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Author SHA1 Message Date
Andrew Kane
52184bfa10 Improved performance of HNSW index scans from disk [skip ci] 2025-09-24 18:25:01 -07:00
15 changed files with 138 additions and 240 deletions

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@@ -30,7 +30,7 @@ jobs:
dev-files: true dev-files: true
- run: make - run: make
env: env:
PG_CFLAGS: -DUSE_ASSERT_CHECKING -Wall -Wextra -Werror -Wno-unused-parameter -Wno-sign-compare ${{ matrix.postgres >= 18 && '-Wno-missing-field-initializers' || '' }} PG_CFLAGS: ${{ matrix.postgres >= 18 && '-Wno-missing-field-initializers' || '' }} -DUSE_ASSERT_CHECKING -Wall -Wextra -Werror -Wno-unused-parameter -Wno-sign-compare
- run: | - run: |
export PG_CONFIG=`which pg_config` export PG_CONFIG=`which pg_config`
sudo --preserve-env=PG_CONFIG make install sudo --preserve-env=PG_CONFIG make install
@@ -48,7 +48,7 @@ jobs:
fail-fast: false fail-fast: false
matrix: matrix:
include: include:
- postgres: 18 - postgres: 17
os: macos-26 os: macos-26
- postgres: 14 - postgres: 14
os: macos-15-intel os: macos-15-intel
@@ -59,7 +59,7 @@ jobs:
postgres-version: ${{ matrix.postgres }} postgres-version: ${{ matrix.postgres }}
- run: make - run: make
env: env:
PG_CFLAGS: -DUSE_ASSERT_CHECKING -Wall -Wextra -Werror -Wno-unused-parameter -Wno-unknown-warning-option ${{ matrix.postgres >= 18 && '-Wno-missing-field-initializers' || '' }} PG_CFLAGS: -DUSE_ASSERT_CHECKING -Wall -Wextra -Werror -Wno-unused-parameter -Wno-unknown-warning-option
- run: make install - run: make install
- run: make installcheck - run: make installcheck
- if: ${{ failure() }} - if: ${{ failure() }}
@@ -72,7 +72,7 @@ jobs:
tar xf $TAG.tar.gz tar xf $TAG.tar.gz
mv postgres-$TAG postgres mv postgres-$TAG postgres
env: env:
TAG: ${{ matrix.postgres == 18 && 'REL_18_0' || 'REL_14_19' }} TAG: ${{ matrix.postgres == 17 && 'REL_17_6' || 'REL_14_19' }}
- run: make prove_installcheck PROVE_FLAGS="-I ./postgres/src/test/perl -I ./test/perl" - run: make prove_installcheck PROVE_FLAGS="-I ./postgres/src/test/perl -I ./test/perl"
env: env:
PERL5LIB: /Users/runner/perl5/lib/perl5 PERL5LIB: /Users/runner/perl5/lib/perl5
@@ -136,7 +136,7 @@ jobs:
- uses: actions/checkout@v5 - uses: actions/checkout@v5
- uses: ankane/setup-postgres-valgrind@v1 - uses: ankane/setup-postgres-valgrind@v1
with: with:
postgres-version: 18 postgres-version: 17
check-ub: yes check-ub: yes
- run: make OPTFLAGS="" - run: make OPTFLAGS=""
- run: sudo --preserve-env=PG_CONFIG make install - run: sudo --preserve-env=PG_CONFIG make install

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@@ -1,7 +1,6 @@
## 0.8.2 (unreleased) ## 0.8.2 (unreleased)
- Improved `install` target on Windows - Improved performance of HNSW index scans from disk
- Fixed `Index Searches` in `EXPLAIN` output for Postgres 18
## 0.8.1 (2025-09-04) ## 0.8.1 (2025-09-04)

View File

@@ -57,7 +57,7 @@ install: all
copy $(SHLIB) "$(PKGLIBDIR)" copy $(SHLIB) "$(PKGLIBDIR)"
copy $(EXTENSION).control "$(SHAREDIR)\extension" copy $(EXTENSION).control "$(SHAREDIR)\extension"
copy sql\$(EXTENSION)--*.sql "$(SHAREDIR)\extension" copy sql\$(EXTENSION)--*.sql "$(SHAREDIR)\extension"
if not exist "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)" mkdir "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)" mkdir "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
for %f in ($(HEADERS)) do copy %f "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)" for %f in ($(HEADERS)) do copy %f "$(INCLUDEDIR_SERVER)\extension\$(EXTENSION)"
installcheck: installcheck:

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@@ -36,7 +36,7 @@ You can also install it with [Docker](#docker), [Homebrew](#homebrew), [PGXN](#p
Ensure [C++ support in Visual Studio](https://learn.microsoft.com/en-us/cpp/build/building-on-the-command-line?view=msvc-170#download-and-install-the-tools) is installed and run `x64 Native Tools Command Prompt for VS [version]` as administrator. Then use `nmake` to build: Ensure [C++ support in Visual Studio](https://learn.microsoft.com/en-us/cpp/build/building-on-the-command-line?view=msvc-170#download-and-install-the-tools) is installed and run `x64 Native Tools Command Prompt for VS [version]` as administrator. Then use `nmake` to build:
```cmd ```cmd
set "PGROOT=C:\Program Files\PostgreSQL\18" set "PGROOT=C:\Program Files\PostgreSQL\17"
cd %TEMP% cd %TEMP%
git clone --branch v0.8.1 https://github.com/pgvector/pgvector.git git clone --branch v0.8.1 https://github.com/pgvector/pgvector.git
cd pgvector cd pgvector
@@ -695,10 +695,10 @@ CREATE INDEX CONCURRENTLY ...
### Querying ### Querying
Use `EXPLAIN (ANALYZE, BUFFERS)` to debug performance. Use `EXPLAIN ANALYZE` to debug performance.
```sql ```sql
EXPLAIN (ANALYZE, BUFFERS) SELECT * FROM items ORDER BY embedding <-> '[3,1,2]' LIMIT 5; EXPLAIN ANALYZE SELECT * FROM items ORDER BY embedding <-> '[3,1,2]' LIMIT 5;
``` ```
#### Exact Search #### Exact Search
@@ -771,7 +771,6 @@ Use pgvector from any language with a Postgres client. You can even generate and
Language | Libraries / Examples Language | Libraries / Examples
--- | --- --- | ---
Ada | [pgvector-ada](https://github.com/pgvector/pgvector-ada)
C | [pgvector-c](https://github.com/pgvector/pgvector-c) C | [pgvector-c](https://github.com/pgvector/pgvector-c)
C++ | [pgvector-cpp](https://github.com/pgvector/pgvector-cpp) C++ | [pgvector-cpp](https://github.com/pgvector/pgvector-cpp)
C#, F#, Visual Basic | [pgvector-dotnet](https://github.com/pgvector/pgvector-dotnet) C#, F#, Visual Basic | [pgvector-dotnet](https://github.com/pgvector/pgvector-dotnet)
@@ -791,7 +790,6 @@ Lisp | [pgvector-lisp](https://github.com/pgvector/pgvector-lisp)
Lua | [pgvector-lua](https://github.com/pgvector/pgvector-lua) Lua | [pgvector-lua](https://github.com/pgvector/pgvector-lua)
Nim | [pgvector-nim](https://github.com/pgvector/pgvector-nim) Nim | [pgvector-nim](https://github.com/pgvector/pgvector-nim)
OCaml | [pgvector-ocaml](https://github.com/pgvector/pgvector-ocaml) OCaml | [pgvector-ocaml](https://github.com/pgvector/pgvector-ocaml)
Pascal | [pgvector-pascal](https://github.com/pgvector/pgvector-pascal)
Perl | [pgvector-perl](https://github.com/pgvector/pgvector-perl) Perl | [pgvector-perl](https://github.com/pgvector/pgvector-perl)
PHP | [pgvector-php](https://github.com/pgvector/pgvector-php) PHP | [pgvector-php](https://github.com/pgvector/pgvector-php)
Python | [pgvector-python](https://github.com/pgvector/pgvector-python) Python | [pgvector-python](https://github.com/pgvector/pgvector-python)
@@ -814,7 +812,7 @@ Yes, pgvector uses the write-ahead log (WAL), which allows for replication and p
#### What if I want to index vectors with more than 2,000 dimensions? #### What if I want to index vectors with more than 2,000 dimensions?
You can use [half-precision vectors](#half-precision-vectors) or [half-precision indexing](#half-precision-indexing) to index up to 4,000 dimensions or [binary quantization](#binary-quantization) to index up to 64,000 dimensions. Other options are [indexing subvectors](#indexing-subvectors) (for models that support it) or [dimensionality reduction](https://en.wikipedia.org/wiki/Dimensionality_reduction). You can use [half-precision indexing](#half-precision-indexing) to index up to 4,000 dimensions or [binary quantization](#binary-quantization) to index up to 64,000 dimensions. Another option is [dimensionality reduction](https://en.wikipedia.org/wiki/Dimensionality_reduction).
#### Can I store vectors with different dimensions in the same column? #### Can I store vectors with different dimensions in the same column?
@@ -1066,7 +1064,7 @@ l2_normalize(sparsevec) → sparsevec | Normalize with Euclidean norm | 0.7.0
If your machine has multiple Postgres installations, specify the path to [pg_config](https://www.postgresql.org/docs/current/app-pgconfig.html) with: If your machine has multiple Postgres installations, specify the path to [pg_config](https://www.postgresql.org/docs/current/app-pgconfig.html) with:
```sh ```sh
export PG_CONFIG=/Library/PostgreSQL/18/bin/pg_config export PG_CONFIG=/Library/PostgreSQL/17/bin/pg_config
``` ```
Then re-run the installation instructions (run `make clean` before `make` if needed). If `sudo` is needed for `make install`, use: Then re-run the installation instructions (run `make clean` before `make` if needed). If `sudo` is needed for `make install`, use:
@@ -1077,11 +1075,11 @@ sudo --preserve-env=PG_CONFIG make install
A few common paths on Mac are: A few common paths on Mac are:
- EDB installer - `/Library/PostgreSQL/18/bin/pg_config` - EDB installer - `/Library/PostgreSQL/17/bin/pg_config`
- Homebrew (arm64) - `/opt/homebrew/opt/postgresql@18/bin/pg_config` - Homebrew (arm64) - `/opt/homebrew/opt/postgresql@17/bin/pg_config`
- Homebrew (x86-64) - `/usr/local/opt/postgresql@18/bin/pg_config` - Homebrew (x86-64) - `/usr/local/opt/postgresql@17/bin/pg_config`
Note: Replace `18` with your Postgres server version Note: Replace `17` with your Postgres server version
### Missing Header ### Missing Header
@@ -1090,10 +1088,10 @@ If compilation fails with `fatal error: postgres.h: No such file or directory`,
For Ubuntu and Debian, use: For Ubuntu and Debian, use:
```sh ```sh
sudo apt install postgresql-server-dev-18 sudo apt install postgresql-server-dev-17
``` ```
Note: Replace `18` with your Postgres server version Note: Replace `17` with your Postgres server version
### Missing SDK ### Missing SDK
@@ -1140,15 +1138,13 @@ If installation fails with `Access is denied`, re-run the installation instructi
Get the [Docker image](https://hub.docker.com/r/pgvector/pgvector) with: Get the [Docker image](https://hub.docker.com/r/pgvector/pgvector) with:
```sh ```sh
docker pull pgvector/pgvector:pg18-trixie docker pull pgvector/pgvector:pg17-trixie
``` ```
This adds pgvector to the [Postgres image](https://hub.docker.com/_/postgres) (replace `18` with your Postgres server version, and run it the same way). This adds pgvector to the [Postgres image](https://hub.docker.com/_/postgres) (replace `17` with your Postgres server version, and run it the same way).
Supported tags are: Supported tags are:
- `pg18-trixie`, `0.8.1-pg18-trixie`
- `pg18-bookworm`, `0.8.1-pg18-bookworm`, `pg18`, `0.8.1-pg18`
- `pg17-trixie`, `0.8.1-pg17-trixie` - `pg17-trixie`, `0.8.1-pg17-trixie`
- `pg17-bookworm`, `0.8.1-pg17-bookworm`, `pg17`, `0.8.1-pg17` - `pg17-bookworm`, `0.8.1-pg17-bookworm`, `pg17`, `0.8.1-pg17`
- `pg16-trixie`, `0.8.1-pg16-trixie` - `pg16-trixie`, `0.8.1-pg16-trixie`
@@ -1165,7 +1161,7 @@ You can also build the image manually:
```sh ```sh
git clone --branch v0.8.1 https://github.com/pgvector/pgvector.git git clone --branch v0.8.1 https://github.com/pgvector/pgvector.git
cd pgvector cd pgvector
docker build --pull --build-arg PG_MAJOR=18 -t myuser/pgvector . docker build --pull --build-arg PG_MAJOR=17 -t myuser/pgvector .
``` ```
If you increase `maintenance_work_mem`, make sure `--shm-size` is at least that size to avoid an error with parallel HNSW index builds. If you increase `maintenance_work_mem`, make sure `--shm-size` is at least that size to avoid an error with parallel HNSW index builds.
@@ -1182,7 +1178,7 @@ With Homebrew Postgres, you can use:
brew install pgvector brew install pgvector
``` ```
Note: This only adds it to the `postgresql@18` and `postgresql@17` formulas Note: This only adds it to the `postgresql@17` and `postgresql@14` formulas
### PGXN ### PGXN
@@ -1197,22 +1193,22 @@ pgxn install vector
Debian and Ubuntu packages are available from the [PostgreSQL APT Repository](https://wiki.postgresql.org/wiki/Apt). Follow the [setup instructions](https://wiki.postgresql.org/wiki/Apt#Quickstart) and run: Debian and Ubuntu packages are available from the [PostgreSQL APT Repository](https://wiki.postgresql.org/wiki/Apt). Follow the [setup instructions](https://wiki.postgresql.org/wiki/Apt#Quickstart) and run:
```sh ```sh
sudo apt install postgresql-18-pgvector sudo apt install postgresql-17-pgvector
``` ```
Note: Replace `18` with your Postgres server version Note: Replace `17` with your Postgres server version
### Yum ### Yum
RPM packages are available from the [PostgreSQL Yum Repository](https://yum.postgresql.org/). Follow the [setup instructions](https://www.postgresql.org/download/linux/redhat/) for your distribution and run: RPM packages are available from the [PostgreSQL Yum Repository](https://yum.postgresql.org/). Follow the [setup instructions](https://www.postgresql.org/download/linux/redhat/) for your distribution and run:
```sh ```sh
sudo yum install pgvector_18 sudo yum install pgvector_17
# or # or
sudo dnf install pgvector_18 sudo dnf install pgvector_17
``` ```
Note: Replace `18` with your Postgres server version Note: Replace `17` with your Postgres server version
### pkg ### pkg
@@ -1271,6 +1267,7 @@ Thanks to:
- [k-means++: The Advantage of Careful Seeding](https://theory.stanford.edu/~sergei/papers/kMeansPP-soda.pdf) - [k-means++: The Advantage of Careful Seeding](https://theory.stanford.edu/~sergei/papers/kMeansPP-soda.pdf)
- [Concept Decompositions for Large Sparse Text Data using Clustering](https://www.cs.utexas.edu/users/inderjit/public_papers/concept_mlj.pdf) - [Concept Decompositions for Large Sparse Text Data using Clustering](https://www.cs.utexas.edu/users/inderjit/public_papers/concept_mlj.pdf)
- [Efficient and Robust Approximate Nearest Neighbor Search using Hierarchical Navigable Small World Graphs](https://arxiv.org/ftp/arxiv/papers/1603/1603.09320.pdf) - [Efficient and Robust Approximate Nearest Neighbor Search using Hierarchical Navigable Small World Graphs](https://arxiv.org/ftp/arxiv/papers/1603/1603.09320.pdf)
- [Turbocharging Vector Databases using Modern SSDs](https://www.vldb.org/pvldb/volumes/18/paper/Turbocharging%20Vector%20Databases%20using%20Modern%20SSDs)
## History ## History

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@@ -362,13 +362,6 @@ typedef union
ItemPointerData indextid; ItemPointerData indextid;
} HnswUnvisited; } HnswUnvisited;
typedef struct HnswReadStreamData
{
HnswUnvisited *unvisited;
int unvisitedLength;
int visited;
} HnswReadStreamData;
typedef struct HnswScanOpaqueData typedef struct HnswScanOpaqueData
{ {
const HnswTypeInfo *typeInfo; const HnswTypeInfo *typeInfo;
@@ -424,13 +417,13 @@ bool HnswCheckNorm(HnswSupport * support, Datum value);
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum); Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
void HnswInitPage(Buffer buf, Page page); void HnswInitPage(Buffer buf, Page page);
void HnswInit(void); void HnswInit(void);
List *HnswSearchLayer(char *base, HnswQuery * q, List *ep, int ef, int lc, Relation index, HnswSupport * support, int m, bool inserting, HnswElement skipElement, visited_hash * v, pairingheap **discarded, bool initVisited, int64 *tuples, bool maintenance); List *HnswSearchLayer(char *base, HnswQuery * q, List *ep, int ef, int lc, Relation index, HnswSupport * support, int m, bool inserting, HnswElement skipElement, visited_hash * v, pairingheap **discarded, bool initVisited, int64 *tuples);
HnswElement HnswGetEntryPoint(Relation index); HnswElement HnswGetEntryPoint(Relation index);
void HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint); void HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint);
void *HnswAlloc(HnswAllocator * allocator, Size size); void *HnswAlloc(HnswAllocator * allocator, Size size);
HnswElement HnswInitElement(char *base, ItemPointer tid, int m, double ml, int maxLevel, HnswAllocator * alloc); HnswElement HnswInitElement(char *base, ItemPointer tid, int m, double ml, int maxLevel, HnswAllocator * alloc);
HnswElement HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno); HnswElement HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno);
void HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint, Relation index, HnswSupport * support, int m, int efConstruction, bool existing, bool maintenance); void HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint, Relation index, HnswSupport * support, int m, int efConstruction, bool existing);
HnswSearchCandidate *HnswEntryCandidate(char *base, HnswElement em, HnswQuery * q, Relation rel, HnswSupport * support, bool loadVec); HnswSearchCandidate *HnswEntryCandidate(char *base, HnswElement em, HnswQuery * q, Relation rel, HnswSupport * support, bool loadVec);
void HnswUpdateMetaPage(Relation index, int updateEntry, HnswElement entryPoint, BlockNumber insertPage, ForkNumber forkNum, bool building); void HnswUpdateMetaPage(Relation index, int updateEntry, HnswElement entryPoint, BlockNumber insertPage, ForkNumber forkNum, bool building);
void HnswSetNeighborTuple(char *base, HnswNeighborTuple ntup, HnswElement e, int m); void HnswSetNeighborTuple(char *base, HnswNeighborTuple ntup, HnswElement e, int m);

View File

@@ -54,10 +54,6 @@
#include "utils/datum.h" #include "utils/datum.h"
#include "utils/memutils.h" #include "utils/memutils.h"
#if PG_VERSION_NUM >= 160000
#include "varatt.h"
#endif
#if PG_VERSION_NUM >= 140000 #if PG_VERSION_NUM >= 140000
#include "utils/backend_progress.h" #include "utils/backend_progress.h"
#else #else
@@ -135,6 +131,69 @@ HnswBuildAppendPage(Relation index, Buffer *buf, Page *page, ForkNumber forkNum)
HnswInitPage(*buf, *page); HnswInitPage(*buf, *page);
} }
static void
WriteElement(char *base, HnswElement element, HnswElementTuple etup, HnswNeighborTuple ntup, HnswBuildState * buildstate, Size maxSize, Buffer *buf, Page *page, Relation index, ForkNumber forkNum)
{
Size etupSize;
Size ntupSize;
Size combinedSize;
Pointer valuePtr;
/* Skip if already added */
if (BlockNumberIsValid(element->neighborPage))
return;
valuePtr = HnswPtrAccess(base, element->value);
/* Zero memory for each element */
MemSet(etup, 0, HNSW_TUPLE_ALLOC_SIZE);
/* Calculate sizes */
etupSize = HNSW_ELEMENT_TUPLE_SIZE(VARSIZE_ANY(valuePtr));
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, buildstate->m);
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
/* Initial size check */
if (etupSize > HNSW_TUPLE_ALLOC_SIZE)
ereport(ERROR,
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
errmsg("index tuple too large")));
HnswSetElementTuple(base, etup, element);
/* Keep element and neighbors on the same page if possible */
if (PageGetFreeSpace(*page) < etupSize || (combinedSize <= maxSize && PageGetFreeSpace(*page) < combinedSize))
HnswBuildAppendPage(index, buf, page, forkNum);
/* Calculate offsets */
element->blkno = BufferGetBlockNumber(*buf);
element->offno = OffsetNumberNext(PageGetMaxOffsetNumber(*page));
if (combinedSize <= maxSize)
{
element->neighborPage = element->blkno;
element->neighborOffno = OffsetNumberNext(element->offno);
}
else
{
element->neighborPage = element->blkno + 1;
element->neighborOffno = FirstOffsetNumber;
}
ItemPointerSet(&etup->neighbortid, element->neighborPage, element->neighborOffno);
/* Add element */
if (PageAddItem(*page, (Item) etup, etupSize, InvalidOffsetNumber, false, false) != element->offno)
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Add new page if needed */
if (PageGetFreeSpace(*page) < ntupSize)
HnswBuildAppendPage(index, buf, page, forkNum);
/* Add placeholder for neighbors */
if (PageAddItem(*page, (Item) ntup, ntupSize, InvalidOffsetNumber, false, false) != element->neighborOffno)
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
}
/* /*
* Create graph pages * Create graph pages
*/ */
@@ -168,61 +227,24 @@ CreateGraphPages(HnswBuildState * buildstate)
while (!HnswPtrIsNull(base, iter)) while (!HnswPtrIsNull(base, iter))
{ {
HnswElement element = HnswPtrAccess(base, iter); HnswElement element = HnswPtrAccess(base, iter);
Size etupSize;
Size ntupSize;
Size combinedSize;
Pointer valuePtr = HnswPtrAccess(base, element->value);
/* Update iterator */ /* Update iterator */
iter = element->next; iter = element->next;
/* Zero memory for each element */ WriteElement(base, element, etup, ntup, buildstate, maxSize, &buf, &page, index, forkNum);
MemSet(etup, 0, HNSW_TUPLE_ALLOC_SIZE);
/* Calculate sizes */ for (int lc = element->level; lc >= 0; lc--)
etupSize = HNSW_ELEMENT_TUPLE_SIZE(VARSIZE_ANY(valuePtr));
ntupSize = HNSW_NEIGHBOR_TUPLE_SIZE(element->level, buildstate->m);
combinedSize = etupSize + ntupSize + sizeof(ItemIdData);
/* Initial size check */
if (etupSize > HNSW_TUPLE_ALLOC_SIZE)
ereport(ERROR,
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
errmsg("index tuple too large")));
HnswSetElementTuple(base, etup, element);
/* Keep element and neighbors on the same page if possible */
if (PageGetFreeSpace(page) < etupSize || (combinedSize <= maxSize && PageGetFreeSpace(page) < combinedSize))
HnswBuildAppendPage(index, &buf, &page, forkNum);
/* Calculate offsets */
element->blkno = BufferGetBlockNumber(buf);
element->offno = OffsetNumberNext(PageGetMaxOffsetNumber(page));
if (combinedSize <= maxSize)
{ {
element->neighborPage = element->blkno; HnswNeighborArray *neighbors = HnswGetNeighbors(base, element, lc);
element->neighborOffno = OffsetNumberNext(element->offno);
for (int i = 0; i < neighbors->length; i++)
{
HnswCandidate *hc = &neighbors->items[i];
HnswElement hce = HnswPtrAccess(base, hc->element);
WriteElement(base, hce, etup, ntup, buildstate, maxSize, &buf, &page, index, forkNum);
}
} }
else
{
element->neighborPage = element->blkno + 1;
element->neighborOffno = FirstOffsetNumber;
}
ItemPointerSet(&etup->neighbortid, element->neighborPage, element->neighborOffno);
/* Add element */
if (PageAddItem(page, (Item) etup, etupSize, InvalidOffsetNumber, false, false) != element->offno)
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
/* Add new page if needed */
if (PageGetFreeSpace(page) < ntupSize)
HnswBuildAppendPage(index, &buf, &page, forkNum);
/* Add placeholder for neighbors */
if (PageAddItem(page, (Item) ntup, ntupSize, InvalidOffsetNumber, false, false) != element->neighborOffno)
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
} }
insertPage = BufferGetBlockNumber(buf); insertPage = BufferGetBlockNumber(buf);
@@ -402,7 +424,7 @@ UpdateNeighborsInMemory(char *base, HnswSupport * support, HnswElement e, int m)
* Update graph in memory * Update graph in memory
*/ */
static void static void
UpdateGraphInMemory(HnswSupport * support, HnswElement element, int m, HnswElement entryPoint, HnswBuildState * buildstate) UpdateGraphInMemory(HnswSupport * support, HnswElement element, int m, int efConstruction, HnswElement entryPoint, HnswBuildState * buildstate)
{ {
HnswGraph *graph = buildstate->graph; HnswGraph *graph = buildstate->graph;
char *base = buildstate->hnswarea; char *base = buildstate->hnswarea;
@@ -461,10 +483,10 @@ InsertTupleInMemory(HnswBuildState * buildstate, HnswElement element)
} }
/* Find neighbors for element */ /* Find neighbors for element */
HnswFindElementNeighbors(base, element, entryPoint, NULL, support, m, efConstruction, false, true); HnswFindElementNeighbors(base, element, entryPoint, NULL, support, m, efConstruction, false);
/* Update graph in memory */ /* Update graph in memory */
UpdateGraphInMemory(support, element, m, entryPoint, buildstate); UpdateGraphInMemory(support, element, m, efConstruction, entryPoint, buildstate);
/* Release entry lock */ /* Release entry lock */
LWLockRelease(entryLock); LWLockRelease(entryLock);
@@ -1058,7 +1080,7 @@ ComputeParallelWorkers(Relation heap, Relation index)
* Build graph * Build graph
*/ */
static void static void
BuildGraph(HnswBuildState * buildstate) BuildGraph(HnswBuildState * buildstate, ForkNumber forkNum)
{ {
int parallel_workers = 0; int parallel_workers = 0;
@@ -1106,7 +1128,7 @@ BuildIndex(Relation heap, Relation index, IndexInfo *indexInfo,
InitBuildState(buildstate, heap, index, indexInfo, forkNum); InitBuildState(buildstate, heap, index, indexInfo, forkNum);
BuildGraph(buildstate); BuildGraph(buildstate, forkNum);
if (RelationNeedsWAL(index) || forkNum == INIT_FORKNUM) if (RelationNeedsWAL(index) || forkNum == INIT_FORKNUM)
log_newpage_range(index, forkNum, 0, RelationGetNumberOfBlocksInFork(index, forkNum), true); log_newpage_range(index, forkNum, 0, RelationGetNumberOfBlocksInFork(index, forkNum), true);

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@@ -9,10 +9,6 @@
#include "utils/datum.h" #include "utils/datum.h"
#include "utils/memutils.h" #include "utils/memutils.h"
#if PG_VERSION_NUM >= 160000
#include "varatt.h"
#endif
/* /*
* Get the insert page * Get the insert page
*/ */
@@ -664,7 +660,7 @@ FindDuplicateOnDisk(Relation index, HnswElement element, bool building)
* Update graph on disk * Update graph on disk
*/ */
static void static void
UpdateGraphOnDisk(Relation index, HnswSupport * support, HnswElement element, int m, HnswElement entryPoint, bool building) UpdateGraphOnDisk(Relation index, HnswSupport * support, HnswElement element, int m, int efConstruction, HnswElement entryPoint, bool building)
{ {
BlockNumber newInsertPage = InvalidBlockNumber; BlockNumber newInsertPage = InvalidBlockNumber;
@@ -729,10 +725,10 @@ HnswInsertTupleOnDisk(Relation index, HnswSupport * support, Datum value, ItemPo
} }
/* Find neighbors for element */ /* Find neighbors for element */
HnswFindElementNeighbors(base, element, entryPoint, index, support, m, efConstruction, false, building); HnswFindElementNeighbors(base, element, entryPoint, index, support, m, efConstruction, false);
/* Update graph on disk */ /* Update graph on disk */
UpdateGraphOnDisk(index, support, element, m, entryPoint, building); UpdateGraphOnDisk(index, support, element, m, efConstruction, entryPoint, building);
/* Release lock */ /* Release lock */
UnlockPage(index, HNSW_UPDATE_LOCK, lockmode); UnlockPage(index, HNSW_UPDATE_LOCK, lockmode);

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@@ -37,11 +37,11 @@ GetScanItems(IndexScanDesc scan, Datum value)
for (int lc = entryPoint->level; lc >= 1; lc--) for (int lc = entryPoint->level; lc >= 1; lc--)
{ {
w = HnswSearchLayer(base, q, ep, 1, lc, index, support, m, false, NULL, NULL, NULL, true, NULL, false); w = HnswSearchLayer(base, q, ep, 1, lc, index, support, m, false, NULL, NULL, NULL, true, NULL);
ep = w; ep = w;
} }
return HnswSearchLayer(base, q, ep, hnsw_ef_search, 0, index, support, m, false, NULL, &so->v, hnsw_iterative_scan != HNSW_ITERATIVE_SCAN_OFF ? &so->discarded : NULL, true, &so->tuples, false); return HnswSearchLayer(base, q, ep, hnsw_ef_search, 0, index, support, m, false, NULL, &so->v, hnsw_iterative_scan != HNSW_ITERATIVE_SCAN_OFF ? &so->discarded : NULL, true, &so->tuples);
} }
/* /*
@@ -72,7 +72,7 @@ ResumeScanItems(IndexScanDesc scan)
ep = lappend(ep, sc); ep = lappend(ep, sc);
} }
return HnswSearchLayer(base, &so->q, ep, batch_size, 0, index, &so->support, so->m, false, NULL, &so->v, &so->discarded, false, &so->tuples, false); return HnswSearchLayer(base, &so->q, ep, batch_size, 0, index, &so->support, so->m, false, NULL, &so->v, &so->discarded, false, &so->tuples);
} }
/* /*
@@ -193,10 +193,6 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
/* Count index scan for stats */ /* Count index scan for stats */
pgstat_count_index_scan(scan->indexRelation); pgstat_count_index_scan(scan->indexRelation);
#if PG_VERSION_NUM >= 180000
if (scan->instrument)
scan->instrument->nsearches++;
#endif
/* Safety check */ /* Safety check */
if (scan->orderByData == NULL) if (scan->orderByData == NULL)

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@@ -15,14 +15,6 @@
#include "utils/memdebug.h" #include "utils/memdebug.h"
#include "utils/rel.h" #include "utils/rel.h"
#if PG_VERSION_NUM >= 160000
#include "varatt.h"
#endif
#if PG_VERSION_NUM >= 170000
#include "storage/read_stream.h"
#endif
#if PG_VERSION_NUM < 170000 #if PG_VERSION_NUM < 170000
static inline uint64 static inline uint64
murmurhash64(uint64 data) murmurhash64(uint64 data)
@@ -261,6 +253,7 @@ HnswInitElement(char *base, ItemPointer heaptid, int m, double ml, int maxLevel,
element->deleted = 0; element->deleted = 0;
/* Start at one to make it easier to find issues */ /* Start at one to make it easier to find issues */
element->version = 1; element->version = 1;
element->neighborPage = InvalidBlockNumber;
HnswInitNeighbors(base, element, m, allocator); HnswInitNeighbors(base, element, m, allocator);
@@ -533,12 +526,14 @@ HnswGetDistance(Datum a, Datum b, HnswSupport * support)
* Load an element and optionally get its distance from q * Load an element and optionally get its distance from q
*/ */
static void static void
HnswLoadElementImpl(Buffer buf, OffsetNumber offno, double *distance, HnswQuery * q, Relation index, HnswSupport * support, bool loadVec, double *maxDistance, HnswElement * element) HnswLoadElementImpl(BlockNumber blkno, OffsetNumber offno, double *distance, HnswQuery * q, Relation index, HnswSupport * support, bool loadVec, double *maxDistance, HnswElement * element)
{ {
Buffer buf;
Page page; Page page;
HnswElementTuple etup; HnswElementTuple etup;
/* Read vector */ /* Read vector */
buf = ReadBuffer(index, blkno);
LockBuffer(buf, BUFFER_LOCK_SHARE); LockBuffer(buf, BUFFER_LOCK_SHARE);
page = BufferGetPage(buf); page = BufferGetPage(buf);
@@ -559,7 +554,7 @@ HnswLoadElementImpl(Buffer buf, OffsetNumber offno, double *distance, HnswQuery
if (distance == NULL || maxDistance == NULL || *distance < *maxDistance) if (distance == NULL || maxDistance == NULL || *distance < *maxDistance)
{ {
if (*element == NULL) if (*element == NULL)
*element = HnswInitElementFromBlock(BufferGetBlockNumber(buf), offno); *element = HnswInitElementFromBlock(blkno, offno);
HnswLoadElementFromTuple(*element, etup, true, loadVec); HnswLoadElementFromTuple(*element, etup, true, loadVec);
} }
@@ -573,9 +568,7 @@ HnswLoadElementImpl(Buffer buf, OffsetNumber offno, double *distance, HnswQuery
void void
HnswLoadElement(HnswElement element, double *distance, HnswQuery * q, Relation index, HnswSupport * support, bool loadVec, double *maxDistance) HnswLoadElement(HnswElement element, double *distance, HnswQuery * q, Relation index, HnswSupport * support, bool loadVec, double *maxDistance)
{ {
Buffer buf = ReadBuffer(index, element->blkno); HnswLoadElementImpl(element->blkno, element->offno, distance, q, index, support, loadVec, maxDistance, &element);
HnswLoadElementImpl(buf, element->offno, distance, q, index, support, loadVec, maxDistance, &element);
} }
/* /*
@@ -815,31 +808,11 @@ HnswLoadUnvisitedFromDisk(HnswElement element, HnswUnvisited * unvisited, int *u
} }
} }
#if PG_VERSION_NUM >= 170000
/*
* Get next block number for read stream
*/
static BlockNumber
HnswReadStreamNextBlock(ReadStream *stream, void *callback_private_data, void *per_buffer_data)
{
HnswReadStreamData *streamData = callback_private_data;
OffsetNumber *offno = per_buffer_data;
HnswUnvisited *uv;
if (streamData->visited == streamData->unvisitedLength)
return InvalidBlockNumber;
uv = &streamData->unvisited[streamData->visited++];
*offno = ItemPointerGetOffsetNumber(&uv->indextid);
return ItemPointerGetBlockNumber(&uv->indextid);
}
#endif
/* /*
* Algorithm 2 from paper * Algorithm 2 from paper
*/ */
List * List *
HnswSearchLayer(char *base, HnswQuery * q, List *ep, int ef, int lc, Relation index, HnswSupport * support, int m, bool inserting, HnswElement skipElement, visited_hash * v, pairingheap **discarded, bool initVisited, int64 *tuples, bool maintenance) HnswSearchLayer(char *base, HnswQuery * q, List *ep, int ef, int lc, Relation index, HnswSupport * support, int m, bool inserting, HnswElement skipElement, visited_hash * v, pairingheap **discarded, bool initVisited, int64 *tuples)
{ {
List *w = NIL; List *w = NIL;
pairingheap *C = pairingheap_allocate(CompareNearestCandidates, NULL); pairingheap *C = pairingheap_allocate(CompareNearestCandidates, NULL);
@@ -854,27 +827,6 @@ HnswSearchLayer(char *base, HnswQuery * q, List *ep, int ef, int lc, Relation in
int unvisitedLength; int unvisitedLength;
bool inMemory = index == NULL; bool inMemory = index == NULL;
#if PG_VERSION_NUM >= 170000
HnswReadStreamData streamData;
ReadStream *stream = NULL;
if (!inMemory)
{
int flags = READ_STREAM_DEFAULT;
if (maintenance)
{
flags |= READ_STREAM_MAINTENANCE;
}
#if PG_VERSION_NUM >= 180000
flags |= READ_STREAM_USE_BATCHING;
#endif
stream = read_stream_begin_relation(flags, NULL, index, MAIN_FORKNUM, HnswReadStreamNextBlock, &streamData, sizeof(OffsetNumber));
}
#endif
if (v == NULL) if (v == NULL)
{ {
v = &vh; v = &vh;
@@ -937,23 +889,13 @@ HnswSearchLayer(char *base, HnswQuery * q, List *ep, int ef, int lc, Relation in
if (inMemory) if (inMemory)
HnswLoadUnvisitedFromMemory(base, cElement, unvisited, &unvisitedLength, v, lc, localNeighborhood, neighborhoodSize); HnswLoadUnvisitedFromMemory(base, cElement, unvisited, &unvisitedLength, v, lc, localNeighborhood, neighborhoodSize);
else else
{
HnswLoadUnvisitedFromDisk(cElement, unvisited, &unvisitedLength, v, index, m, lm, lc); HnswLoadUnvisitedFromDisk(cElement, unvisited, &unvisitedLength, v, index, m, lm, lc);
#if PG_VERSION_NUM >= 170000
read_stream_resume(stream);
streamData.unvisited = unvisited;
streamData.unvisitedLength = unvisitedLength;
streamData.visited = 0;
#endif
}
/* OK to count elements instead of tuples */ /* OK to count elements instead of tuples */
if (tuples != NULL) if (tuples != NULL)
(*tuples) += unvisitedLength; (*tuples) += unvisitedLength;
for (int i = 0;; i++) for (int i = 0; i < unvisitedLength; i++)
{ {
HnswElement eElement; HnswElement eElement;
HnswSearchCandidate *e; HnswSearchCandidate *e;
@@ -964,40 +906,18 @@ HnswSearchLayer(char *base, HnswQuery * q, List *ep, int ef, int lc, Relation in
if (inMemory) if (inMemory)
{ {
if (i == unvisitedLength)
break;
eElement = unvisited[i].element; eElement = unvisited[i].element;
eDistance = GetElementDistance(base, eElement, q, support); eDistance = GetElementDistance(base, eElement, q, support);
} }
else else
{ {
Buffer buf; ItemPointer indextid = &unvisited[i].indextid;
OffsetNumber offno; BlockNumber blkno = ItemPointerGetBlockNumber(indextid);
OffsetNumber offno = ItemPointerGetOffsetNumber(indextid);
#if PG_VERSION_NUM >= 170000
void *offnoPtr;
buf = read_stream_next_buffer(stream, &offnoPtr);
if (!BufferIsValid(buf))
break;
offno = *((OffsetNumber *) offnoPtr);
#else
ItemPointer indextid;
if (i == unvisitedLength)
break;
indextid = &unvisited[i].indextid;
buf = ReadBuffer(index, ItemPointerGetBlockNumber(indextid));
offno = ItemPointerGetOffsetNumber(indextid);
#endif
/* Avoid any allocations if not adding */ /* Avoid any allocations if not adding */
eElement = NULL; eElement = NULL;
HnswLoadElementImpl(buf, offno, &eDistance, q, index, support, inserting, alwaysAdd || discarded != NULL ? NULL : &f->distance, &eElement); HnswLoadElementImpl(blkno, offno, &eDistance, q, index, support, inserting, alwaysAdd || discarded != NULL ? NULL : &f->distance, &eElement);
if (eElement == NULL) if (eElement == NULL)
continue; continue;
@@ -1053,11 +973,6 @@ HnswSearchLayer(char *base, HnswQuery * q, List *ep, int ef, int lc, Relation in
w = lappend(w, sc); w = lappend(w, sc);
} }
#if PG_VERSION_NUM >= 170000
if (!inMemory)
read_stream_end(stream);
#endif
return w; return w;
} }
@@ -1353,7 +1268,7 @@ PrecomputeHash(char *base, HnswElement element)
* Algorithm 1 from paper * Algorithm 1 from paper
*/ */
void void
HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint, Relation index, HnswSupport * support, int m, int efConstruction, bool existing, bool maintenance) HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint, Relation index, HnswSupport * support, int m, int efConstruction, bool existing)
{ {
List *ep; List *ep;
List *w; List *w;
@@ -1380,7 +1295,7 @@ HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint
/* 1st phase: greedy search to insert level */ /* 1st phase: greedy search to insert level */
for (int lc = entryLevel; lc >= level + 1; lc--) for (int lc = entryLevel; lc >= level + 1; lc--)
{ {
w = HnswSearchLayer(base, &q, ep, 1, lc, index, support, m, true, skipElement, NULL, NULL, true, NULL, maintenance); w = HnswSearchLayer(base, &q, ep, 1, lc, index, support, m, true, skipElement, NULL, NULL, true, NULL);
ep = w; ep = w;
} }
@@ -1399,7 +1314,7 @@ HnswFindElementNeighbors(char *base, HnswElement element, HnswElement entryPoint
List *lw = NIL; List *lw = NIL;
ListCell *lc2; ListCell *lc2;
w = HnswSearchLayer(base, &q, ep, efConstruction, lc, index, support, m, true, skipElement, NULL, NULL, true, NULL, maintenance); w = HnswSearchLayer(base, &q, ep, efConstruction, lc, index, support, m, true, skipElement, NULL, NULL, true, NULL);
/* Convert search candidates to candidates */ /* Convert search candidates to candidates */
foreach(lc2, w) foreach(lc2, w)

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@@ -9,10 +9,6 @@
#include "storage/lmgr.h" #include "storage/lmgr.h"
#include "utils/memutils.h" #include "utils/memutils.h"
#if PG_VERSION_NUM >= 160000
#include "varatt.h"
#endif
#if PG_VERSION_NUM >= 180000 #if PG_VERSION_NUM >= 180000
#define vacuum_delay_point() vacuum_delay_point(false) #define vacuum_delay_point() vacuum_delay_point(false)
#endif #endif
@@ -212,7 +208,7 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
element->heaptidsLength = 0; element->heaptidsLength = 0;
/* Find neighbors for element, skipping itself */ /* Find neighbors for element, skipping itself */
HnswFindElementNeighbors(base, element, entryPoint, index, support, m, efConstruction, true, true); HnswFindElementNeighbors(base, element, entryPoint, index, support, m, efConstruction, true);
/* Zero memory for each element */ /* Zero memory for each element */
MemSet(ntup, 0, HNSW_TUPLE_ALLOC_SIZE); MemSet(ntup, 0, HNSW_TUPLE_ALLOC_SIZE);

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@@ -20,10 +20,6 @@
#include "utils/memutils.h" #include "utils/memutils.h"
#include "vector.h" #include "vector.h"
#if PG_VERSION_NUM >= 160000
#include "varatt.h"
#endif
#if PG_VERSION_NUM >= 140000 #if PG_VERSION_NUM >= 140000
#include "utils/backend_progress.h" #include "utils/backend_progress.h"
#else #else
@@ -142,7 +138,7 @@ SampleRows(IvfflatBuildState * buildstate)
* Add tuple to sort * Add tuple to sort
*/ */
static void static void
AddTupleToSort(ItemPointer tid, Datum *values, IvfflatBuildState * buildstate) AddTupleToSort(Relation index, ItemPointer tid, Datum *values, IvfflatBuildState * buildstate)
{ {
double distance; double distance;
double minDistance = DBL_MAX; double minDistance = DBL_MAX;
@@ -219,7 +215,7 @@ BuildCallback(Relation index, ItemPointer tid, Datum *values,
oldCtx = MemoryContextSwitchTo(buildstate->tmpCtx); oldCtx = MemoryContextSwitchTo(buildstate->tmpCtx);
/* Add tuple to sort */ /* Add tuple to sort */
AddTupleToSort(tid, values, buildstate); AddTupleToSort(index, tid, values, buildstate);
/* Reset memory context */ /* Reset memory context */
MemoryContextSwitchTo(oldCtx); MemoryContextSwitchTo(oldCtx);
@@ -474,8 +470,8 @@ CreateMetaPage(Relation index, int dimensions, int lists, ForkNumber forkNum)
* Create list pages * Create list pages
*/ */
static void static void
CreateListPages(Relation index, VectorArray centers, int lists, CreateListPages(Relation index, VectorArray centers, int dimensions,
ForkNumber forkNum, ListInfo * *listInfo) int lists, ForkNumber forkNum, ListInfo * *listInfo)
{ {
Buffer buf; Buffer buf;
Page page; Page page;
@@ -1008,7 +1004,7 @@ BuildIndex(Relation heap, Relation index, IndexInfo *indexInfo,
/* Create pages */ /* Create pages */
CreateMetaPage(index, buildstate->dimensions, buildstate->lists, forkNum); CreateMetaPage(index, buildstate->dimensions, buildstate->lists, forkNum);
CreateListPages(index, buildstate->centers, buildstate->lists, forkNum, &buildstate->listInfo); CreateListPages(index, buildstate->centers, buildstate->dimensions, buildstate->lists, forkNum, &buildstate->listInfo);
CreateEntryPages(buildstate, forkNum); CreateEntryPages(buildstate, forkNum);
/* Write WAL for initialization fork since GenericXLog functions do not */ /* Write WAL for initialization fork since GenericXLog functions do not */

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@@ -13,10 +13,6 @@
#include "utils/tuplesort.h" #include "utils/tuplesort.h"
#include "vector.h" #include "vector.h"
#if PG_VERSION_NUM >= 160000
#include "varatt.h"
#endif
#if PG_VERSION_NUM >= 150000 #if PG_VERSION_NUM >= 150000
#include "common/pg_prng.h" #include "common/pg_prng.h"
#endif #endif

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@@ -65,7 +65,7 @@ FindInsertPage(Relation index, Datum *values, BlockNumber *insertPage, ListInfo
* Insert a tuple into the index * Insert a tuple into the index
*/ */
static void static void
InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid) InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel)
{ {
const IvfflatTypeInfo *typeInfo = IvfflatGetTypeInfo(index); const IvfflatTypeInfo *typeInfo = IvfflatGetTypeInfo(index);
IndexTuple itup; IndexTuple itup;
@@ -204,7 +204,7 @@ ivfflatinsert(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid,
oldCtx = MemoryContextSwitchTo(insertCtx); oldCtx = MemoryContextSwitchTo(insertCtx);
/* Insert tuple */ /* Insert tuple */
InsertTuple(index, values, isnull, heap_tid); InsertTuple(index, values, isnull, heap_tid, heap);
/* Delete memory context */ /* Delete memory context */
MemoryContextSwitchTo(oldCtx); MemoryContextSwitchTo(oldCtx);

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@@ -13,10 +13,6 @@
#include "utils/memutils.h" #include "utils/memutils.h"
#include "vector.h" #include "vector.h"
#if PG_VERSION_NUM >= 160000
#include "varatt.h"
#endif
/* /*
* Initialize with kmeans++ * Initialize with kmeans++
* *

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@@ -355,10 +355,6 @@ ivfflatgettuple(IndexScanDesc scan, ScanDirection dir)
/* Count index scan for stats */ /* Count index scan for stats */
pgstat_count_index_scan(scan->indexRelation); pgstat_count_index_scan(scan->indexRelation);
#if PG_VERSION_NUM >= 180000
if (scan->instrument)
scan->instrument->nsearches++;
#endif
/* Safety check */ /* Safety check */
if (scan->orderByData == NULL) if (scan->orderByData == NULL)