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2 Commits

Author SHA1 Message Date
Andrew Kane
27db2b7145 Align values [skip ci] 2024-03-30 23:52:33 -07:00
Andrew Kane
bb6d3f81f3 Added sparsevec type 2024-03-30 22:48:25 -07:00
38 changed files with 1422 additions and 749 deletions

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@@ -40,21 +40,13 @@ jobs:
sudo apt-get install libipc-run-perl sudo apt-get install libipc-run-perl
- run: make prove_installcheck - run: make prove_installcheck
mac: mac:
runs-on: ${{ matrix.os }} runs-on: macos-latest
if: ${{ !startsWith(github.ref_name, 'windows') }} if: ${{ !startsWith(github.ref_name, 'windows') }}
strategy:
fail-fast: false
matrix:
include:
- postgres: 16
os: macos-14
- postgres: 14
os: macos-12
steps: steps:
- uses: actions/checkout@v4 - uses: actions/checkout@v4
- uses: ankane/setup-postgres@v1 - uses: ankane/setup-postgres@v1
with: with:
postgres-version: ${{ matrix.postgres }} postgres-version: 14
- run: make - run: make
env: env:
PG_CFLAGS: -DUSE_ASSERT_CHECKING -Wall -Wextra -Werror -Wno-unused-parameter PG_CFLAGS: -DUSE_ASSERT_CHECKING -Wall -Wextra -Werror -Wno-unused-parameter
@@ -62,19 +54,13 @@ jobs:
- run: make installcheck - run: make installcheck
- if: ${{ failure() }} - if: ${{ failure() }}
run: cat regression.diffs run: cat regression.diffs
# Homebrew Postgres does not enable TAP tests, so need to download
- run: | - run: |
brew install cpanm brew install cpanm
cpanm --notest IPC::Run cpanm --notest IPC::Run
wget -q https://github.com/postgres/postgres/archive/refs/tags/$TAG.tar.gz wget -q https://github.com/postgres/postgres/archive/refs/tags/REL_14_10.tar.gz
tar xf $TAG.tar.gz tar xf REL_14_10.tar.gz
mv postgres-$TAG postgres - run: make prove_installcheck PROVE_FLAGS="-I ./postgres-REL_14_10/src/test/perl" PERL5LIB="/Users/runner/perl5/lib/perl5"
env: - run: make clean && /usr/local/opt/llvm@15/bin/scan-build --status-bugs make
TAG: ${{ matrix.postgres == 16 && 'REL_16_2' || 'REL_14_11' }}
- run: make prove_installcheck PROVE_FLAGS="-I ./postgres/src/test/perl -I ./test/perl"
env:
PERL5LIB: /Users/runner/perl5/lib/perl5
- run: make clean && $(brew --prefix llvm@15)/bin/scan-build --status-bugs make
env: env:
PG_CFLAGS: -DUSE_ASSERT_CHECKING PG_CFLAGS: -DUSE_ASSERT_CHECKING
windows: windows:

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@@ -1,12 +1,6 @@
## 0.7.0 (unreleased) ## 0.7.0 (unreleased)
- Added support for bit vectors to HNSW - Added `sparsevec` type
- Added `hamming_distance` function
- Added `jaccard_distance` function
- Added `quantize_binary` function
- Added `subvector` function
- Added concatenate operator for vectors
- Updated comparison operators to support vectors with different dimensions
## 0.6.2 (2024-03-18) ## 0.6.2 (2024-03-18)

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@@ -3,8 +3,8 @@ EXTVERSION = 0.6.2
MODULE_big = vector MODULE_big = vector
DATA = $(wildcard sql/*--*.sql) DATA = $(wildcard sql/*--*.sql)
OBJS = src/bitvector.o src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/vector.o OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/sparsevec.o src/vector.o
HEADERS = src/vector.h HEADERS = src/sparsevec.h src/vector.h
TESTS = $(wildcard test/sql/*.sql) TESTS = $(wildcard test/sql/*.sql)
REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS)) REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS))
@@ -12,7 +12,7 @@ REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)
OPTFLAGS = -march=native OPTFLAGS = -march=native
# Mac ARM doesn't always support -march=native # Mac ARM doesn't support -march=native
ifeq ($(shell uname -s), Darwin) ifeq ($(shell uname -s), Darwin)
ifeq ($(shell uname -p), arm) ifeq ($(shell uname -p), arm)
# no difference with -march=armv8.5-a # no difference with -march=armv8.5-a

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@@ -1,10 +1,10 @@
EXTENSION = vector EXTENSION = vector
EXTVERSION = 0.6.2 EXTVERSION = 0.6.2
OBJS = src\bitvector.obj src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\vector.obj OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\sparsevec.obj src\vector.obj
HEADERS = src\vector.h HEADERS = src\sparsevec.h src\vector.h
REGRESS = bit_functions btree cast copy hnsw_cosine hnsw_hamming hnsw_ip hnsw_jaccard hnsw_l2 hnsw_options hnsw_unlogged ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged vector_functions vector_input REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged
REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION) REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)
# For /arch flags # For /arch flags

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@@ -221,19 +221,7 @@ Cosine distance
CREATE INDEX ON items USING hnsw (embedding vector_cosine_ops); CREATE INDEX ON items USING hnsw (embedding vector_cosine_ops);
``` ```
Hamming distance - unreleased Vectors with up to 2,000 dimensions can be indexed.
```sql
CREATE INDEX ON items USING hnsw (embedding bit_hamming_ops);
```
Jaccard distance - unreleased
```sql
CREATE INDEX ON items USING hnsw (embedding bit_jaccard_ops);
```
Vectors with up to 2,000 dimensions can be indexed, or bit vectors with up to 64,000 dimensions.
### Index Options ### Index Options
@@ -535,6 +523,26 @@ Scale vertically by increasing memory, CPU, and storage on a single instance. Us
Scale horizontally with [replicas](https://www.postgresql.org/docs/current/hot-standby.html), or use [Citus](https://github.com/citusdata/citus) or another approach for sharding ([example](https://github.com/pgvector/pgvector-python/blob/master/examples/citus.py)). Scale horizontally with [replicas](https://www.postgresql.org/docs/current/hot-standby.html), or use [Citus](https://github.com/citusdata/citus) or another approach for sharding ([example](https://github.com/pgvector/pgvector-python/blob/master/examples/citus.py)).
## Sparse Vectors
Create a sparse vector column with 10 dimensions
```sql
CREATE TABLE items (id bigserial PRIMARY KEY, embedding sparsevec(10));
```
Insert vectors
```sql
INSERT INTO items (embedding) VALUES ('{0:1,1:2,2:3}/10'), ('{0:4,1:5,2:6}/10');
```
Get the nearest neighbors by L2 distance
```sql
SELECT * FROM items ORDER BY embedding <-> '{0:3,1:1,2:2}/10' LIMIT 5;
```
## Languages ## Languages
Use pgvector from any language with a Postgres client. You can even generate and store vectors in one language and query them in another. Use pgvector from any language with a Postgres client. You can even generate and store vectors in one language and query them in another.
@@ -711,9 +719,6 @@ Also, note that `NULL` vectors are not indexed (as well as zero vectors for cosi
## Reference ## Reference
- [Vector](#vector-type)
- [Bit](#bit-type)
### Vector Type ### Vector Type
Each vector takes `4 * dimensions + 8` bytes of storage. Each element is a single-precision floating-point number (like the `real` type in Postgres), and all elements must be finite (no `NaN`, `Infinity` or `-Infinity`). Vectors can have up to 16,000 dimensions. Each vector takes `4 * dimensions + 8` bytes of storage. Each element is a single-precision floating-point number (like the `real` type in Postgres), and all elements must be finite (no `NaN`, `Infinity` or `-Infinity`). Vectors can have up to 16,000 dimensions.
@@ -725,7 +730,6 @@ Operator | Description | Added
\+ | element-wise addition | \+ | element-wise addition |
\- | element-wise subtraction | \- | element-wise subtraction |
\* | element-wise multiplication | 0.5.0 \* | element-wise multiplication | 0.5.0
\|\| | concatenate | unreleased
<-> | Euclidean distance | <-> | Euclidean distance |
<#> | negative inner product | <#> | negative inner product |
<=> | cosine distance | <=> | cosine distance |
@@ -738,8 +742,6 @@ cosine_distance(vector, vector) → double precision | cosine distance |
inner_product(vector, vector) → double precision | inner product | inner_product(vector, vector) → double precision | inner product |
l2_distance(vector, vector) → double precision | Euclidean distance | l2_distance(vector, vector) → double precision | Euclidean distance |
l1_distance(vector, vector) → double precision | taxicab distance | 0.5.0 l1_distance(vector, vector) → double precision | taxicab distance | 0.5.0
quantize_binary(vector) → bit | quantize | unreleased
subvector(vector, integer, integer) → vector | subvector | unreleased
vector_dims(vector) → integer | number of dimensions | vector_dims(vector) → integer | number of dimensions |
vector_norm(vector) → double precision | Euclidean norm | vector_norm(vector) → double precision | Euclidean norm |
@@ -750,24 +752,6 @@ Function | Description | Added
avg(vector) → vector | average | avg(vector) → vector | average |
sum(vector) → vector | sum | 0.5.0 sum(vector) → vector | sum | 0.5.0
### Bit Type
Each bit vector takes `dimensions / 8 + (5 or 8)` bytes of storage. See the [Postgres docs](https://www.postgresql.org/docs/current/datatype-bit.html) for more info.
### Bit Operators
Operator | Description | Added
--- | --- | ---
<~> | Hamming distance | unreleased
<%> | Jaccard distance | unreleased
### Bit Functions
Function | Description | Added
--- | --- | ---
hamming_distance(bit, bit) → double precision | Hamming distance | unreleased
jaccard_distance(bit, bit) → double precision | Jaccard distance | unreleased
## Installation Notes - Linux and Mac ## Installation Notes - Linux and Mac
### Postgres Location ### Postgres Location

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@@ -1,41 +1,95 @@
-- complain if script is sourced in psql, rather than via CREATE EXTENSION -- complain if script is sourced in psql, rather than via CREATE EXTENSION
\echo Use "ALTER EXTENSION vector UPDATE TO '0.7.0'" to load this file. \quit \echo Use "ALTER EXTENSION vector UPDATE TO '0.7.0'" to load this file. \quit
CREATE FUNCTION quantize_binary(vector) RETURNS bit CREATE TYPE sparsevec;
CREATE FUNCTION sparsevec_in(cstring, oid, integer) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION subvector(vector, int, int) RETURNS vector CREATE FUNCTION sparsevec_out(sparsevec) RETURNS cstring
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION vector_concat(vector, vector) RETURNS vector CREATE FUNCTION sparsevec_typmod_in(cstring[]) RETURNS integer
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE OPERATOR || ( CREATE FUNCTION sparsevec_recv(internal, oid, integer) RETURNS sparsevec
LEFTARG = vector, RIGHTARG = vector, PROCEDURE = vector_concat AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_send(sparsevec) RETURNS bytea
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE TYPE sparsevec (
INPUT = sparsevec_in,
OUTPUT = sparsevec_out,
TYPMOD_IN = sparsevec_typmod_in,
RECEIVE = sparsevec_recv,
SEND = sparsevec_send,
STORAGE = external
); );
CREATE FUNCTION hamming_distance(bit, bit) RETURNS float8 CREATE FUNCTION l2_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION inner_product(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION cosine_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_norm(sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION jaccard_distance(bit, bit) RETURNS float8 CREATE FUNCTION sparsevec_l2_squared_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE OPERATOR <~> ( CREATE FUNCTION sparsevec_negative_inner_product(sparsevec, sparsevec) RETURNS float8
LEFTARG = bit, RIGHTARG = bit, PROCEDURE = hamming_distance, AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
COMMUTATOR = '<~>'
CREATE FUNCTION sparsevec(sparsevec, integer, boolean) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION vector_to_sparsevec(vector, integer, boolean) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_to_vector(sparsevec, integer, boolean) RETURNS vector
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE CAST (sparsevec AS sparsevec)
WITH FUNCTION sparsevec(sparsevec, integer, boolean) AS IMPLICIT;
CREATE CAST (sparsevec AS vector)
WITH FUNCTION sparsevec_to_vector(sparsevec, integer, boolean) AS IMPLICIT;
CREATE CAST (vector AS sparsevec)
WITH FUNCTION vector_to_sparsevec(vector, integer, boolean) AS IMPLICIT;
CREATE OPERATOR <-> (
LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = l2_distance,
COMMUTATOR = '<->'
); );
CREATE OPERATOR <%> ( CREATE OPERATOR <#> (
LEFTARG = bit, RIGHTARG = bit, PROCEDURE = jaccard_distance, LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = sparsevec_negative_inner_product,
COMMUTATOR = '<%>' COMMUTATOR = '<#>'
); );
CREATE OPERATOR CLASS bit_hamming_ops CREATE OPERATOR <=> (
FOR TYPE bit USING hnsw AS LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = cosine_distance,
OPERATOR 1 <~> (bit, bit) FOR ORDER BY float_ops, COMMUTATOR = '<=>'
FUNCTION 1 hamming_distance(bit, bit); );
CREATE OPERATOR CLASS bit_jaccard_ops CREATE OPERATOR CLASS sparsevec_l2_ops
FOR TYPE bit USING hnsw AS FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <%> (bit, bit) FOR ORDER BY float_ops, OPERATOR 1 <-> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 jaccard_distance(bit, bit); FUNCTION 1 sparsevec_l2_squared_distance(sparsevec, sparsevec);
CREATE OPERATOR CLASS sparsevec_ip_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <#> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_negative_inner_product(sparsevec, sparsevec);
CREATE OPERATOR CLASS sparsevec_cosine_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <=> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_negative_inner_product(sparsevec, sparsevec),
FUNCTION 2 sparsevec_norm(sparsevec);

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@@ -58,12 +58,6 @@ CREATE FUNCTION vector_sub(vector, vector) RETURNS vector
CREATE FUNCTION vector_mul(vector, vector) RETURNS vector CREATE FUNCTION vector_mul(vector, vector) RETURNS vector
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION quantize_binary(vector) RETURNS bit
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION subvector(vector, int, int) RETURNS vector
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- vector private functions -- vector private functions
CREATE FUNCTION vector_lt(vector, vector) RETURNS bool CREATE FUNCTION vector_lt(vector, vector) RETURNS bool
@@ -105,9 +99,6 @@ CREATE FUNCTION vector_avg(double precision[]) RETURNS vector
CREATE FUNCTION vector_combine(double precision[], double precision[]) RETURNS double precision[] CREATE FUNCTION vector_combine(double precision[], double precision[]) RETURNS double precision[]
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION vector_concat(vector, vector) RETURNS vector
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- vector aggregates -- vector aggregates
CREATE AGGREGATE avg(vector) ( CREATE AGGREGATE avg(vector) (
@@ -197,10 +188,6 @@ CREATE OPERATOR * (
COMMUTATOR = * COMMUTATOR = *
); );
CREATE OPERATOR || (
LEFTARG = vector, RIGHTARG = vector, PROCEDURE = vector_concat
);
CREATE OPERATOR < ( CREATE OPERATOR < (
LEFTARG = vector, RIGHTARG = vector, PROCEDURE = vector_lt, LEFTARG = vector, RIGHTARG = vector, PROCEDURE = vector_lt,
COMMUTATOR = > , NEGATOR = >= , COMMUTATOR = > , NEGATOR = >= ,
@@ -301,30 +288,109 @@ CREATE OPERATOR CLASS vector_cosine_ops
FUNCTION 1 vector_negative_inner_product(vector, vector), FUNCTION 1 vector_negative_inner_product(vector, vector),
FUNCTION 2 vector_norm(vector); FUNCTION 2 vector_norm(vector);
-- bit functions --- sparsevec type
CREATE FUNCTION hamming_distance(bit, bit) RETURNS float8 CREATE TYPE sparsevec;
CREATE FUNCTION sparsevec_in(cstring, oid, integer) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION jaccard_distance(bit, bit) RETURNS float8 CREATE FUNCTION sparsevec_out(sparsevec) RETURNS cstring
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE OPERATOR <~> ( CREATE FUNCTION sparsevec_typmod_in(cstring[]) RETURNS integer
LEFTARG = bit, RIGHTARG = bit, PROCEDURE = hamming_distance, AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
COMMUTATOR = '<~>'
CREATE FUNCTION sparsevec_recv(internal, oid, integer) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_send(sparsevec) RETURNS bytea
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE TYPE sparsevec (
INPUT = sparsevec_in,
OUTPUT = sparsevec_out,
TYPMOD_IN = sparsevec_typmod_in,
RECEIVE = sparsevec_recv,
SEND = sparsevec_send,
STORAGE = external
); );
CREATE OPERATOR <%> ( -- sparsevec functions
LEFTARG = bit, RIGHTARG = bit, PROCEDURE = jaccard_distance,
COMMUTATOR = '<%>' CREATE FUNCTION l2_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION inner_product(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION cosine_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_norm(sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- sparsevec private functions
CREATE FUNCTION sparsevec_l2_squared_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_negative_inner_product(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- sparsevec cast functions
CREATE FUNCTION sparsevec(sparsevec, integer, boolean) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION vector_to_sparsevec(vector, integer, boolean) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_to_vector(sparsevec, integer, boolean) RETURNS vector
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- sparsevec casts
CREATE CAST (sparsevec AS sparsevec)
WITH FUNCTION sparsevec(sparsevec, integer, boolean) AS IMPLICIT;
CREATE CAST (sparsevec AS vector)
WITH FUNCTION sparsevec_to_vector(sparsevec, integer, boolean) AS IMPLICIT;
CREATE CAST (vector AS sparsevec)
WITH FUNCTION vector_to_sparsevec(vector, integer, boolean) AS IMPLICIT;
-- sparsevec operators
CREATE OPERATOR <-> (
LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = l2_distance,
COMMUTATOR = '<->'
); );
CREATE OPERATOR CLASS bit_hamming_ops CREATE OPERATOR <#> (
FOR TYPE bit USING hnsw AS LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = sparsevec_negative_inner_product,
OPERATOR 1 <~> (bit, bit) FOR ORDER BY float_ops, COMMUTATOR = '<#>'
FUNCTION 1 hamming_distance(bit, bit); );
CREATE OPERATOR CLASS bit_jaccard_ops CREATE OPERATOR <=> (
FOR TYPE bit USING hnsw AS LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = cosine_distance,
OPERATOR 1 <%> (bit, bit) FOR ORDER BY float_ops, COMMUTATOR = '<=>'
FUNCTION 1 jaccard_distance(bit, bit); );
-- sparsevec opclasses
CREATE OPERATOR CLASS sparsevec_l2_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <-> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_l2_squared_distance(sparsevec, sparsevec);
CREATE OPERATOR CLASS sparsevec_ip_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <#> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_negative_inner_product(sparsevec, sparsevec);
CREATE OPERATOR CLASS sparsevec_cosine_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <=> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_negative_inner_product(sparsevec, sparsevec),
FUNCTION 2 sparsevec_norm(sparsevec);

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@@ -1,90 +0,0 @@
#include "postgres.h"
#include "bitvector.h"
#include "port/pg_bitutils.h"
#include "utils/varbit.h"
#if PG_VERSION_NUM >= 160000
#include "varatt.h"
#endif
/*
* Allocate and initialize a new bit vector
*/
VarBit *
InitBitVector(int dim)
{
VarBit *result;
int size;
size = VARBITTOTALLEN(dim);
result = (VarBit *) palloc0(size);
SET_VARSIZE(result, size);
VARBITLEN(result) = dim;
return result;
}
/*
* Ensure same dimensions
*/
static inline void
CheckDims(VarBit *a, VarBit *b)
{
if (VARBITLEN(a) != VARBITLEN(b))
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("different bit lengths %u and %u", VARBITLEN(a), VARBITLEN(b))));
}
/*
* Get the Hamming distance between two bit vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(hamming_distance);
Datum
hamming_distance(PG_FUNCTION_ARGS)
{
VarBit *a = PG_GETARG_VARBIT_P(0);
VarBit *b = PG_GETARG_VARBIT_P(1);
unsigned char *ax = VARBITS(a);
unsigned char *bx = VARBITS(b);
uint64 distance = 0;
CheckDims(a, b);
/* TODO Improve performance */
for (uint32 i = 0; i < VARBITBYTES(a); i++)
distance += pg_number_of_ones[ax[i] ^ bx[i]];
PG_RETURN_FLOAT8((double) distance);
}
/*
* Get the Jaccard distance between two bit vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(jaccard_distance);
Datum
jaccard_distance(PG_FUNCTION_ARGS)
{
VarBit *a = PG_GETARG_VARBIT_P(0);
VarBit *b = PG_GETARG_VARBIT_P(1);
unsigned char *ax = VARBITS(a);
unsigned char *bx = VARBITS(b);
uint64 ab = 0;
uint64 aa;
uint64 bb;
CheckDims(a, b);
/* TODO Improve performance */
for (uint32 i = 0; i < VARBITBYTES(a); i++)
ab += pg_number_of_ones[ax[i] & bx[i]];
if (ab == 0)
PG_RETURN_FLOAT8(1);
aa = pg_popcount((char *) ax, VARBITBYTES(a));
bb = pg_popcount((char *) bx, VARBITBYTES(b));
PG_RETURN_FLOAT8(1 - (ab / ((double) (aa + bb - ab))));
}

View File

@@ -1,8 +0,0 @@
#ifndef BITVECTOR_H
#define BITVECTOR_H
#include "utils/varbit.h"
VarBit *InitBitVector(int dim);
#endif

View File

@@ -17,6 +17,7 @@
#endif #endif
#define HNSW_MAX_DIM 2000 #define HNSW_MAX_DIM 2000
#define HNSW_MAX_NNZ 1000
/* Support functions */ /* Support functions */
#define HNSW_DISTANCE_PROC 1 #define HNSW_DISTANCE_PROC 1
@@ -58,7 +59,7 @@
typedef enum HnswType typedef enum HnswType
{ {
HNSW_TYPE_VECTOR, HNSW_TYPE_VECTOR,
HNSW_TYPE_BIT HNSW_TYPE_SPARSEVEC
} HnswType; } HnswType;
/* Build phases */ /* Build phases */
@@ -375,6 +376,7 @@ int HnswGetEfConstruction(Relation index);
FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum); FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum);
HnswType HnswGetType(Relation index); HnswType HnswGetType(Relation index);
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, HnswType type); bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, HnswType type);
void HnswCheckValue(Datum value, HnswType type);
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum); Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
void HnswInitPage(Buffer buf, Page page); void HnswInitPage(Buffer buf, Page page);
void HnswInit(void); void HnswInit(void);

View File

@@ -44,7 +44,6 @@
#include "access/xact.h" #include "access/xact.h"
#include "access/xloginsert.h" #include "access/xloginsert.h"
#include "catalog/index.h" #include "catalog/index.h"
#include "catalog/pg_type_d.h"
#include "commands/progress.h" #include "commands/progress.h"
#include "hnsw.h" #include "hnsw.h"
#include "miscadmin.h" #include "miscadmin.h"
@@ -487,6 +486,9 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heaptid, Hn
/* Detoast once for all calls */ /* Detoast once for all calls */
Datum value = PointerGetDatum(PG_DETOAST_DATUM(values[0])); Datum value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
/* Check value */
HnswCheckValue(value, buildstate->type);
/* Normalize if needed */ /* Normalize if needed */
if (buildstate->normprocinfo != NULL) if (buildstate->normprocinfo != NULL)
{ {
@@ -666,27 +668,13 @@ HnswSharedMemoryAlloc(Size size, void *state)
return chunk; return chunk;
} }
/*
* Get max dimensions
*/
static int
GetMaxDimensions(HnswType type)
{
int maxDimensions = HNSW_MAX_DIM;
if (type == HNSW_TYPE_BIT)
maxDimensions *= 32;
return maxDimensions;
}
/* /*
* Initialize the build state * Initialize the build state
*/ */
static void static void
InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, IndexInfo *indexInfo, ForkNumber forkNum) InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, IndexInfo *indexInfo, ForkNumber forkNum)
{ {
int maxDimensions; int maxDimensions = HNSW_MAX_DIM;
buildstate->heap = heap; buildstate->heap = heap;
buildstate->index = index; buildstate->index = index;
@@ -698,7 +686,9 @@ InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, Index
buildstate->efConstruction = HnswGetEfConstruction(index); buildstate->efConstruction = HnswGetEfConstruction(index);
buildstate->dimensions = TupleDescAttr(index->rd_att, 0)->atttypmod; buildstate->dimensions = TupleDescAttr(index->rd_att, 0)->atttypmod;
maxDimensions = GetMaxDimensions(buildstate->type); /* No limit on sparse vector dimensions */
if (buildstate->type == HNSW_TYPE_SPARSEVEC)
maxDimensions = INT_MAX;
/* Require column to have dimensions to be indexed */ /* Require column to have dimensions to be indexed */
if (buildstate->dimensions < 0) if (buildstate->dimensions < 0)

View File

@@ -614,15 +614,19 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
Datum value; Datum value;
FmgrInfo *normprocinfo; FmgrInfo *normprocinfo;
Oid collation = index->rd_indcollation[0]; Oid collation = index->rd_indcollation[0];
HnswType type = HnswGetType(index);
/* Detoast once for all calls */ /* Detoast once for all calls */
value = PointerGetDatum(PG_DETOAST_DATUM(values[0])); value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
/* Check value */
HnswCheckValue(value, type);
/* Normalize if needed */ /* Normalize if needed */
normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC); normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC);
if (normprocinfo != NULL) if (normprocinfo != NULL)
{ {
if (!HnswNormValue(normprocinfo, collation, &value, HnswGetType(index))) if (!HnswNormValue(normprocinfo, collation, &value, type))
return; return;
} }

View File

@@ -1,8 +1,6 @@
#include "postgres.h" #include "postgres.h"
#include "access/relscan.h" #include "access/relscan.h"
#include "bitvector.h"
#include "catalog/pg_type_d.h"
#include "hnsw.h" #include "hnsw.h"
#include "pgstat.h" #include "pgstat.h"
#include "storage/bufmgr.h" #include "storage/bufmgr.h"

View File

@@ -3,13 +3,15 @@
#include <math.h> #include <math.h>
#include "access/generic_xlog.h" #include "access/generic_xlog.h"
#include "catalog/pg_type_d.h" #include "catalog/pg_type.h"
#include "hnsw.h" #include "hnsw.h"
#include "lib/pairingheap.h" #include "lib/pairingheap.h"
#include "sparsevec.h"
#include "storage/bufmgr.h" #include "storage/bufmgr.h"
#include "utils/datum.h" #include "utils/datum.h"
#include "utils/memdebug.h" #include "utils/memdebug.h"
#include "utils/rel.h" #include "utils/rel.h"
#include "utils/syscache.h"
#include "vector.h" #include "vector.h"
#if PG_VERSION_NUM >= 130000 #if PG_VERSION_NUM >= 130000
@@ -151,17 +153,29 @@ HnswOptionalProcInfo(Relation index, uint16 procnum)
} }
/* /*
* Get type * Get vector type
*/ */
HnswType HnswType
HnswGetType(Relation index) HnswGetType(Relation index)
{ {
Oid typid = TupleDescAttr(index->rd_att, 0)->atttypid; Oid typeOid = TupleDescAttr(index->rd_att, 0)->atttypid;
HeapTuple tuple;
Form_pg_type type;
int result;
if (typid == BITOID || typid == VARBITOID) tuple = SearchSysCache1(TYPEOID, ObjectIdGetDatum(typeOid));
return HNSW_TYPE_BIT; if (!HeapTupleIsValid(tuple))
elog(ERROR, "cache lookup failed for type %u", typeOid);
return HNSW_TYPE_VECTOR; type = (Form_pg_type) GETSTRUCT(tuple);
if (strcmp(NameStr(type->typname), "sparsevec") == 0)
result = HNSW_TYPE_SPARSEVEC;
else
result = HNSW_TYPE_VECTOR;
ReleaseSysCache(tuple);
return result;
} }
/* /*
@@ -190,6 +204,21 @@ HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, HnswType type)
*value = PointerGetDatum(result); *value = PointerGetDatum(result);
} }
else if (type == HNSW_TYPE_SPARSEVEC)
{
SparseVector *v = DatumGetSparseVector(*value);
SparseVector *result = InitSparseVector(v->dim, v->nnz);
float *vx = SPARSEVEC_VALUES(v);
float *rx = SPARSEVEC_VALUES(result);
for (int i = 0; i < v->nnz; i++)
{
result->indices[i] = v->indices[i];
rx[i] = vx[i] / norm;
}
*value = PointerGetDatum(result);
}
else else
elog(ERROR, "Unsupported type"); elog(ERROR, "Unsupported type");
@@ -199,6 +228,21 @@ HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, HnswType type)
return false; return false;
} }
/*
* Check if a value can be indexed
*/
void
HnswCheckValue(Datum value, HnswType type)
{
if (type == HNSW_TYPE_SPARSEVEC)
{
SparseVector *vec = DatumGetSparseVector(value);
if (vec->nnz > HNSW_MAX_NNZ)
elog(ERROR, "sparsevec cannot have more than %d non-zero elements for hnsw index", HNSW_MAX_NNZ);
}
}
/* /*
* New buffer * New buffer
*/ */

779
src/sparsevec.c Normal file
View File

@@ -0,0 +1,779 @@
#include "postgres.h"
#include <limits.h>
#include <math.h>
#include "fmgr.h"
#include "libpq/pqformat.h"
#include "sparsevec.h"
#include "utils/array.h"
#include "utils/builtins.h"
#include "vector.h"
#if PG_VERSION_NUM >= 120000
#include "common/shortest_dec.h"
#include "utils/float.h"
#else
#include <float.h>
#include "utils/builtins.h"
#endif
/*
* Ensure same dimensions
*/
static inline void
CheckDims(SparseVector * a, SparseVector * b)
{
if (a->dim != b->dim)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("different sparsevec dimensions %d and %d", a->dim, b->dim)));
}
/*
* Ensure expected dimensions
*/
static inline void
CheckExpectedDim(int32 typmod, int dim)
{
if (typmod != -1 && typmod != dim)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("expected %d dimensions, not %d", typmod, dim)));
}
/*
* Ensure valid dimensions
*/
static inline void
CheckDim(int dim)
{
if (dim < 1)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("sparsevec must have at least 1 dimension")));
if (dim > SPARSEVEC_MAX_DIM)
ereport(ERROR,
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
errmsg("sparsevec cannot have more than %d dimensions", SPARSEVEC_MAX_DIM)));
}
/*
* Ensure valid nnz
*/
static inline void
CheckNnz(int nnz, int dim)
{
if (nnz < 0)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("sparsevec must have at least one element")));
if (nnz > dim)
ereport(ERROR,
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
errmsg("sparsevec cannot have more elements than dimensions")));
}
/*
* Ensure valid index
*/
static inline void
CheckIndex(int32 *indices, int i, int dim)
{
int32 index = indices[i];
if (index < 0)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("index must not be negative")));
if (index >= dim)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("index must be less than dimensions")));
if (i > 0)
{
if (index < indices[i - 1])
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("indexes must be in ascending order")));
if (index == indices[i - 1])
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("indexes must not contain duplicates")));
}
}
/*
* Ensure finite element
*/
static inline void
CheckElement(float value)
{
if (isnan(value))
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("NaN not allowed in sparsevec")));
if (isinf(value))
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("infinite value not allowed in sparsevec")));
}
/*
* Allocate and initialize a new sparse vector
*/
SparseVector *
InitSparseVector(int dim, int nnz)
{
SparseVector *result;
int size;
size = SPARSEVEC_SIZE(nnz);
result = (SparseVector *) palloc0(size);
SET_VARSIZE(result, size);
result->dim = dim;
result->nnz = nnz;
return result;
}
/*
* Check for whitespace, since array_isspace() is static
*/
static inline bool
sparsevec_isspace(char ch)
{
if (ch == ' ' ||
ch == '\t' ||
ch == '\n' ||
ch == '\r' ||
ch == '\v' ||
ch == '\f')
return true;
return false;
}
/*
* Convert textual representation to internal representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_in);
Datum
sparsevec_in(PG_FUNCTION_ARGS)
{
char *lit = PG_GETARG_CSTRING(0);
int32 typmod = PG_GETARG_INT32(2);
int dim;
char *pt;
char *stringEnd;
SparseVector *result;
float *rvalues;
char *litcopy = pstrdup(lit);
char *str = litcopy;
int32 *indices;
float *values;
int maxNnz;
int nnz = 0;
maxNnz = 1;
pt = str;
while (*pt != '\0')
{
if (*pt == ',')
maxNnz++;
pt++;
}
indices = palloc(maxNnz * sizeof(int32));
values = palloc(maxNnz * sizeof(float));
while (sparsevec_isspace(*str))
str++;
if (*str != '{')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("malformed sparsevec literal: \"%s\"", lit),
errdetail("Vector contents must start with \"{\".")));
str++;
pt = strtok(str, ",");
stringEnd = pt;
while (pt != NULL && *stringEnd != '}')
{
long index;
float value;
/* TODO Better error */
if (nnz == maxNnz)
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("ran out of buffer: \"%s\"", lit)));
while (sparsevec_isspace(*pt))
pt++;
/* Check for empty string like float4in */
if (*pt == '\0')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
/* Use similar logic as int2vectorin */
errno = 0;
index = strtol(pt, &stringEnd, 10);
if (stringEnd == pt)
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
if (errno == ERANGE || index < 0 || index > INT_MAX)
ereport(ERROR,
(errcode(ERRCODE_NUMERIC_VALUE_OUT_OF_RANGE),
errmsg("index \"%ld\" is out of range for type sparsevec", index)));
if (stringEnd == pt)
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
while (sparsevec_isspace(*stringEnd))
stringEnd++;
if (*stringEnd != ':')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
stringEnd++;
while (sparsevec_isspace(*stringEnd))
stringEnd++;
errno = 0;
pt = stringEnd;
value = strtof(pt, &stringEnd);
if (stringEnd == pt)
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
/* Check for range error like float4in */
if (errno == ERANGE && (value == 0 || isinf(value)))
ereport(ERROR,
(errcode(ERRCODE_NUMERIC_VALUE_OUT_OF_RANGE),
errmsg("\"%s\" is out of range for type sparsevec", pt)));
/* TODO Decide whether to store zero values */
if (value != 0)
{
indices[nnz] = index;
values[nnz] = value;
nnz++;
}
if (*stringEnd != '\0' && *stringEnd != '}')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
pt = strtok(NULL, ",");
}
if (stringEnd == NULL || *stringEnd != '}')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("malformed sparsevec literal: \"%s\"", lit),
errdetail("Unexpected end of input.")));
stringEnd++;
if (*stringEnd != '/')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("malformed sparsevec literal: \"%s\"", lit),
errdetail("Unexpected end of input.")));
stringEnd++;
/* Use similar logic as int2vectorin */
errno = 0;
pt = stringEnd;
dim = strtol(pt, &stringEnd, 10);
if (stringEnd == pt)
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
/* Only whitespace is allowed after the closing brace */
while (sparsevec_isspace(*stringEnd))
stringEnd++;
if (*stringEnd != '\0')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("malformed sparsevec literal: \"%s\"", lit),
errdetail("Junk after closing.")));
pfree(litcopy);
CheckDim(dim);
CheckExpectedDim(typmod, dim);
result = InitSparseVector(dim, nnz);
rvalues = SPARSEVEC_VALUES(result);
for (int i = 0; i < nnz; i++)
{
result->indices[i] = indices[i];
rvalues[i] = values[i];
CheckIndex(result->indices, i, dim);
CheckElement(rvalues[i]);
}
PG_RETURN_POINTER(result);
}
#define AppendChar(ptr, c) (*(ptr)++ = (c))
#define AppendFloat(ptr, f) ((ptr) += float_to_shortest_decimal_bufn((f), (ptr)))
#if PG_VERSION_NUM >= 140000
#define AppendInt(ptr, i) ((ptr) += pg_ltoa((i), (ptr)))
#else
#define AppendInt(ptr, i) \
do { \
pg_ltoa(i, ptr); \
while (*ptr != '\0') \
ptr++; \
} while (0)
#endif
/*
* Convert internal representation to textual representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_out);
Datum
sparsevec_out(PG_FUNCTION_ARGS)
{
SparseVector *sparsevec = PG_GETARG_SPARSEVEC_P(0);
float *values = SPARSEVEC_VALUES(sparsevec);
char *buf;
char *ptr;
/*
* Need:
*
* nnz * 10 bytes for index (positive integer)
*
* nnz bytes for :
*
* nnz * (FLOAT_SHORTEST_DECIMAL_LEN - 1) bytes for
* float_to_shortest_decimal_bufn
*
* nnz - 1 bytes for ,
*
* 10 bytes for dimensions
*
* 4 bytes for {, }, /, and \0
*/
buf = (char *) palloc((11 + FLOAT_SHORTEST_DECIMAL_LEN) * sparsevec->nnz + 13);
ptr = buf;
AppendChar(ptr, '{');
for (int i = 0; i < sparsevec->nnz; i++)
{
if (i > 0)
AppendChar(ptr, ',');
AppendInt(ptr, sparsevec->indices[i]);
AppendChar(ptr, ':');
AppendFloat(ptr, values[i]);
}
AppendChar(ptr, '}');
AppendChar(ptr, '/');
AppendInt(ptr, sparsevec->dim);
*ptr = '\0';
PG_FREE_IF_COPY(sparsevec, 0);
PG_RETURN_CSTRING(buf);
}
/*
* Convert type modifier
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_typmod_in);
Datum
sparsevec_typmod_in(PG_FUNCTION_ARGS)
{
ArrayType *ta = PG_GETARG_ARRAYTYPE_P(0);
int32 *tl;
int n;
tl = ArrayGetIntegerTypmods(ta, &n);
if (n != 1)
ereport(ERROR,
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
errmsg("invalid type modifier")));
if (*tl < 1)
ereport(ERROR,
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
errmsg("dimensions for type sparsevec must be at least 1")));
if (*tl > SPARSEVEC_MAX_DIM)
ereport(ERROR,
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
errmsg("dimensions for type sparsevec cannot exceed %d", SPARSEVEC_MAX_DIM)));
PG_RETURN_INT32(*tl);
}
/*
* Convert external binary representation to internal representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_recv);
Datum
sparsevec_recv(PG_FUNCTION_ARGS)
{
StringInfo buf = (StringInfo) PG_GETARG_POINTER(0);
int32 typmod = PG_GETARG_INT32(2);
SparseVector *result;
int32 dim;
int32 nnz;
int32 unused;
float *values;
dim = pq_getmsgint(buf, sizeof(int32));
nnz = pq_getmsgint(buf, sizeof(int32));
unused = pq_getmsgint(buf, sizeof(int32));
CheckDim(dim);
CheckNnz(nnz, dim);
CheckExpectedDim(typmod, dim);
if (unused != 0)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("expected unused to be 0, not %d", unused)));
result = InitSparseVector(dim, nnz);
values = SPARSEVEC_VALUES(result);
for (int i = 0; i < nnz; i++)
{
result->indices[i] = pq_getmsgint(buf, sizeof(int32));
CheckIndex(result->indices, i, dim);
}
for (int i = 0; i < nnz; i++)
{
values[i] = pq_getmsgfloat4(buf);
CheckElement(values[i]);
}
PG_RETURN_POINTER(result);
}
/*
* Convert internal representation to the external binary representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_send);
Datum
sparsevec_send(PG_FUNCTION_ARGS)
{
SparseVector *svec = PG_GETARG_SPARSEVEC_P(0);
float *values = SPARSEVEC_VALUES(svec);
StringInfoData buf;
pq_begintypsend(&buf);
pq_sendint(&buf, svec->dim, sizeof(int32));
pq_sendint(&buf, svec->nnz, sizeof(int32));
pq_sendint(&buf, svec->unused, sizeof(int32));
for (int i = 0; i < svec->nnz; i++)
pq_sendint(&buf, svec->indices[i], sizeof(int32));
for (int i = 0; i < svec->nnz; i++)
pq_sendfloat4(&buf, values[i]);
PG_RETURN_BYTEA_P(pq_endtypsend(&buf));
}
/*
* Convert sparse vector to sparse vector
* This is needed to check the type modifier
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec);
Datum
sparsevec(PG_FUNCTION_ARGS)
{
SparseVector *svec = PG_GETARG_SPARSEVEC_P(0);
int32 typmod = PG_GETARG_INT32(1);
CheckExpectedDim(typmod, svec->dim);
PG_RETURN_POINTER(svec);
}
/*
* Convert dense vector to sparse vector
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_to_sparsevec);
Datum
vector_to_sparsevec(PG_FUNCTION_ARGS)
{
Vector *vec = PG_GETARG_VECTOR_P(0);
int32 typmod = PG_GETARG_INT32(1);
SparseVector *result;
int dim = vec->dim;
int nnz = 0;
float *values;
int j = 0;
CheckDim(dim);
CheckExpectedDim(typmod, dim);
for (int i = 0; i < dim; i++)
{
if (vec->x[i] != 0)
nnz++;
}
result = InitSparseVector(dim, nnz);
values = SPARSEVEC_VALUES(result);
for (int i = 0; i < dim; i++)
{
if (vec->x[i] != 0)
{
/* Safety check */
if (j == nnz)
elog(ERROR, "safety check failed");
result->indices[j] = i;
values[j] = vec->x[i];
j++;
}
}
PG_RETURN_POINTER(result);
}
/*
* Get the L2 squared distance between sparse vectors
*/
static double
l2_distance_squared_internal(SparseVector * a, SparseVector * b)
{
float *ax = SPARSEVEC_VALUES(a);
float *bx = SPARSEVEC_VALUES(b);
double distance = 0.0;
int bpos = 0;
for (int i = 0; i < a->nnz; i++)
{
int ai = a->indices[i];
int bi = -1;
for (int j = bpos; j < b->nnz; j++)
{
bi = b->indices[j];
if (ai == bi)
{
double diff = ax[i] - bx[j];
distance += diff * diff;
}
else if (ai > bi)
distance += bx[j] * bx[j];
/* Update start for next iteration */
if (ai >= bi)
bpos = j + 1;
/* Found or passed it */
if (bi >= ai)
break;
}
if (ai != bi)
distance += ax[i] * ax[i];
}
for (int j = bpos; j < b->nnz; j++)
distance += bx[j] * bx[j];
return distance;
}
/*
* Get the L2 distance between sparse vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_l2_distance);
Datum
sparsevec_l2_distance(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
SparseVector *b = PG_GETARG_SPARSEVEC_P(1);
CheckDims(a, b);
PG_RETURN_FLOAT8(sqrt(l2_distance_squared_internal(a, b)));
}
/*
* Get the L2 squared distance between sparse vectors
* This saves a sqrt calculation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_l2_squared_distance);
Datum
sparsevec_l2_squared_distance(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
SparseVector *b = PG_GETARG_SPARSEVEC_P(1);
CheckDims(a, b);
PG_RETURN_FLOAT8(l2_distance_squared_internal(a, b));
}
/*
* Get the inner product of two sparse vectors
*/
static double
inner_product_internal(SparseVector * a, SparseVector * b)
{
float *ax = SPARSEVEC_VALUES(a);
float *bx = SPARSEVEC_VALUES(b);
double distance = 0.0;
int bpos = 0;
for (int i = 0; i < a->nnz; i++)
{
int ai = a->indices[i];
for (int j = bpos; j < b->nnz; j++)
{
int bi = b->indices[j];
/* Only update when the same index */
if (ai == bi)
distance += ax[i] * bx[j];
/* Update start for next iteration */
if (ai >= bi)
bpos = j + 1;
/* Found or passed it */
if (bi >= ai)
break;
}
}
return distance;
}
/*
* Get the inner product of two sparse vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_inner_product);
Datum
sparsevec_inner_product(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
SparseVector *b = PG_GETARG_SPARSEVEC_P(1);
CheckDims(a, b);
PG_RETURN_FLOAT8(inner_product_internal(a, b));
}
/*
* Get the negative inner product of two sparse vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_negative_inner_product);
Datum
sparsevec_negative_inner_product(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
SparseVector *b = PG_GETARG_SPARSEVEC_P(1);
CheckDims(a, b);
PG_RETURN_FLOAT8(-inner_product_internal(a, b));
}
/*
* Get the cosine distance between two sparse vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_cosine_distance);
Datum
sparsevec_cosine_distance(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
SparseVector *b = PG_GETARG_SPARSEVEC_P(1);
float *ax = SPARSEVEC_VALUES(a);
float *bx = SPARSEVEC_VALUES(b);
float norma = 0.0;
float normb = 0.0;
double similarity;
CheckDims(a, b);
similarity = inner_product_internal(a, b);
/* Auto-vectorized */
for (int i = 0; i < a->nnz; i++)
norma += ax[i] * ax[i];
/* Auto-vectorized */
for (int i = 0; i < b->nnz; i++)
normb += bx[i] * bx[i];
/* Use sqrt(a * b) over sqrt(a) * sqrt(b) */
similarity /= sqrt((double) norma * (double) normb);
#ifdef _MSC_VER
/* /fp:fast may not propagate NaN */
if (isnan(similarity))
PG_RETURN_FLOAT8(NAN);
#endif
/* Keep in range */
if (similarity > 1)
similarity = 1.0;
else if (similarity < -1)
similarity = -1.0;
PG_RETURN_FLOAT8(1.0 - similarity);
}
/*
* Get the L2 norm of a sparse vector
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_norm);
Datum
sparsevec_norm(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
float *ax = SPARSEVEC_VALUES(a);
double norm = 0.0;
/* Auto-vectorized */
for (int i = 0; i < a->nnz; i++)
norm += (double) ax[i] * (double) ax[i];
PG_RETURN_FLOAT8(sqrt(norm));
}

23
src/sparsevec.h Normal file
View File

@@ -0,0 +1,23 @@
#ifndef SPARSEVEC_H
#define SPARSEVEC_H
#define SPARSEVEC_MAX_DIM 100000
#define SPARSEVEC_SIZE(_nnz) (offsetof(SparseVector, indices) + MAXALIGN((_nnz) * sizeof(int32)) + (_nnz * sizeof(float)))
#define SPARSEVEC_VALUES(x) ((float *) (((char *) (x)) + offsetof(SparseVector, indices) + MAXALIGN((x)->nnz * sizeof(int32))))
#define DatumGetSparseVector(x) ((SparseVector *) PG_DETOAST_DATUM(x))
#define PG_GETARG_SPARSEVEC_P(x) DatumGetSparseVector(PG_GETARG_DATUM(x))
#define PG_RETURN_SPARSEVEC_P(x) PG_RETURN_POINTER(x)
typedef struct SparseVector
{
int32 vl_len_; /* varlena header (do not touch directly!) */
int32 dim; /* number of dimensions */
int32 nnz;
int32 unused;
int32 indices[FLEXIBLE_ARRAY_MEMBER];
} SparseVector;
SparseVector *InitSparseVector(int dim, int nnz);
#endif

View File

@@ -2,7 +2,6 @@
#include <math.h> #include <math.h>
#include "bitvector.h"
#include "catalog/pg_type.h" #include "catalog/pg_type.h"
#include "common/shortest_dec.h" #include "common/shortest_dec.h"
#include "fmgr.h" #include "fmgr.h"
@@ -11,6 +10,7 @@
#include "lib/stringinfo.h" #include "lib/stringinfo.h"
#include "libpq/pqformat.h" #include "libpq/pqformat.h"
#include "port.h" /* for strtof() */ #include "port.h" /* for strtof() */
#include "sparsevec.h"
#include "utils/array.h" #include "utils/array.h"
#include "utils/builtins.h" #include "utils/builtins.h"
#include "utils/float.h" #include "utils/float.h"
@@ -276,9 +276,6 @@ vector_in(PG_FUNCTION_ARGS)
PG_RETURN_POINTER(result); PG_RETURN_POINTER(result);
} }
#define AppendChar(ptr, c) (*(ptr)++ = (c))
#define AppendFloat(ptr, f) ((ptr) += float_to_shortest_decimal_bufn((f), (ptr)))
/* /*
* Convert internal representation to textual representation * Convert internal representation to textual representation
*/ */
@@ -290,6 +287,7 @@ vector_out(PG_FUNCTION_ARGS)
int dim = vector->dim; int dim = vector->dim;
char *buf; char *buf;
char *ptr; char *ptr;
int n;
/* /*
* Need: * Need:
@@ -304,17 +302,21 @@ vector_out(PG_FUNCTION_ARGS)
buf = (char *) palloc(FLOAT_SHORTEST_DECIMAL_LEN * dim + 2); buf = (char *) palloc(FLOAT_SHORTEST_DECIMAL_LEN * dim + 2);
ptr = buf; ptr = buf;
AppendChar(ptr, '['); *ptr = '[';
ptr++;
for (int i = 0; i < dim; i++) for (int i = 0; i < dim; i++)
{ {
if (i > 0) if (i > 0)
AppendChar(ptr, ','); {
*ptr = ',';
ptr++;
}
AppendFloat(ptr, vector->x[i]); n = float_to_shortest_decimal_bufn(vector->x[i], ptr);
ptr += n;
} }
*ptr = ']';
AppendChar(ptr, ']'); ptr++;
*ptr = '\0'; *ptr = '\0';
PG_FREE_IF_COPY(vector, 0); PG_FREE_IF_COPY(vector, 0);
@@ -859,80 +861,6 @@ vector_mul(PG_FUNCTION_ARGS)
PG_RETURN_POINTER(result); PG_RETURN_POINTER(result);
} }
/*
* Quantize a vector
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(quantize_binary);
Datum
quantize_binary(PG_FUNCTION_ARGS)
{
Vector *a = PG_GETARG_VECTOR_P(0);
float *ax = a->x;
VarBit *result = InitBitVector(a->dim);
unsigned char *rx = VARBITS(result);
for (int i = 0; i < a->dim; i++)
rx[i / 8] |= (ax[i] > 0) << (7 - (i % 8));
PG_RETURN_VARBIT_P(result);
}
/*
* Get a subvector
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(subvector);
Datum
subvector(PG_FUNCTION_ARGS)
{
Vector *a = PG_GETARG_VECTOR_P(0);
int32 start = PG_GETARG_INT32(1);
int32 count = PG_GETARG_INT32(2);
int32 end = start + count;
float *ax = a->x;
Vector *result;
int dim;
/* Indexing starts at 1, like substring */
if (start < 1)
start = 1;
if (end > a->dim)
end = a->dim + 1;
dim = end - start;
CheckDim(dim);
result = InitVector(dim);
for (int i = 0; i < dim; i++)
result->x[i] = ax[start - 1 + i];
PG_RETURN_POINTER(result);
}
/*
* Concatenate vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_concat);
Datum
vector_concat(PG_FUNCTION_ARGS)
{
Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1);
Vector *result;
int dim = a->dim + b->dim;
CheckDim(dim);
result = InitVector(dim);
for (int i = 0; i < a->dim; i++)
result->x[i] = a->x[i];
for (int i = 0; i < b->dim; i++)
result->x[i + a->dim] = b->x[i];
PG_RETURN_POINTER(result);
}
/* /*
* Internal helper to compare vectors * Internal helper to compare vectors
*/ */
@@ -970,6 +898,9 @@ vector_lt(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0); Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1); Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) < 0); PG_RETURN_BOOL(vector_cmp_internal(a, b) < 0);
} }
@@ -983,6 +914,9 @@ vector_le(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0); Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1); Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) <= 0); PG_RETURN_BOOL(vector_cmp_internal(a, b) <= 0);
} }
@@ -996,6 +930,9 @@ vector_eq(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0); Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1); Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) == 0); PG_RETURN_BOOL(vector_cmp_internal(a, b) == 0);
} }
@@ -1009,6 +946,9 @@ vector_ne(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0); Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1); Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) != 0); PG_RETURN_BOOL(vector_cmp_internal(a, b) != 0);
} }
@@ -1022,6 +962,9 @@ vector_ge(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0); Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1); Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) >= 0); PG_RETURN_BOOL(vector_cmp_internal(a, b) >= 0);
} }
@@ -1035,6 +978,9 @@ vector_gt(PG_FUNCTION_ARGS)
Vector *a = PG_GETARG_VECTOR_P(0); Vector *a = PG_GETARG_VECTOR_P(0);
Vector *b = PG_GETARG_VECTOR_P(1); Vector *b = PG_GETARG_VECTOR_P(1);
/* TODO Remove in 0.7.0 */
CheckDims(a, b);
PG_RETURN_BOOL(vector_cmp_internal(a, b) > 0); PG_RETURN_BOOL(vector_cmp_internal(a, b) > 0);
} }
@@ -1215,3 +1161,26 @@ vector_avg(PG_FUNCTION_ARGS)
PG_RETURN_POINTER(result); PG_RETURN_POINTER(result);
} }
/*
* Convert sparse vector to dense vector
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_to_vector);
Datum
sparsevec_to_vector(PG_FUNCTION_ARGS)
{
SparseVector *svec = PG_GETARG_SPARSEVEC_P(0);
int32 typmod = PG_GETARG_INT32(1);
Vector *result;
int dim = svec->dim;
float *values = SPARSEVEC_VALUES(svec);
CheckDim(dim);
CheckExpectedDim(typmod, dim);
result = InitVector(dim);
for (int i = 0; i < svec->nnz; i++)
result->x[svec->indices[i]] = values[i];
PG_RETURN_POINTER(result);
}

View File

@@ -1,64 +0,0 @@
SELECT hamming_distance(B'111', B'111');
hamming_distance
------------------
0
(1 row)
SELECT hamming_distance(B'111', B'110');
hamming_distance
------------------
1
(1 row)
SELECT hamming_distance(B'111', B'100');
hamming_distance
------------------
2
(1 row)
SELECT hamming_distance(B'111', B'000');
hamming_distance
------------------
3
(1 row)
SELECT hamming_distance(B'111', B'00');
ERROR: different bit lengths 3 and 2
SELECT jaccard_distance(B'1111', B'1111');
jaccard_distance
------------------
0
(1 row)
SELECT jaccard_distance(B'1111', B'1110');
jaccard_distance
------------------
0.25
(1 row)
SELECT jaccard_distance(B'1111', B'1100');
jaccard_distance
------------------
0.5
(1 row)
SELECT jaccard_distance(B'1111', B'1000');
jaccard_distance
------------------
0.75
(1 row)
SELECT jaccard_distance(B'1111', B'0000');
jaccard_distance
------------------
1
(1 row)
SELECT jaccard_distance(B'1100', B'1000');
jaccard_distance
------------------
0.5
(1 row)
SELECT jaccard_distance(B'1111', B'000');
ERROR: different bit lengths 4 and 3

View File

@@ -24,38 +24,6 @@ SELECT '[1e37]'::vector * '[1e37]';
ERROR: value out of range: overflow ERROR: value out of range: overflow
SELECT '[1e-37]'::vector * '[1e-37]'; SELECT '[1e-37]'::vector * '[1e-37]';
ERROR: value out of range: underflow ERROR: value out of range: underflow
SELECT '[1,2,3]'::vector || '[4,5]'::vector;
?column?
-------------
[1,2,3,4,5]
(1 row)
SELECT array_fill(0, ARRAY[16000])::vector || '[1]'::vector;
ERROR: vector cannot have more than 16000 dimensions
SELECT '[1,2,3]'::vector < '[1,2,3]';
?column?
----------
f
(1 row)
SELECT '[1,2,3]'::vector < '[1,2]';
?column?
----------
f
(1 row)
SELECT '[1,2,3]'::vector <= '[1,2,3]';
?column?
----------
t
(1 row)
SELECT '[1,2,3]'::vector <= '[1,2]';
?column?
----------
f
(1 row)
SELECT '[1,2,3]'::vector = '[1,2,3]'; SELECT '[1,2,3]'::vector = '[1,2,3]';
?column? ?column?
---------- ----------
@@ -63,47 +31,7 @@ SELECT '[1,2,3]'::vector = '[1,2,3]';
(1 row) (1 row)
SELECT '[1,2,3]'::vector = '[1,2]'; SELECT '[1,2,3]'::vector = '[1,2]';
?column? ERROR: different vector dimensions 3 and 2
----------
f
(1 row)
SELECT '[1,2,3]'::vector != '[1,2,3]';
?column?
----------
f
(1 row)
SELECT '[1,2,3]'::vector != '[1,2]';
?column?
----------
t
(1 row)
SELECT '[1,2,3]'::vector >= '[1,2,3]';
?column?
----------
t
(1 row)
SELECT '[1,2,3]'::vector >= '[1,2]';
?column?
----------
t
(1 row)
SELECT '[1,2,3]'::vector > '[1,2,3]';
?column?
----------
f
(1 row)
SELECT '[1,2,3]'::vector > '[1,2]';
?column?
----------
t
(1 row)
SELECT vector_cmp('[1,2,3]', '[1,2,3]'); SELECT vector_cmp('[1,2,3]', '[1,2,3]');
vector_cmp vector_cmp
------------ ------------
@@ -280,48 +208,6 @@ SELECT l1_distance('[3e38]'::vector, '[-3e38]');
Infinity Infinity
(1 row) (1 row)
SELECT quantize_binary('[1,0,-1]');
quantize_binary
-----------------
100
(1 row)
SELECT quantize_binary('[0,0.1,-0.2,-0.3,0.4,0.5,0.6,-0.7,0.8,-0.9,1]');
quantize_binary
-----------------
01001110101
(1 row)
SELECT subvector('[1,2,3,4,5]', 1, 3);
subvector
-----------
[1,2,3]
(1 row)
SELECT subvector('[1,2,3,4,5]', 3, 2);
subvector
-----------
[3,4]
(1 row)
SELECT subvector('[1,2,3,4,5]', -1, 3);
subvector
-----------
[1]
(1 row)
SELECT subvector('[1,2,3,4,5]', 3, 9);
subvector
-----------
[3,4,5]
(1 row)
SELECT subvector('[1,2,3,4,5]', 1, 0);
ERROR: vector must have at least 1 dimension
SELECT subvector('[1,2,3,4,5]', 3, -1);
ERROR: vector must have at least 1 dimension
SELECT subvector('[1,2,3,4,5]', -1, 2);
ERROR: vector must have at least 1 dimension
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v; SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v;
avg avg
----------- -----------

View File

@@ -1,21 +0,0 @@
SET enable_seqscan = off;
CREATE TABLE t (val bit(3));
INSERT INTO t (val) VALUES (B'000'), (B'100'), (B'111'), (NULL);
CREATE INDEX ON t USING hnsw (val bit_hamming_ops);
INSERT INTO t (val) VALUES (B'110');
SELECT * FROM t ORDER BY val <~> B'111';
val
-----
111
110
100
000
(4 rows)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <~> (SELECT NULL::bit)) t2;
count
-------
4
(1 row)
DROP TABLE t;

View File

@@ -1,21 +0,0 @@
SET enable_seqscan = off;
CREATE TABLE t (val bit(4));
INSERT INTO t (val) VALUES (B'0000'), (B'1100'), (B'1111'), (NULL);
CREATE INDEX ON t USING hnsw (val bit_jaccard_ops);
INSERT INTO t (val) VALUES (B'1110');
SELECT * FROM t ORDER BY val <%> B'1111';
val
------
1111
1110
1100
0000
(4 rows)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <%> (SELECT NULL::bit)) t2;
count
-------
4
(1 row)
DROP TABLE t;

View File

@@ -0,0 +1,26 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_cosine_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <=> '{0:3,1:3,2:3}/3';
val
-----------------
{0:1,1:1,2:1}/3
{0:1,1:2,2:3}/3
{0:1,1:2,2:4}/3
(3 rows)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <=> '{}/3') t2;
count
-------
3
(1 row)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <=> (SELECT NULL::sparsevec)) t2;
count
-------
3
(1 row)
DROP TABLE t;

View File

@@ -0,0 +1,21 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_ip_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <#> '{0:3,1:3,2:3}/3';
val
-----------------
{0:1,1:2,2:4}/3
{0:1,1:2,2:3}/3
{0:1,1:1,2:1}/3
{}/3
(4 rows)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <#> (SELECT NULL::sparsevec)) t2;
count
-------
4
(1 row)
DROP TABLE t;

View File

@@ -0,0 +1,43 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <-> '{0:3,1:3,2:3}/3';
val
-----------------
{0:1,1:2,2:3}/3
{0:1,1:2,2:4}/3
{0:1,1:1,2:1}/3
{}/3
(4 rows)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <-> (SELECT NULL::sparsevec)) t2;
count
-------
4
(1 row)
SELECT COUNT(*) FROM t;
count
-------
5
(1 row)
TRUNCATE t;
SELECT * FROM t ORDER BY val <-> '{0:3,1:3,2:3}/3';
val
-----
(0 rows)
DROP TABLE t;
-- TODO move
CREATE TABLE t (val sparsevec(1001));
INSERT INTO t (val) VALUES (array_fill(1, ARRAY[1001])::vector::sparsevec);
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
ERROR: sparsevec cannot have more than 1000 non-zero elements for hnsw index
TRUNCATE t;
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
INSERT INTO t (val) VALUES (array_fill(1, ARRAY[1001])::vector::sparsevec);
ERROR: sparsevec cannot have more than 1000 non-zero elements for hnsw index
DROP TABLE t;

View File

@@ -0,0 +1,62 @@
SELECT l2_distance('{}/2'::sparsevec, '{0:3,1:4}/2');
l2_distance
-------------
5
(1 row)
SELECT l2_distance('{}/2'::sparsevec, '{1:1}/2');
l2_distance
-------------
1
(1 row)
SELECT '{}/2'::sparsevec <-> '{0:3,1:4}/2';
?column?
----------
5
(1 row)
SELECT inner_product('{0:1,1:2}/2'::sparsevec, '{0:2,1:4}/2');
inner_product
---------------
10
(1 row)
SELECT sparsevec_negative_inner_product('{0:1,1:2}/2', '{0:2,1:4}/2');
sparsevec_negative_inner_product
----------------------------------
-10
(1 row)
SELECT cosine_distance('{0:1,1:2}/2'::sparsevec, '{0:2,1:4}/2');
cosine_distance
-----------------
0
(1 row)
SELECT cosine_distance('{0:1,1:2}/2'::sparsevec, '{}/2');
cosine_distance
-----------------
NaN
(1 row)
SELECT cosine_distance('{0:1,1:1}/2'::sparsevec, '{0:-1,1:-1}/2');
cosine_distance
-----------------
2
(1 row)
SELECT cosine_distance('{0:1}/2'::sparsevec, '{1:2}/2');
cosine_distance
-----------------
1
(1 row)
SELECT cosine_distance('{}/1'::sparsevec, '{}/1');
cosine_distance
-----------------
NaN
(1 row)
SELECT cosine_distance('{0:1}/2'::sparsevec, '{0:1}/3');
ERROR: different sparsevec dimensions 2 and 3

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@@ -0,0 +1,62 @@
SELECT '{0:1.5,2:3.5}/5'::sparsevec;
sparsevec
-----------------
{0:1.5,2:3.5}/5
(1 row)
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector;
vector
-----------------
[1.5,0,3.5,0,0]
(1 row)
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector(5);
vector
-----------------
[1.5,0,3.5,0,0]
(1 row)
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector(4);
ERROR: expected 4 dimensions, not 5
SELECT '[0,1.5,0,3.5,0]'::vector::sparsevec;
sparsevec
-----------------
{1:1.5,3:3.5}/5
(1 row)
SELECT '{0:0,1:1,2:0}/3'::sparsevec;
sparsevec
-----------
{1:1}/3
(1 row)
SELECT '{1:1,0:1}/2'::sparsevec;
ERROR: indexes must be in ascending order
LINE 1: SELECT '{1:1,0:1}/2'::sparsevec;
^
SELECT '{}/5'::sparsevec;
sparsevec
-----------
{}/5
(1 row)
SELECT '{}/-1'::sparsevec;
ERROR: sparsevec must have at least 1 dimension
LINE 1: SELECT '{}/-1'::sparsevec;
^
SELECT '{}/100001'::sparsevec;
ERROR: sparsevec cannot have more than 100000 dimensions
LINE 1: SELECT '{}/100001'::sparsevec;
^
SELECT '{}/16001'::sparsevec::vector;
ERROR: vector cannot have more than 16000 dimensions
SELECT '{-1:1}/1'::sparsevec;
ERROR: index "-1" is out of range for type sparsevec
LINE 1: SELECT '{-1:1}/1'::sparsevec;
^
SELECT '{1:1}/1'::sparsevec;
ERROR: index must be less than dimensions
LINE 1: SELECT '{1:1}/1'::sparsevec;
^
SELECT '{}/1'::sparsevec(2);
ERROR: expected 2 dimensions, not 1

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@@ -1,13 +0,0 @@
SELECT hamming_distance(B'111', B'111');
SELECT hamming_distance(B'111', B'110');
SELECT hamming_distance(B'111', B'100');
SELECT hamming_distance(B'111', B'000');
SELECT hamming_distance(B'111', B'00');
SELECT jaccard_distance(B'1111', B'1111');
SELECT jaccard_distance(B'1111', B'1110');
SELECT jaccard_distance(B'1111', B'1100');
SELECT jaccard_distance(B'1111', B'1000');
SELECT jaccard_distance(B'1111', B'0000');
SELECT jaccard_distance(B'1100', B'1000');
SELECT jaccard_distance(B'1111', B'000');

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@@ -6,21 +6,8 @@ SELECT '[1,2,3]'::vector * '[4,5,6]';
SELECT '[1e37]'::vector * '[1e37]'; SELECT '[1e37]'::vector * '[1e37]';
SELECT '[1e-37]'::vector * '[1e-37]'; SELECT '[1e-37]'::vector * '[1e-37]';
SELECT '[1,2,3]'::vector || '[4,5]'::vector;
SELECT array_fill(0, ARRAY[16000])::vector || '[1]'::vector;
SELECT '[1,2,3]'::vector < '[1,2,3]';
SELECT '[1,2,3]'::vector < '[1,2]';
SELECT '[1,2,3]'::vector <= '[1,2,3]';
SELECT '[1,2,3]'::vector <= '[1,2]';
SELECT '[1,2,3]'::vector = '[1,2,3]'; SELECT '[1,2,3]'::vector = '[1,2,3]';
SELECT '[1,2,3]'::vector = '[1,2]'; SELECT '[1,2,3]'::vector = '[1,2]';
SELECT '[1,2,3]'::vector != '[1,2,3]';
SELECT '[1,2,3]'::vector != '[1,2]';
SELECT '[1,2,3]'::vector >= '[1,2,3]';
SELECT '[1,2,3]'::vector >= '[1,2]';
SELECT '[1,2,3]'::vector > '[1,2,3]';
SELECT '[1,2,3]'::vector > '[1,2]';
SELECT vector_cmp('[1,2,3]', '[1,2,3]'); SELECT vector_cmp('[1,2,3]', '[1,2,3]');
SELECT vector_cmp('[1,2,3]', '[0,0,0]'); SELECT vector_cmp('[1,2,3]', '[0,0,0]');
@@ -61,17 +48,6 @@ SELECT l1_distance('[0,0]'::vector, '[0,1]');
SELECT l1_distance('[1,2]'::vector, '[3]'); SELECT l1_distance('[1,2]'::vector, '[3]');
SELECT l1_distance('[3e38]'::vector, '[-3e38]'); SELECT l1_distance('[3e38]'::vector, '[-3e38]');
SELECT quantize_binary('[1,0,-1]');
SELECT quantize_binary('[0,0.1,-0.2,-0.3,0.4,0.5,0.6,-0.7,0.8,-0.9,1]');
SELECT subvector('[1,2,3,4,5]', 1, 3);
SELECT subvector('[1,2,3,4,5]', 3, 2);
SELECT subvector('[1,2,3,4,5]', -1, 3);
SELECT subvector('[1,2,3,4,5]', 3, 9);
SELECT subvector('[1,2,3,4,5]', 1, 0);
SELECT subvector('[1,2,3,4,5]', 3, -1);
SELECT subvector('[1,2,3,4,5]', -1, 2);
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v; SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v;
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]', NULL]) v; SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]', NULL]) v;
SELECT avg(v) FROM unnest(ARRAY[]::vector[]) v; SELECT avg(v) FROM unnest(ARRAY[]::vector[]) v;

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@@ -1,12 +0,0 @@
SET enable_seqscan = off;
CREATE TABLE t (val bit(3));
INSERT INTO t (val) VALUES (B'000'), (B'100'), (B'111'), (NULL);
CREATE INDEX ON t USING hnsw (val bit_hamming_ops);
INSERT INTO t (val) VALUES (B'110');
SELECT * FROM t ORDER BY val <~> B'111';
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <~> (SELECT NULL::bit)) t2;
DROP TABLE t;

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@@ -1,12 +0,0 @@
SET enable_seqscan = off;
CREATE TABLE t (val bit(4));
INSERT INTO t (val) VALUES (B'0000'), (B'1100'), (B'1111'), (NULL);
CREATE INDEX ON t USING hnsw (val bit_jaccard_ops);
INSERT INTO t (val) VALUES (B'1110');
SELECT * FROM t ORDER BY val <%> B'1111';
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <%> (SELECT NULL::bit)) t2;
DROP TABLE t;

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@@ -0,0 +1,13 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_cosine_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <=> '{0:3,1:3,2:3}/3';
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <=> '{}/3') t2;
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <=> (SELECT NULL::sparsevec)) t2;
DROP TABLE t;

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@@ -0,0 +1,12 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_ip_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <#> '{0:3,1:3,2:3}/3';
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <#> (SELECT NULL::sparsevec)) t2;
DROP TABLE t;

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@@ -0,0 +1,25 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <-> '{0:3,1:3,2:3}/3';
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <-> (SELECT NULL::sparsevec)) t2;
SELECT COUNT(*) FROM t;
TRUNCATE t;
SELECT * FROM t ORDER BY val <-> '{0:3,1:3,2:3}/3';
DROP TABLE t;
-- TODO move
CREATE TABLE t (val sparsevec(1001));
INSERT INTO t (val) VALUES (array_fill(1, ARRAY[1001])::vector::sparsevec);
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
TRUNCATE t;
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
INSERT INTO t (val) VALUES (array_fill(1, ARRAY[1001])::vector::sparsevec);
DROP TABLE t;

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@@ -0,0 +1,13 @@
SELECT l2_distance('{}/2'::sparsevec, '{0:3,1:4}/2');
SELECT l2_distance('{}/2'::sparsevec, '{1:1}/2');
SELECT '{}/2'::sparsevec <-> '{0:3,1:4}/2';
SELECT inner_product('{0:1,1:2}/2'::sparsevec, '{0:2,1:4}/2');
SELECT sparsevec_negative_inner_product('{0:1,1:2}/2', '{0:2,1:4}/2');
SELECT cosine_distance('{0:1,1:2}/2'::sparsevec, '{0:2,1:4}/2');
SELECT cosine_distance('{0:1,1:2}/2'::sparsevec, '{}/2');
SELECT cosine_distance('{0:1,1:1}/2'::sparsevec, '{0:-1,1:-1}/2');
SELECT cosine_distance('{0:1}/2'::sparsevec, '{1:2}/2');
SELECT cosine_distance('{}/1'::sparsevec, '{}/1');
SELECT cosine_distance('{0:1}/2'::sparsevec, '{0:1}/3');

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@@ -0,0 +1,19 @@
SELECT '{0:1.5,2:3.5}/5'::sparsevec;
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector;
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector(5);
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector(4);
SELECT '[0,1.5,0,3.5,0]'::vector::sparsevec;
SELECT '{0:0,1:1,2:0}/3'::sparsevec;
SELECT '{1:1,0:1}/2'::sparsevec;
SELECT '{}/5'::sparsevec;
SELECT '{}/-1'::sparsevec;
SELECT '{}/100001'::sparsevec;
SELECT '{}/16001'::sparsevec::vector;
SELECT '{-1:1}/1'::sparsevec;
SELECT '{1:1}/1'::sparsevec;
SELECT '{}/1'::sparsevec(2);

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@@ -1,137 +0,0 @@
use strict;
use warnings;
use PostgresNode;
use TestLib;
use Test::More;
my $node;
my @queries = ();
my @expected;
my $limit = 20;
my $dim = 52;
my $max = 2**$dim;
sub test_recall
{
my ($min, $operator) = @_;
my $correct = 0;
my $total = 0;
my $explain = $node->safe_psql("postgres", qq(
SET enable_seqscan = off;
SET hnsw.ef_search = 100;
EXPLAIN ANALYZE SELECT i FROM tst ORDER BY v $operator $queries[0] LIMIT $limit;
));
like($explain, qr/Index Scan/);
for my $i (0 .. $#queries)
{
my $actual = $node->safe_psql("postgres", qq(
SET enable_seqscan = off;
SET hnsw.ef_search = 100;
SELECT i FROM tst ORDER BY v $operator $queries[$i] LIMIT $limit;
));
my @actual_ids = split("\n", $actual);
my @expected_ids = split("\n", $expected[$i]);
my %expected_set = map { $_ => 1 } @expected_ids;
foreach (@actual_ids)
{
if (exists($expected_set{$_}))
{
$correct++;
}
}
$total += $limit;
}
cmp_ok($correct / $total, ">=", $min, $operator);
}
# Initialize node
$node = get_new_node('node');
$node->init;
$node->start;
# Create table
$node->safe_psql("postgres", "CREATE EXTENSION vector;");
$node->safe_psql("postgres", "CREATE TABLE tst (i int4, v bit($dim));");
$node->safe_psql("postgres",
"INSERT INTO tst SELECT i, (random() * $max)::bigint::bit($dim) FROM generate_series(1, 10000) i;"
);
# Generate queries
for (1 .. 20)
{
my $r = int(rand() * $max);
push(@queries, "${r}::bigint::bit($dim)");
}
# Check each index type
my @operators = ("<~>", "<\%>");
my @opclasses = ("bit_hamming_ops", "bit_jaccard_ops");
for my $i (0 .. $#operators)
{
my $operator = $operators[$i];
my $opclass = $opclasses[$i];
# Get exact results
@expected = ();
foreach (@queries)
{
# Handle ties
my $res = $node->safe_psql("postgres", qq(
WITH top AS (
SELECT v $operator $_ AS distance FROM tst ORDER BY v $operator $_ LIMIT $limit
)
SELECT i FROM tst WHERE (v $operator $_) <= (SELECT MAX(distance) FROM top)
));
push(@expected, $res);
}
# Build index serially
$node->safe_psql("postgres", qq(
SET max_parallel_maintenance_workers = 0;
CREATE INDEX idx ON tst USING hnsw (v $opclass);
));
# Test approximate results
my $min = $operator eq "<\%>" ? 0.96 : 0.98;
test_recall($min, $operator);
$node->safe_psql("postgres", "DROP INDEX idx;");
# Build index in parallel in memory
my ($ret, $stdout, $stderr) = $node->psql("postgres", qq(
SET client_min_messages = DEBUG;
SET min_parallel_table_scan_size = 1;
CREATE INDEX idx ON tst USING hnsw (v $opclass);
));
is($ret, 0, $stderr);
like($stderr, qr/using \d+ parallel workers/);
# Test approximate results
test_recall($min, $operator);
$node->safe_psql("postgres", "DROP INDEX idx;");
# Build index in parallel on disk
# Set parallel_workers on table to use workers with low maintenance_work_mem
($ret, $stdout, $stderr) = $node->psql("postgres", qq(
ALTER TABLE tst SET (parallel_workers = 2);
SET client_min_messages = DEBUG;
SET maintenance_work_mem = '4MB';
CREATE INDEX idx ON tst USING hnsw (v $opclass);
ALTER TABLE tst RESET (parallel_workers);
));
is($ret, 0, $stderr);
like($stderr, qr/using \d+ parallel workers/);
like($stderr, qr/hnsw graph no longer fits into maintenance_work_mem/);
$node->safe_psql("postgres", "DROP INDEX idx;");
}
done_testing();