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19 Commits

Author SHA1 Message Date
Andrew Kane
27db2b7145 Align values [skip ci] 2024-03-30 23:52:33 -07:00
Andrew Kane
bb6d3f81f3 Added sparsevec type 2024-03-30 22:48:25 -07:00
Andrew Kane
4b22851bbd Added more vector input tests [skip ci] 2024-03-30 10:17:55 -07:00
Andrew Kane
3acdbf99e8 Added casting to distance functions in tests [skip ci] 2024-03-30 09:05:15 -07:00
Andrew Kane
11ea3d8483 Updated SQL comments [skip ci] 2024-03-30 08:29:01 -07:00
Andrew Kane
2c48e3edc2 Mark type-specific code 2024-03-29 14:01:48 -07:00
Andrew Kane
7d63bb4b98 Fixed flaky test [skip ci] 2024-03-29 11:00:16 -07:00
Andrew Kane
de410a2915 Use variable for max dimemsions [skip ci] 2024-03-29 10:57:16 -07:00
Andrew Kane
64aa99aa31 Added todo [skip ci] 2024-03-29 10:56:24 -07:00
Andrew Kane
997fa167da Removed vector-specific code from HNSW 2024-03-29 10:50:06 -07:00
Andrew Kane
67eec4edbf Improved tuning section [skip ci] 2024-03-27 22:04:28 -07:00
Andrew Kane
396090d8e0 Improved code [skip ci] 2024-03-27 21:38:22 -07:00
Andrew Kane
ba18942fcf Removed normvec from IVFFlat for simplicity (no difference in performance) 2024-03-27 16:41:17 -07:00
Andrew Kane
8e59455c3c Removed normvec for simplicity (no difference in performance) 2024-03-27 16:33:11 -07:00
Andrew Kane
bd50e3067d Updated readme [skip ci] 2024-03-27 14:14:49 -07:00
Andrew Kane
af9d4ad659 Updated readme [skip ci] 2024-03-27 14:12:08 -07:00
Andrew Kane
08abb63cbe Added notes about NULL vectors [skip ci] 2024-03-27 11:50:37 -07:00
Andrew Kane
06b8556a49 Revert "Updated readme [skip ci]"
This reverts commit 3f674c9994.
2024-03-25 23:33:46 -07:00
Andrew Kane
3f674c9994 Updated readme [skip ci] 2024-03-25 23:33:17 -07:00
45 changed files with 1530 additions and 620 deletions

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@@ -1,9 +1,6 @@
## 0.7.0 (unreleased) ## 0.7.0 (unreleased)
- Added support for binary vectors to HNSW - Added `sparsevec` type
- Added `hamming_distance` function
- Added `jaccard_distance` function
- Added `quantize_binary` function
## 0.6.2 (2024-03-18) ## 0.6.2 (2024-03-18)

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@@ -3,8 +3,8 @@ EXTVERSION = 0.6.2
MODULE_big = vector MODULE_big = vector
DATA = $(wildcard sql/*--*.sql) DATA = $(wildcard sql/*--*.sql)
OBJS = src/bitvector.o src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/vector.o OBJS = src/hnsw.o src/hnswbuild.o src/hnswinsert.o src/hnswscan.o src/hnswutils.o src/hnswvacuum.o src/ivfbuild.o src/ivfflat.o src/ivfinsert.o src/ivfkmeans.o src/ivfscan.o src/ivfutils.o src/ivfvacuum.o src/sparsevec.o src/vector.o
HEADERS = src/vector.h HEADERS = src/sparsevec.h src/vector.h
TESTS = $(wildcard test/sql/*.sql) TESTS = $(wildcard test/sql/*.sql)
REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS)) REGRESS = $(patsubst test/sql/%.sql,%,$(TESTS))

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@@ -1,8 +1,8 @@
EXTENSION = vector EXTENSION = vector
EXTVERSION = 0.6.2 EXTVERSION = 0.6.2
OBJS = src\bitvector.obj src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\vector.obj OBJS = src\hnsw.obj src\hnswbuild.obj src\hnswinsert.obj src\hnswscan.obj src\hnswutils.obj src\hnswvacuum.obj src\ivfbuild.obj src\ivfflat.obj src\ivfinsert.obj src\ivfkmeans.obj src\ivfscan.obj src\ivfutils.obj src\ivfvacuum.obj src\sparsevec.obj src\vector.obj
HEADERS = src\vector.h HEADERS = src\sparsevec.h src\vector.h
REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged REGRESS = btree cast copy functions input ivfflat_cosine ivfflat_ip ivfflat_l2 ivfflat_options ivfflat_unlogged
REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION) REGRESS_OPTS = --inputdir=test --load-extension=$(EXTENSION)

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@@ -5,7 +5,7 @@ Open-source vector similarity search for Postgres
Store your vectors with the rest of your data. Supports: Store your vectors with the rest of your data. Supports:
- exact and approximate nearest neighbor search - exact and approximate nearest neighbor search
- L2 distance, inner product, cosine distance, and more - L2 distance, inner product, and cosine distance
- any [language](#languages) with a Postgres client - any [language](#languages) with a Postgres client
Plus [ACID](https://en.wikipedia.org/wiki/ACID) compliance, point-in-time recovery, JOINs, and all of the other [great features](https://www.postgresql.org/about/) of Postgres Plus [ACID](https://en.wikipedia.org/wiki/ACID) compliance, point-in-time recovery, JOINs, and all of the other [great features](https://www.postgresql.org/about/) of Postgres
@@ -221,19 +221,7 @@ Cosine distance
CREATE INDEX ON items USING hnsw (embedding vector_cosine_ops); CREATE INDEX ON items USING hnsw (embedding vector_cosine_ops);
``` ```
Hamming distance - added in 0.7.0 Vectors with up to 2,000 dimensions can be indexed.
```sql
CREATE INDEX ON items USING hnsw (embedding bit_hamming_ops);
```
Jaccard distance - added in 0.7.0
```sql
CREATE INDEX ON items USING hnsw (embedding bit_jaccard_ops);
```
Vectors with up to 2,000 dimensions can be indexed, or bit vectors with up to 64,000 dimensions.
### Index Options ### Index Options
@@ -427,7 +415,19 @@ You can use [Reciprocal Rank Fusion](https://github.com/pgvector/pgvector-python
### Tuning ### Tuning
Use a tool like [PgTune](https://pgtune.leopard.in.ua/) to set initial values for Postgres server parameters. Use a tool like [PgTune](https://pgtune.leopard.in.ua/) to set initial values for Postgres server parameters. For instance, `shared_buffers` should typically be 25% of the servers memory. You can find the config file with:
```sql
SHOW config_file;
```
And check individual settings with:
```sql
SHOW shared_buffers;
```
Be sure to restart Postgres for changes to take effect.
### Loading ### Loading
@@ -523,6 +523,26 @@ Scale vertically by increasing memory, CPU, and storage on a single instance. Us
Scale horizontally with [replicas](https://www.postgresql.org/docs/current/hot-standby.html), or use [Citus](https://github.com/citusdata/citus) or another approach for sharding ([example](https://github.com/pgvector/pgvector-python/blob/master/examples/citus.py)). Scale horizontally with [replicas](https://www.postgresql.org/docs/current/hot-standby.html), or use [Citus](https://github.com/citusdata/citus) or another approach for sharding ([example](https://github.com/pgvector/pgvector-python/blob/master/examples/citus.py)).
## Sparse Vectors
Create a sparse vector column with 10 dimensions
```sql
CREATE TABLE items (id bigserial PRIMARY KEY, embedding sparsevec(10));
```
Insert vectors
```sql
INSERT INTO items (embedding) VALUES ('{0:1,1:2,2:3}/10'), ('{0:4,1:5,2:6}/10');
```
Get the nearest neighbors by L2 distance
```sql
SELECT * FROM items ORDER BY embedding <-> '{0:3,1:1,2:2}/10' LIMIT 5;
```
## Languages ## Languages
Use pgvector from any language with a Postgres client. You can even generate and store vectors in one language and query them in another. Use pgvector from any language with a Postgres client. You can even generate and store vectors in one language and query them in another.
@@ -683,6 +703,8 @@ ALTER TABLE items ALTER COLUMN embedding SET STORAGE PLAIN;
Results are limited by the size of the dynamic candidate list (`hnsw.ef_search`). There may be even less results due to dead tuples or filtering conditions in the query. We recommend setting `hnsw.ef_search` to at least twice the `LIMIT` of the query. If you need more than 500 results, use an IVFFlat index instead. Results are limited by the size of the dynamic candidate list (`hnsw.ef_search`). There may be even less results due to dead tuples or filtering conditions in the query. We recommend setting `hnsw.ef_search` to at least twice the `LIMIT` of the query. If you need more than 500 results, use an IVFFlat index instead.
Also, note that `NULL` vectors are not indexed (as well as zero vectors for cosine distance).
#### Why are there less results for a query after adding an IVFFlat index? #### Why are there less results for a query after adding an IVFFlat index?
The index was likely created with too little data for the number of lists. Drop the index until the table has more data. The index was likely created with too little data for the number of lists. Drop the index until the table has more data.
@@ -693,11 +715,13 @@ DROP INDEX index_name;
Results can also be limited by the number of probes (`ivfflat.probes`). Results can also be limited by the number of probes (`ivfflat.probes`).
Also, note that `NULL` vectors are not indexed (as well as zero vectors for cosine distance).
## Reference ## Reference
### Vector Type ### Vector Type
Each vector takes `4 * dimensions + 8` bytes of storage. Each element is a single precision floating-point number (like the `real` type in Postgres), and all elements must be finite (no `NaN`, `Infinity` or `-Infinity`). Vectors can have up to 16,000 dimensions. Each vector takes `4 * dimensions + 8` bytes of storage. Each element is a single-precision floating-point number (like the `real` type in Postgres), and all elements must be finite (no `NaN`, `Infinity` or `-Infinity`). Vectors can have up to 16,000 dimensions.
### Vector Operators ### Vector Operators
@@ -718,31 +742,16 @@ cosine_distance(vector, vector) → double precision | cosine distance |
inner_product(vector, vector) → double precision | inner product | inner_product(vector, vector) → double precision | inner product |
l2_distance(vector, vector) → double precision | Euclidean distance | l2_distance(vector, vector) → double precision | Euclidean distance |
l1_distance(vector, vector) → double precision | taxicab distance | 0.5.0 l1_distance(vector, vector) → double precision | taxicab distance | 0.5.0
quantize_binary(vector) → bit | quantize | 0.7.0
vector_dims(vector) → integer | number of dimensions | vector_dims(vector) → integer | number of dimensions |
vector_norm(vector) → double precision | Euclidean norm | vector_norm(vector) → double precision | Euclidean norm |
### Aggregate Functions ### Vector Aggregate Functions
Function | Description | Added Function | Description | Added
--- | --- | --- --- | --- | ---
avg(vector) → vector | average | avg(vector) → vector | average |
sum(vector) → vector | sum | 0.5.0 sum(vector) → vector | sum | 0.5.0
### Bit Operators
Operator | Description | Added
--- | --- | ---
<~> | Hamming distance | 0.7.0
<%> | Jaccard distance | 0.7.0
### Bit Functions
Function | Description | Added
--- | --- | ---
hamming_distance(bit, bit) → double precision | Hamming distance | 0.7.0
jaccard_distance(bit, bit) → double precision | Jaccard distance | 0.7.0
## Installation Notes - Linux and Mac ## Installation Notes - Linux and Mac
### Postgres Location ### Postgres Location

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@@ -1,31 +1,95 @@
-- complain if script is sourced in psql, rather than via CREATE EXTENSION -- complain if script is sourced in psql, rather than via CREATE EXTENSION
\echo Use "ALTER EXTENSION vector UPDATE TO '0.7.0'" to load this file. \quit \echo Use "ALTER EXTENSION vector UPDATE TO '0.7.0'" to load this file. \quit
CREATE FUNCTION quantize_binary(vector) RETURNS bit CREATE TYPE sparsevec;
CREATE FUNCTION sparsevec_in(cstring, oid, integer) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION hamming_distance(bit, bit) RETURNS float8 CREATE FUNCTION sparsevec_out(sparsevec) RETURNS cstring
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION jaccard_distance(bit, bit) RETURNS float8 CREATE FUNCTION sparsevec_typmod_in(cstring[]) RETURNS integer
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE OPERATOR <~> ( CREATE FUNCTION sparsevec_recv(internal, oid, integer) RETURNS sparsevec
LEFTARG = bit, RIGHTARG = bit, PROCEDURE = hamming_distance, AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
COMMUTATOR = '<~>'
CREATE FUNCTION sparsevec_send(sparsevec) RETURNS bytea
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE TYPE sparsevec (
INPUT = sparsevec_in,
OUTPUT = sparsevec_out,
TYPMOD_IN = sparsevec_typmod_in,
RECEIVE = sparsevec_recv,
SEND = sparsevec_send,
STORAGE = external
); );
CREATE OPERATOR <%> ( CREATE FUNCTION l2_distance(sparsevec, sparsevec) RETURNS float8
LEFTARG = bit, RIGHTARG = bit, PROCEDURE = jaccard_distance, AS 'MODULE_PATHNAME', 'sparsevec_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
COMMUTATOR = '<%>'
CREATE FUNCTION inner_product(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION cosine_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_norm(sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_l2_squared_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_negative_inner_product(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec(sparsevec, integer, boolean) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION vector_to_sparsevec(vector, integer, boolean) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_to_vector(sparsevec, integer, boolean) RETURNS vector
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE CAST (sparsevec AS sparsevec)
WITH FUNCTION sparsevec(sparsevec, integer, boolean) AS IMPLICIT;
CREATE CAST (sparsevec AS vector)
WITH FUNCTION sparsevec_to_vector(sparsevec, integer, boolean) AS IMPLICIT;
CREATE CAST (vector AS sparsevec)
WITH FUNCTION vector_to_sparsevec(vector, integer, boolean) AS IMPLICIT;
CREATE OPERATOR <-> (
LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = l2_distance,
COMMUTATOR = '<->'
); );
CREATE OPERATOR CLASS bit_hamming_ops CREATE OPERATOR <#> (
FOR TYPE bit USING hnsw AS LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = sparsevec_negative_inner_product,
OPERATOR 1 <~> (bit, bit) FOR ORDER BY float_ops, COMMUTATOR = '<#>'
FUNCTION 1 hamming_distance(bit, bit); );
CREATE OPERATOR CLASS bit_jaccard_ops CREATE OPERATOR <=> (
FOR TYPE bit USING hnsw AS LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = cosine_distance,
OPERATOR 1 <%> (bit, bit) FOR ORDER BY float_ops, COMMUTATOR = '<=>'
FUNCTION 1 jaccard_distance(bit, bit); );
CREATE OPERATOR CLASS sparsevec_l2_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <-> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_l2_squared_distance(sparsevec, sparsevec);
CREATE OPERATOR CLASS sparsevec_ip_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <#> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_negative_inner_product(sparsevec, sparsevec);
CREATE OPERATOR CLASS sparsevec_cosine_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <=> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_negative_inner_product(sparsevec, sparsevec),
FUNCTION 2 sparsevec_norm(sparsevec);

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@@ -1,7 +1,7 @@
-- complain if script is sourced in psql, rather than via CREATE EXTENSION -- complain if script is sourced in psql, rather than via CREATE EXTENSION
\echo Use "CREATE EXTENSION vector" to load this file. \quit \echo Use "CREATE EXTENSION vector" to load this file. \quit
-- type -- vector type
CREATE TYPE vector; CREATE TYPE vector;
@@ -29,7 +29,7 @@ CREATE TYPE vector (
STORAGE = external STORAGE = external
); );
-- functions -- vector functions
CREATE FUNCTION l2_distance(vector, vector) RETURNS float8 CREATE FUNCTION l2_distance(vector, vector) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
@@ -58,10 +58,7 @@ CREATE FUNCTION vector_sub(vector, vector) RETURNS vector
CREATE FUNCTION vector_mul(vector, vector) RETURNS vector CREATE FUNCTION vector_mul(vector, vector) RETURNS vector
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION quantize_binary(vector) RETURNS bit -- vector private functions
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- private functions
CREATE FUNCTION vector_lt(vector, vector) RETURNS bool CREATE FUNCTION vector_lt(vector, vector) RETURNS bool
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
@@ -102,7 +99,7 @@ CREATE FUNCTION vector_avg(double precision[]) RETURNS vector
CREATE FUNCTION vector_combine(double precision[], double precision[]) RETURNS double precision[] CREATE FUNCTION vector_combine(double precision[], double precision[]) RETURNS double precision[]
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- aggregates -- vector aggregates
CREATE AGGREGATE avg(vector) ( CREATE AGGREGATE avg(vector) (
SFUNC = vector_accum, SFUNC = vector_accum,
@@ -120,7 +117,7 @@ CREATE AGGREGATE sum(vector) (
PARALLEL = SAFE PARALLEL = SAFE
); );
-- cast functions -- vector cast functions
CREATE FUNCTION vector(vector, integer, boolean) RETURNS vector CREATE FUNCTION vector(vector, integer, boolean) RETURNS vector
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
@@ -140,7 +137,7 @@ CREATE FUNCTION array_to_vector(numeric[], integer, boolean) RETURNS vector
CREATE FUNCTION vector_to_float4(vector, integer, boolean) RETURNS real[] CREATE FUNCTION vector_to_float4(vector, integer, boolean) RETURNS real[]
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- casts -- vector casts
CREATE CAST (vector AS vector) CREATE CAST (vector AS vector)
WITH FUNCTION vector(vector, integer, boolean) AS IMPLICIT; WITH FUNCTION vector(vector, integer, boolean) AS IMPLICIT;
@@ -160,7 +157,7 @@ CREATE CAST (double precision[] AS vector)
CREATE CAST (numeric[] AS vector) CREATE CAST (numeric[] AS vector)
WITH FUNCTION array_to_vector(numeric[], integer, boolean) AS ASSIGNMENT; WITH FUNCTION array_to_vector(numeric[], integer, boolean) AS ASSIGNMENT;
-- operators -- vector operators
CREATE OPERATOR <-> ( CREATE OPERATOR <-> (
LEFTARG = vector, RIGHTARG = vector, PROCEDURE = l2_distance, LEFTARG = vector, RIGHTARG = vector, PROCEDURE = l2_distance,
@@ -243,7 +240,7 @@ CREATE ACCESS METHOD hnsw TYPE INDEX HANDLER hnswhandler;
COMMENT ON ACCESS METHOD hnsw IS 'hnsw index access method'; COMMENT ON ACCESS METHOD hnsw IS 'hnsw index access method';
-- opclasses -- vector opclasses
CREATE OPERATOR CLASS vector_ops CREATE OPERATOR CLASS vector_ops
DEFAULT FOR TYPE vector USING btree AS DEFAULT FOR TYPE vector USING btree AS
@@ -291,30 +288,109 @@ CREATE OPERATOR CLASS vector_cosine_ops
FUNCTION 1 vector_negative_inner_product(vector, vector), FUNCTION 1 vector_negative_inner_product(vector, vector),
FUNCTION 2 vector_norm(vector); FUNCTION 2 vector_norm(vector);
-- bit functions --- sparsevec type
CREATE FUNCTION hamming_distance(bit, bit) RETURNS float8 CREATE TYPE sparsevec;
CREATE FUNCTION sparsevec_in(cstring, oid, integer) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION jaccard_distance(bit, bit) RETURNS float8 CREATE FUNCTION sparsevec_out(sparsevec) RETURNS cstring
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE; AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE OPERATOR <~> ( CREATE FUNCTION sparsevec_typmod_in(cstring[]) RETURNS integer
LEFTARG = bit, RIGHTARG = bit, PROCEDURE = hamming_distance, AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
COMMUTATOR = '<~>'
CREATE FUNCTION sparsevec_recv(internal, oid, integer) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_send(sparsevec) RETURNS bytea
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE TYPE sparsevec (
INPUT = sparsevec_in,
OUTPUT = sparsevec_out,
TYPMOD_IN = sparsevec_typmod_in,
RECEIVE = sparsevec_recv,
SEND = sparsevec_send,
STORAGE = external
); );
CREATE OPERATOR <%> ( -- sparsevec functions
LEFTARG = bit, RIGHTARG = bit, PROCEDURE = jaccard_distance,
COMMUTATOR = '<%>' CREATE FUNCTION l2_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_l2_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION inner_product(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_inner_product' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION cosine_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME', 'sparsevec_cosine_distance' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_norm(sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- sparsevec private functions
CREATE FUNCTION sparsevec_l2_squared_distance(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_negative_inner_product(sparsevec, sparsevec) RETURNS float8
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- sparsevec cast functions
CREATE FUNCTION sparsevec(sparsevec, integer, boolean) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION vector_to_sparsevec(vector, integer, boolean) RETURNS sparsevec
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
CREATE FUNCTION sparsevec_to_vector(sparsevec, integer, boolean) RETURNS vector
AS 'MODULE_PATHNAME' LANGUAGE C IMMUTABLE STRICT PARALLEL SAFE;
-- sparsevec casts
CREATE CAST (sparsevec AS sparsevec)
WITH FUNCTION sparsevec(sparsevec, integer, boolean) AS IMPLICIT;
CREATE CAST (sparsevec AS vector)
WITH FUNCTION sparsevec_to_vector(sparsevec, integer, boolean) AS IMPLICIT;
CREATE CAST (vector AS sparsevec)
WITH FUNCTION vector_to_sparsevec(vector, integer, boolean) AS IMPLICIT;
-- sparsevec operators
CREATE OPERATOR <-> (
LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = l2_distance,
COMMUTATOR = '<->'
); );
CREATE OPERATOR CLASS bit_hamming_ops CREATE OPERATOR <#> (
FOR TYPE bit USING hnsw AS LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = sparsevec_negative_inner_product,
OPERATOR 1 <~> (bit, bit) FOR ORDER BY float_ops, COMMUTATOR = '<#>'
FUNCTION 1 hamming_distance(bit, bit); );
CREATE OPERATOR CLASS bit_jaccard_ops CREATE OPERATOR <=> (
FOR TYPE bit USING hnsw AS LEFTARG = sparsevec, RIGHTARG = sparsevec, PROCEDURE = cosine_distance,
OPERATOR 1 <%> (bit, bit) FOR ORDER BY float_ops, COMMUTATOR = '<=>'
FUNCTION 1 jaccard_distance(bit, bit); );
-- sparsevec opclasses
CREATE OPERATOR CLASS sparsevec_l2_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <-> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_l2_squared_distance(sparsevec, sparsevec);
CREATE OPERATOR CLASS sparsevec_ip_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <#> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_negative_inner_product(sparsevec, sparsevec);
CREATE OPERATOR CLASS sparsevec_cosine_ops
FOR TYPE sparsevec USING hnsw AS
OPERATOR 1 <=> (sparsevec, sparsevec) FOR ORDER BY float_ops,
FUNCTION 1 sparsevec_negative_inner_product(sparsevec, sparsevec),
FUNCTION 2 sparsevec_norm(sparsevec);

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@@ -1,90 +0,0 @@
#include "postgres.h"
#include "bitvector.h"
#include "port/pg_bitutils.h"
#include "utils/varbit.h"
#if PG_VERSION_NUM >= 160000
#include "varatt.h"
#endif
/*
* Allocate and initialize a new bit vector
*/
VarBit *
InitBitVector(int dim)
{
VarBit *result;
int size;
size = VARBITTOTALLEN(dim);
result = (VarBit *) palloc0(size);
SET_VARSIZE(result, size);
VARBITLEN(result) = dim;
return result;
}
/*
* Ensure same number of bits
*/
static inline void
CheckBitLengths(uint32 aLen, uint32 bLen)
{
if (aLen != bLen)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("different bit lengths %u and %u", aLen, bLen)));
}
/*
* Get the Hamming distance between two bit strings
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(hamming_distance);
Datum
hamming_distance(PG_FUNCTION_ARGS)
{
VarBit *a = PG_GETARG_VARBIT_P(0);
VarBit *b = PG_GETARG_VARBIT_P(1);
unsigned char *ax = VARBITS(a);
unsigned char *bx = VARBITS(b);
uint64 distance = 0;
CheckBitLengths(VARBITLEN(a), VARBITLEN(b));
/* TODO Improve performance */
for (uint32 i = 0; i < VARBITBYTES(a); i++)
distance += pg_number_of_ones[ax[i] ^ bx[i]];
PG_RETURN_FLOAT8((double) distance);
}
/*
* Get the Jaccard distance between two bit strings
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(jaccard_distance);
Datum
jaccard_distance(PG_FUNCTION_ARGS)
{
VarBit *a = PG_GETARG_VARBIT_P(0);
VarBit *b = PG_GETARG_VARBIT_P(1);
unsigned char *ax = VARBITS(a);
unsigned char *bx = VARBITS(b);
uint64 ab = 0;
uint64 aa;
uint64 bb;
CheckBitLengths(VARBITLEN(a), VARBITLEN(b));
/* TODO Improve performance */
for (uint32 i = 0; i < VARBITBYTES(a); i++)
ab += pg_number_of_ones[ax[i] & bx[i]];
if (ab == 0)
PG_RETURN_FLOAT8(1);
aa = pg_popcount((char *) ax, VARBITBYTES(a));
bb = pg_popcount((char *) bx, VARBITBYTES(b));
PG_RETURN_FLOAT8(1 - (ab / ((double) (aa + bb - ab))));
}

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@@ -1,8 +0,0 @@
#ifndef BITVECTOR_H
#define BITVECTOR_H
#include "utils/varbit.h"
VarBit *InitBitVector(int dim);
#endif

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@@ -17,6 +17,7 @@
#endif #endif
#define HNSW_MAX_DIM 2000 #define HNSW_MAX_DIM 2000
#define HNSW_MAX_NNZ 1000
/* Support functions */ /* Support functions */
#define HNSW_DISTANCE_PROC 1 #define HNSW_DISTANCE_PROC 1
@@ -55,6 +56,12 @@
#define HNSW_UPDATE_ENTRY_GREATER 1 #define HNSW_UPDATE_ENTRY_GREATER 1
#define HNSW_UPDATE_ENTRY_ALWAYS 2 #define HNSW_UPDATE_ENTRY_ALWAYS 2
typedef enum HnswType
{
HNSW_TYPE_VECTOR,
HNSW_TYPE_SPARSEVEC
} HnswType;
/* Build phases */ /* Build phases */
/* PROGRESS_CREATEIDX_SUBPHASE_INITIALIZE is 1 */ /* PROGRESS_CREATEIDX_SUBPHASE_INITIALIZE is 1 */
#define PROGRESS_HNSW_PHASE_LOAD 2 #define PROGRESS_HNSW_PHASE_LOAD 2
@@ -242,6 +249,7 @@ typedef struct HnswBuildState
Relation index; Relation index;
IndexInfo *indexInfo; IndexInfo *indexInfo;
ForkNumber forkNum; ForkNumber forkNum;
HnswType type;
/* Settings */ /* Settings */
int dimensions; int dimensions;
@@ -262,7 +270,6 @@ typedef struct HnswBuildState
HnswGraph *graph; HnswGraph *graph;
double ml; double ml;
int maxLevel; int maxLevel;
Vector *normvec;
/* Memory */ /* Memory */
MemoryContext graphCtx; MemoryContext graphCtx;
@@ -367,7 +374,9 @@ typedef struct HnswVacuumState
int HnswGetM(Relation index); int HnswGetM(Relation index);
int HnswGetEfConstruction(Relation index); int HnswGetEfConstruction(Relation index);
FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum); FmgrInfo *HnswOptionalProcInfo(Relation index, uint16 procnum);
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result); HnswType HnswGetType(Relation index);
bool HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, HnswType type);
void HnswCheckValue(Datum value, HnswType type);
Buffer HnswNewBuffer(Relation index, ForkNumber forkNum); Buffer HnswNewBuffer(Relation index, ForkNumber forkNum);
void HnswInitPage(Buffer buf, Page page); void HnswInitPage(Buffer buf, Page page);
void HnswInit(void); void HnswInit(void);

View File

@@ -44,7 +44,6 @@
#include "access/xact.h" #include "access/xact.h"
#include "access/xloginsert.h" #include "access/xloginsert.h"
#include "catalog/index.h" #include "catalog/index.h"
#include "catalog/pg_type_d.h"
#include "commands/progress.h" #include "commands/progress.h"
#include "hnsw.h" #include "hnsw.h"
#include "miscadmin.h" #include "miscadmin.h"
@@ -487,10 +486,13 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heaptid, Hn
/* Detoast once for all calls */ /* Detoast once for all calls */
Datum value = PointerGetDatum(PG_DETOAST_DATUM(values[0])); Datum value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
/* Check value */
HnswCheckValue(value, buildstate->type);
/* Normalize if needed */ /* Normalize if needed */
if (buildstate->normprocinfo != NULL) if (buildstate->normprocinfo != NULL)
{ {
if (!HnswNormValue(buildstate->normprocinfo, buildstate->collation, &value, buildstate->normvec)) if (!HnswNormValue(buildstate->normprocinfo, buildstate->collation, &value, buildstate->type))
return false; return false;
} }
@@ -673,20 +675,21 @@ static void
InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, IndexInfo *indexInfo, ForkNumber forkNum) InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, IndexInfo *indexInfo, ForkNumber forkNum)
{ {
int maxDimensions = HNSW_MAX_DIM; int maxDimensions = HNSW_MAX_DIM;
Oid typid = TupleDescAttr(index->rd_att, 0)->atttypid;
if (typid == BITOID || typid == VARBITOID)
maxDimensions *= 32;
buildstate->heap = heap; buildstate->heap = heap;
buildstate->index = index; buildstate->index = index;
buildstate->indexInfo = indexInfo; buildstate->indexInfo = indexInfo;
buildstate->forkNum = forkNum; buildstate->forkNum = forkNum;
buildstate->type = HnswGetType(index);
buildstate->m = HnswGetM(index); buildstate->m = HnswGetM(index);
buildstate->efConstruction = HnswGetEfConstruction(index); buildstate->efConstruction = HnswGetEfConstruction(index);
buildstate->dimensions = TupleDescAttr(index->rd_att, 0)->atttypmod; buildstate->dimensions = TupleDescAttr(index->rd_att, 0)->atttypmod;
/* No limit on sparse vector dimensions */
if (buildstate->type == HNSW_TYPE_SPARSEVEC)
maxDimensions = INT_MAX;
/* Require column to have dimensions to be indexed */ /* Require column to have dimensions to be indexed */
if (buildstate->dimensions < 0) if (buildstate->dimensions < 0)
elog(ERROR, "column does not have dimensions"); elog(ERROR, "column does not have dimensions");
@@ -710,9 +713,6 @@ InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, Index
buildstate->ml = HnswGetMl(buildstate->m); buildstate->ml = HnswGetMl(buildstate->m);
buildstate->maxLevel = HnswGetMaxLevel(buildstate->m); buildstate->maxLevel = HnswGetMaxLevel(buildstate->m);
/* Reuse for each tuple */
buildstate->normvec = InitVector(buildstate->dimensions);
buildstate->graphCtx = GenerationContextCreate(CurrentMemoryContext, buildstate->graphCtx = GenerationContextCreate(CurrentMemoryContext,
"Hnsw build graph context", "Hnsw build graph context",
#if PG_VERSION_NUM >= 150000 #if PG_VERSION_NUM >= 150000
@@ -736,7 +736,6 @@ InitBuildState(HnswBuildState * buildstate, Relation heap, Relation index, Index
static void static void
FreeBuildState(HnswBuildState * buildstate) FreeBuildState(HnswBuildState * buildstate)
{ {
pfree(buildstate->normvec);
MemoryContextDelete(buildstate->graphCtx); MemoryContextDelete(buildstate->graphCtx);
MemoryContextDelete(buildstate->tmpCtx); MemoryContextDelete(buildstate->tmpCtx);
} }

View File

@@ -614,15 +614,19 @@ HnswInsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_ti
Datum value; Datum value;
FmgrInfo *normprocinfo; FmgrInfo *normprocinfo;
Oid collation = index->rd_indcollation[0]; Oid collation = index->rd_indcollation[0];
HnswType type = HnswGetType(index);
/* Detoast once for all calls */ /* Detoast once for all calls */
value = PointerGetDatum(PG_DETOAST_DATUM(values[0])); value = PointerGetDatum(PG_DETOAST_DATUM(values[0]));
/* Check value */
HnswCheckValue(value, type);
/* Normalize if needed */ /* Normalize if needed */
normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC); normprocinfo = HnswOptionalProcInfo(index, HNSW_NORM_PROC);
if (normprocinfo != NULL) if (normprocinfo != NULL)
{ {
if (!HnswNormValue(normprocinfo, collation, &value, NULL)) if (!HnswNormValue(normprocinfo, collation, &value, type))
return; return;
} }

View File

@@ -1,8 +1,6 @@
#include "postgres.h" #include "postgres.h"
#include "access/relscan.h" #include "access/relscan.h"
#include "bitvector.h"
#include "catalog/pg_type_d.h"
#include "hnsw.h" #include "hnsw.h"
#include "pgstat.h" #include "pgstat.h"
#include "storage/bufmgr.h" #include "storage/bufmgr.h"
@@ -42,29 +40,6 @@ GetScanItems(IndexScanDesc scan, Datum q)
return HnswSearchLayer(base, q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL); return HnswSearchLayer(base, q, ep, hnsw_ef_search, 0, index, procinfo, collation, m, false, NULL);
} }
/*
* Get dimensions from metapage
*/
static int
GetDimensions(Relation index)
{
Buffer buf;
Page page;
HnswMetaPage metap;
int dimensions;
buf = ReadBuffer(index, HNSW_METAPAGE_BLKNO);
LockBuffer(buf, BUFFER_LOCK_SHARE);
page = BufferGetPage(buf);
metap = HnswPageGetMeta(page);
dimensions = metap->dimensions;
UnlockReleaseBuffer(buf);
return dimensions;
}
/* /*
* Get scan value * Get scan value
*/ */
@@ -75,15 +50,7 @@ GetScanValue(IndexScanDesc scan)
Datum value; Datum value;
if (scan->orderByData->sk_flags & SK_ISNULL) if (scan->orderByData->sk_flags & SK_ISNULL)
{ value = PointerGetDatum(NULL);
Oid typid = TupleDescAttr(scan->indexRelation->rd_att, 0)->atttypid;
int dimensions = GetDimensions(scan->indexRelation);
if (typid == BITOID || typid == VARBITOID)
value = PointerGetDatum(InitBitVector(dimensions));
else
value = PointerGetDatum(InitVector(dimensions));
}
else else
{ {
value = scan->orderByData->sk_argument; value = scan->orderByData->sk_argument;
@@ -94,7 +61,7 @@ GetScanValue(IndexScanDesc scan)
/* Fine if normalization fails */ /* Fine if normalization fails */
if (so->normprocinfo != NULL) if (so->normprocinfo != NULL)
HnswNormValue(so->normprocinfo, so->collation, &value, NULL); HnswNormValue(so->normprocinfo, so->collation, &value, HnswGetType(scan->indexRelation));
} }
return value; return value;

View File

@@ -3,12 +3,15 @@
#include <math.h> #include <math.h>
#include "access/generic_xlog.h" #include "access/generic_xlog.h"
#include "catalog/pg_type.h"
#include "hnsw.h" #include "hnsw.h"
#include "lib/pairingheap.h" #include "lib/pairingheap.h"
#include "sparsevec.h"
#include "storage/bufmgr.h" #include "storage/bufmgr.h"
#include "utils/datum.h" #include "utils/datum.h"
#include "utils/memdebug.h" #include "utils/memdebug.h"
#include "utils/rel.h" #include "utils/rel.h"
#include "utils/syscache.h"
#include "vector.h" #include "vector.h"
#if PG_VERSION_NUM >= 130000 #if PG_VERSION_NUM >= 130000
@@ -149,6 +152,32 @@ HnswOptionalProcInfo(Relation index, uint16 procnum)
return index_getprocinfo(index, 1, procnum); return index_getprocinfo(index, 1, procnum);
} }
/*
* Get vector type
*/
HnswType
HnswGetType(Relation index)
{
Oid typeOid = TupleDescAttr(index->rd_att, 0)->atttypid;
HeapTuple tuple;
Form_pg_type type;
int result;
tuple = SearchSysCache1(TYPEOID, ObjectIdGetDatum(typeOid));
if (!HeapTupleIsValid(tuple))
elog(ERROR, "cache lookup failed for type %u", typeOid);
type = (Form_pg_type) GETSTRUCT(tuple);
if (strcmp(NameStr(type->typname), "sparsevec") == 0)
result = HNSW_TYPE_SPARSEVEC;
else
result = HNSW_TYPE_VECTOR;
ReleaseSysCache(tuple);
return result;
}
/* /*
* Divide by the norm * Divide by the norm
* *
@@ -158,21 +187,40 @@ HnswOptionalProcInfo(Relation index, uint16 procnum)
* if it's different than the original value * if it's different than the original value
*/ */
bool bool
HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result) HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, HnswType type)
{ {
double norm = DatumGetFloat8(FunctionCall1Coll(procinfo, collation, *value)); double norm = DatumGetFloat8(FunctionCall1Coll(procinfo, collation, *value));
if (norm > 0) if (norm > 0)
{ {
Vector *v = DatumGetVector(*value); /* TODO Remove vector-specific code */
if (type == HNSW_TYPE_VECTOR)
{
Vector *v = DatumGetVector(*value);
Vector *result = InitVector(v->dim);
if (result == NULL) for (int i = 0; i < v->dim; i++)
result = InitVector(v->dim); result->x[i] = v->x[i] / norm;
for (int i = 0; i < v->dim; i++) *value = PointerGetDatum(result);
result->x[i] = v->x[i] / norm; }
else if (type == HNSW_TYPE_SPARSEVEC)
{
SparseVector *v = DatumGetSparseVector(*value);
SparseVector *result = InitSparseVector(v->dim, v->nnz);
float *vx = SPARSEVEC_VALUES(v);
float *rx = SPARSEVEC_VALUES(result);
*value = PointerGetDatum(result); for (int i = 0; i < v->nnz; i++)
{
result->indices[i] = v->indices[i];
rx[i] = vx[i] / norm;
}
*value = PointerGetDatum(result);
}
else
elog(ERROR, "Unsupported type");
return true; return true;
} }
@@ -180,6 +228,21 @@ HnswNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result)
return false; return false;
} }
/*
* Check if a value can be indexed
*/
void
HnswCheckValue(Datum value, HnswType type)
{
if (type == HNSW_TYPE_SPARSEVEC)
{
SparseVector *vec = DatumGetSparseVector(value);
if (vec->nnz > HNSW_MAX_NNZ)
elog(ERROR, "sparsevec cannot have more than %d non-zero elements for hnsw index", HNSW_MAX_NNZ);
}
}
/* /*
* New buffer * New buffer
*/ */
@@ -575,7 +638,12 @@ HnswLoadElement(HnswElement element, float *distance, Datum *q, Relation index,
/* Calculate distance */ /* Calculate distance */
if (distance != NULL) if (distance != NULL)
*distance = (float) DatumGetFloat8(FunctionCall2Coll(procinfo, collation, *q, PointerGetDatum(&etup->data))); {
if (DatumGetPointer(*q) == NULL)
*distance = 0;
else
*distance = (float) DatumGetFloat8(FunctionCall2Coll(procinfo, collation, *q, PointerGetDatum(&etup->data)));
}
UnlockReleaseBuffer(buf); UnlockReleaseBuffer(buf);
} }

View File

@@ -57,7 +57,7 @@ AddSample(Datum *values, IvfflatBuildState * buildstate)
*/ */
if (buildstate->kmeansnormprocinfo != NULL) if (buildstate->kmeansnormprocinfo != NULL)
{ {
if (!IvfflatNormValue(buildstate->kmeansnormprocinfo, buildstate->collation, &value, buildstate->normvec)) if (!IvfflatNormValue(buildstate->kmeansnormprocinfo, buildstate->collation, &value))
return; return;
} }
@@ -105,7 +105,7 @@ SampleCallback(Relation index, CALLBACK_ITEM_POINTER, Datum *values,
oldCtx = MemoryContextSwitchTo(buildstate->tmpCtx); oldCtx = MemoryContextSwitchTo(buildstate->tmpCtx);
/* Add sample */ /* Add sample */
AddSample(values, state); AddSample(values, buildstate);
/* Reset memory context */ /* Reset memory context */
MemoryContextSwitchTo(oldCtx); MemoryContextSwitchTo(oldCtx);
@@ -153,7 +153,7 @@ AddTupleToSort(Relation index, ItemPointer tid, Datum *values, IvfflatBuildState
/* Normalize if needed */ /* Normalize if needed */
if (buildstate->normprocinfo != NULL) if (buildstate->normprocinfo != NULL)
{ {
if (!IvfflatNormValue(buildstate->normprocinfo, buildstate->collation, &value, buildstate->normvec)) if (!IvfflatNormValue(buildstate->normprocinfo, buildstate->collation, &value))
return; return;
} }
@@ -356,9 +356,6 @@ InitBuildState(IvfflatBuildState * buildstate, Relation heap, Relation index, In
buildstate->centers = VectorArrayInit(buildstate->lists, buildstate->dimensions); buildstate->centers = VectorArrayInit(buildstate->lists, buildstate->dimensions);
buildstate->listInfo = palloc(sizeof(ListInfo) * buildstate->lists); buildstate->listInfo = palloc(sizeof(ListInfo) * buildstate->lists);
/* Reuse for each tuple */
buildstate->normvec = InitVector(buildstate->dimensions);
buildstate->tmpCtx = AllocSetContextCreate(CurrentMemoryContext, buildstate->tmpCtx = AllocSetContextCreate(CurrentMemoryContext,
"Ivfflat build temporary context", "Ivfflat build temporary context",
ALLOCSET_DEFAULT_SIZES); ALLOCSET_DEFAULT_SIZES);
@@ -380,7 +377,6 @@ FreeBuildState(IvfflatBuildState * buildstate)
{ {
VectorArrayFree(buildstate->centers); VectorArrayFree(buildstate->centers);
pfree(buildstate->listInfo); pfree(buildstate->listInfo);
pfree(buildstate->normvec);
#ifdef IVFFLAT_KMEANS_DEBUG #ifdef IVFFLAT_KMEANS_DEBUG
pfree(buildstate->listSums); pfree(buildstate->listSums);

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@@ -172,7 +172,6 @@ typedef struct IvfflatBuildState
VectorArray samples; VectorArray samples;
VectorArray centers; VectorArray centers;
ListInfo *listInfo; ListInfo *listInfo;
Vector *normvec;
#ifdef IVFFLAT_KMEANS_DEBUG #ifdef IVFFLAT_KMEANS_DEBUG
double inertia; double inertia;
@@ -267,7 +266,7 @@ void VectorArrayFree(VectorArray arr);
void PrintVectorArray(char *msg, VectorArray arr); void PrintVectorArray(char *msg, VectorArray arr);
void IvfflatKmeans(Relation index, VectorArray samples, VectorArray centers); void IvfflatKmeans(Relation index, VectorArray samples, VectorArray centers);
FmgrInfo *IvfflatOptionalProcInfo(Relation index, uint16 procnum); FmgrInfo *IvfflatOptionalProcInfo(Relation index, uint16 procnum);
bool IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result); bool IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value);
int IvfflatGetLists(Relation index); int IvfflatGetLists(Relation index);
void IvfflatGetMetaPageInfo(Relation index, int *lists, int *dimensions); void IvfflatGetMetaPageInfo(Relation index, int *lists, int *dimensions);
void IvfflatUpdateList(Relation index, ListInfo listInfo, BlockNumber insertPage, BlockNumber originalInsertPage, BlockNumber startPage, ForkNumber forkNum); void IvfflatUpdateList(Relation index, ListInfo listInfo, BlockNumber insertPage, BlockNumber originalInsertPage, BlockNumber startPage, ForkNumber forkNum);

View File

@@ -85,7 +85,7 @@ InsertTuple(Relation index, Datum *values, bool *isnull, ItemPointer heap_tid, R
normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_NORM_PROC); normprocinfo = IvfflatOptionalProcInfo(index, IVFFLAT_NORM_PROC);
if (normprocinfo != NULL) if (normprocinfo != NULL)
{ {
if (!IvfflatNormValue(normprocinfo, index->rd_indcollation[0], &value, NULL)) if (!IvfflatNormValue(normprocinfo, index->rd_indcollation[0], &value))
return; return;
} }

View File

@@ -293,7 +293,7 @@ ivfflatgettuple(IndexScanDesc scan, ScanDirection dir)
/* Fine if normalization fails */ /* Fine if normalization fails */
if (so->normprocinfo != NULL) if (so->normprocinfo != NULL)
IvfflatNormValue(so->normprocinfo, so->collation, &value, NULL); IvfflatNormValue(so->normprocinfo, so->collation, &value);
} }
IvfflatBench("GetScanLists", GetScanLists(scan, value)); IvfflatBench("GetScanLists", GetScanLists(scan, value));

View File

@@ -75,16 +75,14 @@ IvfflatOptionalProcInfo(Relation index, uint16 procnum)
* if it's different than the original value * if it's different than the original value
*/ */
bool bool
IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value, Vector * result) IvfflatNormValue(FmgrInfo *procinfo, Oid collation, Datum *value)
{ {
double norm = DatumGetFloat8(FunctionCall1Coll(procinfo, collation, *value)); double norm = DatumGetFloat8(FunctionCall1Coll(procinfo, collation, *value));
if (norm > 0) if (norm > 0)
{ {
Vector *v = DatumGetVector(*value); Vector *v = DatumGetVector(*value);
Vector *result = InitVector(v->dim);
if (result == NULL)
result = InitVector(v->dim);
for (int i = 0; i < v->dim; i++) for (int i = 0; i < v->dim; i++)
result->x[i] = v->x[i] / norm; result->x[i] = v->x[i] / norm;

779
src/sparsevec.c Normal file
View File

@@ -0,0 +1,779 @@
#include "postgres.h"
#include <limits.h>
#include <math.h>
#include "fmgr.h"
#include "libpq/pqformat.h"
#include "sparsevec.h"
#include "utils/array.h"
#include "utils/builtins.h"
#include "vector.h"
#if PG_VERSION_NUM >= 120000
#include "common/shortest_dec.h"
#include "utils/float.h"
#else
#include <float.h>
#include "utils/builtins.h"
#endif
/*
* Ensure same dimensions
*/
static inline void
CheckDims(SparseVector * a, SparseVector * b)
{
if (a->dim != b->dim)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("different sparsevec dimensions %d and %d", a->dim, b->dim)));
}
/*
* Ensure expected dimensions
*/
static inline void
CheckExpectedDim(int32 typmod, int dim)
{
if (typmod != -1 && typmod != dim)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("expected %d dimensions, not %d", typmod, dim)));
}
/*
* Ensure valid dimensions
*/
static inline void
CheckDim(int dim)
{
if (dim < 1)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("sparsevec must have at least 1 dimension")));
if (dim > SPARSEVEC_MAX_DIM)
ereport(ERROR,
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
errmsg("sparsevec cannot have more than %d dimensions", SPARSEVEC_MAX_DIM)));
}
/*
* Ensure valid nnz
*/
static inline void
CheckNnz(int nnz, int dim)
{
if (nnz < 0)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("sparsevec must have at least one element")));
if (nnz > dim)
ereport(ERROR,
(errcode(ERRCODE_PROGRAM_LIMIT_EXCEEDED),
errmsg("sparsevec cannot have more elements than dimensions")));
}
/*
* Ensure valid index
*/
static inline void
CheckIndex(int32 *indices, int i, int dim)
{
int32 index = indices[i];
if (index < 0)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("index must not be negative")));
if (index >= dim)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("index must be less than dimensions")));
if (i > 0)
{
if (index < indices[i - 1])
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("indexes must be in ascending order")));
if (index == indices[i - 1])
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("indexes must not contain duplicates")));
}
}
/*
* Ensure finite element
*/
static inline void
CheckElement(float value)
{
if (isnan(value))
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("NaN not allowed in sparsevec")));
if (isinf(value))
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("infinite value not allowed in sparsevec")));
}
/*
* Allocate and initialize a new sparse vector
*/
SparseVector *
InitSparseVector(int dim, int nnz)
{
SparseVector *result;
int size;
size = SPARSEVEC_SIZE(nnz);
result = (SparseVector *) palloc0(size);
SET_VARSIZE(result, size);
result->dim = dim;
result->nnz = nnz;
return result;
}
/*
* Check for whitespace, since array_isspace() is static
*/
static inline bool
sparsevec_isspace(char ch)
{
if (ch == ' ' ||
ch == '\t' ||
ch == '\n' ||
ch == '\r' ||
ch == '\v' ||
ch == '\f')
return true;
return false;
}
/*
* Convert textual representation to internal representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_in);
Datum
sparsevec_in(PG_FUNCTION_ARGS)
{
char *lit = PG_GETARG_CSTRING(0);
int32 typmod = PG_GETARG_INT32(2);
int dim;
char *pt;
char *stringEnd;
SparseVector *result;
float *rvalues;
char *litcopy = pstrdup(lit);
char *str = litcopy;
int32 *indices;
float *values;
int maxNnz;
int nnz = 0;
maxNnz = 1;
pt = str;
while (*pt != '\0')
{
if (*pt == ',')
maxNnz++;
pt++;
}
indices = palloc(maxNnz * sizeof(int32));
values = palloc(maxNnz * sizeof(float));
while (sparsevec_isspace(*str))
str++;
if (*str != '{')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("malformed sparsevec literal: \"%s\"", lit),
errdetail("Vector contents must start with \"{\".")));
str++;
pt = strtok(str, ",");
stringEnd = pt;
while (pt != NULL && *stringEnd != '}')
{
long index;
float value;
/* TODO Better error */
if (nnz == maxNnz)
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("ran out of buffer: \"%s\"", lit)));
while (sparsevec_isspace(*pt))
pt++;
/* Check for empty string like float4in */
if (*pt == '\0')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
/* Use similar logic as int2vectorin */
errno = 0;
index = strtol(pt, &stringEnd, 10);
if (stringEnd == pt)
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
if (errno == ERANGE || index < 0 || index > INT_MAX)
ereport(ERROR,
(errcode(ERRCODE_NUMERIC_VALUE_OUT_OF_RANGE),
errmsg("index \"%ld\" is out of range for type sparsevec", index)));
if (stringEnd == pt)
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
while (sparsevec_isspace(*stringEnd))
stringEnd++;
if (*stringEnd != ':')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
stringEnd++;
while (sparsevec_isspace(*stringEnd))
stringEnd++;
errno = 0;
pt = stringEnd;
value = strtof(pt, &stringEnd);
if (stringEnd == pt)
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
/* Check for range error like float4in */
if (errno == ERANGE && (value == 0 || isinf(value)))
ereport(ERROR,
(errcode(ERRCODE_NUMERIC_VALUE_OUT_OF_RANGE),
errmsg("\"%s\" is out of range for type sparsevec", pt)));
/* TODO Decide whether to store zero values */
if (value != 0)
{
indices[nnz] = index;
values[nnz] = value;
nnz++;
}
if (*stringEnd != '\0' && *stringEnd != '}')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
pt = strtok(NULL, ",");
}
if (stringEnd == NULL || *stringEnd != '}')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("malformed sparsevec literal: \"%s\"", lit),
errdetail("Unexpected end of input.")));
stringEnd++;
if (*stringEnd != '/')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("malformed sparsevec literal: \"%s\"", lit),
errdetail("Unexpected end of input.")));
stringEnd++;
/* Use similar logic as int2vectorin */
errno = 0;
pt = stringEnd;
dim = strtol(pt, &stringEnd, 10);
if (stringEnd == pt)
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("invalid input syntax for type sparsevec: \"%s\"", lit)));
/* Only whitespace is allowed after the closing brace */
while (sparsevec_isspace(*stringEnd))
stringEnd++;
if (*stringEnd != '\0')
ereport(ERROR,
(errcode(ERRCODE_INVALID_TEXT_REPRESENTATION),
errmsg("malformed sparsevec literal: \"%s\"", lit),
errdetail("Junk after closing.")));
pfree(litcopy);
CheckDim(dim);
CheckExpectedDim(typmod, dim);
result = InitSparseVector(dim, nnz);
rvalues = SPARSEVEC_VALUES(result);
for (int i = 0; i < nnz; i++)
{
result->indices[i] = indices[i];
rvalues[i] = values[i];
CheckIndex(result->indices, i, dim);
CheckElement(rvalues[i]);
}
PG_RETURN_POINTER(result);
}
#define AppendChar(ptr, c) (*(ptr)++ = (c))
#define AppendFloat(ptr, f) ((ptr) += float_to_shortest_decimal_bufn((f), (ptr)))
#if PG_VERSION_NUM >= 140000
#define AppendInt(ptr, i) ((ptr) += pg_ltoa((i), (ptr)))
#else
#define AppendInt(ptr, i) \
do { \
pg_ltoa(i, ptr); \
while (*ptr != '\0') \
ptr++; \
} while (0)
#endif
/*
* Convert internal representation to textual representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_out);
Datum
sparsevec_out(PG_FUNCTION_ARGS)
{
SparseVector *sparsevec = PG_GETARG_SPARSEVEC_P(0);
float *values = SPARSEVEC_VALUES(sparsevec);
char *buf;
char *ptr;
/*
* Need:
*
* nnz * 10 bytes for index (positive integer)
*
* nnz bytes for :
*
* nnz * (FLOAT_SHORTEST_DECIMAL_LEN - 1) bytes for
* float_to_shortest_decimal_bufn
*
* nnz - 1 bytes for ,
*
* 10 bytes for dimensions
*
* 4 bytes for {, }, /, and \0
*/
buf = (char *) palloc((11 + FLOAT_SHORTEST_DECIMAL_LEN) * sparsevec->nnz + 13);
ptr = buf;
AppendChar(ptr, '{');
for (int i = 0; i < sparsevec->nnz; i++)
{
if (i > 0)
AppendChar(ptr, ',');
AppendInt(ptr, sparsevec->indices[i]);
AppendChar(ptr, ':');
AppendFloat(ptr, values[i]);
}
AppendChar(ptr, '}');
AppendChar(ptr, '/');
AppendInt(ptr, sparsevec->dim);
*ptr = '\0';
PG_FREE_IF_COPY(sparsevec, 0);
PG_RETURN_CSTRING(buf);
}
/*
* Convert type modifier
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_typmod_in);
Datum
sparsevec_typmod_in(PG_FUNCTION_ARGS)
{
ArrayType *ta = PG_GETARG_ARRAYTYPE_P(0);
int32 *tl;
int n;
tl = ArrayGetIntegerTypmods(ta, &n);
if (n != 1)
ereport(ERROR,
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
errmsg("invalid type modifier")));
if (*tl < 1)
ereport(ERROR,
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
errmsg("dimensions for type sparsevec must be at least 1")));
if (*tl > SPARSEVEC_MAX_DIM)
ereport(ERROR,
(errcode(ERRCODE_INVALID_PARAMETER_VALUE),
errmsg("dimensions for type sparsevec cannot exceed %d", SPARSEVEC_MAX_DIM)));
PG_RETURN_INT32(*tl);
}
/*
* Convert external binary representation to internal representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_recv);
Datum
sparsevec_recv(PG_FUNCTION_ARGS)
{
StringInfo buf = (StringInfo) PG_GETARG_POINTER(0);
int32 typmod = PG_GETARG_INT32(2);
SparseVector *result;
int32 dim;
int32 nnz;
int32 unused;
float *values;
dim = pq_getmsgint(buf, sizeof(int32));
nnz = pq_getmsgint(buf, sizeof(int32));
unused = pq_getmsgint(buf, sizeof(int32));
CheckDim(dim);
CheckNnz(nnz, dim);
CheckExpectedDim(typmod, dim);
if (unused != 0)
ereport(ERROR,
(errcode(ERRCODE_DATA_EXCEPTION),
errmsg("expected unused to be 0, not %d", unused)));
result = InitSparseVector(dim, nnz);
values = SPARSEVEC_VALUES(result);
for (int i = 0; i < nnz; i++)
{
result->indices[i] = pq_getmsgint(buf, sizeof(int32));
CheckIndex(result->indices, i, dim);
}
for (int i = 0; i < nnz; i++)
{
values[i] = pq_getmsgfloat4(buf);
CheckElement(values[i]);
}
PG_RETURN_POINTER(result);
}
/*
* Convert internal representation to the external binary representation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_send);
Datum
sparsevec_send(PG_FUNCTION_ARGS)
{
SparseVector *svec = PG_GETARG_SPARSEVEC_P(0);
float *values = SPARSEVEC_VALUES(svec);
StringInfoData buf;
pq_begintypsend(&buf);
pq_sendint(&buf, svec->dim, sizeof(int32));
pq_sendint(&buf, svec->nnz, sizeof(int32));
pq_sendint(&buf, svec->unused, sizeof(int32));
for (int i = 0; i < svec->nnz; i++)
pq_sendint(&buf, svec->indices[i], sizeof(int32));
for (int i = 0; i < svec->nnz; i++)
pq_sendfloat4(&buf, values[i]);
PG_RETURN_BYTEA_P(pq_endtypsend(&buf));
}
/*
* Convert sparse vector to sparse vector
* This is needed to check the type modifier
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec);
Datum
sparsevec(PG_FUNCTION_ARGS)
{
SparseVector *svec = PG_GETARG_SPARSEVEC_P(0);
int32 typmod = PG_GETARG_INT32(1);
CheckExpectedDim(typmod, svec->dim);
PG_RETURN_POINTER(svec);
}
/*
* Convert dense vector to sparse vector
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(vector_to_sparsevec);
Datum
vector_to_sparsevec(PG_FUNCTION_ARGS)
{
Vector *vec = PG_GETARG_VECTOR_P(0);
int32 typmod = PG_GETARG_INT32(1);
SparseVector *result;
int dim = vec->dim;
int nnz = 0;
float *values;
int j = 0;
CheckDim(dim);
CheckExpectedDim(typmod, dim);
for (int i = 0; i < dim; i++)
{
if (vec->x[i] != 0)
nnz++;
}
result = InitSparseVector(dim, nnz);
values = SPARSEVEC_VALUES(result);
for (int i = 0; i < dim; i++)
{
if (vec->x[i] != 0)
{
/* Safety check */
if (j == nnz)
elog(ERROR, "safety check failed");
result->indices[j] = i;
values[j] = vec->x[i];
j++;
}
}
PG_RETURN_POINTER(result);
}
/*
* Get the L2 squared distance between sparse vectors
*/
static double
l2_distance_squared_internal(SparseVector * a, SparseVector * b)
{
float *ax = SPARSEVEC_VALUES(a);
float *bx = SPARSEVEC_VALUES(b);
double distance = 0.0;
int bpos = 0;
for (int i = 0; i < a->nnz; i++)
{
int ai = a->indices[i];
int bi = -1;
for (int j = bpos; j < b->nnz; j++)
{
bi = b->indices[j];
if (ai == bi)
{
double diff = ax[i] - bx[j];
distance += diff * diff;
}
else if (ai > bi)
distance += bx[j] * bx[j];
/* Update start for next iteration */
if (ai >= bi)
bpos = j + 1;
/* Found or passed it */
if (bi >= ai)
break;
}
if (ai != bi)
distance += ax[i] * ax[i];
}
for (int j = bpos; j < b->nnz; j++)
distance += bx[j] * bx[j];
return distance;
}
/*
* Get the L2 distance between sparse vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_l2_distance);
Datum
sparsevec_l2_distance(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
SparseVector *b = PG_GETARG_SPARSEVEC_P(1);
CheckDims(a, b);
PG_RETURN_FLOAT8(sqrt(l2_distance_squared_internal(a, b)));
}
/*
* Get the L2 squared distance between sparse vectors
* This saves a sqrt calculation
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_l2_squared_distance);
Datum
sparsevec_l2_squared_distance(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
SparseVector *b = PG_GETARG_SPARSEVEC_P(1);
CheckDims(a, b);
PG_RETURN_FLOAT8(l2_distance_squared_internal(a, b));
}
/*
* Get the inner product of two sparse vectors
*/
static double
inner_product_internal(SparseVector * a, SparseVector * b)
{
float *ax = SPARSEVEC_VALUES(a);
float *bx = SPARSEVEC_VALUES(b);
double distance = 0.0;
int bpos = 0;
for (int i = 0; i < a->nnz; i++)
{
int ai = a->indices[i];
for (int j = bpos; j < b->nnz; j++)
{
int bi = b->indices[j];
/* Only update when the same index */
if (ai == bi)
distance += ax[i] * bx[j];
/* Update start for next iteration */
if (ai >= bi)
bpos = j + 1;
/* Found or passed it */
if (bi >= ai)
break;
}
}
return distance;
}
/*
* Get the inner product of two sparse vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_inner_product);
Datum
sparsevec_inner_product(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
SparseVector *b = PG_GETARG_SPARSEVEC_P(1);
CheckDims(a, b);
PG_RETURN_FLOAT8(inner_product_internal(a, b));
}
/*
* Get the negative inner product of two sparse vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_negative_inner_product);
Datum
sparsevec_negative_inner_product(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
SparseVector *b = PG_GETARG_SPARSEVEC_P(1);
CheckDims(a, b);
PG_RETURN_FLOAT8(-inner_product_internal(a, b));
}
/*
* Get the cosine distance between two sparse vectors
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_cosine_distance);
Datum
sparsevec_cosine_distance(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
SparseVector *b = PG_GETARG_SPARSEVEC_P(1);
float *ax = SPARSEVEC_VALUES(a);
float *bx = SPARSEVEC_VALUES(b);
float norma = 0.0;
float normb = 0.0;
double similarity;
CheckDims(a, b);
similarity = inner_product_internal(a, b);
/* Auto-vectorized */
for (int i = 0; i < a->nnz; i++)
norma += ax[i] * ax[i];
/* Auto-vectorized */
for (int i = 0; i < b->nnz; i++)
normb += bx[i] * bx[i];
/* Use sqrt(a * b) over sqrt(a) * sqrt(b) */
similarity /= sqrt((double) norma * (double) normb);
#ifdef _MSC_VER
/* /fp:fast may not propagate NaN */
if (isnan(similarity))
PG_RETURN_FLOAT8(NAN);
#endif
/* Keep in range */
if (similarity > 1)
similarity = 1.0;
else if (similarity < -1)
similarity = -1.0;
PG_RETURN_FLOAT8(1.0 - similarity);
}
/*
* Get the L2 norm of a sparse vector
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_norm);
Datum
sparsevec_norm(PG_FUNCTION_ARGS)
{
SparseVector *a = PG_GETARG_SPARSEVEC_P(0);
float *ax = SPARSEVEC_VALUES(a);
double norm = 0.0;
/* Auto-vectorized */
for (int i = 0; i < a->nnz; i++)
norm += (double) ax[i] * (double) ax[i];
PG_RETURN_FLOAT8(sqrt(norm));
}

23
src/sparsevec.h Normal file
View File

@@ -0,0 +1,23 @@
#ifndef SPARSEVEC_H
#define SPARSEVEC_H
#define SPARSEVEC_MAX_DIM 100000
#define SPARSEVEC_SIZE(_nnz) (offsetof(SparseVector, indices) + MAXALIGN((_nnz) * sizeof(int32)) + (_nnz * sizeof(float)))
#define SPARSEVEC_VALUES(x) ((float *) (((char *) (x)) + offsetof(SparseVector, indices) + MAXALIGN((x)->nnz * sizeof(int32))))
#define DatumGetSparseVector(x) ((SparseVector *) PG_DETOAST_DATUM(x))
#define PG_GETARG_SPARSEVEC_P(x) DatumGetSparseVector(PG_GETARG_DATUM(x))
#define PG_RETURN_SPARSEVEC_P(x) PG_RETURN_POINTER(x)
typedef struct SparseVector
{
int32 vl_len_; /* varlena header (do not touch directly!) */
int32 dim; /* number of dimensions */
int32 nnz;
int32 unused;
int32 indices[FLEXIBLE_ARRAY_MEMBER];
} SparseVector;
SparseVector *InitSparseVector(int dim, int nnz);
#endif

View File

@@ -2,7 +2,6 @@
#include <math.h> #include <math.h>
#include "bitvector.h"
#include "catalog/pg_type.h" #include "catalog/pg_type.h"
#include "common/shortest_dec.h" #include "common/shortest_dec.h"
#include "fmgr.h" #include "fmgr.h"
@@ -11,6 +10,7 @@
#include "lib/stringinfo.h" #include "lib/stringinfo.h"
#include "libpq/pqformat.h" #include "libpq/pqformat.h"
#include "port.h" /* for strtof() */ #include "port.h" /* for strtof() */
#include "sparsevec.h"
#include "utils/array.h" #include "utils/array.h"
#include "utils/builtins.h" #include "utils/builtins.h"
#include "utils/float.h" #include "utils/float.h"
@@ -861,26 +861,6 @@ vector_mul(PG_FUNCTION_ARGS)
PG_RETURN_POINTER(result); PG_RETURN_POINTER(result);
} }
/*
* Quantize a vector
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(quantize_binary);
Datum
quantize_binary(PG_FUNCTION_ARGS)
{
Vector *a = PG_GETARG_VECTOR_P(0);
float *ax = a->x;
VarBit *result = InitBitVector(a->dim);
unsigned char *rx = VARBITS(result);
/* TODO Improve */
for (int i = 0; i < a->dim; i++)
rx[i / 8] |= (ax[i] > 0) << (7 - (i % 8));
PG_RETURN_VARBIT_P(result);
}
/* /*
* Internal helper to compare vectors * Internal helper to compare vectors
*/ */
@@ -1181,3 +1161,26 @@ vector_avg(PG_FUNCTION_ARGS)
PG_RETURN_POINTER(result); PG_RETURN_POINTER(result);
} }
/*
* Convert sparse vector to dense vector
*/
PGDLLEXPORT PG_FUNCTION_INFO_V1(sparsevec_to_vector);
Datum
sparsevec_to_vector(PG_FUNCTION_ARGS)
{
SparseVector *svec = PG_GETARG_SPARSEVEC_P(0);
int32 typmod = PG_GETARG_INT32(1);
Vector *result;
int dim = svec->dim;
float *values = SPARSEVEC_VALUES(svec);
CheckDim(dim);
CheckExpectedDim(typmod, dim);
result = InitVector(dim);
for (int i = 0; i < svec->nnz; i++)
result->x[svec->indices[i]] = values[i];
PG_RETURN_POINTER(result);
}

View File

@@ -1,64 +0,0 @@
SELECT hamming_distance(B'111', B'111');
hamming_distance
------------------
0
(1 row)
SELECT hamming_distance(B'111', B'110');
hamming_distance
------------------
1
(1 row)
SELECT hamming_distance(B'111', B'100');
hamming_distance
------------------
2
(1 row)
SELECT hamming_distance(B'111', B'000');
hamming_distance
------------------
3
(1 row)
SELECT hamming_distance(B'111', B'00');
ERROR: different bit lengths 3 and 2
SELECT jaccard_distance(B'1111', B'1111');
jaccard_distance
------------------
0
(1 row)
SELECT jaccard_distance(B'1111', B'1110');
jaccard_distance
------------------
0.25
(1 row)
SELECT jaccard_distance(B'1111', B'1100');
jaccard_distance
------------------
0.5
(1 row)
SELECT jaccard_distance(B'1111', B'1000');
jaccard_distance
------------------
0.75
(1 row)
SELECT jaccard_distance(B'1111', B'0000');
jaccard_distance
------------------
1
(1 row)
SELECT jaccard_distance(B'1100', B'1000');
jaccard_distance
------------------
0.5
(1 row)
SELECT jaccard_distance(B'1111', B'000');
ERROR: different bit lengths 4 and 3

View File

@@ -104,122 +104,110 @@ SELECT vector_norm('[3e37,4e37]')::real;
5e+37 5e+37
(1 row) (1 row)
SELECT l2_distance('[0,0]', '[3,4]'); SELECT l2_distance('[0,0]'::vector, '[3,4]');
l2_distance l2_distance
------------- -------------
5 5
(1 row) (1 row)
SELECT l2_distance('[0,0]', '[0,1]'); SELECT l2_distance('[0,0]'::vector, '[0,1]');
l2_distance l2_distance
------------- -------------
1 1
(1 row) (1 row)
SELECT l2_distance('[1,2]', '[3]'); SELECT l2_distance('[1,2]'::vector, '[3]');
ERROR: different vector dimensions 2 and 1 ERROR: different vector dimensions 2 and 1
SELECT l2_distance('[3e38]', '[-3e38]'); SELECT l2_distance('[3e38]'::vector, '[-3e38]');
l2_distance l2_distance
------------- -------------
Infinity Infinity
(1 row) (1 row)
SELECT inner_product('[1,2]', '[3,4]'); SELECT inner_product('[1,2]'::vector, '[3,4]');
inner_product inner_product
--------------- ---------------
11 11
(1 row) (1 row)
SELECT inner_product('[1,2]', '[3]'); SELECT inner_product('[1,2]'::vector, '[3]');
ERROR: different vector dimensions 2 and 1 ERROR: different vector dimensions 2 and 1
SELECT inner_product('[3e38]', '[3e38]'); SELECT inner_product('[3e38]'::vector, '[3e38]');
inner_product inner_product
--------------- ---------------
Infinity Infinity
(1 row) (1 row)
SELECT cosine_distance('[1,2]', '[2,4]'); SELECT cosine_distance('[1,2]'::vector, '[2,4]');
cosine_distance cosine_distance
----------------- -----------------
0 0
(1 row) (1 row)
SELECT cosine_distance('[1,2]', '[0,0]'); SELECT cosine_distance('[1,2]'::vector, '[0,0]');
cosine_distance cosine_distance
----------------- -----------------
NaN NaN
(1 row) (1 row)
SELECT cosine_distance('[1,1]', '[1,1]'); SELECT cosine_distance('[1,1]'::vector, '[1,1]');
cosine_distance cosine_distance
----------------- -----------------
0 0
(1 row) (1 row)
SELECT cosine_distance('[1,0]', '[0,2]'); SELECT cosine_distance('[1,0]'::vector, '[0,2]');
cosine_distance cosine_distance
----------------- -----------------
1 1
(1 row) (1 row)
SELECT cosine_distance('[1,1]', '[-1,-1]'); SELECT cosine_distance('[1,1]'::vector, '[-1,-1]');
cosine_distance cosine_distance
----------------- -----------------
2 2
(1 row) (1 row)
SELECT cosine_distance('[1,2]', '[3]'); SELECT cosine_distance('[1,2]'::vector, '[3]');
ERROR: different vector dimensions 2 and 1 ERROR: different vector dimensions 2 and 1
SELECT cosine_distance('[1,1]', '[1.1,1.1]'); SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]');
cosine_distance cosine_distance
----------------- -----------------
0 0
(1 row) (1 row)
SELECT cosine_distance('[1,1]', '[-1.1,-1.1]'); SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]');
cosine_distance cosine_distance
----------------- -----------------
2 2
(1 row) (1 row)
SELECT cosine_distance('[3e38]', '[3e38]'); SELECT cosine_distance('[3e38]'::vector, '[3e38]');
cosine_distance cosine_distance
----------------- -----------------
NaN NaN
(1 row) (1 row)
SELECT l1_distance('[0,0]', '[3,4]'); SELECT l1_distance('[0,0]'::vector, '[3,4]');
l1_distance l1_distance
------------- -------------
7 7
(1 row) (1 row)
SELECT l1_distance('[0,0]', '[0,1]'); SELECT l1_distance('[0,0]'::vector, '[0,1]');
l1_distance l1_distance
------------- -------------
1 1
(1 row) (1 row)
SELECT l1_distance('[1,2]', '[3]'); SELECT l1_distance('[1,2]'::vector, '[3]');
ERROR: different vector dimensions 2 and 1 ERROR: different vector dimensions 2 and 1
SELECT l1_distance('[3e38]', '[-3e38]'); SELECT l1_distance('[3e38]'::vector, '[-3e38]');
l1_distance l1_distance
------------- -------------
Infinity Infinity
(1 row) (1 row)
SELECT quantize_binary('[1,0,-1]');
quantize_binary
-----------------
100
(1 row)
SELECT quantize_binary('[0,0.1,-0.2,-0.3,0.4,0.5,0.6,-0.7,0.8,-0.9,1]');
quantize_binary
-----------------
01001110101
(1 row)
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v; SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v;
avg avg
----------- -----------

View File

@@ -1,21 +0,0 @@
SET enable_seqscan = off;
CREATE TABLE t (val bit(3));
INSERT INTO t (val) VALUES (B'000'), (B'100'), (B'111'), (NULL);
CREATE INDEX ON t USING hnsw (val bit_hamming_ops);
INSERT INTO t (val) VALUES (B'110');
SELECT * FROM t ORDER BY val <~> B'111';
val
-----
111
110
100
000
(4 rows)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <~> (SELECT NULL::bit)) t2;
count
-------
4
(1 row)
DROP TABLE t;

View File

@@ -1,21 +0,0 @@
SET enable_seqscan = off;
CREATE TABLE t (val bit(4));
INSERT INTO t (val) VALUES (B'0000'), (B'1100'), (B'1111'), (NULL);
CREATE INDEX ON t USING hnsw (val bit_jaccard_ops);
INSERT INTO t (val) VALUES (B'1110');
SELECT * FROM t ORDER BY val <%> B'1111';
val
------
1111
1110
1100
0000
(4 rows)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <%> (SELECT NULL::bit)) t2;
count
-------
4
(1 row)
DROP TABLE t;

View File

@@ -12,14 +12,11 @@ SELECT * FROM t ORDER BY val <-> '[3,3,3]';
[0,0,0] [0,0,0]
(4 rows) (4 rows)
SELECT * FROM t ORDER BY val <-> (SELECT NULL::vector); SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <-> (SELECT NULL::vector)) t2;
val count
--------- -------
[0,0,0] 4
[1,1,1] (1 row)
[1,2,3]
[1,2,4]
(4 rows)
SELECT COUNT(*) FROM t; SELECT COUNT(*) FROM t;
count count

View File

@@ -0,0 +1,26 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_cosine_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <=> '{0:3,1:3,2:3}/3';
val
-----------------
{0:1,1:1,2:1}/3
{0:1,1:2,2:3}/3
{0:1,1:2,2:4}/3
(3 rows)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <=> '{}/3') t2;
count
-------
3
(1 row)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <=> (SELECT NULL::sparsevec)) t2;
count
-------
3
(1 row)
DROP TABLE t;

View File

@@ -0,0 +1,21 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_ip_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <#> '{0:3,1:3,2:3}/3';
val
-----------------
{0:1,1:2,2:4}/3
{0:1,1:2,2:3}/3
{0:1,1:1,2:1}/3
{}/3
(4 rows)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <#> (SELECT NULL::sparsevec)) t2;
count
-------
4
(1 row)
DROP TABLE t;

View File

@@ -0,0 +1,43 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <-> '{0:3,1:3,2:3}/3';
val
-----------------
{0:1,1:2,2:3}/3
{0:1,1:2,2:4}/3
{0:1,1:1,2:1}/3
{}/3
(4 rows)
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <-> (SELECT NULL::sparsevec)) t2;
count
-------
4
(1 row)
SELECT COUNT(*) FROM t;
count
-------
5
(1 row)
TRUNCATE t;
SELECT * FROM t ORDER BY val <-> '{0:3,1:3,2:3}/3';
val
-----
(0 rows)
DROP TABLE t;
-- TODO move
CREATE TABLE t (val sparsevec(1001));
INSERT INTO t (val) VALUES (array_fill(1, ARRAY[1001])::vector::sparsevec);
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
ERROR: sparsevec cannot have more than 1000 non-zero elements for hnsw index
TRUNCATE t;
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
INSERT INTO t (val) VALUES (array_fill(1, ARRAY[1001])::vector::sparsevec);
ERROR: sparsevec cannot have more than 1000 non-zero elements for hnsw index
DROP TABLE t;

View File

@@ -66,6 +66,22 @@ SELECT '[4e38,1]'::vector;
ERROR: infinite value not allowed in vector ERROR: infinite value not allowed in vector
LINE 1: SELECT '[4e38,1]'::vector; LINE 1: SELECT '[4e38,1]'::vector;
^ ^
SELECT '[-4e38,1]'::vector;
ERROR: infinite value not allowed in vector
LINE 1: SELECT '[-4e38,1]'::vector;
^
SELECT '[1e-46,1]'::vector;
vector
--------
[0,1]
(1 row)
SELECT '[-1e-46,1]'::vector;
vector
--------
[-0,1]
(1 row)
SELECT '[1,2,3'::vector; SELECT '[1,2,3'::vector;
ERROR: malformed vector literal: "[1,2,3" ERROR: malformed vector literal: "[1,2,3"
LINE 1: SELECT '[1,2,3'::vector; LINE 1: SELECT '[1,2,3'::vector;

View File

@@ -0,0 +1,62 @@
SELECT l2_distance('{}/2'::sparsevec, '{0:3,1:4}/2');
l2_distance
-------------
5
(1 row)
SELECT l2_distance('{}/2'::sparsevec, '{1:1}/2');
l2_distance
-------------
1
(1 row)
SELECT '{}/2'::sparsevec <-> '{0:3,1:4}/2';
?column?
----------
5
(1 row)
SELECT inner_product('{0:1,1:2}/2'::sparsevec, '{0:2,1:4}/2');
inner_product
---------------
10
(1 row)
SELECT sparsevec_negative_inner_product('{0:1,1:2}/2', '{0:2,1:4}/2');
sparsevec_negative_inner_product
----------------------------------
-10
(1 row)
SELECT cosine_distance('{0:1,1:2}/2'::sparsevec, '{0:2,1:4}/2');
cosine_distance
-----------------
0
(1 row)
SELECT cosine_distance('{0:1,1:2}/2'::sparsevec, '{}/2');
cosine_distance
-----------------
NaN
(1 row)
SELECT cosine_distance('{0:1,1:1}/2'::sparsevec, '{0:-1,1:-1}/2');
cosine_distance
-----------------
2
(1 row)
SELECT cosine_distance('{0:1}/2'::sparsevec, '{1:2}/2');
cosine_distance
-----------------
1
(1 row)
SELECT cosine_distance('{}/1'::sparsevec, '{}/1');
cosine_distance
-----------------
NaN
(1 row)
SELECT cosine_distance('{0:1}/2'::sparsevec, '{0:1}/3');
ERROR: different sparsevec dimensions 2 and 3

View File

@@ -0,0 +1,62 @@
SELECT '{0:1.5,2:3.5}/5'::sparsevec;
sparsevec
-----------------
{0:1.5,2:3.5}/5
(1 row)
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector;
vector
-----------------
[1.5,0,3.5,0,0]
(1 row)
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector(5);
vector
-----------------
[1.5,0,3.5,0,0]
(1 row)
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector(4);
ERROR: expected 4 dimensions, not 5
SELECT '[0,1.5,0,3.5,0]'::vector::sparsevec;
sparsevec
-----------------
{1:1.5,3:3.5}/5
(1 row)
SELECT '{0:0,1:1,2:0}/3'::sparsevec;
sparsevec
-----------
{1:1}/3
(1 row)
SELECT '{1:1,0:1}/2'::sparsevec;
ERROR: indexes must be in ascending order
LINE 1: SELECT '{1:1,0:1}/2'::sparsevec;
^
SELECT '{}/5'::sparsevec;
sparsevec
-----------
{}/5
(1 row)
SELECT '{}/-1'::sparsevec;
ERROR: sparsevec must have at least 1 dimension
LINE 1: SELECT '{}/-1'::sparsevec;
^
SELECT '{}/100001'::sparsevec;
ERROR: sparsevec cannot have more than 100000 dimensions
LINE 1: SELECT '{}/100001'::sparsevec;
^
SELECT '{}/16001'::sparsevec::vector;
ERROR: vector cannot have more than 16000 dimensions
SELECT '{-1:1}/1'::sparsevec;
ERROR: index "-1" is out of range for type sparsevec
LINE 1: SELECT '{-1:1}/1'::sparsevec;
^
SELECT '{1:1}/1'::sparsevec;
ERROR: index must be less than dimensions
LINE 1: SELECT '{1:1}/1'::sparsevec;
^
SELECT '{}/1'::sparsevec(2);
ERROR: expected 2 dimensions, not 1

View File

@@ -1,13 +0,0 @@
SELECT hamming_distance(B'111', B'111');
SELECT hamming_distance(B'111', B'110');
SELECT hamming_distance(B'111', B'100');
SELECT hamming_distance(B'111', B'000');
SELECT hamming_distance(B'111', B'00');
SELECT jaccard_distance(B'1111', B'1111');
SELECT jaccard_distance(B'1111', B'1110');
SELECT jaccard_distance(B'1111', B'1100');
SELECT jaccard_distance(B'1111', B'1000');
SELECT jaccard_distance(B'1111', B'0000');
SELECT jaccard_distance(B'1100', B'1000');
SELECT jaccard_distance(B'1111', B'000');

View File

@@ -24,32 +24,29 @@ SELECT vector_norm('[3,4]');
SELECT vector_norm('[0,1]'); SELECT vector_norm('[0,1]');
SELECT vector_norm('[3e37,4e37]')::real; SELECT vector_norm('[3e37,4e37]')::real;
SELECT l2_distance('[0,0]', '[3,4]'); SELECT l2_distance('[0,0]'::vector, '[3,4]');
SELECT l2_distance('[0,0]', '[0,1]'); SELECT l2_distance('[0,0]'::vector, '[0,1]');
SELECT l2_distance('[1,2]', '[3]'); SELECT l2_distance('[1,2]'::vector, '[3]');
SELECT l2_distance('[3e38]', '[-3e38]'); SELECT l2_distance('[3e38]'::vector, '[-3e38]');
SELECT inner_product('[1,2]', '[3,4]'); SELECT inner_product('[1,2]'::vector, '[3,4]');
SELECT inner_product('[1,2]', '[3]'); SELECT inner_product('[1,2]'::vector, '[3]');
SELECT inner_product('[3e38]', '[3e38]'); SELECT inner_product('[3e38]'::vector, '[3e38]');
SELECT cosine_distance('[1,2]', '[2,4]'); SELECT cosine_distance('[1,2]'::vector, '[2,4]');
SELECT cosine_distance('[1,2]', '[0,0]'); SELECT cosine_distance('[1,2]'::vector, '[0,0]');
SELECT cosine_distance('[1,1]', '[1,1]'); SELECT cosine_distance('[1,1]'::vector, '[1,1]');
SELECT cosine_distance('[1,0]', '[0,2]'); SELECT cosine_distance('[1,0]'::vector, '[0,2]');
SELECT cosine_distance('[1,1]', '[-1,-1]'); SELECT cosine_distance('[1,1]'::vector, '[-1,-1]');
SELECT cosine_distance('[1,2]', '[3]'); SELECT cosine_distance('[1,2]'::vector, '[3]');
SELECT cosine_distance('[1,1]', '[1.1,1.1]'); SELECT cosine_distance('[1,1]'::vector, '[1.1,1.1]');
SELECT cosine_distance('[1,1]', '[-1.1,-1.1]'); SELECT cosine_distance('[1,1]'::vector, '[-1.1,-1.1]');
SELECT cosine_distance('[3e38]', '[3e38]'); SELECT cosine_distance('[3e38]'::vector, '[3e38]');
SELECT l1_distance('[0,0]', '[3,4]'); SELECT l1_distance('[0,0]'::vector, '[3,4]');
SELECT l1_distance('[0,0]', '[0,1]'); SELECT l1_distance('[0,0]'::vector, '[0,1]');
SELECT l1_distance('[1,2]', '[3]'); SELECT l1_distance('[1,2]'::vector, '[3]');
SELECT l1_distance('[3e38]', '[-3e38]'); SELECT l1_distance('[3e38]'::vector, '[-3e38]');
SELECT quantize_binary('[1,0,-1]');
SELECT quantize_binary('[0,0.1,-0.2,-0.3,0.4,0.5,0.6,-0.7,0.8,-0.9,1]');
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v; SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]']) v;
SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]', NULL]) v; SELECT avg(v) FROM unnest(ARRAY['[1,2,3]'::vector, '[3,5,7]', NULL]) v;

View File

@@ -1,12 +0,0 @@
SET enable_seqscan = off;
CREATE TABLE t (val bit(3));
INSERT INTO t (val) VALUES (B'000'), (B'100'), (B'111'), (NULL);
CREATE INDEX ON t USING hnsw (val bit_hamming_ops);
INSERT INTO t (val) VALUES (B'110');
SELECT * FROM t ORDER BY val <~> B'111';
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <~> (SELECT NULL::bit)) t2;
DROP TABLE t;

View File

@@ -1,12 +0,0 @@
SET enable_seqscan = off;
CREATE TABLE t (val bit(4));
INSERT INTO t (val) VALUES (B'0000'), (B'1100'), (B'1111'), (NULL);
CREATE INDEX ON t USING hnsw (val bit_jaccard_ops);
INSERT INTO t (val) VALUES (B'1110');
SELECT * FROM t ORDER BY val <%> B'1111';
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <%> (SELECT NULL::bit)) t2;
DROP TABLE t;

View File

@@ -7,7 +7,7 @@ CREATE INDEX ON t USING hnsw (val vector_l2_ops);
INSERT INTO t (val) VALUES ('[1,2,4]'); INSERT INTO t (val) VALUES ('[1,2,4]');
SELECT * FROM t ORDER BY val <-> '[3,3,3]'; SELECT * FROM t ORDER BY val <-> '[3,3,3]';
SELECT * FROM t ORDER BY val <-> (SELECT NULL::vector); SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <-> (SELECT NULL::vector)) t2;
SELECT COUNT(*) FROM t; SELECT COUNT(*) FROM t;
TRUNCATE t; TRUNCATE t;

View File

@@ -0,0 +1,13 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_cosine_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <=> '{0:3,1:3,2:3}/3';
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <=> '{}/3') t2;
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <=> (SELECT NULL::sparsevec)) t2;
DROP TABLE t;

View File

@@ -0,0 +1,12 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_ip_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <#> '{0:3,1:3,2:3}/3';
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <#> (SELECT NULL::sparsevec)) t2;
DROP TABLE t;

View File

@@ -0,0 +1,25 @@
SET enable_seqscan = off;
CREATE TABLE t (val sparsevec(3));
INSERT INTO t (val) VALUES ('{}/3'), ('{0:1,1:2,2:3}/3'), ('{0:1,1:1,2:1}/3'), (NULL);
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
INSERT INTO t (val) VALUES ('{0:1,1:2,2:4}/3');
SELECT * FROM t ORDER BY val <-> '{0:3,1:3,2:3}/3';
SELECT COUNT(*) FROM (SELECT * FROM t ORDER BY val <-> (SELECT NULL::sparsevec)) t2;
SELECT COUNT(*) FROM t;
TRUNCATE t;
SELECT * FROM t ORDER BY val <-> '{0:3,1:3,2:3}/3';
DROP TABLE t;
-- TODO move
CREATE TABLE t (val sparsevec(1001));
INSERT INTO t (val) VALUES (array_fill(1, ARRAY[1001])::vector::sparsevec);
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
TRUNCATE t;
CREATE INDEX ON t USING hnsw (val sparsevec_l2_ops);
INSERT INTO t (val) VALUES (array_fill(1, ARRAY[1001])::vector::sparsevec);
DROP TABLE t;

View File

@@ -11,6 +11,9 @@ SELECT '[1.5e38,-1.5e38]'::vector;
SELECT '[1.5e+38,-1.5e+38]'::vector; SELECT '[1.5e+38,-1.5e+38]'::vector;
SELECT '[1.5e-38,-1.5e-38]'::vector; SELECT '[1.5e-38,-1.5e-38]'::vector;
SELECT '[4e38,1]'::vector; SELECT '[4e38,1]'::vector;
SELECT '[-4e38,1]'::vector;
SELECT '[1e-46,1]'::vector;
SELECT '[-1e-46,1]'::vector;
SELECT '[1,2,3'::vector; SELECT '[1,2,3'::vector;
SELECT '[1,2,3]9'::vector; SELECT '[1,2,3]9'::vector;
SELECT '1,2,3'::vector; SELECT '1,2,3'::vector;

View File

@@ -0,0 +1,13 @@
SELECT l2_distance('{}/2'::sparsevec, '{0:3,1:4}/2');
SELECT l2_distance('{}/2'::sparsevec, '{1:1}/2');
SELECT '{}/2'::sparsevec <-> '{0:3,1:4}/2';
SELECT inner_product('{0:1,1:2}/2'::sparsevec, '{0:2,1:4}/2');
SELECT sparsevec_negative_inner_product('{0:1,1:2}/2', '{0:2,1:4}/2');
SELECT cosine_distance('{0:1,1:2}/2'::sparsevec, '{0:2,1:4}/2');
SELECT cosine_distance('{0:1,1:2}/2'::sparsevec, '{}/2');
SELECT cosine_distance('{0:1,1:1}/2'::sparsevec, '{0:-1,1:-1}/2');
SELECT cosine_distance('{0:1}/2'::sparsevec, '{1:2}/2');
SELECT cosine_distance('{}/1'::sparsevec, '{}/1');
SELECT cosine_distance('{0:1}/2'::sparsevec, '{0:1}/3');

View File

@@ -0,0 +1,19 @@
SELECT '{0:1.5,2:3.5}/5'::sparsevec;
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector;
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector(5);
SELECT '{0:1.5,2:3.5}/5'::sparsevec::vector(4);
SELECT '[0,1.5,0,3.5,0]'::vector::sparsevec;
SELECT '{0:0,1:1,2:0}/3'::sparsevec;
SELECT '{1:1,0:1}/2'::sparsevec;
SELECT '{}/5'::sparsevec;
SELECT '{}/-1'::sparsevec;
SELECT '{}/100001'::sparsevec;
SELECT '{}/16001'::sparsevec::vector;
SELECT '{-1:1}/1'::sparsevec;
SELECT '{1:1}/1'::sparsevec;
SELECT '{}/1'::sparsevec(2);

View File

@@ -86,7 +86,7 @@ foreach (@queries)
push(@expected, $res); push(@expected, $res);
} }
test_recall(0.20, $limit, "before vacuum"); test_recall(0.19, $limit, "before vacuum");
test_recall(0.95, 100, "before vacuum"); test_recall(0.95, 100, "before vacuum");
# TODO Test concurrent inserts with vacuum # TODO Test concurrent inserts with vacuum

View File

@@ -1,137 +0,0 @@
use strict;
use warnings;
use PostgresNode;
use TestLib;
use Test::More;
my $node;
my @queries = ();
my @expected;
my $limit = 20;
my $dim = 52;
my $max = 2**$dim;
sub test_recall
{
my ($min, $operator) = @_;
my $correct = 0;
my $total = 0;
my $explain = $node->safe_psql("postgres", qq(
SET enable_seqscan = off;
SET hnsw.ef_search = 100;
EXPLAIN ANALYZE SELECT i FROM tst ORDER BY v $operator $queries[0] LIMIT $limit;
));
like($explain, qr/Index Scan/);
for my $i (0 .. $#queries)
{
my $actual = $node->safe_psql("postgres", qq(
SET enable_seqscan = off;
SET hnsw.ef_search = 100;
SELECT i FROM tst ORDER BY v $operator $queries[$i] LIMIT $limit;
));
my @actual_ids = split("\n", $actual);
my @expected_ids = split("\n", $expected[$i]);
my %expected_set = map { $_ => 1 } @expected_ids;
foreach (@actual_ids)
{
if (exists($expected_set{$_}))
{
$correct++;
}
}
$total += $limit;
}
cmp_ok($correct / $total, ">=", $min, $operator);
}
# Initialize node
$node = get_new_node('node');
$node->init;
$node->start;
# Create table
$node->safe_psql("postgres", "CREATE EXTENSION vector;");
$node->safe_psql("postgres", "CREATE TABLE tst (i int4, v bit($dim));");
$node->safe_psql("postgres",
"INSERT INTO tst SELECT i, (random() * $max)::bigint::bit($dim) FROM generate_series(1, 10000) i;"
);
# Generate queries
for (1 .. 20)
{
my $r = int(rand() * $max);
push(@queries, "${r}::bigint::bit($dim)");
}
# Check each index type
my @operators = ("<~>", "<\%>");
my @opclasses = ("bit_hamming_ops", "bit_jaccard_ops");
for my $i (0 .. $#operators)
{
my $operator = $operators[$i];
my $opclass = $opclasses[$i];
# Get exact results
@expected = ();
foreach (@queries)
{
# Handle ties
my $res = $node->safe_psql("postgres", qq(
WITH top AS (
SELECT v $operator $_ AS distance FROM tst ORDER BY v $operator $_ LIMIT $limit
)
SELECT i FROM tst WHERE (v $operator $_) <= (SELECT MAX(distance) FROM top)
));
push(@expected, $res);
}
# Build index serially
$node->safe_psql("postgres", qq(
SET max_parallel_maintenance_workers = 0;
CREATE INDEX idx ON tst USING hnsw (v $opclass);
));
# Test approximate results
my $min = $operator eq "<\%>" ? 0.96 : 0.99;
test_recall($min, $operator);
$node->safe_psql("postgres", "DROP INDEX idx;");
# Build index in parallel in memory
my ($ret, $stdout, $stderr) = $node->psql("postgres", qq(
SET client_min_messages = DEBUG;
SET min_parallel_table_scan_size = 1;
CREATE INDEX idx ON tst USING hnsw (v $opclass);
));
is($ret, 0, $stderr);
like($stderr, qr/using \d+ parallel workers/);
# Test approximate results
test_recall($min, $operator);
$node->safe_psql("postgres", "DROP INDEX idx;");
# Build index in parallel on disk
# Set parallel_workers on table to use workers with low maintenance_work_mem
($ret, $stdout, $stderr) = $node->psql("postgres", qq(
ALTER TABLE tst SET (parallel_workers = 2);
SET client_min_messages = DEBUG;
SET maintenance_work_mem = '4MB';
CREATE INDEX idx ON tst USING hnsw (v $opclass);
ALTER TABLE tst RESET (parallel_workers);
));
is($ret, 0, $stderr);
like($stderr, qr/using \d+ parallel workers/);
like($stderr, qr/hnsw graph no longer fits into maintenance_work_mem/);
$node->safe_psql("postgres", "DROP INDEX idx;");
}
done_testing();