices[i];
|
||||
int bi = -1;
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
{
|
||||
bi = b->indices[j];
|
||||
|
||||
if (ai == bi)
|
||||
{
|
||||
double diff = ax[i] - bx[j];
|
||||
|
||||
distance += diff * diff;
|
||||
}
|
||||
else if (ai > bi)
|
||||
distance += bx[j] * bx[j];
|
||||
|
||||
/* Update start for next iteration */
|
||||
if (ai >= bi)
|
||||
bpos = j + 1;
|
||||
|
||||
/* Found or passed it */
|
||||
if (bi >= ai)
|
||||
break;
|
||||
}
|
||||
|
||||
if (ai != bi)
|
||||
distance += ax[i] * ax[i];
|
||||
}
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
distance += bx[j] * bx[j];
|
||||
|
||||
return distance;
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the L2 distance between sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_l2_distance);
|
||||
Datum
|
||||
svector_l2_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(sqrt(l2_distance_squared_internal(a, b)));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the L2 squared distance between sparse vectors
|
||||
* This saves a sqrt calculation
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_l2_squared_distance);
|
||||
Datum
|
||||
svector_l2_squared_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(l2_distance_squared_internal(a, b));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the inner product of two sparse vectors
|
||||
*/
|
||||
static double
|
||||
inner_product_internal(SVector * a, SVector * b)
|
||||
{
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
double distance = 0.0;
|
||||
int bpos = 0;
|
||||
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
{
|
||||
int ai = a->indices[i];
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
{
|
||||
int bi = b->indices[j];
|
||||
|
||||
/* Only update when the same index */
|
||||
if (ai == bi)
|
||||
distance += ax[i] * bx[j];
|
||||
|
||||
/* Update start for next iteration */
|
||||
if (ai >= bi)
|
||||
bpos = j + 1;
|
||||
|
||||
/* Found or passed it */
|
||||
if (bi >= ai)
|
||||
break;
|
||||
}
|
||||
}
|
||||
|
||||
return distance;
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the inner product of two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_inner_product);
|
||||
Datum
|
||||
svector_inner_product(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(inner_product_internal(a, b));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the negative inner product of two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_negative_inner_product);
|
||||
Datum
|
||||
svector_negative_inner_product(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
PG_RETURN_FLOAT8(-inner_product_internal(a, b));
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the cosine distance between two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_cosine_distance);
|
||||
Datum
|
||||
svector_cosine_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
float norma = 0.0;
|
||||
float normb = 0.0;
|
||||
double similarity;
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
similarity = inner_product_internal(a, b);
|
||||
|
||||
/* Auto-vectorized */
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
norma += ax[i] * ax[i];
|
||||
|
||||
/* Auto-vectorized */
|
||||
for (int i = 0; i < b->nnz; i++)
|
||||
normb += bx[i] * bx[i];
|
||||
|
||||
/* Use sqrt(a * b) over sqrt(a) * sqrt(b) */
|
||||
similarity /= sqrt((double) norma * (double) normb);
|
||||
|
||||
#ifdef _MSC_VER
|
||||
/* /fp:fast may not propagate NaN */
|
||||
if (isnan(similarity))
|
||||
PG_RETURN_FLOAT8(NAN);
|
||||
#endif
|
||||
|
||||
/* Keep in range */
|
||||
if (similarity > 1)
|
||||
similarity = 1.0;
|
||||
else if (similarity < -1)
|
||||
similarity = -1.0;
|
||||
|
||||
PG_RETURN_FLOAT8(1.0 - similarity);
|
||||
}
|
||||
|
||||
/*
|
||||
* Get the weighted Jaccard distance between two sparse vectors
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_jaccard_distance);
|
||||
Datum
|
||||
svector_jaccard_distance(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *a = PG_GETARG_SVECTOR_P(0);
|
||||
SVector *b = PG_GETARG_SVECTOR_P(1);
|
||||
float *ax = SVECTOR_VALUES(a);
|
||||
float *bx = SVECTOR_VALUES(b);
|
||||
double num = 0.0;
|
||||
double denom = 0.0;
|
||||
int bpos = 0;
|
||||
|
||||
CheckDims(a, b);
|
||||
|
||||
/*
|
||||
* Weighted Jaccard distance is not defined for vectors with negative
|
||||
* values. Could check and return NaN if minimal impact on performance.
|
||||
*/
|
||||
|
||||
for (int i = 0; i < a->nnz; i++)
|
||||
{
|
||||
int ai = a->indices[i];
|
||||
int bi = -1;
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
{
|
||||
bi = b->indices[j];
|
||||
|
||||
if (ai == bi)
|
||||
{
|
||||
num += ax[i] < bx[j] ? ax[i] : bx[j];
|
||||
denom += ax[i] > bx[j] ? ax[i] : bx[j];
|
||||
}
|
||||
else if (ai > bi)
|
||||
denom += bx[j];
|
||||
|
||||
/* Update start for next iteration */
|
||||
if (ai >= bi)
|
||||
bpos = j + 1;
|
||||
|
||||
/* Found or passed it */
|
||||
if (bi >= ai)
|
||||
break;
|
||||
}
|
||||
|
||||
if (ai != bi)
|
||||
denom += ax[i];
|
||||
}
|
||||
|
||||
for (int j = bpos; j < b->nnz; j++)
|
||||
denom += bx[j];
|
||||
|
||||
if (denom > 0)
|
||||
PG_RETURN_FLOAT8(1.0 - (num / denom));
|
||||
else
|
||||
PG_RETURN_FLOAT8(NAN);
|
||||
}
|
||||
23
src/svector.h
Normal file
23
src/svector.h
Normal file
@@ -0,0 +1,23 @@
|
||||
#ifndef SVECTOR_H
|
||||
#define SVECTOR_H
|
||||
|
||||
#define SVECTOR_MAX_DIM 100000
|
||||
|
||||
#define SVECTOR_SIZE(_nnz) (offsetof(SVector, indices) + (_nnz) * sizeof(int32) + (_nnz * sizeof(float)))
|
||||
#define SVECTOR_VALUES(x) ((float *) (((char *) (x)) + offsetof(SVector, indices) + (x)->nnz * sizeof(int32)))
|
||||
#define DatumGetSVector(x) ((SVector *) PG_DETOAST_DATUM(x))
|
||||
#define PG_GETARG_SVECTOR_P(x) DatumGetSVector(PG_GETARG_DATUM(x))
|
||||
#define PG_RETURN_SVECTOR_P(x) PG_RETURN_POINTER(x)
|
||||
|
||||
typedef struct SVector
|
||||
{
|
||||
int32 vl_len_; /* varlena header (do not touch directly!) */
|
||||
int32 dim; /* number of dimensions */
|
||||
int32 nnz;
|
||||
int32 unused;
|
||||
int32 indices[FLEXIBLE_ARRAY_MEMBER];
|
||||
} SVector;
|
||||
|
||||
SVector *InitSVector(int dim, int nnz);
|
||||
|
||||
#endif
|
||||
24
src/vector.c
24
src/vector.c
@@ -9,6 +9,7 @@
|
||||
#include "lib/stringinfo.h"
|
||||
#include "libpq/pqformat.h"
|
||||
#include "port.h" /* for strtof() */
|
||||
#include "svector.h"
|
||||
#include "utils/array.h"
|
||||
#include "utils/builtins.h"
|
||||
#include "utils/lsyscache.h"
|
||||
@@ -1151,3 +1152,26 @@ vector_avg(PG_FUNCTION_ARGS)
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
/*
|
||||
* Convert sparse vector to dense vector
|
||||
*/
|
||||
PGDLLEXPORT PG_FUNCTION_INFO_V1(svector_to_vector);
|
||||
Datum
|
||||
svector_to_vector(PG_FUNCTION_ARGS)
|
||||
{
|
||||
SVector *svec = PG_GETARG_SVECTOR_P(0);
|
||||
int32 typmod = PG_GETARG_INT32(1);
|
||||
Vector *result;
|
||||
int dim = svec->dim;
|
||||
float *values = SVECTOR_VALUES(svec);
|
||||
|
||||
CheckDim(dim);
|
||||
CheckExpectedDim(typmod, dim);
|
||||
|
||||
result = InitVector(dim);
|
||||
for (int i = 0; i < svec->nnz; i++)
|
||||
result->x[svec->indices[i]] = values[i];
|
||||
|
||||
PG_RETURN_POINTER(result);
|
||||
}
|
||||
|
||||
@@ -54,85 +54,85 @@ SELECT vector_norm('[3e37,4e37]')::real;
|
||||
5e+37
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('[0,0]', '[3,4]');
|
||||
SELECT l2_distance('[0,0]'::vector, '[3,4]');
|
||||
l2_distance
|
||||
-------------
|
||||
5
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('[0,0]', '[0,1]');
|
||||
SELECT l2_distance('[0,0]'::vector, '[0,1]');
|
||||
l2_distance
|
||||
-------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('[1,2]', '[3]');
|
||||
SELECT l2_distance('[1,2]'::vector, '[3]');
|
||||
ERROR: different vector dimensions 2 and 1
|
||||
SELECT l2_distance('[3e38]', '[-3e38]');
|
||||
SELECT l2_distance('[3e38]'::vector, '[-3e38]');
|
||||
l2_distance
|
||||
-------------
|
||||
Infinity
|
||||
(1 row)
|
||||
|
||||
SELECT inner_product('[1,2]', '[3,4]');
|
||||
SELECT inner_product('[1,2]'::vector, '[3,4]');
|
||||
inner_product
|
||||
---------------
|
||||
11
|
||||
(1 row)
|
||||
|
||||
SELECT inner_product('[1,2]', '[3]');
|
||||
SELECT inner_product('[1,2]'::vector, '[3]');
|
||||
ERROR: different vector dimensions 2 and 1
|
||||
SELECT inner_product('[3e38]', '[3e38]');
|
||||
SELECT inner_product('[3e38]'::vector, '[3e38]');
|
||||
inner_product
|
||||
---------------
|
||||
Infinity
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,2]', '[2,4]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[2,4]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,2]', '[0,0]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[0,0]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,1]', '[1,1]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1,1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,0]', '[0,2]');
|
||||
SELECT cosine_distance('[1,0]'::vector, '[0,2]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,1]', '[-1,-1]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1,-1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
2
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,2]', '[3]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[3]');
|
||||
ERROR: different vector dimensions 2 and 1
|
||||
SELECT cosine_distance('[1,1]', '[1.1,1.1]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[1,1]', '[-1.1,-1.1]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
2
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('[3e38]', '[3e38]');
|
||||
SELECT cosine_distance('[3e38]'::vector, '[3e38]');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
|
||||
140
test/expected/svector.out
Normal file
140
test/expected/svector.out
Normal file
@@ -0,0 +1,140 @@
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector;
|
||||
svector
|
||||
--------------------
|
||||
(0,1.5),(2,3.5)|5|
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector;
|
||||
vector
|
||||
-----------------
|
||||
[1.5,0,3.5,0,0]
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(5);
|
||||
vector
|
||||
-----------------
|
||||
[1.5,0,3.5,0,0]
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(4);
|
||||
ERROR: expected 4 dimensions, not 5
|
||||
SELECT '[0,1.5,0,3.5,0]'::vector::svector;
|
||||
svector
|
||||
--------------------
|
||||
(1,1.5),(3,3.5)|5|
|
||||
(1 row)
|
||||
|
||||
SELECT '(0,0),(1,1),(2,0)|3|'::svector;
|
||||
svector
|
||||
----------------------
|
||||
(0,0),(1,1),(2,0)|3|
|
||||
(1 row)
|
||||
|
||||
SELECT '|5|'::svector;
|
||||
svector
|
||||
---------
|
||||
|5|
|
||||
(1 row)
|
||||
|
||||
SELECT '|-1|'::svector;
|
||||
ERROR: svector must have at least 1 dimension
|
||||
LINE 1: SELECT '|-1|'::svector;
|
||||
^
|
||||
SELECT '|100001|'::svector;
|
||||
ERROR: svector cannot have more than 100000 dimensions
|
||||
LINE 1: SELECT '|100001|'::svector;
|
||||
^
|
||||
SELECT '|16001|'::svector::vector;
|
||||
ERROR: vector cannot have more than 16000 dimensions
|
||||
SELECT '(-1,1)|1|'::svector;
|
||||
ERROR: index must not be negative
|
||||
LINE 1: SELECT '(-1,1)|1|'::svector;
|
||||
^
|
||||
SELECT '(1,1)|1|'::svector;
|
||||
ERROR: index must be less than dimensions
|
||||
LINE 1: SELECT '(1,1)|1|'::svector;
|
||||
^
|
||||
SELECT '|1|'::svector(2);
|
||||
ERROR: expected 2 dimensions, not 1
|
||||
SELECT l2_distance('|2|'::svector, '(0,3),(1,4)|2|');
|
||||
l2_distance
|
||||
-------------
|
||||
5
|
||||
(1 row)
|
||||
|
||||
SELECT l2_distance('|2|'::svector, '(1,1)|2|');
|
||||
l2_distance
|
||||
-------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT '|2|'::svector <-> '(0,3),(1,4)|2|';
|
||||
?column?
|
||||
----------
|
||||
5
|
||||
(1 row)
|
||||
|
||||
SELECT inner_product('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
inner_product
|
||||
---------------
|
||||
10
|
||||
(1 row)
|
||||
|
||||
SELECT svector_negative_inner_product('(0,1),(1,2)|2|', '(0,2),(1,4)|2|');
|
||||
svector_negative_inner_product
|
||||
--------------------------------
|
||||
-10
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,1)|2|'::svector, '(0,-1),(1,-1)|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
2
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(1,2)|2|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('|1|'::svector, '|1|');
|
||||
cosine_distance
|
||||
-----------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(0,1)|3|');
|
||||
ERROR: different svector dimensions 2 and 3
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|2|');
|
||||
jaccard_distance
|
||||
------------------
|
||||
0
|
||||
(1 row)
|
||||
|
||||
SELECT jaccard_distance('(0,1)|2|', '(1,1)|2|');
|
||||
jaccard_distance
|
||||
------------------
|
||||
1
|
||||
(1 row)
|
||||
|
||||
SELECT jaccard_distance('|1|', '|1|');
|
||||
jaccard_distance
|
||||
------------------
|
||||
NaN
|
||||
(1 row)
|
||||
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|3|');
|
||||
ERROR: different svector dimensions 2 and 3
|
||||
@@ -13,24 +13,24 @@ SELECT vector_norm('[3,4]');
|
||||
SELECT vector_norm('[0,1]');
|
||||
SELECT vector_norm('[3e37,4e37]')::real;
|
||||
|
||||
SELECT l2_distance('[0,0]', '[3,4]');
|
||||
SELECT l2_distance('[0,0]', '[0,1]');
|
||||
SELECT l2_distance('[1,2]', '[3]');
|
||||
SELECT l2_distance('[3e38]', '[-3e38]');
|
||||
SELECT l2_distance('[0,0]'::vector, '[3,4]');
|
||||
SELECT l2_distance('[0,0]'::vector, '[0,1]');
|
||||
SELECT l2_distance('[1,2]'::vector, '[3]');
|
||||
SELECT l2_distance('[3e38]'::vector, '[-3e38]');
|
||||
|
||||
SELECT inner_product('[1,2]', '[3,4]');
|
||||
SELECT inner_product('[1,2]', '[3]');
|
||||
SELECT inner_product('[3e38]', '[3e38]');
|
||||
SELECT inner_product('[1,2]'::vector, '[3,4]');
|
||||
SELECT inner_product('[1,2]'::vector, '[3]');
|
||||
SELECT inner_product('[3e38]'::vector, '[3e38]');
|
||||
|
||||
SELECT cosine_distance('[1,2]', '[2,4]');
|
||||
SELECT cosine_distance('[1,2]', '[0,0]');
|
||||
SELECT cosine_distance('[1,1]', '[1,1]');
|
||||
SELECT cosine_distance('[1,0]', '[0,2]');
|
||||
SELECT cosine_distance('[1,1]', '[-1,-1]');
|
||||
SELECT cosine_distance('[1,2]', '[3]');
|
||||
SELECT cosine_distance('[1,1]', '[1.1,1.1]');
|
||||
SELECT cosine_distance('[1,1]', '[-1.1,-1.1]');
|
||||
SELECT cosine_distance('[3e38]', '[3e38]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[2,4]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[0,0]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1,1]');
|
||||
SELECT cosine_distance('[1,0]'::vector, '[0,2]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1,-1]');
|
||||
SELECT cosine_distance('[1,2]'::vector, '[3]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]');
|
||||
SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]');
|
||||
SELECT cosine_distance('[3e38]'::vector, '[3e38]');
|
||||
|
||||
SELECT l1_distance('[0,0]', '[3,4]');
|
||||
SELECT l1_distance('[0,0]', '[0,1]');
|
||||
|
||||
36
test/sql/svector.sql
Normal file
36
test/sql/svector.sql
Normal file
@@ -0,0 +1,36 @@
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector;
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector;
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(5);
|
||||
SELECT '(0,1.5),(2,3.5)|5|'::svector::vector(4);
|
||||
SELECT '[0,1.5,0,3.5,0]'::vector::svector;
|
||||
|
||||
SELECT '(0,0),(1,1),(2,0)|3|'::svector;
|
||||
|
||||
SELECT '|5|'::svector;
|
||||
SELECT '|-1|'::svector;
|
||||
SELECT '|100001|'::svector;
|
||||
SELECT '|16001|'::svector::vector;
|
||||
|
||||
SELECT '(-1,1)|1|'::svector;
|
||||
SELECT '(1,1)|1|'::svector;
|
||||
|
||||
SELECT '|1|'::svector(2);
|
||||
|
||||
SELECT l2_distance('|2|'::svector, '(0,3),(1,4)|2|');
|
||||
SELECT l2_distance('|2|'::svector, '(1,1)|2|');
|
||||
SELECT '|2|'::svector <-> '(0,3),(1,4)|2|';
|
||||
|
||||
SELECT inner_product('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
SELECT svector_negative_inner_product('(0,1),(1,2)|2|', '(0,2),(1,4)|2|');
|
||||
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '(0,2),(1,4)|2|');
|
||||
SELECT cosine_distance('(0,1),(1,2)|2|'::svector, '|2|');
|
||||
SELECT cosine_distance('(0,1),(1,1)|2|'::svector, '(0,-1),(1,-1)|2|');
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(1,2)|2|');
|
||||
SELECT cosine_distance('|1|'::svector, '|1|');
|
||||
SELECT cosine_distance('(0,1)|2|'::svector, '(0,1)|3|');
|
||||
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|2|');
|
||||
SELECT jaccard_distance('(0,1)|2|', '(1,1)|2|');
|
||||
SELECT jaccard_distance('|1|', '|1|');
|
||||
SELECT jaccard_distance('(0,1)|2|', '(0,1)|3|');
|
||||
@@ -1,107 +0,0 @@
|
||||
use strict;
|
||||
use warnings;
|
||||
use PostgresNode;
|
||||
use TestLib;
|
||||
use Test::More;
|
||||
|
||||
my $node;
|
||||
my @queries = ();
|
||||
my @cs = ();
|
||||
my @expected;
|
||||
my $limit = 20;
|
||||
my $dim = 3;
|
||||
my $array_sql = join(",", ('random()') x $dim);
|
||||
my $nc = 50;
|
||||
|
||||
sub test_recall
|
||||
{
|
||||
my ($min, $operator) = @_;
|
||||
my $correct = 0;
|
||||
my $total = 0;
|
||||
|
||||
my $explain = $node->safe_psql("postgres", qq(
|
||||
SET enable_seqscan = off;
|
||||
EXPLAIN ANALYZE SELECT i FROM tst WHERE c = $cs[0] ORDER BY v $operator '$queries[0]' LIMIT $limit;
|
||||
));
|
||||
like($explain, qr/Index Cond/);
|
||||
|
||||
for my $i (0 .. $#queries)
|
||||
{
|
||||
my $actual = $node->safe_psql("postgres", qq(
|
||||
SET enable_seqscan = off;
|
||||
SELECT i FROM tst WHERE c = $cs[$i] ORDER BY v $operator '$queries[$i]' LIMIT $limit;
|
||||
));
|
||||
my @actual_ids = split("\n", $actual);
|
||||
my %actual_set = map { $_ => 1 } @actual_ids;
|
||||
|
||||
my @expected_ids = split("\n", $expected[$i]);
|
||||
|
||||
foreach (@expected_ids)
|
||||
{
|
||||
if (exists($actual_set{$_}))
|
||||
{
|
||||
$correct++;
|
||||
}
|
||||
$total++;
|
||||
}
|
||||
}
|
||||
|
||||
cmp_ok($correct / $total, ">=", $min, $operator);
|
||||
}
|
||||
|
||||
# Initialize node
|
||||
$node = get_new_node('node');
|
||||
$node->init;
|
||||
$node->start;
|
||||
|
||||
# Create table
|
||||
$node->safe_psql("postgres", "CREATE EXTENSION vector;");
|
||||
$node->safe_psql("postgres", "CREATE TABLE tst (i int4, v vector($dim), c int8);");
|
||||
$node->safe_psql("postgres",
|
||||
"INSERT INTO tst SELECT i, ARRAY[$array_sql], i % $nc FROM generate_series(1, 20000) i;"
|
||||
);
|
||||
|
||||
# Generate queries
|
||||
for (1 .. 20)
|
||||
{
|
||||
my @r = ();
|
||||
for (1 .. $dim)
|
||||
{
|
||||
push(@r, rand());
|
||||
}
|
||||
push(@queries, "[" . join(",", @r) . "]");
|
||||
push(@cs, int(rand() * $nc));
|
||||
}
|
||||
|
||||
# Get exact results
|
||||
@expected = ();
|
||||
for my $i (0 .. $#queries)
|
||||
{
|
||||
my $res = $node->safe_psql("postgres", "SELECT i FROM tst WHERE c = $cs[$i] ORDER BY v <-> '$queries[$i]' LIMIT $limit;");
|
||||
push(@expected, $res);
|
||||
}
|
||||
|
||||
# Add index
|
||||
$node->safe_psql("postgres", "CREATE INDEX ON tst USING hnsw (v vector_l2_ops, c);");
|
||||
|
||||
# Test recall
|
||||
test_recall(0.99, '<->');
|
||||
|
||||
# Test vacuum
|
||||
$node->safe_psql("postgres", "DELETE FROM tst WHERE c > 5;");
|
||||
$node->safe_psql("postgres", "VACUUM tst;");
|
||||
|
||||
# Test columns
|
||||
my ($ret, $stdout, $stderr) = $node->psql("postgres", "CREATE INDEX ON tst USING hnsw (c);");
|
||||
like($stderr, qr/first column must be a vector/);
|
||||
|
||||
($ret, $stdout, $stderr) = $node->psql("postgres", "CREATE INDEX ON tst USING hnsw (c, v vector_l2_ops);");
|
||||
like($stderr, qr/first column must be a vector/);
|
||||
|
||||
($ret, $stdout, $stderr) = $node->psql("postgres", "CREATE INDEX ON tst USING hnsw (v vector_l2_ops, c, c);");
|
||||
like($stderr, qr/index cannot have more than two columns/);
|
||||
|
||||
($ret, $stdout, $stderr) = $node->psql("postgres", "CREATE INDEX ON tst USING hnsw (v vector_l2_ops, v vector_l2_ops);");
|
||||
like($stderr, qr/column 2 cannot be a vector/);
|
||||
|
||||
done_testing();
|
||||
Reference in New Issue
Block a user