mirror of
https://github.com/microsoft/qlib.git
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540 lines
18 KiB
Python
540 lines
18 KiB
Python
from ...utils.serial import Serializable
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from typing import Union, List, Tuple, Dict, Text, Optional
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from ...utils import init_instance_by_config, np_ffill
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from ...log import get_module_logger
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from .handler import DataHandler, DataHandlerLP
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from copy import deepcopy
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from inspect import getfullargspec
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import pandas as pd
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import numpy as np
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import bisect
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from ...utils import lazy_sort_index
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from .utils import get_level_index
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class Dataset(Serializable):
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"""
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Preparing data for model training and inferencing.
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"""
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def __init__(self, **kwargs):
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"""
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init is designed to finish following steps:
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- init the sub instance and the state of the dataset(info to prepare the data)
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- The name of essential state for preparing data should not start with '_' so that it could be serialized on disk when serializing.
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- setup data
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- The data related attributes' names should start with '_' so that it will not be saved on disk when serializing.
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The data could specify the info to calculate the essential data for preparation
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"""
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self.setup_data(**kwargs)
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super().__init__()
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def config(self, **kwargs):
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"""
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config is designed to configure and parameters that cannot be learned from the data
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"""
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super().config(**kwargs)
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def setup_data(self, **kwargs):
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"""
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Setup the data.
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We split the setup_data function for following situation:
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- User have a Dataset object with learned status on disk.
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- User load the Dataset object from the disk.
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- User call `setup_data` to load new data.
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- User prepare data for model based on previous status.
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"""
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pass
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def prepare(self, **kwargs) -> object:
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"""
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The type of dataset depends on the model. (It could be pd.DataFrame, pytorch.DataLoader, etc.)
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The parameters should specify the scope for the prepared data
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The method should:
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- process the data
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- return the processed data
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Returns
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-------
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object:
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return the object
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"""
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pass
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class DatasetH(Dataset):
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"""
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Dataset with Data(H)andler
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User should try to put the data preprocessing functions into handler.
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Only following data processing functions should be placed in Dataset:
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- The processing is related to specific model.
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- The processing is related to data split.
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"""
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def __init__(self, handler: Union[Dict, DataHandler], segments: Dict[Text, Tuple], **kwargs):
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"""
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Setup the underlying data.
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Parameters
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----------
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handler : Union[dict, DataHandler]
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handler could be:
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- instance of `DataHandler`
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- config of `DataHandler`. Please refer to `DataHandler`
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segments : dict
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Describe the options to segment the data.
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Here are some examples:
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.. code-block::
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1) 'segments': {
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'train': ("2008-01-01", "2014-12-31"),
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'valid': ("2017-01-01", "2020-08-01",),
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'test': ("2015-01-01", "2016-12-31",),
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}
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2) 'segments': {
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'insample': ("2008-01-01", "2014-12-31"),
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'outsample': ("2017-01-01", "2020-08-01",),
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}
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"""
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self.handler: DataHandler = init_instance_by_config(handler, accept_types=DataHandler)
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self.segments = segments.copy()
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self.fetch_kwargs = {}
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super().__init__(**kwargs)
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def config(self, handler_kwargs: dict = None, **kwargs):
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"""
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Initialize the DatasetH
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Parameters
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----------
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handler_kwargs : dict
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Config of DataHandler, which could include the following arguments:
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- arguments of DataHandler.conf_data, such as 'instruments', 'start_time' and 'end_time'.
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kwargs : dict
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Config of DatasetH, such as
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- segments : dict
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Config of segments which is same as 'segments' in self.__init__
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"""
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if handler_kwargs is not None:
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self.handler.config(**handler_kwargs)
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if "segments" in kwargs:
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self.segments = deepcopy(kwargs.pop("segments"))
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super().config(**kwargs)
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def setup_data(self, handler_kwargs: dict = None, **kwargs):
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"""
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Setup the Data
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Parameters
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----------
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handler_kwargs : dict
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init arguments of DataHandler, which could include the following arguments:
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- init_type : Init Type of Handler
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- enable_cache : whether to enable cache
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"""
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super().setup_data(**kwargs)
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if handler_kwargs is not None:
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self.handler.setup_data(**handler_kwargs)
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def __repr__(self):
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return "{name}(handler={handler}, segments={segments})".format(
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name=self.__class__.__name__, handler=self.handler, segments=self.segments
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)
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def _prepare_seg(self, slc: slice, **kwargs):
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"""
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Give a slice, retrieve the according data
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Parameters
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----------
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slc : slice
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"""
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if hasattr(self, "fetch_kwargs"):
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return self.handler.fetch(slc, **kwargs, **self.fetch_kwargs)
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else:
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return self.handler.fetch(slc, **kwargs)
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def prepare(
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self,
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segments: Union[List[Text], Tuple[Text], Text, slice],
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col_set=DataHandler.CS_ALL,
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data_key=DataHandlerLP.DK_I,
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**kwargs,
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) -> Union[List[pd.DataFrame], pd.DataFrame]:
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"""
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Prepare the data for learning and inference.
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Parameters
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----------
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segments : Union[List[Text], Tuple[Text], Text, slice]
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Describe the scope of the data to be prepared
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Here are some examples:
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- 'train'
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- ['train', 'valid']
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col_set : str
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The col_set will be passed to self.handler when fetching data.
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data_key : str
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The data to fetch: DK_*
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Default is DK_I, which indicate fetching data for **inference**.
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kwargs :
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The parameters that kwargs may contain:
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flt_col : str
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It only exists in TSDatasetH, can be used to add a column of data(True or False) to filter data.
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This parameter is only supported when it is an instance of TSDatasetH.
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Returns
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-------
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Union[List[pd.DataFrame], pd.DataFrame]:
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Raises
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------
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NotImplementedError:
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"""
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logger = get_module_logger("DatasetH")
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fetch_kwargs = {"col_set": col_set}
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fetch_kwargs.update(kwargs)
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if "data_key" in getfullargspec(self.handler.fetch).args:
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fetch_kwargs["data_key"] = data_key
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else:
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logger.info(f"data_key[{data_key}] is ignored.")
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# Handle all kinds of segments format
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if isinstance(segments, (list, tuple)):
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return [self._prepare_seg(slice(*self.segments[seg]), **fetch_kwargs) for seg in segments]
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elif isinstance(segments, str):
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return self._prepare_seg(slice(*self.segments[segments]), **fetch_kwargs)
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elif isinstance(segments, slice):
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return self._prepare_seg(segments, **fetch_kwargs)
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else:
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raise NotImplementedError(f"This type of input is not supported")
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class TSDataSampler:
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"""
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(T)ime-(S)eries DataSampler
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This is the result of TSDatasetH
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It works like `torch.data.utils.Dataset`, it provides a very convenient interface for constructing time-series
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dataset based on tabular data.
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If user have further requirements for processing data, user could process them based on `TSDataSampler` or create
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more powerful subclasses.
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Known Issues:
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- For performance issues, this Sampler will convert dataframe into arrays for better performance. This could result
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in a different data type
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"""
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def __init__(
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self, data: pd.DataFrame, start, end, step_len: int, fillna_type: str = "none", dtype=None, flt_data=None
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):
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"""
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Build a dataset which looks like torch.data.utils.Dataset.
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Parameters
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----------
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data : pd.DataFrame
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The raw tabular data
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start :
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The indexable start time
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end :
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The indexable end time
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step_len : int
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The length of the time-series step
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fillna_type : int
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How will qlib handle the sample if there is on sample in a specific date.
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none:
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fill with np.nan
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ffill:
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ffill with previous sample
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ffill+bfill:
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ffill with previous samples first and fill with later samples second
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flt_data : pd.Series
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a column of data(True or False) to filter data.
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None:
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kepp all data
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"""
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self.start = start
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self.end = end
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self.step_len = step_len
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self.fillna_type = fillna_type
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assert get_level_index(data, "datetime") == 0
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self.data = lazy_sort_index(data)
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kwargs = {"object": self.data}
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if dtype is not None:
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kwargs["dtype"] = dtype
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self.data_arr = np.array(**kwargs) # Get index from numpy.array will much faster than DataFrame.values!
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# NOTE:
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# - append last line with full NaN for better performance in `__getitem__`
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# - Keep the same dtype will result in a better performance
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self.data_arr = np.append(
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self.data_arr, np.full((1, self.data_arr.shape[1]), np.nan, dtype=self.data_arr.dtype), axis=0
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)
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self.nan_idx = -1 # The last line is all NaN
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# the data type will be changed
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# The index of usable data is between start_idx and end_idx
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self.idx_df, self.idx_map = self.build_index(self.data)
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self.data_index = deepcopy(self.data.index)
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if flt_data is not None:
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self.flt_data = np.array(flt_data.reindex(self.data_index)).reshape(-1)
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self.idx_map = self.flt_idx_map(self.flt_data, self.idx_map)
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self.data_index = self.data_index[np.where(self.flt_data == True)[0]]
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self.start_idx, self.end_idx = self.data_index.slice_locs(start=pd.Timestamp(start), end=pd.Timestamp(end))
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self.idx_arr = np.array(self.idx_df.values, dtype=np.float64) # for better performance
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del self.data # save memory
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@staticmethod
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def flt_idx_map(flt_data, idx_map):
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idx = 0
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new_idx_map = {}
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for i, exist in enumerate(flt_data):
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if exist:
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new_idx_map[idx] = idx_map[i]
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idx += 1
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return new_idx_map
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def get_index(self):
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"""
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Get the pandas index of the data, it will be useful in following scenarios
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- Special sampler will be used (e.g. user want to sample day by day)
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"""
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return self.data_index[self.start_idx : self.end_idx]
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def config(self, **kwargs):
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# Config the attributes
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for k, v in kwargs.items():
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setattr(self, k, v)
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@staticmethod
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def build_index(data: pd.DataFrame) -> dict:
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"""
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The relation of the data
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Parameters
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----------
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data : pd.DataFrame
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The dataframe with <datetime, DataFrame>
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Returns
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-------
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dict:
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{<index>: <prev_index or None>}
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# get the previous index of a line given index
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"""
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# object incase of pandas converting int to flaot
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idx_df = pd.Series(range(data.shape[0]), index=data.index, dtype=object)
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idx_df = lazy_sort_index(idx_df.unstack())
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# NOTE: the correctness of `__getitem__` depends on columns sorted here
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idx_df = lazy_sort_index(idx_df, axis=1)
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idx_map = {}
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for i, (_, row) in enumerate(idx_df.iterrows()):
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for j, real_idx in enumerate(row):
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if not np.isnan(real_idx):
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idx_map[real_idx] = (i, j)
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return idx_df, idx_map
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def _get_indices(self, row: int, col: int) -> np.array:
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"""
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get series indices of self.data_arr from the row, col indices of self.idx_df
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Parameters
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----------
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row : int
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the row in self.idx_df
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col : int
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the col in self.idx_df
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Returns
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-------
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np.array:
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The indices of data of the data
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"""
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indices = self.idx_arr[max(row - self.step_len + 1, 0) : row + 1, col]
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if len(indices) < self.step_len:
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indices = np.concatenate([np.full((self.step_len - len(indices),), np.nan), indices])
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if self.fillna_type == "ffill":
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indices = np_ffill(indices)
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elif self.fillna_type == "ffill+bfill":
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indices = np_ffill(np_ffill(indices)[::-1])[::-1]
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else:
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assert self.fillna_type == "none"
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return indices
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def _get_row_col(self, idx) -> Tuple[int]:
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"""
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get the col index and row index of a given sample index in self.idx_df
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Parameters
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----------
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idx :
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the input of `__getitem__`
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Returns
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-------
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Tuple[int]:
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the row and col index
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"""
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# The the right row number `i` and col number `j` in idx_df
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if isinstance(idx, (int, np.integer)):
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real_idx = self.start_idx + idx
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if self.start_idx <= real_idx < self.end_idx:
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i, j = self.idx_map[real_idx] # TODO: The performance of this line is not good
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else:
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raise KeyError(f"{real_idx} is out of [{self.start_idx}, {self.end_idx})")
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elif isinstance(idx, tuple):
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# <TSDataSampler object>["datetime", "instruments"]
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date, inst = idx
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date = pd.Timestamp(date)
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i = bisect.bisect_right(self.idx_df.index, date) - 1
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# NOTE: This relies on the idx_df columns sorted in `__init__`
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j = bisect.bisect_left(self.idx_df.columns, inst)
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else:
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raise NotImplementedError(f"This type of input is not supported")
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return i, j
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def __getitem__(self, idx: Union[int, Tuple[object, str], List[int]]):
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"""
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# We have two method to get the time-series of a sample
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tsds is a instance of TSDataSampler
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# 1) sample by int index directly
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tsds[len(tsds) - 1]
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# 2) sample by <datetime,instrument> index
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tsds['2016-12-31', "SZ300315"]
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# The return value will be similar to the data retrieved by following code
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df.loc(axis=0)['2015-01-01':'2016-12-31', "SZ300315"].iloc[-30:]
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Parameters
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----------
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idx : Union[int, Tuple[object, str]]
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"""
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# Multi-index type
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mtit = (list, np.ndarray)
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if isinstance(idx, mtit):
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indices = [self._get_indices(*self._get_row_col(i)) for i in idx]
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indices = np.concatenate(indices)
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else:
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indices = self._get_indices(*self._get_row_col(idx))
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# 1) for better performance, use the last nan line for padding the lost date
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# 2) In case of precision problems. We use np.float64. # TODO: I'm not sure if whether np.float64 will result in
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# precision problems. It will not cause any problems in my tests at least
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indices = np.nan_to_num(indices.astype(np.float64), nan=self.nan_idx).astype(int)
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data = self.data_arr[indices]
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if isinstance(idx, mtit):
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# if we get multiple indexes, addition dimension should be added.
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# <sample_idx, step_idx, feature_idx>
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data = data.reshape(-1, self.step_len, *data.shape[1:])
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return data
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def __len__(self):
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return self.end_idx - self.start_idx
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class TSDatasetH(DatasetH):
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"""
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(T)ime-(S)eries Dataset (H)andler
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Convert the tabular data to Time-Series data
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Requirements analysis
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The typical workflow of a user to get time-series data for an sample
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- process features
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- slice proper data from data handler: dimension of sample <feature, >
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- Build relation of samples by <time, instrument> index
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- Be able to sample times series of data <timestep, feature>
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- It will be better if the interface is like "torch.utils.data.Dataset"
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- User could build customized batch based on the data
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- The dimension of a batch of data <batch_idx, feature, timestep>
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"""
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def __init__(self, step_len=30, **kwargs):
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self.step_len = step_len
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super().__init__(**kwargs)
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def config(self, **kwargs):
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if "step_len" in kwargs:
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self.step_len = kwargs.pop("step_len")
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super().config(**kwargs)
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def setup_data(self, **kwargs):
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super().setup_data(**kwargs)
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cal = self.handler.fetch(col_set=self.handler.CS_RAW).index.get_level_values("datetime").unique()
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cal = sorted(cal)
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self.cal = cal
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def _prepare_raw_seg(self, slc: slice, **kwargs) -> pd.DataFrame:
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# Dataset decide how to slice data(Get more data for timeseries).
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start, end = slc.start, slc.stop
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start_idx = bisect.bisect_left(self.cal, pd.Timestamp(start))
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pad_start_idx = max(0, start_idx - self.step_len)
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pad_start = self.cal[pad_start_idx]
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# TSDatasetH will retrieve more data for complete
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data = super()._prepare_seg(slice(pad_start, end), **kwargs)
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return data
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def _prepare_seg(self, slc: slice, **kwargs) -> TSDataSampler:
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"""
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split the _prepare_raw_seg is to leave a hook for data preprocessing before creating processing data
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"""
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dtype = kwargs.pop("dtype", None)
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start, end = slc.start, slc.stop
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flt_col = kwargs.pop("flt_col", None)
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|
# TSDatasetH will retrieve more data for complete
|
|
data = self._prepare_raw_seg(slc, **kwargs)
|
|
|
|
flt_kwargs = deepcopy(kwargs)
|
|
if flt_col is not None:
|
|
flt_kwargs["col_set"] = flt_col
|
|
flt_data = self._prepare_raw_seg(slc, **flt_kwargs)
|
|
assert len(flt_data.columns) == 1
|
|
else:
|
|
flt_data = None
|
|
|
|
tsds = TSDataSampler(data=data, start=start, end=end, step_len=self.step_len, dtype=dtype, flt_data=flt_data)
|
|
return tsds
|