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3 Commits
fanalyzer
...
angular_di
| Author | SHA1 | Date | |
|---|---|---|---|
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56dedd060c | ||
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85b4db5db4 | ||
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1a0b9d81ce |
4
.github/workflows/build.yml
vendored
4
.github/workflows/build.yml
vendored
@@ -39,10 +39,6 @@ jobs:
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|||||||
sudo apt-get update
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sudo apt-get update
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||||||
sudo apt-get install libipc-run-perl
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sudo apt-get install libipc-run-perl
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||||||
- run: make prove_installcheck
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- run: make prove_installcheck
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||||||
- if: ${{ matrix.os == 'ubuntu-22.04' }}
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run: make clean && make
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||||||
env:
|
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||||||
PG_CFLAGS: -Werror -fanalyzer
|
|
||||||
mac:
|
mac:
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||||||
runs-on: macos-latest
|
runs-on: macos-latest
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||||||
if: ${{ !startsWith(github.ref_name, 'windows') }}
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if: ${{ !startsWith(github.ref_name, 'windows') }}
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@@ -1,6 +1,6 @@
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## 0.5.1 (unreleased)
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## 0.5.1 (unreleased)
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|
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- Improved performance of index scans for IVFFlat after updates and deletes
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- Added `angular_distance` function
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## 0.5.0 (2023-08-28)
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## 0.5.0 (2023-08-28)
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2
Makefile
2
Makefile
@@ -8,7 +8,7 @@ HEADERS = src/vector.h
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|
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TESTS = $(wildcard test/sql/*.sql)
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TESTS = $(wildcard test/sql/*.sql)
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REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS))
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REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS))
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REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)
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REGRESS_OPTS = --inputdir=test --load-extension=vector
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|
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OPTFLAGS = -march=native
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OPTFLAGS = -march=native
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@@ -5,7 +5,7 @@ OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hn
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HEADERS = src\vector.h
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HEADERS = src\vector.h
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|
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REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged
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REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged
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REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)
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REGRESS_OPTS = --inputdir=test --load-extension=vector
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|
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# For /arch flags
|
# For /arch flags
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# https://learn.microsoft.com/en-us/cpp/build/reference/arch-minimum-cpu-architecture
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# https://learn.microsoft.com/en-us/cpp/build/reference/arch-minimum-cpu-architecture
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@@ -595,18 +595,12 @@ pgvector is available on [these providers](https://github.com/pgvector/pgvector/
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|
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## Upgrading
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## Upgrading
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Install the latest version. Then in each database you want to upgrade, run:
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Install the latest version and run:
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|
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```sql
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```sql
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ALTER EXTENSION vector UPDATE;
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ALTER EXTENSION vector UPDATE;
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```
|
```
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||||||
|
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||||||
You can check the version in the current database with:
|
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||||||
|
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||||||
```sql
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SELECT extversion FROM pg_extension WHERE extname = 'vector';
|
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||||||
```
|
|
||||||
|
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||||||
## Upgrade Notes
|
## Upgrade Notes
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||||||
|
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### 0.4.0
|
### 0.4.0
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|||||||
5
sql/vector--0.5.0--0.5.1.sql
Normal file
5
sql/vector--0.5.0--0.5.1.sql
Normal file
@@ -0,0 +1,5 @@
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-- complain if script is sourced in psql, rather than via CREATE EXTENSION
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\echo Use "ALTER EXTENSION vector UPDATE TO '0.5.1'" to load this file. \quit
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CREATE FUNCTION angular_distance(vector, vector) RETURNS float8
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AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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@@ -87,6 +87,9 @@ CREATE FUNCTION vector_l2_squared_distance(vector, vector) RETURNS float8
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|||||||
CREATE FUNCTION vector_negative_inner_product(vector, vector) RETURNS float8
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CREATE FUNCTION vector_negative_inner_product(vector, vector) RETURNS float8
|
||||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||||
|
|
||||||
|
CREATE FUNCTION angular_distance(vector, vector) RETURNS float8
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|
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
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||||||
|
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||||||
CREATE FUNCTION vector_spherical_distance(vector, vector) RETURNS float8
|
CREATE FUNCTION vector_spherical_distance(vector, vector) RETURNS float8
|
||||||
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
|
||||||
|
|
||||||
|
|||||||
@@ -91,7 +91,7 @@ hnswcostestimate(PlannerInfo *root, IndexPath *path, double loop_count,
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MemSet(&costs, 0, sizeof(costs));
|
MemSet(&costs, 0, sizeof(costs));
|
||||||
|
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index = index_open(path->indexinfo->indexoid, NoLock);
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index = index_open(path->indexinfo->indexoid, NoLock);
|
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HnswGetMetaPageInfo(index, &m, NULL);
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m = HnswGetM(index);
|
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index_close(index, NoLock);
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index_close(index, NoLock);
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||||||
|
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/* Approximate entry level */
|
/* Approximate entry level */
|
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@@ -196,7 +196,7 @@ hnswhandler(PG_FUNCTION_ARGS)
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amroutine->aminsert = hnswinsert;
|
amroutine->aminsert = hnswinsert;
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||||||
amroutine->ambulkdelete = hnswbulkdelete;
|
amroutine->ambulkdelete = hnswbulkdelete;
|
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amroutine->amvacuumcleanup = hnswvacuumcleanup;
|
amroutine->amvacuumcleanup = hnswvacuumcleanup;
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amroutine->amcanreturn = NULL;
|
amroutine->amcanreturn = NULL; /* tuple not included in heapsort */
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amroutine->amcostestimate = hnswcostestimate;
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amroutine->amcostestimate = hnswcostestimate;
|
||||||
amroutine->amoptions = hnswoptions;
|
amroutine->amoptions = hnswoptions;
|
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amroutine->amproperty = NULL; /* TODO AMPROP_DISTANCE_ORDERABLE */
|
amroutine->amproperty = NULL; /* TODO AMPROP_DISTANCE_ORDERABLE */
|
||||||
|
|||||||
@@ -218,6 +218,7 @@ typedef HnswNeighborTupleData * HnswNeighborTuple;
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|||||||
typedef struct HnswScanOpaqueData
|
typedef struct HnswScanOpaqueData
|
||||||
{
|
{
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||||||
bool first;
|
bool first;
|
||||||
|
Buffer buf;
|
||||||
List *w;
|
List *w;
|
||||||
MemoryContext tmpCtx;
|
MemoryContext tmpCtx;
|
||||||
|
|
||||||
@@ -258,16 +259,15 @@ typedef struct HnswVacuumState
|
|||||||
/* Methods */
|
/* Methods */
|
||||||
int HnswGetM(Relation index);
|
int HnswGetM(Relation index);
|
||||||
int HnswGetEfConstruction(Relation index);
|
int HnswGetEfConstruction(Relation index);
|
||||||
FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum);
|
FmgrInfo *HnswOptionalProcInfo(Relation rel, uint16 procnum);
|
||||||
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
||||||
void HnswCommitBuffer(Buffer buf, GenericXLogState *state);
|
void HnswCommitBuffer(Buffer buf, GenericXLogState *state);
|
||||||
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
|
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
|
||||||
void HnswInitPage(Buffer buf, Page page);
|
void HnswInitPage(Buffer buf, Page page);
|
||||||
void HnswInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogState **state);
|
void HnswInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogState **state);
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||||||
void HnswInit(void);
|
void HnswInit(void);
|
||||||
List *HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement);
|
List *HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, bool inserting, HnswElement skipElement);
|
||||||
HnswElement HnswGetEntryPoint(Relation index);
|
HnswElement HnswGetEntryPoint(Relation index);
|
||||||
void HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint);
|
|
||||||
HnswElement HnswInitElement(ItemPointer tid, int m, double ml, int maxLevel);
|
HnswElement HnswInitElement(ItemPointer tid, int m, double ml, int maxLevel);
|
||||||
void HnswFreeElement(HnswElement element);
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void HnswFreeElement(HnswElement element);
|
||||||
HnswElement HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno);
|
HnswElement HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno);
|
||||||
@@ -284,7 +284,7 @@ void HnswLoadElementFromTuple(HnswElement element, HnswElementTuple etup, bool
|
|||||||
void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
void HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index, FmgrInfo *procinfo, Oid collation, bool loadVec);
|
||||||
void HnswSetElementTuple(HnswElementTuple etup, HnswElement element);
|
void HnswSetElementTuple(HnswElementTuple etup, HnswElement element);
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||||||
void HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
|
void HnswUpdateConnection(HnswElement element, HnswCandidate * hc, int m, int lc, int *updateIdx, Relation index, FmgrInfo *procinfo, Oid collation);
|
||||||
void HnswLoadNeighbors(HnswElement element, Relation index, int m);
|
void HnswLoadNeighbors(HnswElement element, Relation index);
|
||||||
|
|
||||||
/* Index access methods */
|
/* Index access methods */
|
||||||
IndexBuildResult *hnswbuild(Relation heap, Relation index, IndexInfo *indexInfo);
|
IndexBuildResult *hnswbuild(Relation heap, Relation index, IndexInfo *indexInfo);
|
||||||
|
|||||||
@@ -81,6 +81,7 @@ HnswBuildAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **
|
|||||||
HnswPageGetOpaque(*page)->nextblkno = BufferGetBlockNumber(newbuf);
|
HnswPageGetOpaque(*page)->nextblkno = BufferGetBlockNumber(newbuf);
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(*buf);
|
||||||
GenericXLogFinish(*state);
|
GenericXLogFinish(*state);
|
||||||
UnlockReleaseBuffer(*buf);
|
UnlockReleaseBuffer(*buf);
|
||||||
|
|
||||||
@@ -178,6 +179,7 @@ CreateElementPages(HnswBuildState * buildstate)
|
|||||||
insertPage = BufferGetBlockNumber(buf);
|
insertPage = BufferGetBlockNumber(buf);
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
|
|
||||||
@@ -225,6 +227,7 @@ CreateNeighborPages(HnswBuildState * buildstate)
|
|||||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
}
|
}
|
||||||
|
|||||||
@@ -202,6 +202,8 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
|||||||
HnswInsertAppendPage(index, &newbuf, &newpage, state, page);
|
HnswInsertAppendPage(index, &newbuf, &newpage, state, page);
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(newbuf);
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
|
|
||||||
/* Unlock previous buffer */
|
/* Unlock previous buffer */
|
||||||
@@ -268,6 +270,9 @@ WriteNewElementPages(Relation index, HnswElement e, int m, BlockNumber insertPag
|
|||||||
}
|
}
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(buf);
|
||||||
|
if (nbuf != buf)
|
||||||
|
MarkBufferDirty(nbuf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
if (nbuf != buf)
|
if (nbuf != buf)
|
||||||
@@ -324,7 +329,7 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
|||||||
|
|
||||||
/* Get latest neighbors since they may have changed */
|
/* Get latest neighbors since they may have changed */
|
||||||
/* Do not lock yet since selecting neighbors can take time */
|
/* Do not lock yet since selecting neighbors can take time */
|
||||||
HnswLoadNeighbors(hc->element, index, m);
|
HnswLoadNeighbors(hc->element, index);
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Could improve performance for vacuuming by checking neighbors
|
* Could improve performance for vacuuming by checking neighbors
|
||||||
@@ -386,6 +391,7 @@ HnswUpdateNeighborPages(Relation index, FmgrInfo *procinfo, Oid collation, HnswE
|
|||||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
}
|
}
|
||||||
else
|
else
|
||||||
@@ -439,6 +445,7 @@ HnswAddDuplicate(Relation index, HnswElement element, HnswElement dup)
|
|||||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
|
|
||||||
@@ -485,8 +492,9 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
|||||||
FmgrInfo *normprocinfo;
|
FmgrInfo *normprocinfo;
|
||||||
HnswElement entryPoint;
|
HnswElement entryPoint;
|
||||||
HnswElement element;
|
HnswElement element;
|
||||||
int m;
|
int m = HnswGetM(index);
|
||||||
int efConstruction = HnswGetEfConstruction(index);
|
int efConstruction = HnswGetEfConstruction(index);
|
||||||
|
double ml = HnswGetMl(m);
|
||||||
FmgrInfo *procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
FmgrInfo *procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||||
Oid collation = index->rd_indcollation[0];
|
Oid collation = index->rd_indcollation[0];
|
||||||
HnswElement dup;
|
HnswElement dup;
|
||||||
@@ -503,6 +511,10 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
|||||||
return false;
|
return false;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
/* Create an element */
|
||||||
|
element = HnswInitElement(heap_tid, m, ml, HnswGetMaxLevel(m));
|
||||||
|
element->vec = DatumGetVector(value);
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Get a shared lock. This allows vacuum to ensure no in-flight inserts
|
* Get a shared lock. This allows vacuum to ensure no in-flight inserts
|
||||||
* before repairing graph. Use a page lock so it does not interfere with
|
* before repairing graph. Use a page lock so it does not interfere with
|
||||||
@@ -510,12 +522,8 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
|
|||||||
*/
|
*/
|
||||||
LockPage(index, HNSW_UPDATE_LOCK, lockmode);
|
LockPage(index, HNSW_UPDATE_LOCK, lockmode);
|
||||||
|
|
||||||
/* Get m and entry point */
|
/* Get entry point */
|
||||||
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
entryPoint = HnswGetEntryPoint(index);
|
||||||
|
|
||||||
/* Create an element */
|
|
||||||
element = HnswInitElement(heap_tid, m, HnswGetMl(m), HnswGetMaxLevel(m));
|
|
||||||
element->vec = DatumGetVector(value);
|
|
||||||
|
|
||||||
/* Prevent concurrent inserts when likely updating entry point */
|
/* Prevent concurrent inserts when likely updating entry point */
|
||||||
if (entryPoint == NULL || element->level > entryPoint->level)
|
if (entryPoint == NULL || element->level > entryPoint->level)
|
||||||
|
|||||||
@@ -19,11 +19,7 @@ GetScanItems(IndexScanDesc scan, Datum q)
|
|||||||
Oid collation = so->collation;
|
Oid collation = so->collation;
|
||||||
List *ep;
|
List *ep;
|
||||||
List *w;
|
List *w;
|
||||||
int m;
|
HnswElement entryPoint = HnswGetEntryPoint(index);
|
||||||
HnswElement entryPoint;
|
|
||||||
|
|
||||||
/* Get m and entry point */
|
|
||||||
HnswGetMetaPageInfo(index, &m, &entryPoint);
|
|
||||||
|
|
||||||
if (entryPoint == NULL)
|
if (entryPoint == NULL)
|
||||||
return NIL;
|
return NIL;
|
||||||
@@ -32,11 +28,11 @@ GetScanItems(IndexScanDesc scan, Datum q)
|
|||||||
|
|
||||||
for (int lc = entryPoint->level; lc >= 1; lc--)
|
for (int lc = entryPoint->level; lc >= 1; lc--)
|
||||||
{
|
{
|
||||||
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, m, false, NULL);
|
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, false, NULL);
|
||||||
ep = w;
|
ep = w;
|
||||||
}
|
}
|
||||||
|
|
||||||
return HnswSearchLayer(q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
|
return HnswSearchLayer(q, ep, hnsw_ef_search, 0, index, procinfo, collation, false, NULL);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -62,33 +58,6 @@ GetDimensions(Relation index)
|
|||||||
return dimensions;
|
return dimensions;
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
|
||||||
* Get scan value
|
|
||||||
*/
|
|
||||||
static Datum
|
|
||||||
GetScanValue(IndexScanDesc scan)
|
|
||||||
{
|
|
||||||
HnswScanOpaque so = (HnswScanOpaque) scan->opaque;
|
|
||||||
Datum value;
|
|
||||||
|
|
||||||
if (scan->orderByData->sk_flags & SK_ISNULL)
|
|
||||||
value = PointerGetDatum(InitVector(GetDimensions(scan->indexRelation)));
|
|
||||||
else
|
|
||||||
{
|
|
||||||
value = scan->orderByData->sk_argument;
|
|
||||||
|
|
||||||
/* Value should not be compressed or toasted */
|
|
||||||
Assert(!VARATT_IS_COMPRESSED(DatumGetPointer(value)));
|
|
||||||
Assert(!VARATT_IS_EXTENDED(DatumGetPointer(value)));
|
|
||||||
|
|
||||||
/* Fine if normalization fails */
|
|
||||||
if (so->normprocinfo != NULL)
|
|
||||||
HnswNormValue(so->normprocinfo, so->collation, &value, NULL);
|
|
||||||
}
|
|
||||||
|
|
||||||
return value;
|
|
||||||
}
|
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Prepare for an index scan
|
* Prepare for an index scan
|
||||||
*/
|
*/
|
||||||
@@ -101,6 +70,7 @@ hnswbeginscan(Relation index, int nkeys, int norderbys)
|
|||||||
scan = RelationGetIndexScan(index, nkeys, norderbys);
|
scan = RelationGetIndexScan(index, nkeys, norderbys);
|
||||||
|
|
||||||
so = (HnswScanOpaque) palloc(sizeof(HnswScanOpaqueData));
|
so = (HnswScanOpaque) palloc(sizeof(HnswScanOpaqueData));
|
||||||
|
so->buf = InvalidBuffer;
|
||||||
so->first = true;
|
so->first = true;
|
||||||
so->tmpCtx = AllocSetContextCreate(CurrentMemoryContext,
|
so->tmpCtx = AllocSetContextCreate(CurrentMemoryContext,
|
||||||
"Hnsw scan temporary context",
|
"Hnsw scan temporary context",
|
||||||
@@ -160,8 +130,20 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
|
|||||||
if (scan->orderByData == NULL)
|
if (scan->orderByData == NULL)
|
||||||
elog(ERROR, "cannot scan hnsw index without order");
|
elog(ERROR, "cannot scan hnsw index without order");
|
||||||
|
|
||||||
/* Get scan value */
|
if (scan->orderByData->sk_flags & SK_ISNULL)
|
||||||
value = GetScanValue(scan);
|
value = PointerGetDatum(InitVector(GetDimensions(scan->indexRelation)));
|
||||||
|
else
|
||||||
|
{
|
||||||
|
value = scan->orderByData->sk_argument;
|
||||||
|
|
||||||
|
/* Value should not be compressed or toasted */
|
||||||
|
Assert(!VARATT_IS_COMPRESSED(DatumGetPointer(value)));
|
||||||
|
Assert(!VARATT_IS_EXTENDED(DatumGetPointer(value)));
|
||||||
|
|
||||||
|
/* Fine if normalization fails */
|
||||||
|
if (so->normprocinfo != NULL)
|
||||||
|
HnswNormValue(so->normprocinfo, so->collation, &value, NULL);
|
||||||
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Get a shared lock. This allows vacuum to ensure no in-flight scans
|
* Get a shared lock. This allows vacuum to ensure no in-flight scans
|
||||||
@@ -180,35 +162,40 @@ hnswgettuple(IndexScanDesc scan, ScanDirection dir)
|
|||||||
while (list_length(so->w) > 0)
|
while (list_length(so->w) > 0)
|
||||||
{
|
{
|
||||||
HnswCandidate *hc = llast(so->w);
|
HnswCandidate *hc = llast(so->w);
|
||||||
ItemPointer heaptid;
|
ItemPointer tid;
|
||||||
|
BlockNumber indexblkno;
|
||||||
|
|
||||||
/* Move to next element if no valid heap TIDs */
|
/* Move to next element if no valid heap tids */
|
||||||
if (list_length(hc->element->heaptids) == 0)
|
if (list_length(hc->element->heaptids) == 0)
|
||||||
{
|
{
|
||||||
so->w = list_delete_last(so->w);
|
so->w = list_delete_last(so->w);
|
||||||
continue;
|
continue;
|
||||||
}
|
}
|
||||||
|
|
||||||
heaptid = llast(hc->element->heaptids);
|
tid = llast(hc->element->heaptids);
|
||||||
|
indexblkno = hc->element->blkno;
|
||||||
|
|
||||||
hc->element->heaptids = list_delete_last(hc->element->heaptids);
|
hc->element->heaptids = list_delete_last(hc->element->heaptids);
|
||||||
|
|
||||||
MemoryContextSwitchTo(oldCtx);
|
MemoryContextSwitchTo(oldCtx);
|
||||||
|
|
||||||
#if PG_VERSION_NUM >= 120000
|
#if PG_VERSION_NUM >= 120000
|
||||||
scan->xs_heaptid = *heaptid;
|
scan->xs_heaptid = *tid;
|
||||||
#else
|
#else
|
||||||
scan->xs_ctup.t_self = *heaptid;
|
scan->xs_ctup.t_self = *tid;
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
|
/* Unpin buffer */
|
||||||
|
if (BufferIsValid(so->buf))
|
||||||
|
ReleaseBuffer(so->buf);
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Typically, an index scan must maintain a pin on the index page
|
* An index scan must maintain a pin on the index page holding the
|
||||||
* holding the item last returned by amgettuple. However, this is not
|
* item last returned by amgettuple
|
||||||
* needed with the current vacuum strategy, which ensures scans do not
|
|
||||||
* visit tuples in danger of being marked as deleted.
|
|
||||||
*
|
*
|
||||||
* https://www.postgresql.org/docs/current/index-locking.html
|
* https://www.postgresql.org/docs/current/index-locking.html
|
||||||
*/
|
*/
|
||||||
|
so->buf = ReadBuffer(scan->indexRelation, indexblkno);
|
||||||
|
|
||||||
scan->xs_recheckorderby = false;
|
scan->xs_recheckorderby = false;
|
||||||
return true;
|
return true;
|
||||||
@@ -226,6 +213,10 @@ hnswendscan(IndexScanDesc scan)
|
|||||||
{
|
{
|
||||||
HnswScanOpaque so = (HnswScanOpaque) scan->opaque;
|
HnswScanOpaque so = (HnswScanOpaque) scan->opaque;
|
||||||
|
|
||||||
|
/* Release pin */
|
||||||
|
if (BufferIsValid(so->buf))
|
||||||
|
ReleaseBuffer(so->buf);
|
||||||
|
|
||||||
MemoryContextDelete(so->tmpCtx);
|
MemoryContextDelete(so->tmpCtx);
|
||||||
|
|
||||||
pfree(so);
|
pfree(so);
|
||||||
|
|||||||
@@ -38,12 +38,12 @@ HnswGetEfConstruction(Relation index)
|
|||||||
* Get proc
|
* Get proc
|
||||||
*/
|
*/
|
||||||
FmgrInfo *
|
FmgrInfo *
|
||||||
HnswOptionalProcInfo(Relation index, uint16 procnum)
|
HnswOptionalProcInfo(Relation rel, uint16 procnum)
|
||||||
{
|
{
|
||||||
if (!OidIsValid(index_getprocid(index, 1, procnum)))
|
if (!OidIsValid(index_getprocid(rel, 1, procnum)))
|
||||||
return NULL;
|
return NULL;
|
||||||
|
|
||||||
return index_getprocinfo(index, 1, procnum);
|
return index_getprocinfo(rel, 1, procnum);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -117,6 +117,7 @@ HnswInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogState *
|
|||||||
void
|
void
|
||||||
HnswCommitBuffer(Buffer buf, GenericXLogState *state)
|
HnswCommitBuffer(Buffer buf, GenericXLogState *state)
|
||||||
{
|
{
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
}
|
}
|
||||||
@@ -142,17 +143,6 @@ HnswInitNeighbors(HnswElement element, int m)
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
|
||||||
* Free neighbors
|
|
||||||
*/
|
|
||||||
static void
|
|
||||||
HnswFreeNeighbors(HnswElement element)
|
|
||||||
{
|
|
||||||
for (int lc = 0; lc <= element->level; lc++)
|
|
||||||
pfree(element->neighbors[lc].items);
|
|
||||||
pfree(element->neighbors);
|
|
||||||
}
|
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Allocate an element
|
* Allocate an element
|
||||||
*/
|
*/
|
||||||
@@ -184,8 +174,10 @@ HnswInitElement(ItemPointer heaptid, int m, double ml, int maxLevel)
|
|||||||
void
|
void
|
||||||
HnswFreeElement(HnswElement element)
|
HnswFreeElement(HnswElement element)
|
||||||
{
|
{
|
||||||
HnswFreeNeighbors(element);
|
|
||||||
list_free_deep(element->heaptids);
|
list_free_deep(element->heaptids);
|
||||||
|
for (int lc = 0; lc <= element->level; lc++)
|
||||||
|
pfree(element->neighbors[lc].items);
|
||||||
|
pfree(element->neighbors);
|
||||||
pfree(element->vec);
|
pfree(element->vec);
|
||||||
pfree(element);
|
pfree(element);
|
||||||
}
|
}
|
||||||
@@ -218,43 +210,25 @@ HnswInitElementFromBlock(BlockNumber blkno, OffsetNumber offno)
|
|||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Get the metapage info
|
* Get the entry point
|
||||||
*/
|
*/
|
||||||
void
|
HnswElement
|
||||||
HnswGetMetaPageInfo(Relation index, int *m, HnswElement * entryPoint)
|
HnswGetEntryPoint(Relation index)
|
||||||
{
|
{
|
||||||
Buffer buf;
|
Buffer buf;
|
||||||
Page page;
|
Page page;
|
||||||
HnswMetaPage metap;
|
HnswMetaPage metap;
|
||||||
|
HnswElement entryPoint = NULL;
|
||||||
|
|
||||||
buf = ReadBuffer(index, HNSW_METAPAGE_BLKNO);
|
buf = ReadBuffer(index, HNSW_METAPAGE_BLKNO);
|
||||||
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
||||||
page = BufferGetPage(buf);
|
page = BufferGetPage(buf);
|
||||||
metap = HnswPageGetMeta(page);
|
metap = HnswPageGetMeta(page);
|
||||||
|
|
||||||
if (m != NULL)
|
if (BlockNumberIsValid(metap->entryBlkno))
|
||||||
*m = metap->m;
|
entryPoint = HnswInitElementFromBlock(metap->entryBlkno, metap->entryOffno);
|
||||||
|
|
||||||
if (entryPoint != NULL)
|
|
||||||
{
|
|
||||||
if (BlockNumberIsValid(metap->entryBlkno))
|
|
||||||
*entryPoint = HnswInitElementFromBlock(metap->entryBlkno, metap->entryOffno);
|
|
||||||
else
|
|
||||||
*entryPoint = NULL;
|
|
||||||
}
|
|
||||||
|
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
}
|
|
||||||
|
|
||||||
/*
|
|
||||||
* Get the entry point
|
|
||||||
*/
|
|
||||||
HnswElement
|
|
||||||
HnswGetEntryPoint(Relation index)
|
|
||||||
{
|
|
||||||
HnswElement entryPoint;
|
|
||||||
|
|
||||||
HnswGetMetaPageInfo(index, NULL, &entryPoint);
|
|
||||||
|
|
||||||
return entryPoint;
|
return entryPoint;
|
||||||
}
|
}
|
||||||
@@ -363,9 +337,10 @@ HnswSetNeighborTuple(HnswNeighborTuple ntup, HnswElement e, int m)
|
|||||||
* Load neighbors from page
|
* Load neighbors from page
|
||||||
*/
|
*/
|
||||||
static void
|
static void
|
||||||
LoadNeighborsFromPage(HnswElement element, Relation index, Page page, int m)
|
LoadNeighborsFromPage(HnswElement element, Relation index, Page page)
|
||||||
{
|
{
|
||||||
HnswNeighborTuple ntup = (HnswNeighborTuple) PageGetItem(page, PageGetItemId(page, element->neighborOffno));
|
HnswNeighborTuple ntup = (HnswNeighborTuple) PageGetItem(page, PageGetItemId(page, element->neighborOffno));
|
||||||
|
int m = HnswGetM(index);
|
||||||
int neighborCount = (element->level + 2) * m;
|
int neighborCount = (element->level + 2) * m;
|
||||||
|
|
||||||
Assert(HnswIsNeighborTuple(ntup));
|
Assert(HnswIsNeighborTuple(ntup));
|
||||||
@@ -406,7 +381,7 @@ LoadNeighborsFromPage(HnswElement element, Relation index, Page page, int m)
|
|||||||
* Load neighbors
|
* Load neighbors
|
||||||
*/
|
*/
|
||||||
void
|
void
|
||||||
HnswLoadNeighbors(HnswElement element, Relation index, int m)
|
HnswLoadNeighbors(HnswElement element, Relation index)
|
||||||
{
|
{
|
||||||
Buffer buf;
|
Buffer buf;
|
||||||
Page page;
|
Page page;
|
||||||
@@ -415,7 +390,7 @@ HnswLoadNeighbors(HnswElement element, Relation index, int m)
|
|||||||
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
||||||
page = BufferGetPage(buf);
|
page = BufferGetPage(buf);
|
||||||
|
|
||||||
LoadNeighborsFromPage(element, index, page, m);
|
LoadNeighborsFromPage(element, index, page);
|
||||||
|
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
}
|
}
|
||||||
@@ -568,7 +543,7 @@ AddToVisited(HTAB *v, HnswCandidate * hc, Relation index, bool *found)
|
|||||||
* Algorithm 2 from paper
|
* Algorithm 2 from paper
|
||||||
*/
|
*/
|
||||||
List *
|
List *
|
||||||
HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, int m, bool inserting, HnswElement skipElement)
|
HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *procinfo, Oid collation, bool inserting, HnswElement skipElement)
|
||||||
{
|
{
|
||||||
ListCell *lc2;
|
ListCell *lc2;
|
||||||
|
|
||||||
@@ -623,7 +598,7 @@ HnswSearchLayer(Datum q, List *ep, int ef, int lc, Relation index, FmgrInfo *pro
|
|||||||
break;
|
break;
|
||||||
|
|
||||||
if (c->element->neighbors == NULL)
|
if (c->element->neighbors == NULL)
|
||||||
HnswLoadNeighbors(c->element, index, m);
|
HnswLoadNeighbors(c->element, index);
|
||||||
|
|
||||||
/* Get the neighborhood at layer lc */
|
/* Get the neighborhood at layer lc */
|
||||||
neighborhood = &c->element->neighbors[lc];
|
neighborhood = &c->element->neighbors[lc];
|
||||||
@@ -981,7 +956,7 @@ HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, F
|
|||||||
/* 1st phase: greedy search to insert level */
|
/* 1st phase: greedy search to insert level */
|
||||||
for (int lc = entryLevel; lc >= level + 1; lc--)
|
for (int lc = entryLevel; lc >= level + 1; lc--)
|
||||||
{
|
{
|
||||||
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, m, true, skipElement);
|
w = HnswSearchLayer(q, ep, 1, lc, index, procinfo, collation, true, skipElement);
|
||||||
ep = w;
|
ep = w;
|
||||||
}
|
}
|
||||||
|
|
||||||
@@ -999,7 +974,7 @@ HnswInsertElement(HnswElement element, HnswElement entryPoint, Relation index, F
|
|||||||
List *neighbors;
|
List *neighbors;
|
||||||
List *lw;
|
List *lw;
|
||||||
|
|
||||||
w = HnswSearchLayer(q, ep, efConstruction, lc, index, procinfo, collation, m, true, skipElement);
|
w = HnswSearchLayer(q, ep, efConstruction, lc, index, procinfo, collation, true, skipElement);
|
||||||
|
|
||||||
/* Elements being deleted or skipped can help with search */
|
/* Elements being deleted or skipped can help with search */
|
||||||
/* but should be removed before selecting neighbors */
|
/* but should be removed before selecting neighbors */
|
||||||
|
|||||||
@@ -128,7 +128,10 @@ RemoveHeapTids(HnswVacuumState * vacuumstate)
|
|||||||
blkno = HnswPageGetOpaque(page)->nextblkno;
|
blkno = HnswPageGetOpaque(page)->nextblkno;
|
||||||
|
|
||||||
if (updated)
|
if (updated)
|
||||||
|
{
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
|
}
|
||||||
else
|
else
|
||||||
GenericXLogAbort(state);
|
GenericXLogAbort(state);
|
||||||
|
|
||||||
@@ -226,6 +229,7 @@ RepairGraphElement(HnswVacuumState * vacuumstate, HnswElement element, HnswEleme
|
|||||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
|
|
||||||
@@ -326,10 +330,7 @@ RepairGraph(HnswVacuumState * vacuumstate)
|
|||||||
BufferAccessStrategy bas = vacuumstate->bas;
|
BufferAccessStrategy bas = vacuumstate->bas;
|
||||||
BlockNumber blkno = HNSW_HEAD_BLKNO;
|
BlockNumber blkno = HNSW_HEAD_BLKNO;
|
||||||
|
|
||||||
/*
|
/* Wait for inserts to complete */
|
||||||
* Wait for inserts to complete. Inserts before this point may have
|
|
||||||
* neighbors about to be deleted. Inserts after this point will not.
|
|
||||||
*/
|
|
||||||
LockPage(index, HNSW_UPDATE_LOCK, ExclusiveLock);
|
LockPage(index, HNSW_UPDATE_LOCK, ExclusiveLock);
|
||||||
UnlockPage(index, HNSW_UPDATE_LOCK, ExclusiveLock);
|
UnlockPage(index, HNSW_UPDATE_LOCK, ExclusiveLock);
|
||||||
|
|
||||||
@@ -442,11 +443,7 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
|||||||
Relation index = vacuumstate->index;
|
Relation index = vacuumstate->index;
|
||||||
BufferAccessStrategy bas = vacuumstate->bas;
|
BufferAccessStrategy bas = vacuumstate->bas;
|
||||||
|
|
||||||
/*
|
/* Wait for selects to complete */
|
||||||
* Wait for index scans to complete. Scans before this point may contain
|
|
||||||
* tuples about to be deleted. Scans after this point will not, since the
|
|
||||||
* graph has been repaired.
|
|
||||||
*/
|
|
||||||
LockPage(index, HNSW_SCAN_LOCK, ExclusiveLock);
|
LockPage(index, HNSW_SCAN_LOCK, ExclusiveLock);
|
||||||
UnlockPage(index, HNSW_SCAN_LOCK, ExclusiveLock);
|
UnlockPage(index, HNSW_SCAN_LOCK, ExclusiveLock);
|
||||||
|
|
||||||
@@ -543,6 +540,9 @@ MarkDeleted(HnswVacuumState * vacuumstate)
|
|||||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(buf);
|
||||||
|
if (nbuf != buf)
|
||||||
|
MarkBufferDirty(nbuf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
if (nbuf != buf)
|
if (nbuf != buf)
|
||||||
UnlockReleaseBuffer(nbuf);
|
UnlockReleaseBuffer(nbuf);
|
||||||
@@ -582,6 +582,7 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
|
|||||||
vacuumstate->stats = stats;
|
vacuumstate->stats = stats;
|
||||||
vacuumstate->callback = callback;
|
vacuumstate->callback = callback;
|
||||||
vacuumstate->callback_state = callback_state;
|
vacuumstate->callback_state = callback_state;
|
||||||
|
vacuumstate->m = HnswGetM(index);
|
||||||
vacuumstate->efConstruction = HnswGetEfConstruction(index);
|
vacuumstate->efConstruction = HnswGetEfConstruction(index);
|
||||||
vacuumstate->bas = GetAccessStrategy(BAS_BULKREAD);
|
vacuumstate->bas = GetAccessStrategy(BAS_BULKREAD);
|
||||||
vacuumstate->procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
vacuumstate->procinfo = index_getprocinfo(index, 1, HNSW_DISTANCE_PROC);
|
||||||
@@ -591,9 +592,6 @@ InitVacuumState(HnswVacuumState * vacuumstate, IndexVacuumInfo *info, IndexBulkD
|
|||||||
"Hnsw vacuum temporary context",
|
"Hnsw vacuum temporary context",
|
||||||
ALLOCSET_DEFAULT_SIZES);
|
ALLOCSET_DEFAULT_SIZES);
|
||||||
|
|
||||||
/* Get m from metapage */
|
|
||||||
HnswGetMetaPageInfo(index, &vacuumstate->m, NULL);
|
|
||||||
|
|
||||||
/* Create hash table */
|
/* Create hash table */
|
||||||
hash_ctl.keysize = sizeof(ItemPointerData);
|
hash_ctl.keysize = sizeof(ItemPointerData);
|
||||||
hash_ctl.entrysize = sizeof(ItemPointerData);
|
hash_ctl.entrysize = sizeof(ItemPointerData);
|
||||||
|
|||||||
@@ -506,30 +506,29 @@ CreateListPages(Relation index, VectorArray centers, int dimensions,
|
|||||||
Buffer buf;
|
Buffer buf;
|
||||||
Page page;
|
Page page;
|
||||||
GenericXLogState *state;
|
GenericXLogState *state;
|
||||||
Size listSize;
|
OffsetNumber offno;
|
||||||
|
Size itemsz;
|
||||||
IvfflatList list;
|
IvfflatList list;
|
||||||
|
|
||||||
listSize = MAXALIGN(IVFFLAT_LIST_SIZE(dimensions));
|
itemsz = MAXALIGN(IVFFLAT_LIST_SIZE(dimensions));
|
||||||
list = palloc(listSize);
|
list = palloc(itemsz);
|
||||||
|
|
||||||
buf = IvfflatNewBuffer(index, forkNum);
|
buf = IvfflatNewBuffer(index, forkNum);
|
||||||
IvfflatInitRegisterPage(index, &buf, &page, &state);
|
IvfflatInitRegisterPage(index, &buf, &page, &state);
|
||||||
|
|
||||||
for (int i = 0; i < lists; i++)
|
for (int i = 0; i < lists; i++)
|
||||||
{
|
{
|
||||||
OffsetNumber offno;
|
|
||||||
|
|
||||||
/* Load list */
|
/* Load list */
|
||||||
list->startPage = InvalidBlockNumber;
|
list->startPage = InvalidBlockNumber;
|
||||||
list->insertPage = InvalidBlockNumber;
|
list->insertPage = InvalidBlockNumber;
|
||||||
memcpy(&list->center, VectorArrayGet(centers, i), VECTOR_SIZE(dimensions));
|
memcpy(&list->center, VectorArrayGet(centers, i), VECTOR_SIZE(dimensions));
|
||||||
|
|
||||||
/* Ensure free space */
|
/* Ensure free space */
|
||||||
if (PageGetFreeSpace(page) < listSize)
|
if (PageGetFreeSpace(page) < itemsz)
|
||||||
IvfflatAppendPage(index, &buf, &page, &state, forkNum);
|
IvfflatAppendPage(index, &buf, &page, &state, forkNum);
|
||||||
|
|
||||||
/* Add the item */
|
/* Add the item */
|
||||||
offno = PageAddItem(page, (Item) list, listSize, InvalidOffsetNumber, false, false);
|
offno = PageAddItem(page, (Item) list, itemsz, InvalidOffsetNumber, false, false);
|
||||||
if (offno == InvalidOffsetNumber)
|
if (offno == InvalidOffsetNumber)
|
||||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
||||||
|
|
||||||
|
|||||||
@@ -71,7 +71,7 @@ ivfflatcostestimate(PlannerInfo *root, IndexPath *path, double loop_count,
|
|||||||
int lists;
|
int lists;
|
||||||
double ratio;
|
double ratio;
|
||||||
double spc_seq_page_cost;
|
double spc_seq_page_cost;
|
||||||
Relation index;
|
Relation indexRel;
|
||||||
#if PG_VERSION_NUM < 120000
|
#if PG_VERSION_NUM < 120000
|
||||||
List *qinfos;
|
List *qinfos;
|
||||||
#endif
|
#endif
|
||||||
@@ -89,9 +89,9 @@ ivfflatcostestimate(PlannerInfo *root, IndexPath *path, double loop_count,
|
|||||||
|
|
||||||
MemSet(&costs, 0, sizeof(costs));
|
MemSet(&costs, 0, sizeof(costs));
|
||||||
|
|
||||||
index = index_open(path->indexinfo->indexoid, NoLock);
|
indexRel = index_open(path->indexinfo->indexoid, NoLock);
|
||||||
IvfflatGetMetaPageInfo(index, &lists, NULL);
|
lists = IvfflatGetLists(indexRel);
|
||||||
index_close(index, NoLock);
|
index_close(indexRel, NoLock);
|
||||||
|
|
||||||
/* Get the ratio of lists that we need to visit */
|
/* Get the ratio of lists that we need to visit */
|
||||||
ratio = ((double) ivfflat_probes) / lists;
|
ratio = ((double) ivfflat_probes) / lists;
|
||||||
|
|||||||
@@ -244,10 +244,8 @@ typedef struct IvfflatScanList
|
|||||||
typedef struct IvfflatScanOpaqueData
|
typedef struct IvfflatScanOpaqueData
|
||||||
{
|
{
|
||||||
int probes;
|
int probes;
|
||||||
int dimensions;
|
|
||||||
bool first;
|
bool first;
|
||||||
Buffer buf;
|
Buffer buf;
|
||||||
ItemPointerData heaptid;
|
|
||||||
|
|
||||||
/* Sorting */
|
/* Sorting */
|
||||||
Tuplesortstate *sortstate;
|
Tuplesortstate *sortstate;
|
||||||
@@ -277,10 +275,9 @@ VectorArray VectorArrayInit(int maxlen, int dimensions);
|
|||||||
void VectorArrayFree(VectorArray arr);
|
void VectorArrayFree(VectorArray arr);
|
||||||
void PrintVectorArray(char *msg, VectorArray arr);
|
void PrintVectorArray(char *msg, VectorArray arr);
|
||||||
void IvfflatKmeans(Relation index, VectorArray samples, VectorArray centers);
|
void IvfflatKmeans(Relation index, VectorArray samples, VectorArray centers);
|
||||||
FmgrInfo *IvfflatOptionalProcInfo(Relation index, uint16 procnum);
|
FmgrInfo *IvfflatOptionalProcInfo(Relation rel, uint16 procnum);
|
||||||
bool IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
bool IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result);
|
||||||
int IvfflatGetLists(Relation index);
|
int IvfflatGetLists(Relation index);
|
||||||
void IvfflatGetMetaPageInfo(Relation index, int *lists, int *dimensions);
|
|
||||||
void IvfflatUpdateList(Relation index, ListInfo listInfo, BlockNumber insertPage, BlockNumber originalInsertPage, BlockNumber startPage, ForkNumber forkNum);
|
void IvfflatUpdateList(Relation index, ListInfo listInfo, BlockNumber insertPage, BlockNumber originalInsertPage, BlockNumber startPage, ForkNumber forkNum);
|
||||||
void IvfflatCommitBuffer(Buffer buf, GenericXLogState *state);
|
void IvfflatCommitBuffer(Buffer buf, GenericXLogState *state);
|
||||||
void IvfflatAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **state, ForkNumber forkNum);
|
void IvfflatAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **state, ForkNumber forkNum);
|
||||||
|
|||||||
@@ -11,37 +11,36 @@
|
|||||||
* Find the list that minimizes the distance function
|
* Find the list that minimizes the distance function
|
||||||
*/
|
*/
|
||||||
static void
|
static void
|
||||||
FindInsertPage(Relation index, Datum *values, BlockNumber *insertPage, ListInfo * listInfo)
|
FindInsertPage(Relation rel, Datum *values, BlockNumber *insertPage, ListInfo * listInfo)
|
||||||
{
|
{
|
||||||
|
Buffer cbuf;
|
||||||
|
Page cpage;
|
||||||
|
IvfflatList list;
|
||||||
|
double distance;
|
||||||
double minDistance = DBL_MAX;
|
double minDistance = DBL_MAX;
|
||||||
BlockNumber nextblkno = IVFFLAT_HEAD_BLKNO;
|
BlockNumber nextblkno = IVFFLAT_HEAD_BLKNO;
|
||||||
FmgrInfo *procinfo;
|
FmgrInfo *procinfo;
|
||||||
Oid collation;
|
Oid collation;
|
||||||
|
OffsetNumber offno;
|
||||||
|
OffsetNumber maxoffno;
|
||||||
|
|
||||||
/* Avoid compiler warning */
|
/* Avoid compiler warning */
|
||||||
listInfo->blkno = nextblkno;
|
listInfo->blkno = nextblkno;
|
||||||
listInfo->offno = FirstOffsetNumber;
|
listInfo->offno = FirstOffsetNumber;
|
||||||
|
|
||||||
procinfo = index_getprocinfo(index, 1, IVFFLAT_DISTANCE_PROC);
|
procinfo = index_getprocinfo(rel, 1, IVFFLAT_DISTANCE_PROC);
|
||||||
collation = index->rd_indcollation[0];
|
collation = rel->rd_indcollation[0];
|
||||||
|
|
||||||
/* Search all list pages */
|
/* Search all list pages */
|
||||||
while (BlockNumberIsValid(nextblkno))
|
while (BlockNumberIsValid(nextblkno))
|
||||||
{
|
{
|
||||||
Buffer cbuf;
|
cbuf = ReadBuffer(rel, nextblkno);
|
||||||
Page cpage;
|
|
||||||
OffsetNumber maxoffno;
|
|
||||||
|
|
||||||
cbuf = ReadBuffer(index, nextblkno);
|
|
||||||
LockBuffer(cbuf, BUFFER_LOCK_SHARE);
|
LockBuffer(cbuf, BUFFER_LOCK_SHARE);
|
||||||
cpage = BufferGetPage(cbuf);
|
cpage = BufferGetPage(cbuf);
|
||||||
maxoffno = PageGetMaxOffsetNumber(cpage);
|
maxoffno = PageGetMaxOffsetNumber(cpage);
|
||||||
|
|
||||||
for (OffsetNumber offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||||
{
|
{
|
||||||
IvfflatList list;
|
|
||||||
double distance;
|
|
||||||
|
|
||||||
list = (IvfflatList) PageGetItem(cpage, PageGetItemId(cpage, offno));
|
list = (IvfflatList) PageGetItem(cpage, PageGetItemId(cpage, offno));
|
||||||
distance = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, values[0], PointerGetDatum(&list->center)));
|
distance = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, values[0], PointerGetDatum(&list->center)));
|
||||||
|
|
||||||
@@ -64,7 +63,7 @@ FindInsertPage(Relation index, Datum *values, BlockNumber *insertPage, ListInfo
|
|||||||
* Insert a tuple into the index
|
* Insert a tuple into the index
|
||||||
*/
|
*/
|
||||||
static void
|
static void
|
||||||
InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel)
|
InsertTuple(Relation rel, Datum *values, bool *isnull, ItemPointer heap_tid, Relation heapRel)
|
||||||
{
|
{
|
||||||
IndexTuple itup;
|
IndexTuple itup;
|
||||||
Datum value;
|
Datum value;
|
||||||
@@ -81,20 +80,20 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, R
|
|||||||
value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
|
value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
|
||||||
|
|
||||||
/* Normalize if needed */
|
/* Normalize if needed */
|
||||||
normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_NORM_PROC);
|
normprocinfo = IvfflatOptionalProcInfo(rel, IVFFLAT_NORM_PROC);
|
||||||
if (normprocinfo != NULL)
|
if (normprocinfo != NULL)
|
||||||
{
|
{
|
||||||
if (!IvfflatNormValue(normprocinfo, index->rd_indcollation[0], &value, NULL))
|
if (!IvfflatNormValue(normprocinfo, rel->rd_indcollation[0], &value, NULL))
|
||||||
return;
|
return;
|
||||||
}
|
}
|
||||||
|
|
||||||
/* Find the insert page - sets the page and list info */
|
/* Find the insert page - sets the page and list info */
|
||||||
FindInsertPage(index, values, &insertPage, &listInfo);
|
FindInsertPage(rel, values, &insertPage, &listInfo);
|
||||||
Assert(BlockNumberIsValid(insertPage));
|
Assert(BlockNumberIsValid(insertPage));
|
||||||
originalInsertPage = insertPage;
|
originalInsertPage = insertPage;
|
||||||
|
|
||||||
/* Form tuple */
|
/* Form tuple */
|
||||||
itup = index_form_tuple(RelationGetDescr(index), &value, isnull);
|
itup = index_form_tuple(RelationGetDescr(rel), &value, isnull);
|
||||||
itup->t_tid = *heap_tid;
|
itup->t_tid = *heap_tid;
|
||||||
|
|
||||||
/* Get tuple size */
|
/* Get tuple size */
|
||||||
@@ -104,10 +103,10 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, R
|
|||||||
/* Find a page to insert the item */
|
/* Find a page to insert the item */
|
||||||
for (;;)
|
for (;;)
|
||||||
{
|
{
|
||||||
buf = ReadBuffer(index, insertPage);
|
buf = ReadBuffer(rel, insertPage);
|
||||||
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
LockBuffer(buf, BUFFER_LOCK_EXCLUSIVE);
|
||||||
|
|
||||||
state = GenericXLogStart(index);
|
state = GenericXLogStart(rel);
|
||||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||||
|
|
||||||
if (PageGetFreeSpace(page) >= itemsz)
|
if (PageGetFreeSpace(page) >= itemsz)
|
||||||
@@ -127,9 +126,9 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, R
|
|||||||
Page newpage;
|
Page newpage;
|
||||||
|
|
||||||
/* Add a new page */
|
/* Add a new page */
|
||||||
LockRelationForExtension(index, ExclusiveLock);
|
LockRelationForExtension(rel, ExclusiveLock);
|
||||||
newbuf = IvfflatNewBuffer(index, MAIN_FORKNUM);
|
newbuf = IvfflatNewBuffer(rel, MAIN_FORKNUM);
|
||||||
UnlockRelationForExtension(index, ExclusiveLock);
|
UnlockRelationForExtension(rel, ExclusiveLock);
|
||||||
|
|
||||||
/* Init new page */
|
/* Init new page */
|
||||||
newpage = GenericXLogRegisterBuffer(state, newbuf, GENERIC_XLOG_FULL_IMAGE);
|
newpage = GenericXLogRegisterBuffer(state, newbuf, GENERIC_XLOG_FULL_IMAGE);
|
||||||
@@ -142,13 +141,15 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, R
|
|||||||
IvfflatPageGetOpaque(page)->nextblkno = insertPage;
|
IvfflatPageGetOpaque(page)->nextblkno = insertPage;
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(newbuf);
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
|
|
||||||
/* Unlock previous buffer */
|
/* Unlock previous buffer */
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
|
|
||||||
/* Prepare new buffer */
|
/* Prepare new buffer */
|
||||||
state = GenericXLogStart(index);
|
state = GenericXLogStart(rel);
|
||||||
buf = newbuf;
|
buf = newbuf;
|
||||||
page = GenericXLogRegisterBuffer(state, buf, 0);
|
page = GenericXLogRegisterBuffer(state, buf, 0);
|
||||||
break;
|
break;
|
||||||
@@ -157,13 +158,13 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, R
|
|||||||
|
|
||||||
/* Add to next offset */
|
/* Add to next offset */
|
||||||
if (PageAddItem(page, (Item) itup, itemsz, InvalidOffsetNumber, false, false) == InvalidOffsetNumber)
|
if (PageAddItem(page, (Item) itup, itemsz, InvalidOffsetNumber, false, false) == InvalidOffsetNumber)
|
||||||
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(index));
|
elog(ERROR, "failed to add index item to \"%s\"", RelationGetRelationName(rel));
|
||||||
|
|
||||||
IvfflatCommitBuffer(buf, state);
|
IvfflatCommitBuffer(buf, state);
|
||||||
|
|
||||||
/* Update the insert page */
|
/* Update the insert page */
|
||||||
if (insertPage != originalInsertPage)
|
if (insertPage != originalInsertPage)
|
||||||
IvfflatUpdateList(index, listInfo, insertPage, originalInsertPage, InvalidBlockNumber, MAIN_FORKNUM);
|
IvfflatUpdateList(rel, listInfo, insertPage, originalInsertPage, InvalidBlockNumber, MAIN_FORKNUM);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
|
|||||||
@@ -17,6 +17,10 @@ InitCenters(Relation index, VectorArray samples, VectorArray centers, float *low
|
|||||||
FmgrInfo *procinfo;
|
FmgrInfo *procinfo;
|
||||||
Oid collation;
|
Oid collation;
|
||||||
int64 j;
|
int64 j;
|
||||||
|
double distance;
|
||||||
|
double sum;
|
||||||
|
double choice;
|
||||||
|
Vector *vec;
|
||||||
float *weight = palloc(samples->length * sizeof(float));
|
float *weight = palloc(samples->length * sizeof(float));
|
||||||
int numCenters = centers->maxlen;
|
int numCenters = centers->maxlen;
|
||||||
int numSamples = samples->length;
|
int numSamples = samples->length;
|
||||||
@@ -29,21 +33,17 @@ InitCenters(Relation index, VectorArray samples, VectorArray centers, float *low
|
|||||||
centers->length++;
|
centers->length++;
|
||||||
|
|
||||||
for (j = 0; j < numSamples; j++)
|
for (j = 0; j < numSamples; j++)
|
||||||
weight[j] = FLT_MAX;
|
weight[j] = DBL_MAX;
|
||||||
|
|
||||||
for (int i = 0; i < numCenters; i++)
|
for (int i = 0; i < numCenters; i++)
|
||||||
{
|
{
|
||||||
double sum;
|
|
||||||
double choice;
|
|
||||||
|
|
||||||
CHECK_FOR_INTERRUPTS();
|
CHECK_FOR_INTERRUPTS();
|
||||||
|
|
||||||
sum = 0.0;
|
sum = 0.0;
|
||||||
|
|
||||||
for (j = 0; j < numSamples; j++)
|
for (j = 0; j < numSamples; j++)
|
||||||
{
|
{
|
||||||
Vector *vec = VectorArrayGet(samples, j);
|
vec = VectorArrayGet(samples, j);
|
||||||
double distance;
|
|
||||||
|
|
||||||
/* Only need to compute distance for new center */
|
/* Only need to compute distance for new center */
|
||||||
/* TODO Use triangle inequality to reduce distance calculations */
|
/* TODO Use triangle inequality to reduce distance calculations */
|
||||||
@@ -112,6 +112,7 @@ CompareVectors(const void *a, const void *b)
|
|||||||
static void
|
static void
|
||||||
QuickCenters(Relation index, VectorArray samples, VectorArray centers)
|
QuickCenters(Relation index, VectorArray samples, VectorArray centers)
|
||||||
{
|
{
|
||||||
|
Vector *vec;
|
||||||
int dimensions = centers->dim;
|
int dimensions = centers->dim;
|
||||||
Oid collation = index->rd_indcollation[0];
|
Oid collation = index->rd_indcollation[0];
|
||||||
FmgrInfo *normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_KMEANS_NORM_PROC);
|
FmgrInfo *normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_KMEANS_NORM_PROC);
|
||||||
@@ -122,7 +123,7 @@ QuickCenters(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
qsort(samples->items, samples->length, VECTOR_SIZE(samples->dim), CompareVectors);
|
qsort(samples->items, samples->length, VECTOR_SIZE(samples->dim), CompareVectors);
|
||||||
for (int i = 0; i < samples->length; i++)
|
for (int i = 0; i < samples->length; i++)
|
||||||
{
|
{
|
||||||
Vector *vec = VectorArrayGet(samples, i);
|
vec = VectorArrayGet(samples, i);
|
||||||
|
|
||||||
if (i == 0 || CompareVectors(vec, VectorArrayGet(samples, i - 1)) != 0)
|
if (i == 0 || CompareVectors(vec, VectorArrayGet(samples, i - 1)) != 0)
|
||||||
{
|
{
|
||||||
@@ -135,7 +136,7 @@ QuickCenters(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
/* Fill remaining with random data */
|
/* Fill remaining with random data */
|
||||||
while (centers->length < centers->maxlen)
|
while (centers->length < centers->maxlen)
|
||||||
{
|
{
|
||||||
Vector *vec = VectorArrayGet(centers, centers->length);
|
vec = VectorArrayGet(centers, centers->length);
|
||||||
|
|
||||||
SET_VARSIZE(vec, VECTOR_SIZE(dimensions));
|
SET_VARSIZE(vec, VECTOR_SIZE(dimensions));
|
||||||
vec->dim = dimensions;
|
vec->dim = dimensions;
|
||||||
@@ -167,6 +168,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
Oid collation;
|
Oid collation;
|
||||||
Vector *vec;
|
Vector *vec;
|
||||||
Vector *newCenter;
|
Vector *newCenter;
|
||||||
|
int iteration;
|
||||||
int64 j;
|
int64 j;
|
||||||
int64 k;
|
int64 k;
|
||||||
int dimensions = centers->dim;
|
int dimensions = centers->dim;
|
||||||
@@ -180,6 +182,14 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
float *s;
|
float *s;
|
||||||
float *halfcdist;
|
float *halfcdist;
|
||||||
float *newcdist;
|
float *newcdist;
|
||||||
|
int changes;
|
||||||
|
double minDistance;
|
||||||
|
int closestCenter;
|
||||||
|
double distance;
|
||||||
|
bool rj;
|
||||||
|
bool rjreset;
|
||||||
|
double dxcx;
|
||||||
|
double dxc;
|
||||||
|
|
||||||
/* Calculate allocation sizes */
|
/* Calculate allocation sizes */
|
||||||
Size samplesSize = VECTOR_ARRAY_SIZE(samples->maxlen, samples->dim);
|
Size samplesSize = VECTOR_ARRAY_SIZE(samples->maxlen, samples->dim);
|
||||||
@@ -237,14 +247,14 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
/* Assign each x to its closest initial center c(x) = argmin d(x,c) */
|
/* Assign each x to its closest initial center c(x) = argmin d(x,c) */
|
||||||
for (j = 0; j < numSamples; j++)
|
for (j = 0; j < numSamples; j++)
|
||||||
{
|
{
|
||||||
float minDistance = FLT_MAX;
|
minDistance = DBL_MAX;
|
||||||
int closestCenter = 0;
|
closestCenter = 0;
|
||||||
|
|
||||||
/* Find closest center */
|
/* Find closest center */
|
||||||
for (k = 0; k < numCenters; k++)
|
for (k = 0; k < numCenters; k++)
|
||||||
{
|
{
|
||||||
/* TODO Use Lemma 1 in k-means++ initialization */
|
/* TODO Use Lemma 1 in k-means++ initialization */
|
||||||
float distance = lowerBound[j * numCenters + k];
|
distance = lowerBound[j * numCenters + k];
|
||||||
|
|
||||||
if (distance < minDistance)
|
if (distance < minDistance)
|
||||||
{
|
{
|
||||||
@@ -258,14 +268,13 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
}
|
}
|
||||||
|
|
||||||
/* Give 500 iterations to converge */
|
/* Give 500 iterations to converge */
|
||||||
for (int iteration = 0; iteration < 500; iteration++)
|
for (iteration = 0; iteration < 500; iteration++)
|
||||||
{
|
{
|
||||||
int changes = 0;
|
|
||||||
bool rjreset;
|
|
||||||
|
|
||||||
/* Can take a while, so ensure we can interrupt */
|
/* Can take a while, so ensure we can interrupt */
|
||||||
CHECK_FOR_INTERRUPTS();
|
CHECK_FOR_INTERRUPTS();
|
||||||
|
|
||||||
|
changes = 0;
|
||||||
|
|
||||||
/* Step 1: For all centers, compute distance */
|
/* Step 1: For all centers, compute distance */
|
||||||
for (j = 0; j < numCenters; j++)
|
for (j = 0; j < numCenters; j++)
|
||||||
{
|
{
|
||||||
@@ -273,8 +282,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
|
|
||||||
for (k = j + 1; k < numCenters; k++)
|
for (k = j + 1; k < numCenters; k++)
|
||||||
{
|
{
|
||||||
float distance = 0.5 * DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k))));
|
distance = 0.5 * DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k))));
|
||||||
|
|
||||||
halfcdist[j * numCenters + k] = distance;
|
halfcdist[j * numCenters + k] = distance;
|
||||||
halfcdist[k * numCenters + j] = distance;
|
halfcdist[k * numCenters + j] = distance;
|
||||||
}
|
}
|
||||||
@@ -283,12 +291,10 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
/* For all centers c, compute s(c) */
|
/* For all centers c, compute s(c) */
|
||||||
for (j = 0; j < numCenters; j++)
|
for (j = 0; j < numCenters; j++)
|
||||||
{
|
{
|
||||||
float minDistance = FLT_MAX;
|
minDistance = DBL_MAX;
|
||||||
|
|
||||||
for (k = 0; k < numCenters; k++)
|
for (k = 0; k < numCenters; k++)
|
||||||
{
|
{
|
||||||
float distance;
|
|
||||||
|
|
||||||
if (j == k)
|
if (j == k)
|
||||||
continue;
|
continue;
|
||||||
|
|
||||||
@@ -304,8 +310,6 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
|
|
||||||
for (j = 0; j < numSamples; j++)
|
for (j = 0; j < numSamples; j++)
|
||||||
{
|
{
|
||||||
bool rj;
|
|
||||||
|
|
||||||
/* Step 2: Identify all points x such that u(x) <= s(c(x)) */
|
/* Step 2: Identify all points x such that u(x) <= s(c(x)) */
|
||||||
if (upperBound[j] <= s[closestCenters[j]])
|
if (upperBound[j] <= s[closestCenters[j]])
|
||||||
continue;
|
continue;
|
||||||
@@ -314,8 +318,6 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
|
|
||||||
for (k = 0; k < numCenters; k++)
|
for (k = 0; k < numCenters; k++)
|
||||||
{
|
{
|
||||||
float dxcx;
|
|
||||||
|
|
||||||
/* Step 3: For all remaining points x and centers c */
|
/* Step 3: For all remaining points x and centers c */
|
||||||
if (k == closestCenters[j])
|
if (k == closestCenters[j])
|
||||||
continue;
|
continue;
|
||||||
@@ -345,7 +347,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
/* Step 3b */
|
/* Step 3b */
|
||||||
if (dxcx > lowerBound[j * numCenters + k] || dxcx > halfcdist[closestCenters[j] * numCenters + k])
|
if (dxcx > lowerBound[j * numCenters + k] || dxcx > halfcdist[closestCenters[j] * numCenters + k])
|
||||||
{
|
{
|
||||||
float dxc = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k))));
|
dxc = DatumGetFloat8(FunctionCall2Coll(procinfo, collation, PointerGetDatum(vec), PointerGetDatum(VectorArrayGet(centers, k))));
|
||||||
|
|
||||||
/* d(x,c) calculated */
|
/* d(x,c) calculated */
|
||||||
lowerBound[j * numCenters + k] = dxc;
|
lowerBound[j * numCenters + k] = dxc;
|
||||||
@@ -359,6 +361,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
|
|
||||||
changes++;
|
changes++;
|
||||||
}
|
}
|
||||||
|
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
@@ -375,8 +378,6 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
|
|
||||||
for (j = 0; j < numSamples; j++)
|
for (j = 0; j < numSamples; j++)
|
||||||
{
|
{
|
||||||
int closestCenter;
|
|
||||||
|
|
||||||
vec = VectorArrayGet(samples, j);
|
vec = VectorArrayGet(samples, j);
|
||||||
closestCenter = closestCenters[j];
|
closestCenter = closestCenters[j];
|
||||||
|
|
||||||
@@ -425,7 +426,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
{
|
{
|
||||||
for (k = 0; k < numCenters; k++)
|
for (k = 0; k < numCenters; k++)
|
||||||
{
|
{
|
||||||
float distance = lowerBound[j * numCenters + k] - newcdist[k];
|
distance = lowerBound[j * numCenters + k] - newcdist[k];
|
||||||
|
|
||||||
if (distance < 0)
|
if (distance < 0)
|
||||||
distance = 0;
|
distance = 0;
|
||||||
@@ -441,7 +442,7 @@ ElkanKmeans(Relation index, VectorArray samples, VectorArray centers)
|
|||||||
|
|
||||||
/* Step 7 */
|
/* Step 7 */
|
||||||
for (j = 0; j < numCenters; j++)
|
for (j = 0; j < numCenters; j++)
|
||||||
VectorArraySet(centers, j, VectorArrayGet(newCenters, j));
|
memcpy(VectorArrayGet(centers, j), VectorArrayGet(newCenters, j), VECTOR_SIZE(dimensions));
|
||||||
|
|
||||||
if (changes == 0 && iteration != 0)
|
if (changes == 0 && iteration != 0)
|
||||||
break;
|
break;
|
||||||
@@ -464,6 +465,9 @@ static void
|
|||||||
CheckCenters(Relation index, VectorArray centers)
|
CheckCenters(Relation index, VectorArray centers)
|
||||||
{
|
{
|
||||||
FmgrInfo *normprocinfo;
|
FmgrInfo *normprocinfo;
|
||||||
|
Oid collation;
|
||||||
|
Vector *vec;
|
||||||
|
double norm;
|
||||||
|
|
||||||
if (centers->length != centers->maxlen)
|
if (centers->length != centers->maxlen)
|
||||||
elog(ERROR, "Not enough centers. Please report a bug.");
|
elog(ERROR, "Not enough centers. Please report a bug.");
|
||||||
@@ -471,7 +475,7 @@ CheckCenters(Relation index, VectorArray centers)
|
|||||||
/* Ensure no NaN or infinite values */
|
/* Ensure no NaN or infinite values */
|
||||||
for (int i = 0; i < centers->length; i++)
|
for (int i = 0; i < centers->length; i++)
|
||||||
{
|
{
|
||||||
Vector *vec = VectorArrayGet(centers, i);
|
vec = VectorArrayGet(centers, i);
|
||||||
|
|
||||||
for (int j = 0; j < vec->dim; j++)
|
for (int j = 0; j < vec->dim; j++)
|
||||||
{
|
{
|
||||||
@@ -497,12 +501,11 @@ CheckCenters(Relation index, VectorArray centers)
|
|||||||
normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_NORM_PROC);
|
normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_NORM_PROC);
|
||||||
if (normprocinfo != NULL)
|
if (normprocinfo != NULL)
|
||||||
{
|
{
|
||||||
Oid collation = index->rd_indcollation[0];
|
collation = index->rd_indcollation[0];
|
||||||
|
|
||||||
for (int i = 0; i < centers->length; i++)
|
for (int i = 0; i < centers->length; i++)
|
||||||
{
|
{
|
||||||
double norm = DatumGetFloat8(FunctionCall1Coll(normprocinfo, collation, PointerGetDatum(VectorArrayGet(centers, i))));
|
norm = DatumGetFloat8(FunctionCall1Coll(normprocinfo, collation, PointerGetDatum(VectorArrayGet(centers, i))));
|
||||||
|
|
||||||
if (norm == 0)
|
if (norm == 0)
|
||||||
elog(ERROR, "Zero norm detected. Please report a bug.");
|
elog(ERROR, "Zero norm detected. Please report a bug.");
|
||||||
}
|
}
|
||||||
|
|||||||
124
src/ivfscan.c
124
src/ivfscan.c
@@ -31,36 +31,36 @@ CompareLists(const pairingheap_node *a, const pairingheap_node *b, void *arg)
|
|||||||
static void
|
static void
|
||||||
GetScanLists(IndexScanDesc scan, Datum value)
|
GetScanLists(IndexScanDesc scan, Datum value)
|
||||||
{
|
{
|
||||||
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
|
Buffer cbuf;
|
||||||
|
Page cpage;
|
||||||
|
IvfflatList list;
|
||||||
|
OffsetNumber offno;
|
||||||
|
OffsetNumber maxoffno;
|
||||||
BlockNumber nextblkno = IVFFLAT_HEAD_BLKNO;
|
BlockNumber nextblkno = IVFFLAT_HEAD_BLKNO;
|
||||||
int listCount = 0;
|
int listCount = 0;
|
||||||
|
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
|
||||||
|
double distance;
|
||||||
|
IvfflatScanList *scanlist;
|
||||||
double maxDistance = DBL_MAX;
|
double maxDistance = DBL_MAX;
|
||||||
|
|
||||||
/* Search all list pages */
|
/* Search all list pages */
|
||||||
while (BlockNumberIsValid(nextblkno))
|
while (BlockNumberIsValid(nextblkno))
|
||||||
{
|
{
|
||||||
Buffer cbuf;
|
|
||||||
Page cpage;
|
|
||||||
OffsetNumber maxoffno;
|
|
||||||
|
|
||||||
cbuf = ReadBuffer(scan->indexRelation, nextblkno);
|
cbuf = ReadBuffer(scan->indexRelation, nextblkno);
|
||||||
LockBuffer(cbuf, BUFFER_LOCK_SHARE);
|
LockBuffer(cbuf, BUFFER_LOCK_SHARE);
|
||||||
cpage = BufferGetPage(cbuf);
|
cpage = BufferGetPage(cbuf);
|
||||||
|
|
||||||
maxoffno = PageGetMaxOffsetNumber(cpage);
|
maxoffno = PageGetMaxOffsetNumber(cpage);
|
||||||
|
|
||||||
for (OffsetNumber offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||||
{
|
{
|
||||||
IvfflatList list = (IvfflatList) PageGetItem(cpage, PageGetItemId(cpage, offno));
|
list = (IvfflatList) PageGetItem(cpage, PageGetItemId(cpage, offno));
|
||||||
double distance;
|
|
||||||
|
|
||||||
/* Use procinfo from the index instead of scan key for performance */
|
/* Use procinfo from the index instead of scan key for performance */
|
||||||
distance = DatumGetFloat8(FunctionCall2Coll(so->procinfo, so->collation, PointerGetDatum(&list->center), value));
|
distance = DatumGetFloat8(FunctionCall2Coll(so->procinfo, so->collation, PointerGetDatum(&list->center), value));
|
||||||
|
|
||||||
if (listCount < so->probes)
|
if (listCount < so->probes)
|
||||||
{
|
{
|
||||||
IvfflatScanList *scanlist;
|
|
||||||
|
|
||||||
scanlist = &so->lists[listCount];
|
scanlist = &so->lists[listCount];
|
||||||
scanlist->startPage = list->startPage;
|
scanlist->startPage = list->startPage;
|
||||||
scanlist->distance = distance;
|
scanlist->distance = distance;
|
||||||
@@ -75,8 +75,6 @@ GetScanLists(IndexScanDesc scan, Datum value)
|
|||||||
}
|
}
|
||||||
else if (distance < maxDistance)
|
else if (distance < maxDistance)
|
||||||
{
|
{
|
||||||
IvfflatScanList *scanlist;
|
|
||||||
|
|
||||||
/* Remove */
|
/* Remove */
|
||||||
scanlist = (IvfflatScanList *) pairingheap_remove_first(so->listQueue);
|
scanlist = (IvfflatScanList *) pairingheap_remove_first(so->listQueue);
|
||||||
|
|
||||||
@@ -103,6 +101,14 @@ static void
|
|||||||
GetScanItems(IndexScanDesc scan, Datum value)
|
GetScanItems(IndexScanDesc scan, Datum value)
|
||||||
{
|
{
|
||||||
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
|
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
|
||||||
|
Buffer buf;
|
||||||
|
Page page;
|
||||||
|
IndexTuple itup;
|
||||||
|
BlockNumber searchPage;
|
||||||
|
OffsetNumber offno;
|
||||||
|
OffsetNumber maxoffno;
|
||||||
|
Datum datum;
|
||||||
|
bool isnull;
|
||||||
TupleDesc tupdesc = RelationGetDescr(scan->indexRelation);
|
TupleDesc tupdesc = RelationGetDescr(scan->indexRelation);
|
||||||
double tuples = 0;
|
double tuples = 0;
|
||||||
|
|
||||||
@@ -122,32 +128,19 @@ GetScanItems(IndexScanDesc scan, Datum value)
|
|||||||
/* Search closest probes lists */
|
/* Search closest probes lists */
|
||||||
while (!pairingheap_is_empty(so->listQueue))
|
while (!pairingheap_is_empty(so->listQueue))
|
||||||
{
|
{
|
||||||
BlockNumber searchPage = ((IvfflatScanList *) pairingheap_remove_first(so->listQueue))->startPage;
|
searchPage = ((IvfflatScanList *) pairingheap_remove_first(so->listQueue))->startPage;
|
||||||
|
|
||||||
/* Search all entry pages for list */
|
/* Search all entry pages for list */
|
||||||
while (BlockNumberIsValid(searchPage))
|
while (BlockNumberIsValid(searchPage))
|
||||||
{
|
{
|
||||||
Buffer buf;
|
|
||||||
Page page;
|
|
||||||
OffsetNumber maxoffno;
|
|
||||||
|
|
||||||
buf = ReadBufferExtended(scan->indexRelation, MAIN_FORKNUM, searchPage, RBM_NORMAL, bas);
|
buf = ReadBufferExtended(scan->indexRelation, MAIN_FORKNUM, searchPage, RBM_NORMAL, bas);
|
||||||
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
||||||
page = BufferGetPage(buf);
|
page = BufferGetPage(buf);
|
||||||
maxoffno = PageGetMaxOffsetNumber(page);
|
maxoffno = PageGetMaxOffsetNumber(page);
|
||||||
|
|
||||||
for (OffsetNumber offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
for (offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
||||||
{
|
{
|
||||||
IndexTuple itup;
|
itup = (IndexTuple) PageGetItem(page, PageGetItemId(page, offno));
|
||||||
Datum datum;
|
|
||||||
bool isnull;
|
|
||||||
ItemId itemid = PageGetItemId(page, offno);
|
|
||||||
|
|
||||||
/* Skip dead tuples */
|
|
||||||
if (scan->ignore_killed_tuples && ItemIdIsDead(itemid))
|
|
||||||
continue;
|
|
||||||
|
|
||||||
itup = (IndexTuple) PageGetItem(page, itemid);
|
|
||||||
datum = index_getattr(itup, 1, tupdesc, &isnull);
|
datum = index_getattr(itup, 1, tupdesc, &isnull);
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -188,52 +181,26 @@ GetScanItems(IndexScanDesc scan, Datum value)
|
|||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Mark prior tuple as dead
|
* Get dimensions from metapage
|
||||||
*/
|
*/
|
||||||
static void
|
static int
|
||||||
MarkPriorTupleDead(IndexScanDesc scan)
|
GetDimensions(Relation index)
|
||||||
{
|
{
|
||||||
IvfflatScanOpaque so = (IvfflatScanOpaque) scan->opaque;
|
Buffer buf;
|
||||||
Buffer buf = so->buf;
|
|
||||||
Page page;
|
Page page;
|
||||||
OffsetNumber maxoffno;
|
IvfflatMetaPage metap;
|
||||||
|
int dimensions;
|
||||||
|
|
||||||
/* Safety check */
|
buf = ReadBuffer(index, IVFFLAT_METAPAGE_BLKNO);
|
||||||
if (!BufferIsValid(so->buf) || !ItemPointerIsValid(&so->heaptid))
|
|
||||||
return;
|
|
||||||
|
|
||||||
/* Only a shared locked is needed for ItemIdMarkDead */
|
|
||||||
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
||||||
page = BufferGetPage(buf);
|
page = BufferGetPage(buf);
|
||||||
maxoffno = PageGetMaxOffsetNumber(page);
|
metap = IvfflatPageGetMeta(page);
|
||||||
|
|
||||||
for (OffsetNumber offno = FirstOffsetNumber; offno <= maxoffno; offno = OffsetNumberNext(offno))
|
dimensions = metap->dimensions;
|
||||||
{
|
|
||||||
ItemId itemid = PageGetItemId(page, offno);
|
|
||||||
IndexTuple itup = (IndexTuple) PageGetItem(page, itemid);
|
|
||||||
|
|
||||||
/*
|
UnlockReleaseBuffer(buf);
|
||||||
* Find tuple. Since buffer has been pinned, tuple cannot have been
|
|
||||||
* vacuumed (and heap TID reused).
|
|
||||||
*/
|
|
||||||
if (ItemPointerEquals(&itup->t_tid, &so->heaptid))
|
|
||||||
{
|
|
||||||
/*
|
|
||||||
* Make sure tuple has not already been marked dead to avoid extra
|
|
||||||
* WAL if wal_log_hints or data checksums enabled
|
|
||||||
*/
|
|
||||||
if (!ItemIdIsDead(itemid))
|
|
||||||
{
|
|
||||||
ItemIdMarkDead(itemid);
|
|
||||||
MarkBufferDirtyHint(buf, true);
|
|
||||||
}
|
|
||||||
|
|
||||||
break;
|
return dimensions;
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
/* Unlock buffer */
|
|
||||||
LockBuffer(buf, BUFFER_LOCK_UNLOCK);
|
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -245,7 +212,6 @@ ivfflatbeginscan(Relation index, int nkeys, int norderbys)
|
|||||||
IndexScanDesc scan;
|
IndexScanDesc scan;
|
||||||
IvfflatScanOpaque so;
|
IvfflatScanOpaque so;
|
||||||
int lists;
|
int lists;
|
||||||
int dimensions;
|
|
||||||
AttrNumber attNums[] = {1};
|
AttrNumber attNums[] = {1};
|
||||||
Oid sortOperators[] = {Float8LessOperator};
|
Oid sortOperators[] = {Float8LessOperator};
|
||||||
Oid sortCollations[] = {InvalidOid};
|
Oid sortCollations[] = {InvalidOid};
|
||||||
@@ -253,9 +219,7 @@ ivfflatbeginscan(Relation index, int nkeys, int norderbys)
|
|||||||
int probes = ivfflat_probes;
|
int probes = ivfflat_probes;
|
||||||
|
|
||||||
scan = RelationGetIndexScan(index, nkeys, norderbys);
|
scan = RelationGetIndexScan(index, nkeys, norderbys);
|
||||||
|
lists = IvfflatGetLists(scan->indexRelation);
|
||||||
/* Get lists and dimensions from metapage */
|
|
||||||
IvfflatGetMetaPageInfo(index, &lists, &dimensions);
|
|
||||||
|
|
||||||
if (probes > lists)
|
if (probes > lists)
|
||||||
probes = lists;
|
probes = lists;
|
||||||
@@ -263,9 +227,7 @@ ivfflatbeginscan(Relation index, int nkeys, int norderbys)
|
|||||||
so = (IvfflatScanOpaque) palloc(offsetof(IvfflatScanOpaqueData, lists) + probes * sizeof(IvfflatScanList));
|
so = (IvfflatScanOpaque) palloc(offsetof(IvfflatScanOpaqueData, lists) + probes * sizeof(IvfflatScanList));
|
||||||
so->buf = InvalidBuffer;
|
so->buf = InvalidBuffer;
|
||||||
so->first = true;
|
so->first = true;
|
||||||
ItemPointerSetInvalid(&so->heaptid);
|
|
||||||
so->probes = probes;
|
so->probes = probes;
|
||||||
so->dimensions = dimensions;
|
|
||||||
|
|
||||||
/* Set support functions */
|
/* Set support functions */
|
||||||
so->procinfo = index_getprocinfo(index, 1, IVFFLAT_DISTANCE_PROC);
|
so->procinfo = index_getprocinfo(index, 1, IVFFLAT_DISTANCE_PROC);
|
||||||
@@ -279,7 +241,7 @@ ivfflatbeginscan(Relation index, int nkeys, int norderbys)
|
|||||||
so->tupdesc = CreateTemplateTupleDesc(3, false);
|
so->tupdesc = CreateTemplateTupleDesc(3, false);
|
||||||
#endif
|
#endif
|
||||||
TupleDescInitEntry(so->tupdesc, (AttrNumber) 1, "distance", FLOAT8OID, -1, 0);
|
TupleDescInitEntry(so->tupdesc, (AttrNumber) 1, "distance", FLOAT8OID, -1, 0);
|
||||||
TupleDescInitEntry(so->tupdesc, (AttrNumber) 2, "heaptid", TIDOID, -1, 0);
|
TupleDescInitEntry(so->tupdesc, (AttrNumber) 2, "tid", TIDOID, -1, 0);
|
||||||
TupleDescInitEntry(so->tupdesc, (AttrNumber) 3, "indexblkno", INT4OID, -1, 0);
|
TupleDescInitEntry(so->tupdesc, (AttrNumber) 3, "indexblkno", INT4OID, -1, 0);
|
||||||
|
|
||||||
/* Prep sort */
|
/* Prep sort */
|
||||||
@@ -312,7 +274,6 @@ ivfflatrescan(IndexScanDesc scan, ScanKey keys, int nkeys, ScanKey orderbys, int
|
|||||||
#endif
|
#endif
|
||||||
|
|
||||||
so->first = true;
|
so->first = true;
|
||||||
ItemPointerSetInvalid(&so->heaptid);
|
|
||||||
pairingheap_reset(so->listQueue);
|
pairingheap_reset(so->listQueue);
|
||||||
|
|
||||||
if (keys && scan->numberOfKeys > 0)
|
if (keys && scan->numberOfKeys > 0)
|
||||||
@@ -348,7 +309,7 @@ ivfflatgettuple(IndexScanDesc scan, ScanDirection dir)
|
|||||||
elog(ERROR, "cannot scan ivfflat index without order");
|
elog(ERROR, "cannot scan ivfflat index without order");
|
||||||
|
|
||||||
if (scan->orderByData->sk_flags & SK_ISNULL)
|
if (scan->orderByData->sk_flags & SK_ISNULL)
|
||||||
value = PointerGetDatum(InitVector(so->dimensions));
|
value = PointerGetDatum(InitVector(GetDimensions(scan->indexRelation)));
|
||||||
else
|
else
|
||||||
{
|
{
|
||||||
value = scan->orderByData->sk_argument;
|
value = scan->orderByData->sk_argument;
|
||||||
@@ -370,27 +331,18 @@ ivfflatgettuple(IndexScanDesc scan, ScanDirection dir)
|
|||||||
if (value != scan->orderByData->sk_argument)
|
if (value != scan->orderByData->sk_argument)
|
||||||
pfree(DatumGetPointer(value));
|
pfree(DatumGetPointer(value));
|
||||||
}
|
}
|
||||||
else
|
|
||||||
{
|
|
||||||
/* Mark prior tuple as dead */
|
|
||||||
if (scan->kill_prior_tuple)
|
|
||||||
MarkPriorTupleDead(scan);
|
|
||||||
}
|
|
||||||
|
|
||||||
if (tuplesort_gettupleslot(so->sortstate, true, false, so->slot, NULL))
|
if (tuplesort_gettupleslot(so->sortstate, true, false, so->slot, NULL))
|
||||||
{
|
{
|
||||||
ItemPointer heaptid = (ItemPointer) DatumGetPointer(slot_getattr(so->slot, 2, &so->isnull));
|
ItemPointer tid = (ItemPointer) DatumGetPointer(slot_getattr(so->slot, 2, &so->isnull));
|
||||||
BlockNumber indexblkno = DatumGetInt32(slot_getattr(so->slot, 3, &so->isnull));
|
BlockNumber indexblkno = DatumGetInt32(slot_getattr(so->slot, 3, &so->isnull));
|
||||||
|
|
||||||
#if PG_VERSION_NUM >= 120000
|
#if PG_VERSION_NUM >= 120000
|
||||||
scan->xs_heaptid = *heaptid;
|
scan->xs_heaptid = *tid;
|
||||||
#else
|
#else
|
||||||
scan->xs_ctup.t_self = *heaptid;
|
scan->xs_ctup.t_self = *tid;
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
/* Keep track of info needed to mark tuple as dead */
|
|
||||||
so->heaptid = *heaptid;
|
|
||||||
|
|
||||||
/* Unpin buffer */
|
/* Unpin buffer */
|
||||||
if (BufferIsValid(so->buf))
|
if (BufferIsValid(so->buf))
|
||||||
ReleaseBuffer(so->buf);
|
ReleaseBuffer(so->buf);
|
||||||
|
|||||||
@@ -57,12 +57,12 @@ IvfflatGetLists(Relation index)
|
|||||||
* Get proc
|
* Get proc
|
||||||
*/
|
*/
|
||||||
FmgrInfo *
|
FmgrInfo *
|
||||||
IvfflatOptionalProcInfo(Relation index, uint16 procnum)
|
IvfflatOptionalProcInfo(Relation rel, uint16 procnum)
|
||||||
{
|
{
|
||||||
if (!OidIsValid(index_getprocid(index, 1, procnum)))
|
if (!OidIsValid(index_getprocid(rel, 1, procnum)))
|
||||||
return NULL;
|
return NULL;
|
||||||
|
|
||||||
return index_getprocinfo(index, 1, procnum);
|
return index_getprocinfo(rel, 1, procnum);
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
@@ -136,6 +136,7 @@ IvfflatInitRegisterPage(Relation index, Buffer *buf, Page *page, GenericXLogStat
|
|||||||
void
|
void
|
||||||
IvfflatCommitBuffer(Buffer buf, GenericXLogState *state)
|
IvfflatCommitBuffer(Buffer buf, GenericXLogState *state)
|
||||||
{
|
{
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
UnlockReleaseBuffer(buf);
|
UnlockReleaseBuffer(buf);
|
||||||
}
|
}
|
||||||
@@ -159,6 +160,8 @@ IvfflatAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **st
|
|||||||
IvfflatInitPage(newbuf, newpage);
|
IvfflatInitPage(newbuf, newpage);
|
||||||
|
|
||||||
/* Commit */
|
/* Commit */
|
||||||
|
MarkBufferDirty(*buf);
|
||||||
|
MarkBufferDirty(newbuf);
|
||||||
GenericXLogFinish(*state);
|
GenericXLogFinish(*state);
|
||||||
|
|
||||||
/* Unlock */
|
/* Unlock */
|
||||||
@@ -169,29 +172,6 @@ IvfflatAppendPage(Relation index, Buffer *buf, Page *page, GenericXLogState **st
|
|||||||
*buf = newbuf;
|
*buf = newbuf;
|
||||||
}
|
}
|
||||||
|
|
||||||
/*
|
|
||||||
* Get the metapage info
|
|
||||||
*/
|
|
||||||
void
|
|
||||||
IvfflatGetMetaPageInfo(Relation index, int *lists, int *dimensions)
|
|
||||||
{
|
|
||||||
Buffer buf;
|
|
||||||
Page page;
|
|
||||||
IvfflatMetaPage metap;
|
|
||||||
|
|
||||||
buf = ReadBuffer(index, IVFFLAT_METAPAGE_BLKNO);
|
|
||||||
LockBuffer(buf, BUFFER_LOCK_SHARE);
|
|
||||||
page = BufferGetPage(buf);
|
|
||||||
metap = IvfflatPageGetMeta(page);
|
|
||||||
|
|
||||||
*lists = metap->lists;
|
|
||||||
|
|
||||||
if (dimensions != NULL)
|
|
||||||
*dimensions = metap->dimensions;
|
|
||||||
|
|
||||||
UnlockReleaseBuffer(buf);
|
|
||||||
}
|
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Update the start or insert page of a list
|
* Update the start or insert page of a list
|
||||||
*/
|
*/
|
||||||
|
|||||||
@@ -107,6 +107,7 @@ ivfflatbulkdelete(IndexVacuumInfo *info, IndexBulkDeleteResult *stats,
|
|||||||
{
|
{
|
||||||
/* Delete tuples */
|
/* Delete tuples */
|
||||||
PageIndexMultiDelete(page, deletable, ndeletable);
|
PageIndexMultiDelete(page, deletable, ndeletable);
|
||||||
|
MarkBufferDirty(buf);
|
||||||
GenericXLogFinish(state);
|
GenericXLogFinish(state);
|
||||||
}
|
}
|
||||||
else
|
else
|
||||||
|
|||||||
43
src/vector.c
43
src/vector.c
@@ -684,6 +684,49 @@ cosine_distance(PG_FUNCTION_ARGS)
|
|||||||
PG_RETURN_FLOAT8(1.0 - similarity);
|
PG_RETURN_FLOAT8(1.0 - similarity);
|
||||||
}
|
}
|
||||||
|
|
||||||
|
/*
|
||||||
|
* Get the angular distance between two vectors
|
||||||
|
*/
|
||||||
|
PGDLLEXPORT PG_FUNCTION_INFO_V1(angular_distance);
|
||||||
|
Datum
|
||||||
|
angular_distance(PG_FUNCTION_ARGS)
|
||||||
|
{
|
||||||
|
Vector *a = PG_GETARG_VECTOR_P(0);
|
||||||
|
Vector *b = PG_GETARG_VECTOR_P(1);
|
||||||
|
float *ax = a->x;
|
||||||
|
float *bx = b->x;
|
||||||
|
float distance = 0.0;
|
||||||
|
float norma = 0.0;
|
||||||
|
float normb = 0.0;
|
||||||
|
double similarity;
|
||||||
|
|
||||||
|
CheckDims(a, b);
|
||||||
|
|
||||||
|
/* Auto-vectorized */
|
||||||
|
for (int i = 0; i < a->dim; i++)
|
||||||
|
{
|
||||||
|
distance += ax[i] * bx[i];
|
||||||
|
norma += ax[i] * ax[i];
|
||||||
|
normb += bx[i] * bx[i];
|
||||||
|
}
|
||||||
|
|
||||||
|
similarity = (double) distance / sqrt((double) norma * (double) normb);
|
||||||
|
|
||||||
|
#ifdef _MSC_VER
|
||||||
|
/* /fp:fast may not propagate NaN */
|
||||||
|
if (isnan(similarity))
|
||||||
|
PG_RETURN_FLOAT8(NAN);
|
||||||
|
#endif
|
||||||
|
|
||||||
|
/* Prevent NaN with acos with loss of precision */
|
||||||
|
if (similarity > 1)
|
||||||
|
similarity = 1;
|
||||||
|
else if (similarity < -1)
|
||||||
|
similarity = -1;
|
||||||
|
|
||||||
|
PG_RETURN_FLOAT8(acos(similarity) / M_PI);
|
||||||
|
}
|
||||||
|
|
||||||
/*
|
/*
|
||||||
* Get the distance for spherical k-means
|
* Get the distance for spherical k-means
|
||||||
* Currently uses angular distance since needs to satisfy triangle inequality
|
* Currently uses angular distance since needs to satisfy triangle inequality
|
||||||
|
|||||||
@@ -106,12 +106,6 @@ SELECT cosine_distance('[1,1]', '[1,1]');
|
|||||||
0
|
0
|
||||||
(1 row)
|
(1 row)
|
||||||
|
|
||||||
SELECT cosine_distance('[1,0]', '[0,2]');
|
|
||||||
cosine_distance
|
|
||||||
-----------------
|
|
||||||
1
|
|
||||||
(1 row)
|
|
||||||
|
|
||||||
SELECT cosine_distance('[1,1]', '[-1,-1]');
|
SELECT cosine_distance('[1,1]', '[-1,-1]');
|
||||||
cosine_distance
|
cosine_distance
|
||||||
-----------------
|
-----------------
|
||||||
@@ -158,6 +152,56 @@ SELECT l1_distance('[3e38]', '[-3e38]');
|
|||||||
Infinity
|
Infinity
|
||||||
(1 row)
|
(1 row)
|
||||||
|
|
||||||
|
SELECT angular_distance('[1,2]', '[2,4]');
|
||||||
|
angular_distance
|
||||||
|
------------------
|
||||||
|
0
|
||||||
|
(1 row)
|
||||||
|
|
||||||
|
SELECT angular_distance('[1,2]', '[0,0]');
|
||||||
|
angular_distance
|
||||||
|
------------------
|
||||||
|
NaN
|
||||||
|
(1 row)
|
||||||
|
|
||||||
|
SELECT angular_distance('[1,1]', '[1,1]');
|
||||||
|
angular_distance
|
||||||
|
------------------
|
||||||
|
0
|
||||||
|
(1 row)
|
||||||
|
|
||||||
|
SELECT angular_distance('[1,0]', '[0,2]');
|
||||||
|
angular_distance
|
||||||
|
------------------
|
||||||
|
0.5
|
||||||
|
(1 row)
|
||||||
|
|
||||||
|
SELECT angular_distance('[1,1]', '[-1,-1]');
|
||||||
|
angular_distance
|
||||||
|
------------------
|
||||||
|
1
|
||||||
|
(1 row)
|
||||||
|
|
||||||
|
SELECT angular_distance('[1,2]', '[3]');
|
||||||
|
ERROR: different vector dimensions 2 and 1
|
||||||
|
SELECT angular_distance('[1,1]', '[1.1,1.1]');
|
||||||
|
angular_distance
|
||||||
|
------------------
|
||||||
|
0
|
||||||
|
(1 row)
|
||||||
|
|
||||||
|
SELECT angular_distance('[1,1]', '[-1.1,-1.1]');
|
||||||
|
angular_distance
|
||||||
|
------------------
|
||||||
|
1
|
||||||
|
(1 row)
|
||||||
|
|
||||||
|
SELECT angular_distance('[3e38]', '[3e38]');
|
||||||
|
angular_distance
|
||||||
|
------------------
|
||||||
|
NaN
|
||||||
|
(1 row)
|
||||||
|
|
||||||
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v;
|
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v;
|
||||||
avg
|
avg
|
||||||
-----------
|
-----------
|
||||||
|
|||||||
@@ -25,7 +25,6 @@ SELECT inner_product('[3e38]', '[3e38]');
|
|||||||
SELECT cosine_distance('[1,2]', '[2,4]');
|
SELECT cosine_distance('[1,2]', '[2,4]');
|
||||||
SELECT cosine_distance('[1,2]', '[0,0]');
|
SELECT cosine_distance('[1,2]', '[0,0]');
|
||||||
SELECT cosine_distance('[1,1]', '[1,1]');
|
SELECT cosine_distance('[1,1]', '[1,1]');
|
||||||
SELECT cosine_distance('[1,0]', '[0,2]');
|
|
||||||
SELECT cosine_distance('[1,1]', '[-1,-1]');
|
SELECT cosine_distance('[1,1]', '[-1,-1]');
|
||||||
SELECT cosine_distance('[1,2]', '[3]');
|
SELECT cosine_distance('[1,2]', '[3]');
|
||||||
SELECT cosine_distance('[1,1]', '[1.1,1.1]');
|
SELECT cosine_distance('[1,1]', '[1.1,1.1]');
|
||||||
@@ -37,6 +36,16 @@ SELECT l1_distance('[0,0]', '[0,1]');
|
|||||||
SELECT l1_distance('[1,2]', '[3]');
|
SELECT l1_distance('[1,2]', '[3]');
|
||||||
SELECT l1_distance('[3e38]', '[-3e38]');
|
SELECT l1_distance('[3e38]', '[-3e38]');
|
||||||
|
|
||||||
|
SELECT angular_distance('[1,2]', '[2,4]');
|
||||||
|
SELECT angular_distance('[1,2]', '[0,0]');
|
||||||
|
SELECT angular_distance('[1,1]', '[1,1]');
|
||||||
|
SELECT angular_distance('[1,0]', '[0,2]');
|
||||||
|
SELECT angular_distance('[1,1]', '[-1,-1]');
|
||||||
|
SELECT angular_distance('[1,2]', '[3]');
|
||||||
|
SELECT angular_distance('[1,1]', '[1.1,1.1]');
|
||||||
|
SELECT angular_distance('[1,1]', '[-1.1,-1.1]');
|
||||||
|
SELECT angular_distance('[3e38]', '[3e38]');
|
||||||
|
|
||||||
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v;
|
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v;
|
||||||
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]', NULL]) v;
|
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]', NULL]) v;
|
||||||
SELECT avg(v) FROM unnest(ARRAY[]::vector[]) v;
|
SELECT avg(v) FROM unnest(ARRAY[]::vector[]) v;
|
||||||
|
|||||||
@@ -1,43 +0,0 @@
|
|||||||
use strict;
|
|
||||||
use warnings;
|
|
||||||
use PostgresNode;
|
|
||||||
use TestLib;
|
|
||||||
use Test::More;
|
|
||||||
|
|
||||||
my $dim = 3;
|
|
||||||
|
|
||||||
my $array_sql = join(",", ('random()') x $dim);
|
|
||||||
|
|
||||||
# Initialize node
|
|
||||||
my $node = get_new_node('node');
|
|
||||||
$node->init;
|
|
||||||
$node->start;
|
|
||||||
|
|
||||||
# Create table and index
|
|
||||||
$node->safe_psql("postgres", "CREATE EXTENSION vector;");
|
|
||||||
$node->safe_psql("postgres", "CREATE TABLE tst (i serial, v vector($dim));");
|
|
||||||
$node->safe_psql("postgres",
|
|
||||||
"INSERT INTO tst (v) SELECT ARRAY[$array_sql] FROM generate_series(1, 10000) i;"
|
|
||||||
);
|
|
||||||
$node->safe_psql("postgres", "CREATE INDEX ON tst USING ivfflat (v vector_l2_ops);");
|
|
||||||
|
|
||||||
# Delete data
|
|
||||||
$node->safe_psql("postgres", "DELETE FROM tst WHERE i % 100 != 0;");
|
|
||||||
|
|
||||||
my $exp = $node->safe_psql("postgres", qq(
|
|
||||||
SET enable_indexscan = off;
|
|
||||||
SELECT i FROM tst ORDER BY v <-> '[0,0,0]';
|
|
||||||
));
|
|
||||||
|
|
||||||
# Run twice to make sure correct tuples marked as dead
|
|
||||||
for (1 .. 2)
|
|
||||||
{
|
|
||||||
my $res = $node->safe_psql("postgres", qq(
|
|
||||||
SET enable_seqscan = off;
|
|
||||||
SET ivfflat.probes = 100;
|
|
||||||
SELECT i FROM tst ORDER BY v <-> '[0,0,0]';
|
|
||||||
));
|
|
||||||
is($res, $exp);
|
|
||||||
}
|
|
||||||
|
|
||||||
done_testing();
|
|
||||||
@@ -1,4 +1,4 @@
|
|||||||
comment = 'vector data type and ivfflat and hnsw access methods'
|
comment = 'vector data type and ivfflat access method'
|
||||||
default_version = '0.5.0'
|
default_version = '0.5.0'
|
||||||
module_pathname = '$libdir/vector'
|
module_pathname = '$libdir/vector'
|
||||||
relocatable = true
|
relocatable = true
|
||||||
|
|||||||
Reference in New Issue
Block a user