Added support for bit vectors to HNSW

src/bitvector.c

@@ -0,0 +1,90 @@
+#include "postgres.h"
+
+#include "bitvector.h"
+#include "port/pg_bitutils.h"
+#include "utils/varbit.h"
+
+#if PG_VERSION_NUM >= 160000
+#include "varatt.h"
+#endif
+
+/*
+ * Allocate and initialize a new bit vector
+ */
+VarBit *
+InitBitVector(int dim)
+{
+	VarBit	   *result;
+	int			size;
+
+	size = VARBITTOTALLEN(dim);
+	result = (VarBit *) palloc0(size);
+	SET_VARSIZE(result, size);
+	VARBITLEN(result) = dim;
+
+	return result;
+}
+
+/*
+ * Ensure same number of bits
+ */
+static inline void
+CheckDims(VarBit *a, VarBit *b)
+{
+	if (VARBITLEN(a) != VARBITLEN(b))
+		ereport(ERROR,
+				(errcode(ERRCODE_DATA_EXCEPTION),
+				 errmsg("different bit lengths %u and %u", VARBITLEN(a), VARBITLEN(b))));
+}
+
+/*
+ * Get the Hamming distance between two bit strings
+ */
+PGDLLEXPORT PG_FUNCTION_INFO_V1(hamming_distance);
+Datum
+hamming_distance(PG_FUNCTION_ARGS)
+{
+	VarBit	   *a = PG_GETARG_VARBIT_P(0);
+	VarBit	   *b = PG_GETARG_VARBIT_P(1);
+	unsigned char *ax = VARBITS(a);
+	unsigned char *bx = VARBITS(b);
+	uint64		distance = 0;
+
+	CheckDims(a, b);
+
+	/* TODO Improve performance */
+	for (uint32 i = 0; i < VARBITBYTES(a); i++)
+		distance += pg_number_of_ones[ax[i] ^ bx[i]];
+
+	PG_RETURN_FLOAT8((double) distance);
+}
+
+/*
+ * Get the Jaccard distance between two bit strings
+ */
+PGDLLEXPORT PG_FUNCTION_INFO_V1(jaccard_distance);
+Datum
+jaccard_distance(PG_FUNCTION_ARGS)
+{
+	VarBit	   *a = PG_GETARG_VARBIT_P(0);
+	VarBit	   *b = PG_GETARG_VARBIT_P(1);
+	unsigned char *ax = VARBITS(a);
+	unsigned char *bx = VARBITS(b);
+	uint64		ab = 0;
+	uint64		aa;
+	uint64		bb;
+
+	CheckDims(a, b);
+
+	/* TODO Improve performance */
+	for (uint32 i = 0; i < VARBITBYTES(a); i++)
+		ab += pg_number_of_ones[ax[i] & bx[i]];
+
+	if (ab == 0)
+		PG_RETURN_FLOAT8(1);
+
+	aa = pg_popcount((char *) ax, VARBITBYTES(a));
+	bb = pg_popcount((char *) bx, VARBITBYTES(b));
+
+	PG_RETURN_FLOAT8(1 - (ab / ((double) (aa + bb - ab))));
+}